Citrus Sinensis ID: 001706
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1024 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.899 | 0.924 | 0.441 | 0.0 | |
| P47735 | 999 | Receptor-like protein kin | no | no | 0.889 | 0.911 | 0.428 | 0.0 | |
| C0LGX3 | 993 | LRR receptor-like serine/ | no | no | 0.885 | 0.913 | 0.415 | 0.0 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.890 | 0.930 | 0.364 | 1e-160 | |
| Q9M0G7 | 1013 | Leucine-rich repeat recep | no | no | 0.929 | 0.939 | 0.361 | 1e-159 | |
| Q9FII5 | 1041 | Leucine-rich repeat recep | no | no | 0.897 | 0.882 | 0.362 | 1e-158 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.899 | 0.918 | 0.372 | 1e-155 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.911 | 0.847 | 0.354 | 1e-155 | |
| Q9FRS6 | 1029 | Leucine-rich repeat recep | no | no | 0.919 | 0.915 | 0.359 | 1e-155 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.894 | 0.914 | 0.366 | 1e-151 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/967 (44%), Positives = 587/967 (60%), Gaps = 46/967 (4%)
Query: 35 EERTILLNLKQQLGNPPS-LQSWTST-SSPCDWPEITCT--FNSVTGISLRHKDITQKIP 90
++ IL +K L +P S L SW S +SPC W ++C F+SVT + L ++ P
Sbjct: 18 QDGFILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFP 77
Query: 91 PIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCI 150
+IC L NL + L +NSI P + C LQ LDLSQN G +P + I L +
Sbjct: 78 SVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHL 137
Query: 151 DLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAM 210
DL GNNFSGDIP S G+ L+ L L N +GT P +G++S L++L L+YN F P+
Sbjct: 138 DLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNP-FSPSR 196
Query: 211 IPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLT 270
IP EFG L L+ +W+TE +L+G+IP+++ LS L L L N L G IP L L N+
Sbjct: 197 IPPEFGNLTNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVV 256
Query: 271 QLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGE 329
Q+ LY+N L+GEIP + LK L +D SMN LTG IP+E ++ L+ L L+ N+L GE
Sbjct: 257 QIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP-LESLNLYENNLEGE 315
Query: 330 VPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQ 389
+PASI P L + ++F N L+G LP ++GL+S L +VS N+FSG LP +LCA G L+
Sbjct: 316 LPASIALSPNLYEIRIFGNRLTGGLPKDLGLNSPLRWLDVSENEFSGDLPADLCAKGELE 375
Query: 390 GVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGE 449
++ N+ SG +P+SL +CR+L ++L NRFSG +PTG W +++ L L +N+ SGE
Sbjct: 376 ELLIIHNSFSGVIPESLADCRSLTRIRLAYNRFSGSVPTGFWGLPHVNLLELVNNSFSGE 435
Query: 450 LPSKT--AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507
+ A NL+ L +SNN F+G + +GS NL AS N FSG +P L SL L
Sbjct: 436 ISKSIGGASNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELG 495
Query: 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 567
TL L GN+ SG+L S I SW LN LNLA NE +G+IP IGSL V+ LDLSGN FSG+
Sbjct: 496 TLDLHGNQFSGELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGK 555
Query: 568 IPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFR 627
IP + LKLN NLS N+L G++P Y +SF+ N LC I L C S
Sbjct: 556 IPVSLQSLKLNQLNLSYNRLSGDLPPSLAKDMYKNSFIGNPGLC--GDIKGL--CGSENE 611
Query: 628 NSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLGFTES 687
+ L I VLA +VLL V+ +F R ++ R + + W L SFH+LGF+E
Sbjct: 612 AKKRGYVWLLRSIFVLAAMVLLAGVAWFYFKYR-TFKKARAMERSKWTLMSFHKLGFSEH 670
Query: 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNN-----------RKLNQKLEK 736
IL SL E N+IG+G SG+VY++ + GE VAVKR+W + ++
Sbjct: 671 EILESLDEDNVIGAGASGKVYKVVLTN-GETVAVKRLWTGSVKETGDCDPEKGYKPGVQD 729
Query: 737 E-FIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS 795
E F AE+E LG IRH NIVKLWCC S+ + KLLVYEYM N SL LH K +
Sbjct: 730 EAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM------ 783
Query: 796 VHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855
L W TR +I + AA+GL Y+HHD P I+HRD+KS+NIL+D ++ A++ADFG+AK
Sbjct: 784 -----LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAK 838
Query: 856 MLAKQGE-PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYG 911
+ G+ P +MS +AGS GY APEYAYT +VNEK DIYSFGVV+LE+VT K + G
Sbjct: 839 AVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELG 898
Query: 912 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971
++ L +W ++K I +D + + C+ EE++ + + L+CTS LP +RPSM+
Sbjct: 899 EK--DLVKWVCSTL-DQKGIEHVIDPKL-DSCFKEEISKILNVGLLCTSPLPINRPSMRR 954
Query: 972 VLQILRR 978
V+++L+
Sbjct: 955 VVKMLQE 961
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|P47735|RLK5_ARATH Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/977 (42%), Positives = 578/977 (59%), Gaps = 66/977 (6%)
Query: 35 EERTILLNLKQQLGNPP-SLQSWTSTS--SPCDWPEITCTFNS-VTGISLRHKDITQKIP 90
++ TIL K L +P SL SW+ + +PC W ++C S V + L + P
Sbjct: 23 QDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCDATSNVVSVDLSSFMLVGPFP 82
Query: 91 PIICDLKNLTTIDLSSNSIPGEFPEFLYN-CTKLQNLDLSQNYFVGPIPSDID-RISGLQ 148
I+C L +L ++ L +NSI G ++ C L +LDLS+N VG IP + + L+
Sbjct: 83 SILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLDLSENLLVGSIPKSLPFNLPNLK 142
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
+++ GNN S IP S G +L++L L N +GT P +G+++ L+ L LAYN F P
Sbjct: 143 FLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLSGTIPASLGNVTTLKELKLAYNL-FSP 201
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN 268
+ IP + G L +L+ LW+ NL+G IP ++S L+SL L L N L G+IPS + L
Sbjct: 202 SQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSLVNLDLTFNQLTGSIPSWITQLKT 261
Query: 269 LTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
+ Q+ L++N SGE+P S+ + L D SMN LTG IP+ L L LF N L
Sbjct: 262 VEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNLLNLESLN-LFENMLE 320
Query: 328 GEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387
G +P SI + L + K+FNN L+GVLP ++G +S L+ ++S N+FSG +P N+C G
Sbjct: 321 GPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYNRFSGEIPANVCGEGK 380
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
L+ ++ +N+ SG + +LG C++L V+L +N+ SG++P G W LS L LSDN+ +
Sbjct: 381 LEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIPHGFWGLPRLSLLELSDNSFT 440
Query: 448 GELPSKT--AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSH 505
G +P A NL+ L IS NRFSG I +GS +I + N FSGEIP L L
Sbjct: 441 GSIPKTIIGAKNLSNLRISKNRFSGSIPNEIGSLNGIIEISGAENDFSGEIPESLVKLKQ 500
Query: 506 LNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
L+ L L N+LSG++P ++ W +LN LNLA N LSGEIPK +G L V+ LDLS NQFS
Sbjct: 501 LSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIPKEVGILPVLNYLDLSSNQFS 560
Query: 566 GEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSR 625
GEIP E+ LKLN NLS N L G IP + N Y F+ N LCV +L +
Sbjct: 561 GEIPLELQNLKLNVLNLSYNHLSGKIPPLYANKIYAHDFIGNPGLCV-----DLDGLCRK 615
Query: 626 FRNSDKISSKHLAL-ILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLGF 684
S I + L I +LA LV +V + + R LR ++ A K SFH+L F
Sbjct: 616 ITRSKNIGYVWILLTIFLLAGLVFVVGIVMFIAKCRK-LRALKSSTLAASKWRSFHKLHF 674
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRI----------WNNRKLNQKL 734
+E I L E N+IG G SG+VY++++ G GE VAVK++ +++ LN+ +
Sbjct: 675 SEHEIADCLDEKNVIGFGSSGKVYKVELRG-GEVVAVKKLNKSVKGGDDEYSSDSLNRDV 733
Query: 735 EKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSS 794
F AE+E LGTIRH +IV+LWCC SS + KLLVYEYM N SL LHG ++ V
Sbjct: 734 ---FAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGV---- 786
Query: 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
VL WP RL+IA+ AA+GL Y+HHDC P I+HRDVKSSNILLDS++ AK+ADFG+A
Sbjct: 787 -----VLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIA 841
Query: 855 KMLAKQGE--PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE---AN 909
K+ G P MS +AGS GY APEY YT +VNEK DIYSFGVVLLELVTGK+ +
Sbjct: 842 KVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSE 901
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPC--------YLEEMTTVYRLALICTST 961
GD+ +A+W + ALDK EP + EE++ V + L+CTS
Sbjct: 902 LGDK--DMAKW----------VCTALDKCGLEPVIDPKLDLKFKEEISKVIHIGLLCTSP 949
Query: 962 LPSSRPSMKEVLQILRR 978
LP +RPSM++V+ +L+
Sbjct: 950 LPLNRPSMRKVVIMLQE 966
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Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGX3|HSL2_ARATH LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/979 (41%), Positives = 564/979 (57%), Gaps = 72/979 (7%)
Query: 44 KQQLGNPP-SLQSWTSTS---SPCDWPEITCTFN-----SVTGISLRHKDITQKIPPIIC 94
K +L +P +LQ W T SPC+W ITC +VT I L +I+ P C
Sbjct: 36 KTRLFDPDGNLQDWVITGDNRSPCNWTGITCHIRKGSSLAVTTIDLSGYNISGGFPYGFC 95
Query: 95 DLKNLTTIDLSSNSIPGEFPEF-LYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153
++ L I LS N++ G L C+KLQNL L+QN F G +P L+ ++L
Sbjct: 96 RIRTLINITLSQNNLNGTIDSAPLSLCSKLQNLILNQNNFSGKLPEFSPEFRKLRVLELE 155
Query: 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI 213
N F+G+IP+S GRL+ LQ L L N +G P +G L+ L L LAY S F P+ IP
Sbjct: 156 SNLFTGEIPQSYGRLTALQVLNLNGNPLSGIVPAFLGYLTELTRLDLAYIS-FDPSPIPS 214
Query: 214 EFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLF 273
G L L L +T +NL+GEIP+++ NL LE L L N L G IP + L ++ Q+
Sbjct: 215 TLGNLSNLTDLRLTHSNLVGEIPDSIMNLVLLENLDLAMNSLTGEIPESIGRLESVYQIE 274
Query: 274 LYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332
LYDN LSG++P S+ L +L + D+S NNLTG +PE+ L+ L L N +G +P
Sbjct: 275 LYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKIAALQ-LISFNLNDNFFTGGLPD 333
Query: 333 SIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVV 392
+ P L +FK+FNNS +G LP +G S + F+VSTN+FSG LP LC LQ ++
Sbjct: 334 VVALNPNLVEFKIFNNSFTGTLPRNLGKFSEISEFDVSTNRFSGELPPYLCYRRKLQKII 393
Query: 393 AFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNT-ISGELP 451
F N LSG +P+S G+C +L +++ N+ SGE+P W L+ L L++N + G +P
Sbjct: 394 TFSNQLSGEIPESYGDCHSLNYIRMADNKLSGEVPARFWE-LPLTRLELANNNQLQGSIP 452
Query: 452 SK--TAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTL 509
A +L++LEIS N FSG I + ++L V S N F G IP + L +L +
Sbjct: 453 PSISKARHLSQLEISANNFSGVIPVKLCDLRDLRVIDLSRNSFLGSIPSCINKLKNLERV 512
Query: 510 LLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 569
+ N L G++PS + S T L LNL+ N L G IP +G L V+ LDLS NQ +GEIP
Sbjct: 513 EMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGIPPELGDLPVLNYLDLSNNQLTGEIP 572
Query: 570 PEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNS 629
E+ +LKLN FN+S NKLYG IP F + SFL N NLC N P P R
Sbjct: 573 AELLRLKLNQFNVSDNKLYGKIPSGFQQDIFRPSFLGNPNLCAPNLD---PIRPCR---- 625
Query: 630 DKISSKHLALILVLAILVLLVTVSLSWFVVRD--CLRRKRNRDPATWKLTSFHQLGFTES 687
K ++++ I +L I+ L T +L W ++ +RK R T K+T F ++GFTE
Sbjct: 626 SKRETRYILPISILCIVAL--TGALVWLFIKTKPLFKRKPKR---TNKITIFQRVGFTEE 680
Query: 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+I LTE N+IGSGGSG VYR+ + +G+ +AVK++W + E F +E+E LG
Sbjct: 681 DIYPQLTEDNIIGSGGSGLVYRVKLK-SGQTLAVKKLWGETGQKTESESVFRSEVETLGR 739
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV--LHWPT 805
+RH NIVKL C + E + LVYE+MEN SL LH K H+ V L W T
Sbjct: 740 VRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKE---------HRAVSPLDWTT 790
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH- 864
R IA+GAAQGL Y+HHD P I+HRDVKS+NILLD E K ++ADFGLAK L ++
Sbjct: 791 RFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGV 850
Query: 865 ---TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEAN---YGD------ 912
+MS VAGS+GY APEY YT+KVNEK D+YSFGVVLLEL+TGK N +G+
Sbjct: 851 SDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVK 910
Query: 913 --------------EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALIC 958
E ++ + + +Y + + D K ++ Y EE+ V +AL+C
Sbjct: 911 FAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMK-LSTREY-EEIEKVLDVALLC 968
Query: 959 TSTLPSSRPSMKEVLQILR 977
TS+ P +RP+M++V+++L+
Sbjct: 969 TSSFPINRPTMRKVVELLK 987
|
Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 351/964 (36%), Positives = 552/964 (57%), Gaps = 52/964 (5%)
Query: 39 ILLNLKQQLGNPPS--LQSWTSTSSP---CDWPEITCTFNS-VTGISLRHKDITQKIPPI 92
+LLNLK + P L W +SSP C + ++C ++ V +++ + I P
Sbjct: 30 VLLNLKSSMIGPKGHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPE 89
Query: 93 ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN-YFVGPIPSDIDR-ISGLQCI 150
I L +L + L++N+ GE P + + T L+ L++S N G P +I + + L+ +
Sbjct: 90 IGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVL 149
Query: 151 DLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAM 210
D NNF+G +P + L +L+ L N F+G P+ GD+ +LE LGL N
Sbjct: 150 DTYNNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGL--NGAGLSGK 207
Query: 211 IPIEFGMLKKLKTLWMTEAN-LIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNL 269
P LK L+ +++ N G +P L+ LEIL + L G IP+ L L +L
Sbjct: 208 SPAFLSRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTSLSNLKHL 267
Query: 270 TQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
LFL+ N L+G IP + L L +DLS+N LTG IP+ F L N+ L+ LF N+L G
Sbjct: 268 HTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINLFRNNLYG 327
Query: 329 EVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
++P +IG++P L+ F+V+ N+ + LP +G + L +VS N +G +P++LC G L
Sbjct: 328 QIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLIKLDVSDNHLTGLIPKDLCRGEKL 387
Query: 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISG 448
+ ++ N G +P+ LG C++L +++ N +G +P GL+ ++ + L+DN SG
Sbjct: 388 EMLILSNNFFFGPIPEELGKCKSLTKIRIVKNLLNGTVPAGLFNLPLVTIIELTDNFFSG 447
Query: 449 ELPSKTAWN-LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507
ELP + + L ++ +SNN FSG+I +G++ NL N F G IP E+ L HL+
Sbjct: 448 ELPVTMSGDVLDQIYLSNNWFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPREIFELKHLS 507
Query: 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 567
+ N ++G +P I ++L +++L+RN ++GEIPK I ++ + +L++SGNQ +G
Sbjct: 508 RINTSANNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGS 567
Query: 568 IPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDD-SFLNNSNLCVKNPIINLPKCPSR 625
IP IG + L T +LS N L G +P L +++ SF N+ LC+ + + CP+R
Sbjct: 568 IPTGIGNMTSLTTLDLSFNDLSGRVPLGGQFLVFNETSFAGNTYLCLPHRV----SCPTR 623
Query: 626 -----FRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFH 680
N + S +I V+A + L+ +S++ +R + +K+N+ WKLT+F
Sbjct: 624 PGQTSDHNHTALFSPSRIVITVIAAITGLILISVA---IRQ-MNKKKNQKSLAWKLTAFQ 679
Query: 681 QLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA 740
+L F ++L L E N+IG GG+G VYR + + VA+KR+ + + + F A
Sbjct: 680 KLDFKSEDVLECLKEENIIGKGGAGIVYRGSMPNNVD-VAIKRLVG--RGTGRSDHGFTA 736
Query: 741 EIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800
EI+ LG IRH +IV+L ++++++ LL+YEYM N SL LHG K
Sbjct: 737 EIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH----------- 785
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L W TR ++A+ AA+GLCY+HHDC+P I+HRDVKS+NILLDS+F+A +ADFGLAK L
Sbjct: 786 LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDG 845
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE--ANYGDEHTSLA 918
MS++AGS+GY APEYAYT KV+EK D+YSFGVVLLEL+ GK+ +G E +
Sbjct: 846 AASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFG-EGVDIV 904
Query: 919 EWAWRHYAEE--KPITDALDKGIAEPCY----LEEMTTVYRLALICTSTLPSSRPSMKEV 972
W R+ EE +P A+ I +P L + V+++A++C ++RP+M+EV
Sbjct: 905 RWV-RNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREV 963
Query: 973 LQIL 976
+ +L
Sbjct: 964 VHML 967
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 361/998 (36%), Positives = 550/998 (55%), Gaps = 46/998 (4%)
Query: 10 KIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPS-LQSW--TSTSSPCDWP 66
KI V + + V+ N E ++LL++K L +P + L+ W + TS C+W
Sbjct: 4 KIIVLFLYYCYIGSTSSVLASIDNVNELSVLLSVKSTLVDPLNFLKDWKLSDTSDHCNWT 63
Query: 67 EITCTFN-SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
+ C N +V + L ++T KI I L +L + ++S N P+ + L++
Sbjct: 64 GVRCNSNGNVEKLDLAGMNLTGKISDSISQLSSLVSFNISCNGFESLLPK---SIPPLKS 120
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
+D+SQN F G + + GL ++ GNN SG++ +G L L+ L L N F G+
Sbjct: 121 IDISQNSFSGSLFLFSNESLGLVHLNASGNNLSGNLTEDLGNLVSLEVLDLRGNFFQGSL 180
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL 245
P +L L LGL+ N+ +P G L L+T + G IP N++SL
Sbjct: 181 PSSFKNLQKLRFLGLSGNN--LTGELPSVLGQLPSLETAILGYNEFKGPIPPEFGNINSL 238
Query: 246 EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTG 304
+ L L L G IPS L L +L L LY+N +G IP + ++ L +D S N LTG
Sbjct: 239 KYLDLAIGKLSGEIPSELGKLKSLETLLLYENNFTGTIPREIGSITTLKVLDFSDNALTG 298
Query: 305 SIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSAL 364
IP E KLKNLQLL L N LSG +P +I + L+ +++NN+LSG LP ++G +S L
Sbjct: 299 EIPMEITKLKNLQLLNLMRNKLSGSIPPAISSLAQLQVLELWNNTLSGELPSDLGKNSPL 358
Query: 365 EGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG 424
+ +VS+N FSG +P LC G L ++ F N +G +P +L C++L V++ +N +G
Sbjct: 359 QWLDVSSNSFSGEIPSTLCNKGNLTKLILFNNTFTGQIPATLSTCQSLVRVRMQNNLLNG 418
Query: 425 ELPTGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFSGQIQRGVGSWKNL 482
+P G L L L+ N +SG +P + +L+ ++ S N+ + + S NL
Sbjct: 419 SIPIGFGKLEKLQRLELAGNRLSGGIPGDISDSVSLSFIDFSRNQIRSSLPSTILSIHNL 478
Query: 483 IVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG 542
F ++N SGE+P + L+ L L N L+G +PS I S L +LNL N L+G
Sbjct: 479 QAFLVADNFISGEVPDQFQDCPSLSNLDLSSNTLTGTIPSSIASCEKLVSLNLRNNNLTG 538
Query: 543 EIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIP-DEFNNLAY 600
EIP+ I ++ + LDLS N +G +P IG L N+S NKL G +P + F
Sbjct: 539 EIPRQITTMSALAVLDLSNNSLTGVLPESIGTSPALELLNVSYNKLTGPVPINGFLKTIN 598
Query: 601 DDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKH-----------LALILVLAILVLL 649
D NS LC LP C R + SS H +A +L L IL ++
Sbjct: 599 PDDLRGNSGLCGG----VLPPCSKFQRATSSHSSLHGKRIVAGWLIGIASVLALGILTIV 654
Query: 650 V-TVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVY 708
T+ W+ C ++ W+L +FH+LGFT S+IL+ + ESN+IG G +G VY
Sbjct: 655 TRTLYKKWYSNGFCGDETASKGEWPWRLMAFHRLGFTASDILACIKESNMIGMGATGIVY 714
Query: 709 RIDINGAGEFVAVKRIWNN-RKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767
+ +++ + +AVK++W + + +F+ E+ +LG +RH NIV+L + ++ + +
Sbjct: 715 KAEMSRSSTVLAVKKLWRSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLLGFLYNDKNMM 774
Query: 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ 827
+VYE+M N +L +HG+ ++ + ++ W +R IA+G A GL Y+HHDC P
Sbjct: 775 IVYEFMLNGNLGDAIHGK--------NAAGRLLVDWVSRYNIALGVAHGLAYLHHDCHPP 826
Query: 828 IIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVN 887
+IHRD+KS+NILLD+ A+IADFGLA+M+A++ E T+S VAGS+GY APEY YT KV+
Sbjct: 827 VIHRDIKSNNILLDANLDARIADFGLARMMARKKE--TVSMVAGSYGYIAPEYGYTLKVD 884
Query: 888 EKIDIYSFGVVLLELVTGK---EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCY 944
EKIDIYS+GVVLLEL+TG+ E +G E + EW R + + +ALD + Y
Sbjct: 885 EKIDIYSYGVVLLELLTGRRPLEPEFG-ESVDIVEWVRRKIRDNISLEEALDPNVGNCRY 943
Query: 945 L-EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
+ EEM V ++AL+CT+ LP RPSM++V+ +L P
Sbjct: 944 VQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAKP 981
|
Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust.
Identities = 358/988 (36%), Positives = 541/988 (54%), Gaps = 69/988 (6%)
Query: 48 GNPPSLQSW------TSTSSPCDWPEITC--TFNSVTGISLRHKDITQKIPPIICDLKNL 99
G P + Q W + + C W + C V + L H++++ +IP I L +L
Sbjct: 48 GPPSAFQDWKVPVNGQNDAVWCSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQIRYLSSL 107
Query: 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSG 159
++LS NS+ G FP +++ TKL LD+S+N F P I ++ L+ + NNF G
Sbjct: 108 LYLNLSGNSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEG 167
Query: 160 DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLK 219
+P + RL L+ L + F G P G L L+ + LA N +P G+L
Sbjct: 168 LLPSDVSRLRFLEELNFGGSYFEGEIPAAYGGLQRLKFIHLA--GNVLGGKLPPRLGLLT 225
Query: 220 KLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNIL 279
+L+ + + + G IP + LS+L+ ++ L G++P L L+NL LFL+ N
Sbjct: 226 ELQHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGF 285
Query: 280 SGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIP 338
+GEIP S LK L +D S N L+GSIP F LKNL L L SN+LSGEVP IG++P
Sbjct: 286 TGEIPESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELP 345
Query: 339 ALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNL 398
L ++NN+ +GVLP ++G + LE +VS N F+G +P +LC G L ++ F N
Sbjct: 346 ELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMF 405
Query: 399 SGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK--TAW 456
G +PKSL C +L + +NR +G +P G + NL+ + LS+N + ++P+ TA
Sbjct: 406 EGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNNRFTDQIPADFATAP 465
Query: 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKL 516
L L +S N F ++ + NL +F AS + GEIP + L GN L
Sbjct: 466 VLQYLNLSTNFFHRKLPENIWKAPNLQIFSASFSNLIGEIP-NYVGCKSFYRIELQGNSL 524
Query: 517 SGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK 576
+G +P I L LNL++N L+G IP I +L + +DLS N +G IP + G K
Sbjct: 525 NGTIPWDIGHCEKLLCLNLSQNHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSSK 584
Query: 577 -LNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFR--NSDKIS 633
+ TFN+S N+L G IP F +N LC ++ P RF N+D I
Sbjct: 585 TITTFNVSYNQLIGPIPSGSFAHLNPSFFSSNEGLC--GDLVGKPCNSDRFNAGNAD-ID 641
Query: 634 SKHL---------ALILVLAILVLLVTVSLSWFVV---RDCLRRKR-NR---------DP 671
H A++ +LA + + +FV+ C ++ NR D
Sbjct: 642 GHHKEERPKKTAGAIVWILA-----AAIGVGFFVLVAATRCFQKSYGNRVDGGGRNGGDI 696
Query: 672 ATWKLTSFHQLGFTESNILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL 730
WKLT+F +L FT +++ L+++ N++G G +G VY+ ++ GE +AVK++W K
Sbjct: 697 GPWKLTAFQRLNFTADDVVECLSKTDNILGMGSTGTVYKAEMPN-GEIIAVKKLWGKNKE 755
Query: 731 NQKLEKE---FIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKR 787
N K+ + +AE+++LG +RH NIV+L C ++ + +L+YEYM N SLD LHG +
Sbjct: 756 NGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDK 815
Query: 788 SLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847
++ + + W QIAIG AQG+CY+HHDC P I+HRD+K SNILLD++F+A+
Sbjct: 816 TMTAAA--------EWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEAR 867
Query: 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK- 906
+ADFG+AK++ +MS VAGS+GY APEYAYT +V++K DIYS+GV+LLE++TGK
Sbjct: 868 VADFGVAKLIQTD---ESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKR 924
Query: 907 --EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYL--EEMTTVYRLALICTSTL 962
E +G E S+ +W ++ + + LDK + C L EEM + R+AL+CTS
Sbjct: 925 SVEPEFG-EGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRS 983
Query: 963 PSSRPSMKEVLQILRRCCPTENYGGKKM 990
P+ RP M++VL IL+ P G +
Sbjct: 984 PTDRPPMRDVLLILQEAKPKRKTVGDNV 1011
|
Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust.
Identities = 361/968 (37%), Positives = 540/968 (55%), Gaps = 47/968 (4%)
Query: 32 PNTEERTILLNLKQQL------GNPPSLQSWTSTSSPCDWPEITCTFNS--VTGISLRHK 83
P +E R LL+LK L N P L SW ++S C W +TC + VT + L
Sbjct: 22 PISEFRA-LLSLKTSLTGAGDDKNSP-LSSWKVSTSFCTWIGVTCDVSRRHVTSLDLSGL 79
Query: 84 DITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR 143
+++ + P + L+ L + L+ N I G P + + + L++L+LS N F G P +I
Sbjct: 80 NLSGTLSPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHLNLSNNVFNGSFPDEISS 139
Query: 144 -ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAY 202
+ L+ +D+ NN +GD+P S+ L++L+ L+L N F G P G +E L A
Sbjct: 140 GLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYGSWPVIEYL--AV 197
Query: 203 NSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE-IPEAMSNLSSLEILALNGNH--LEGAI 259
+ N IP E G L L+ L++ N + +P + NLS E++ +G + L G I
Sbjct: 198 SGNELVGKIPPEIGNLTTLRELYIGYYNAFEDGLPPEIGNLS--ELVRFDGANCGLTGEI 255
Query: 260 PSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQL 318
P + L L LFL N+ SG + + L L +DLS N TG IP F +LKNL L
Sbjct: 256 PPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASFAELKNLTL 315
Query: 319 LGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPL 378
L LF N L GE+P IG +P L+ +++ N+ +G +P ++G + L ++S+N+ +G L
Sbjct: 316 LNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLSSNKLTGTL 375
Query: 379 PENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSS 438
P N+C+G L+ ++ N L G++P SLG C +L +++ N +G +P GL+ L+
Sbjct: 376 PPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKGLFGLPKLTQ 435
Query: 439 LMLSDNTISGELP--SKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEI 496
+ L DN +SGELP + NL ++ +SNN+ SG + +G++ + N F G I
Sbjct: 436 VELQDNYLSGELPVAGGVSVNLGQISLSNNQLSGPLPPAIGNFTGVQKLLLDGNKFQGPI 495
Query: 497 PVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVS 556
P E+ L L+ + N SG++ +I L ++L+RNELSGEIP I ++ ++
Sbjct: 496 PSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGEIPNEITAMKILNY 555
Query: 557 LDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPD--EFNNLAYDDSFLNNSNLCVK 613
L+LS N G IP I ++ L + + S N L G +P +F+ Y SFL N +LC
Sbjct: 556 LNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYT-SFLGNPDLC-- 612
Query: 614 NPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRR--KRNRDP 671
P + K S L+ + L +++ L+ S+++ VV R K+ +
Sbjct: 613 GPYLGPCKDGVAKGGHQSHSKGPLSASMKLLLVLGLLVCSIAFAVVAIIKARSLKKASES 672
Query: 672 ATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN 731
W+LT+F +L FT ++L SL E N+IG GG+G VY+ + G+ VAVKR+ +
Sbjct: 673 RAWRLTAFQRLDFTCDDVLDSLKEDNIIGKGGAGIVYK-GVMPNGDLVAVKRLAAMSR-G 730
Query: 732 QKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVS 791
+ F AEI+ LG IRH +IV+L S+ + LLVYEYM N SL LHG+K
Sbjct: 731 SSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGH-- 788
Query: 792 GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851
LHW TR +IA+ AA+GLCY+HHDC+P I+HRDVKS+NILLDS F+A +ADF
Sbjct: 789 ---------LHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADF 839
Query: 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE--AN 909
GLAK L G MSA+AGS+GY APEYAYT KV+EK D+YSFGVVLLELVTG++
Sbjct: 840 GLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGE 899
Query: 910 YGDEHTSLAEWAWRHYAEEK-PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS 968
+GD + +W + K + LD ++ + E+T V+ +A++C RP+
Sbjct: 900 FGDG-VDIVQWVRKMTDSNKDSVLKVLDPRLSS-IPIHEVTHVFYVAMLCVEEQAVERPT 957
Query: 969 MKEVLQIL 976
M+EV+QIL
Sbjct: 958 MREVVQIL 965
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 388/1094 (35%), Positives = 554/1094 (50%), Gaps = 161/1094 (14%)
Query: 15 LILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPS-LQSWTS-TSSPCDWPEITCT- 71
L +++L S F ++ +S N E R +LL K L + L SW S+PC+W I CT
Sbjct: 8 LAIVILCSFSF-ILVRSLNEEGR-VLLEFKAFLNDSNGYLASWNQLDSNPCNWTGIACTH 65
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+VT + L +++ + P+IC L L +++S+N I G P+ L C L+ LDL N
Sbjct: 66 LRTVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQDLSLCRSLEVLDLCTN 125
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNE----------- 180
F G IP + I L+ + L N G IPR IG LS LQ L +Y N
Sbjct: 126 RFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIPPSMAK 185
Query: 181 -------------FNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMT 227
F+G P EI +L+VLGLA N +P + L+ L L +
Sbjct: 186 LRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLA--ENLLEGSLPKQLEKLQNLTDLILW 243
Query: 228 EANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV 287
+ L GEIP ++ N+S LE+LAL+ N+ G+IP + L + +L+LY N L+GEIP +
Sbjct: 244 QNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREI 303
Query: 288 EAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI--------- 337
L +ID S N LTG IP+EFG + NL+LL LF N L G +P +G++
Sbjct: 304 GNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLS 363
Query: 338 ---------------PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENL 382
P L ++F+N L G +PP IG +S ++S N SGP+P +
Sbjct: 364 INRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHF 423
Query: 383 CAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGL------------ 430
C L + N LSG +P+ L C++L + L N+ +G LP L
Sbjct: 424 CRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELH 483
Query: 431 --WTTFNLSS----------LMLSDNTISGELPSKTAWNLT------------------- 459
W + N+S+ L L++N +GE+P + NLT
Sbjct: 484 QNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIG-NLTKIVGFNISSNQLTGHIPKE 542
Query: 460 --------RLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
RL++S N+FSG I + +G L + + S+N +GEIP L+ L L L
Sbjct: 543 LGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQL 602
Query: 512 DGNKLSGKLPSQIVSWTSLN-NLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP 570
GN LS +P ++ TSL +LN++ N LSG IP ++G+L ++ L L+ N+ SGEIP
Sbjct: 603 GGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPA 662
Query: 571 EIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDS-FLNNSNLCVKN-----PIINLPKCP 623
IG L L N+S+N L G +PD D S F N LC P++ P
Sbjct: 663 SIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCNSQRSHCQPLV--PHSD 720
Query: 624 SRFR---NSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTS-- 678
S+ N + +V+ + L+ + L W + R R+PA L
Sbjct: 721 SKLNWLINGSQRQKILTITCIVIGSVFLITFLGLCWTIKR--------REPAFVALEDQT 772
Query: 679 ---------FHQLGFTESNILSS---LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWN 726
F + GFT ++ + +E ++G G G VY+ +++G GE +AVK++ N
Sbjct: 773 KPDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSG-GEVIAVKKL-N 830
Query: 727 NRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLH-GR 785
+R + F AEI LG IRH NIVKL+ +NS LL+YEYM SL L G
Sbjct: 831 SRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGE 890
Query: 786 KRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845
K L L W R +IA+GAA+GLCY+HHDC PQI+HRD+KS+NILLD F+
Sbjct: 891 KNCL-----------LDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQ 939
Query: 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
A + DFGLAK++ +MSAVAGS+GY APEYAYT KV EK DIYSFGVVLLEL+TG
Sbjct: 940 AHVGDFGLAKLI-DLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITG 998
Query: 906 K-EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIA--EPCYLEEMTTVYRLALICTSTL 962
K ++ L W R P + D + + + EM+ V ++AL CTS
Sbjct: 999 KPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDARLDTNDKRTVHEMSLVLKIALFCTSNS 1058
Query: 963 PSSRPSMKEVLQIL 976
P+SRP+M+EV+ ++
Sbjct: 1059 PASRPTMREVVAMI 1072
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FRS6|PXL1_ARATH Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 361/1003 (35%), Positives = 542/1003 (54%), Gaps = 61/1003 (6%)
Query: 24 PFEVIPQSPNTEERTILLNLKQQLGNPPS-LQSWTSTSSP--------CDWPEITCTFNS 74
PF V ++ E+ ILL K L +P + LQ W + C W + C N
Sbjct: 19 PF-VSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELVHCHWTGVHCDANG 77
Query: 75 -VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYF 133
V + L + +++ + I +L +DLS+N+ P+ L N T L+ +D+S N F
Sbjct: 78 YVAKLLLSNMNLSGNVSDQIQSFPSLQALDLSNNAFESSLPKSLSNLTSLKVIDVSVNSF 137
Query: 134 VGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS 193
G P + +GL ++ NNFSG +P +G + L+ L F G+ P +L
Sbjct: 138 FGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRGGYFEGSVPSSFKNLK 197
Query: 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGN 253
NL+ LGL+ N NF +P G L L+T+ + +GEIPE L+ L+ L L
Sbjct: 198 NLKFLGLSGN-NFG-GKVPKVIGELSSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVG 255
Query: 254 HLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGK 312
+L G IPS L L LT ++LY N L+G++P + + L +DLS N +TG IP E G+
Sbjct: 256 NLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGE 315
Query: 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTN 372
LKNLQLL L N L+G +P+ I ++P L+ +++ NSL G LP +G +S L+ +VS+N
Sbjct: 316 LKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSN 375
Query: 373 QFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWT 432
+ SG +P LC L ++ F N+ SG +P+ + +C TL V++ N SG +P G
Sbjct: 376 KLSGDIPSGLCYSRNLTKLILFNNSFSGQIPEEIFSCPTLVRVRIQKNHISGSIPAGSGD 435
Query: 433 TFNLSSLMLSDNTISGELPSKTAW--NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNN 490
L L L+ N ++G++P A +L+ ++IS N S S NL F AS+N
Sbjct: 436 LPMLQHLELAKNNLTGKIPDDIALSTSLSFIDISFNHLSSLSSSIFSS-PNLQTFIASHN 494
Query: 491 LFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGS 550
F+G+IP ++ L+ L L N SG +P +I S+ L +LNL N+L GEIPKA+
Sbjct: 495 NFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAG 554
Query: 551 LLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYD-DSFLNNS 608
+ ++ LDLS N +G IP ++G L N+S NKL G IP A D + N+
Sbjct: 555 MHMLAVLDLSNNSLTGNIPADLGASPTLEMLNVSFNKLDGPIPSNMLFAAIDPKDLVGNN 614
Query: 609 NLC--VKNPIINLPKCPSRFRNSDKISSKH--LALILVLAILVLLVTVSLS--WF----- 657
LC V P ++ RN +I H I+ +++V + + L+ W
Sbjct: 615 GLCGGVLPPCSKSLALSAKGRNPGRIHVNHAVFGFIVGTSVIVAMGMMFLAGRWIYTRWD 674
Query: 658 ----VVRDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDIN 713
R+ + K+ R+ W+L +F +L FT +ILS + ESN+IG G G VY+ ++
Sbjct: 675 LYSNFAREYIFCKKPREEWPWRLVAFQRLCFTAGDILSHIKESNIIGMGAIGIVYKAEVM 734
Query: 714 GAGEF-VAVKRIWNNRKLNQKL---------EKEFIAEIEILGTIRHANIVKLWCCISSE 763
VAVK++W + + E + + E+ +LG +RH NIVK+ + +E
Sbjct: 735 RRPLLTVAVKKLWRSPSPQNDIEDHHQEEDEEDDILREVNLLGGLRHRNIVKILGYVHNE 794
Query: 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD 823
++VYEYM N +L LH + + + W +R +A+G QGL Y+H+D
Sbjct: 795 REVMMVYEYMPNGNLGTALHSKDEKFL---------LRDWLSRYNVAVGVVQGLNYLHND 845
Query: 824 CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT 883
C P IIHRD+KS+NILLDS +A+IADFGLAKM+ + E T+S VAGS+GY APEY YT
Sbjct: 846 CYPPIIHRDIKSNNILLDSNLEARIADFGLAKMMLHKNE--TVSMVAGSYGYIAPEYGYT 903
Query: 884 TKVNEKIDIYSFGVVLLELVTGK---EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIA 940
K++EK DIYS GVVLLELVTGK + ++ D + EW R + + + + +D IA
Sbjct: 904 LKIDEKSDIYSLGVVLLELVTGKMPIDPSFEDS-IDVVEWIRRKVKKNESLEEVIDASIA 962
Query: 941 EPC--YLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
C +EEM R+AL+CT+ LP RPS+++V+ +L P
Sbjct: 963 GDCKHVIEEMLLALRIALLCTAKLPKDRPSIRDVITMLAEAKP 1005
|
Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust.
Identities = 352/960 (36%), Positives = 524/960 (54%), Gaps = 44/960 (4%)
Query: 36 ERTILLNLKQQLG---NPPSLQSWTSTSSPCDWPEITC--TFNSVTGISLRHKDITQKIP 90
E LL+LK + P L SW +++ C W +TC + VT + L +++ +
Sbjct: 27 ELHALLSLKSSFTIDEHSPLLTSWNLSTTFCSWTGVTCDVSLRHVTSLDLSGLNLSGTLS 86
Query: 91 PIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR-ISGLQC 149
+ L L + L++N I G P + N +L++L+LS N F G P ++ + L+
Sbjct: 87 SDVAHLPLLQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDELSSGLVNLRV 146
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
+DL NN +GD+P S+ L++L+ L+L N F+G P G LE L A + N
Sbjct: 147 LDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYL--AVSGNELTG 204
Query: 210 MIPIEFGMLKKLKTLWMTEANLI-GEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN 268
IP E G L L+ L++ N +P + NLS L L G IP + L
Sbjct: 205 KIPPEIGNLTTLRELYIGYYNAFENGLPPEIGNLSELVRFDAANCGLTGEIPPEIGKLQK 264
Query: 269 LTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
L LFL N +G I + + L +DLS N TG IP F +LKNL LL LF N L
Sbjct: 265 LDTLFLQVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNLFRNKLY 324
Query: 328 GEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387
G +P IG++P L+ +++ N+ +G +P ++G + L ++S+N+ +G LP N+C+G
Sbjct: 325 GAIPEFIGEMPELEVLQLWENNFTGSIPQKLGENGRLVILDLSSNKLTGTLPPNMCSGNR 384
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
L ++ N L G++P SLG C +L +++ N +G +P L+ LS + L DN ++
Sbjct: 385 LMTLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGLPKLSQVELQDNYLT 444
Query: 448 GELP---SKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS 504
GELP + +L ++ +SNN+ SG + +G+ + N FSG IP E+ L
Sbjct: 445 GELPISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQ 504
Query: 505 HLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564
L+ L N SG++ +I L ++L+RNELSG+IP + + ++ L+LS N
Sbjct: 505 QLSKLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTGMKILNYLNLSRNHL 564
Query: 565 SGEIPPEIGQLK-LNTFNLSSNKLYGNIPD--EFNNLAYDDSFLNNSNLCVKNPIINLPK 621
G IP I ++ L + + S N L G +P +F+ Y SF+ NS+LC P
Sbjct: 565 VGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYT-SFVGNSHLCG-------PY 616
Query: 622 CPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRRK-RNRDPA-TWKLTSF 679
+ + + K L+ L +++ L+ S+ + +V R RN A W+LT+F
Sbjct: 617 LGPCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTAF 676
Query: 680 HQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI 739
+L FT ++L SL E N+IG GG+G VY+ + G+ VAVKR+ + F
Sbjct: 677 QRLDFTCDDVLDSLKEDNIIGKGGAGIVYKGTMP-KGDLVAVKRLATMSH-GSSHDHGFN 734
Query: 740 AEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH 799
AEI+ LG IRH +IV+L S+ + LLVYEYM N SL LHG+K
Sbjct: 735 AEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGH---------- 784
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
LHW TR +IA+ AA+GLCY+HHDC+P I+HRDVKS+NILLDS F+A +ADFGLAK L
Sbjct: 785 -LHWNTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQD 843
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE--ANYGDEHTSL 917
G MSA+AGS+GY APEYAYT KV+EK D+YSFGVVLLEL+TGK+ +GD +
Sbjct: 844 SGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVGEFGDG-VDI 902
Query: 918 AEWAWRHYAEEKP-ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+W K + +D ++ + E+T V+ +AL+C RP+M+EV+QIL
Sbjct: 903 VQWVRSMTDSNKDCVLKVIDLRLSS-VPVHEVTHVFYVALLCVEEQAVERPTMREVVQIL 961
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1024 | ||||||
| 255550970 | 1026 | serine-threonine protein kinase, plant-t | 0.997 | 0.995 | 0.668 | 0.0 | |
| 224143344 | 1014 | predicted protein [Populus trichocarpa] | 0.979 | 0.989 | 0.673 | 0.0 | |
| 224142854 | 1019 | predicted protein [Populus trichocarpa] | 0.974 | 0.979 | 0.682 | 0.0 | |
| 224092252 | 1014 | predicted protein [Populus trichocarpa] | 0.979 | 0.989 | 0.670 | 0.0 | |
| 449461337 | 1090 | PREDICTED: receptor-like protein kinase | 0.975 | 0.916 | 0.630 | 0.0 | |
| 449515460 | 1004 | PREDICTED: receptor-like protein kinase | 0.975 | 0.995 | 0.630 | 0.0 | |
| 359475926 | 1021 | PREDICTED: receptor-like protein kinase | 0.992 | 0.995 | 0.610 | 0.0 | |
| 225429386 | 1499 | PREDICTED: receptor-like protein kinase | 0.958 | 0.655 | 0.624 | 0.0 | |
| 359475921 | 999 | PREDICTED: receptor-like protein kinase | 0.970 | 0.994 | 0.609 | 0.0 | |
| 225429379 | 1004 | PREDICTED: receptor-like protein kinase | 0.978 | 0.998 | 0.612 | 0.0 |
| >gi|255550970|ref|XP_002516533.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223544353|gb|EEF45874.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1396 bits (3614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/1026 (66%), Positives = 830/1026 (80%), Gaps = 5/1026 (0%)
Query: 1 MSKVASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS 60
MSK+ F K + L LL L S PF VI Q NT+E++ILLN+KQQLGNPPSLQSWT+++
Sbjct: 1 MSKLPLPFQKFSLYLSLLFLTSTPFNVISQITNTQEQSILLNIKQQLGNPPSLQSWTTST 60
Query: 61 SPCDWPEITCTFN-SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
SPC WPEI+C+ + SVT + LR K+IT IP ICDLKNLT +DL+ N IPG FP FLYN
Sbjct: 61 SPCTWPEISCSDDGSVTALGLRDKNITVAIPARICDLKNLTVLDLAYNYIPGGFPTFLYN 120
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
C+ L+ LDLSQNYFVG +P DIDR+S L+ IDL NNFSGDIP +IG L ELQTL+L+ N
Sbjct: 121 CSSLERLDLSQNYFVGTVPDDIDRLSNLKSIDLSANNFSGDIPPAIGNLRELQTLFLHQN 180
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
EFNGTFPKEIG+L+NLE L LA+N F P+ IP+EFG L KL LW+ +ANLIG IPE++
Sbjct: 181 EFNGTFPKEIGNLANLEQLRLAFNG-FVPSRIPVEFGNLTKLTFLWIRDANLIGSIPESL 239
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+NLSSLE L L+ N LEG+IP GLFLL NLT L+L+ N LSG++P VEAL L ++DL +
Sbjct: 240 ANLSSLETLDLSINKLEGSIPDGLFLLKNLTYLYLFHNQLSGDMPKKVEALNLVEVDLGI 299
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
NNL GSI E+FGKLKNL+ L L+SN LSGE+P +IG +PALK F+VF N+LSGVLP EIG
Sbjct: 300 NNLIGSISEDFGKLKNLERLHLYSNQLSGELPQTIGLLPALKSFRVFTNNLSGVLPTEIG 359
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
LHS L+ FEVSTN FSG LPENLCAGGVL+GVVAF NNL+G VP+SLG C +L+TVQLY+
Sbjct: 360 LHSKLQYFEVSTNHFSGKLPENLCAGGVLEGVVAFSNNLTGEVPQSLGKCNSLKTVQLYN 419
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
NRFSGE+P+G+WT N++ LMLS+N+ SG+LPS AWNL+RLE+SNN+FSG I G+ SW
Sbjct: 420 NRFSGEIPSGIWTVINMTYLMLSNNSFSGKLPSSLAWNLSRLELSNNKFSGPIPTGISSW 479
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
NL+VF+ASNNL SGEIPVE+TSLSHLNTLLLDGN+L G+LPS+I+SW +LN LNL+RN
Sbjct: 480 VNLVVFEASNNLLSGEIPVEVTSLSHLNTLLLDGNQLLGQLPSKIISWKTLNTLNLSRNA 539
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG+IP AIGSL ++ LDLS N SG+IP E GQL L + NLSSN+ G IPD+F+NLA
Sbjct: 540 LSGQIPAAIGSLPDLLYLDLSQNHLSGQIPSEFGQLNLISLNLSSNQFSGQIPDKFDNLA 599
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
Y++SFLNNSNLC NPI++LP C +R RNSDK+SSK LA+IL+ + ++T+ L+ F V
Sbjct: 600 YENSFLNNSNLCAVNPILDLPNCYTRSRNSDKLSSKFLAMILIFTVTAFIITIVLTLFAV 659
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
RD LR+K R+ A WKLTSF ++ FT++NIL+SLTESNLIGSGGSG+VYR+ +N AGE V
Sbjct: 660 RDYLRKKHKRELAAWKLTSFQRVDFTQANILASLTESNLIGSGGSGKVYRVAVNRAGELV 719
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVKRIW NR+ ++KLEKEF+AE+EILG IRH+NIVKL CCISSE SKLLVYEYMENQSLD
Sbjct: 720 AVKRIWTNRQFDEKLEKEFLAEVEILGAIRHSNIVKLLCCISSEESKLLVYEYMENQSLD 779
Query: 780 RWLHGRKR-SLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838
RWLHG+KR S ++G++SV VL+WP RLQIA+GAAQGLCYMHHDC+P IIHRDVKSSNI
Sbjct: 780 RWLHGKKRNSSLAGTNSVQDIVLNWPRRLQIAVGAAQGLCYMHHDCSPPIIHRDVKSSNI 839
Query: 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVV 898
LLDSEFKA+IADFGLAK+L K+GE TMSAVAGSFGY APEYAYT KVNEKID+YSFGVV
Sbjct: 840 LLDSEFKARIADFGLAKILVKEGEARTMSAVAGSFGYIAPEYAYTIKVNEKIDVYSFGVV 899
Query: 899 LLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALIC 958
LLELVTG+E N GDE++SLAEWAWR AE PI D D+ I +PCYLEEMT V+ L L C
Sbjct: 900 LLELVTGREPNNGDENSSLAEWAWRQNAEGTPIIDCFDEEIRQPCYLEEMTAVFNLGLFC 959
Query: 959 TSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFKRSKKVAAE 1018
TS +P+ RPSMK+VLQ+LRR PT + MG + D APLL +A YL +K SK+V+ E
Sbjct: 960 TSNMPNQRPSMKDVLQVLRRYSPTSY--KENMGSEFDVAPLLASATYLSSYKHSKRVSDE 1017
Query: 1019 EDNGLA 1024
D L
Sbjct: 1018 YDCSLV 1023
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143344|ref|XP_002336031.1| predicted protein [Populus trichocarpa] gi|222838987|gb|EEE77338.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1007 (67%), Positives = 809/1007 (80%), Gaps = 4/1007 (0%)
Query: 1 MSKVASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS 60
MS++ +F + L +LVLLS+PF VI Q NTE +TILL L+QQLGNP S+QSW ++S
Sbjct: 1 MSELTILFLRTSPLLCVLVLLSLPFRVISQDANTE-KTILLKLRQQLGNPSSIQSWNTSS 59
Query: 61 SPCDWPEITCTFN-SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
SPC+W +TC + SV+ + L K+IT+ IP +CDLKNLT +D++ N IPG FP+ LY+
Sbjct: 60 SPCNWTGVTCGGDGSVSELHLGDKNITETIPATVCDLKNLTFLDMNFNYIPGGFPKVLYS 119
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
CTKLQ+LDLSQN+FVGPIP DID++SGL+ I+LGGNNF+G+IP IG L+ELQTL+L+ N
Sbjct: 120 CTKLQHLDLSQNFFVGPIPDDIDKLSGLRYINLGGNNFTGNIPPQIGNLTELQTLHLFQN 179
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
+FNGTFPKEI LSNLEVLGLA+N F P+ IP+EFG LKKL LWM ++NLIGEIPE++
Sbjct: 180 QFNGTFPKEISKLSNLEVLGLAFNE-FVPSSIPVEFGQLKKLWFLWMRQSNLIGEIPESL 238
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+NLSSLE L L N LEG IP GLF L NLT L+L+ N LSGEIP VE L L +IDL+M
Sbjct: 239 TNLSSLEHLDLAINALEGKIPDGLFSLKNLTNLYLFQNNLSGEIPQRVETLNLVEIDLAM 298
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N L GSIP++FGKLK LQ L L NHLSGEVP SIG +PAL FKVF+N+LSG LPP++G
Sbjct: 299 NQLNGSIPKDFGKLKKLQFLSLLDNHLSGEVPPSIGLLPALTTFKVFSNNLSGALPPKMG 358
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
L S L F+V+ NQFSG LPENLCAGGVL G VAFENNLSG VP+SLGNC +L T+QLYS
Sbjct: 359 LSSKLVEFDVAANQFSGQLPENLCAGGVLLGAVAFENNLSGRVPQSLGNCNSLHTIQLYS 418
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
N FSGE+P G+WT N++ LMLSDN+ SG LPSK AWNL+RLE+ NNRFSG I G+ SW
Sbjct: 419 NSFSGEIPAGVWTASNMTYLMLSDNSFSGGLPSKLAWNLSRLELGNNRFSGPIPPGISSW 478
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
NL+ FKASNNL SGEIPVE+TSL HL+ LLLDGN SG+LPSQI+SW SL +LNL+RN
Sbjct: 479 VNLVDFKASNNLLSGEIPVEITSLPHLSNLLLDGNLFSGQLPSQIISWKSLTSLNLSRNA 538
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG+IPK IGSL ++ LDLS N FSGEIP E QLKL + NLSSN L G IPD+F+N A
Sbjct: 539 LSGQIPKEIGSLPDLLYLDLSQNHFSGEIPLEFDQLKLVSLNLSSNHLSGKIPDQFDNHA 598
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
YD+SFLNNSNLC NPI+N P C ++ R+S K+ SK LALIL L + + LVT ++ F+V
Sbjct: 599 YDNSFLNNSNLCAVNPILNFPNCYAKLRDSKKMPSKTLALILALTVTIFLVTTIVTLFMV 658
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
RD R+K RD A WKLTSF +L FTE+N+L+SLTE+NLIGSGGSG+VYR+ IN AG++V
Sbjct: 659 RDYQRKKAKRDLAAWKLTSFQRLDFTEANVLASLTENNLIGSGGSGKVYRVAINRAGDYV 718
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVKRIWNN K++ LEKEF+AE++ILGTIRHANIVKL CCISSE+SKLLVYE+MENQSLD
Sbjct: 719 AVKRIWNNEKMDHNLEKEFLAEVQILGTIRHANIVKLLCCISSESSKLLVYEFMENQSLD 778
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
RWLHGRKRS G+SSVH VL WPTR QIAIGAA+GL YMHHDC+ IIHRDVKSSNIL
Sbjct: 779 RWLHGRKRSSSMGTSSVHNSVLDWPTRFQIAIGAARGLSYMHHDCSTPIIHRDVKSSNIL 838
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
LDSE KA+IADFGLA++LAKQGE HTMS VAGSFGY APEYAYTT+VNEKID+YSFGVVL
Sbjct: 839 LDSELKARIADFGLARILAKQGEVHTMSVVAGSFGYMAPEYAYTTRVNEKIDVYSFGVVL 898
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICT 959
LEL TG+E N GDEHTSLAEWAW+ + + KP+ D LD+ I EPC+L+EMTTV+ L LICT
Sbjct: 899 LELATGREPNSGDEHTSLAEWAWQQFGQGKPVVDCLDQEIKEPCFLQEMTTVFNLGLICT 958
Query: 960 STLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYL 1006
+ PS+RPSMKEVL+ILRR N G KK G ++D PLLGT YL
Sbjct: 959 HSSPSTRPSMKEVLEILRRVSADSN-GEKKTGAELDVVPLLGTVTYL 1004
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142854|ref|XP_002324752.1| predicted protein [Populus trichocarpa] gi|222866186|gb|EEF03317.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1354 bits (3505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1002 (68%), Positives = 815/1002 (81%), Gaps = 4/1002 (0%)
Query: 24 PFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHK 83
PF+VI Q N E +TILLNLKQQLGNP S+QSW S+SSPC+WP++ C +VTG+ L +K
Sbjct: 18 PFKVISQDVNAE-KTILLNLKQQLGNPSSIQSWNSSSSPCEWPDVYCVEGAVTGLDLGNK 76
Query: 84 DITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR 143
+ITQ IP +CDLKNLT ++L+ N IPG FP+ LYNC KL+ LDLSQNYFVGPIP DIDR
Sbjct: 77 NITQTIPASVCDLKNLTYLNLNWNYIPGGFPKLLYNCKKLEELDLSQNYFVGPIPDDIDR 136
Query: 144 ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN 203
+S L+ + L GNNF+G+IP IG L+EL+TL+L+ N+FNGTFPKEIG LSNLE + LAY
Sbjct: 137 LSSLRYLYLQGNNFTGNIPPQIGNLTELRTLFLHQNQFNGTFPKEIGKLSNLEEMALAY- 195
Query: 204 SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGL 263
+F P+ IP+EFG LKKL+ LWM ANLIGEIPE++SNL+SL L L GN LEG IP GL
Sbjct: 196 IDFVPSSIPVEFGQLKKLRLLWMKLANLIGEIPESLSNLTSLVHLDLAGNDLEGKIPGGL 255
Query: 264 FLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFS 323
FLL NLT L+L+ N LSGEIP VE L L +IDL+MN+L GSI ++FGKLK LQLL LF
Sbjct: 256 FLLKNLTNLYLFKNKLSGEIPQIVETLNLVEIDLAMNHLNGSITQDFGKLKKLQLLSLFE 315
Query: 324 NHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLC 383
NHLSGEVPASIG +P L+ FKVF N+LSGVLPP++GLHS LE F+VS NQFSG LPENLC
Sbjct: 316 NHLSGEVPASIGLLPELRAFKVFTNNLSGVLPPKMGLHSTLEEFDVSNNQFSGRLPENLC 375
Query: 384 AGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSD 443
AGGVLQG VAFENNLSG VP+SLGNC +LRTVQLYSN FSGE+P G+WT FN++ LMLS+
Sbjct: 376 AGGVLQGAVAFENNLSGQVPQSLGNCNSLRTVQLYSNNFSGEIPAGIWTAFNMTYLMLSE 435
Query: 444 NTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSL 503
N+ SG LPSK AWNL+RLE++NNRFSG I GV SW NL+VF+ASNNLFSGEIPVE+TSL
Sbjct: 436 NSFSGGLPSKLAWNLSRLELNNNRFSGPIPPGVSSWVNLVVFEASNNLFSGEIPVEITSL 495
Query: 504 SHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQ 563
HL+ LLLDGN+ SG+LPS I SW SL +LNL+RN LSG+IP+ IGSL + LDLS N
Sbjct: 496 PHLSNLLLDGNQFSGQLPSTIPSWKSLTSLNLSRNGLSGQIPREIGSLPDLRYLDLSQNH 555
Query: 564 FSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCP 623
FSGEIPPE GQLKL NLSSN L G IPD+F+NLAYD+SFL N LC NPI+NLP C
Sbjct: 556 FSGEIPPEFGQLKLIFLNLSSNNLSGKIPDQFDNLAYDNSFLENYKLCAVNPILNLPDCH 615
Query: 624 SRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLG 683
++ R+S+K S K L+LILVL + + LVT+ ++ F+VRDC R K+ RD A+WKLTSF +L
Sbjct: 616 TKLRDSEKFSFKILSLILVLTVTIFLVTIIVTLFMVRDCPRGKQKRDLASWKLTSFQRLD 675
Query: 684 FTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE 743
FTE+NIL+SLTE+NLIGSGGSG+VYRI IN AG+FVAVKRIW+N +++ KLEKEF+AE++
Sbjct: 676 FTEANILASLTENNLIGSGGSGKVYRIAINRAGDFVAVKRIWSNEEMDHKLEKEFLAEVQ 735
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
ILGTIRHANIVKL CCISSE SKLLVYEYMEN SLDRWLHG+KRS G+SSV VL W
Sbjct: 736 ILGTIRHANIVKLMCCISSEKSKLLVYEYMENHSLDRWLHGKKRSSSMGASSVRHSVLDW 795
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
PTR QIAIGAA+GLCYMHHDC+ I+HRDVKSSNILLDSEFKA+IADFGLAKMLAKQGE
Sbjct: 796 PTRFQIAIGAARGLCYMHHDCSTPIVHRDVKSSNILLDSEFKARIADFGLAKMLAKQGEA 855
Query: 864 HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG-DEHTSLAEWAW 922
HTMSAVAGSFGY APEYAYTTKVNEKID+YSFGVVLLEL TG+E N G DE TSLAEWAW
Sbjct: 856 HTMSAVAGSFGYIAPEYAYTTKVNEKIDVYSFGVVLLELATGREPNSGDDEDTSLAEWAW 915
Query: 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 982
R + + KP+++ LD+ I EPC+L+EMT V+ L L+CT +LPS+RPSMK+VL+ILRRC P
Sbjct: 916 RQFGQGKPVSNCLDQEIKEPCFLQEMTAVFNLGLVCTHSLPSNRPSMKDVLEILRRCSP- 974
Query: 983 ENYGGKKMGRDVDSAPLLGTAGYLFGFKRSKKVAAEEDNGLA 1024
+N G K+ + D PLLG L +RS +++ + D+ L
Sbjct: 975 DNNGEKRTVSEFDIVPLLGNVTCLSSNRRSNRLSDDNDDSLV 1016
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092252|ref|XP_002309529.1| predicted protein [Populus trichocarpa] gi|222855505|gb|EEE93052.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1331 bits (3444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/1007 (67%), Positives = 802/1007 (79%), Gaps = 4/1007 (0%)
Query: 1 MSKVASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS 60
MS++ +F + L +LVLLS+PF VI Q NTE +TILL LKQQLGNP S+QSW S+S
Sbjct: 1 MSELTILFLRTSPLLCVLVLLSLPFRVISQDANTE-KTILLKLKQQLGNPSSIQSWNSSS 59
Query: 61 SPCDWPEITCTFN-SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
SPC+W +TC + SV+ + L K+IT+ IP +CDLKNLT +D++ N IPG FP+ LY+
Sbjct: 60 SPCNWTGVTCGGDGSVSELHLGDKNITETIPATVCDLKNLTFLDMNFNHIPGGFPKVLYS 119
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
CTKLQ+LDLSQN+F GPIP DID++SGL+ I+LG NNF+G+IP + L+ LQTL+LY N
Sbjct: 120 CTKLQHLDLSQNFFFGPIPDDIDKLSGLRYINLGANNFTGNIPPQMANLTGLQTLHLYQN 179
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
+FNGT PKEI LSNLE LGLA N F P+ IP+EFG LKKL+ LWM ANLIGEIPE++
Sbjct: 180 QFNGTLPKEISKLSNLEELGLAINE-FVPSSIPVEFGQLKKLRYLWMRLANLIGEIPESL 238
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+NLSSLE L L N LEG IP GLF L NLT L+L+ N LSGEIP VE L L +IDL+M
Sbjct: 239 TNLSSLEHLDLAENDLEGKIPDGLFSLKNLTYLYLFQNNLSGEIPQRVETLNLVEIDLAM 298
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N L GSIP++FGKLK LQ L L NHLSGEVP SIG +PAL FKVF+N+LSG LPP++G
Sbjct: 299 NQLNGSIPKDFGKLKKLQFLSLLDNHLSGEVPPSIGLLPALTTFKVFSNNLSGALPPKMG 358
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
L S L F+V+ NQFSG LPENLCAGGVL G VAFENNLSG VP+SLGNC +L T+QLYS
Sbjct: 359 LSSKLVEFDVAANQFSGQLPENLCAGGVLLGAVAFENNLSGRVPQSLGNCNSLHTIQLYS 418
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
N FSGE+P G+WT N++ LMLSDN+ SG LPSK AWNL+RLE+ NNRFSG I G+ SW
Sbjct: 419 NSFSGEIPAGVWTASNMTYLMLSDNSFSGGLPSKLAWNLSRLELGNNRFSGPIPPGISSW 478
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
NL+ FKASNNL SGEIPVE+TSL HL+ LLLDGN SG+LPSQI+SW SL +LNL+RN
Sbjct: 479 VNLVDFKASNNLLSGEIPVEITSLPHLSNLLLDGNLFSGQLPSQIISWKSLTSLNLSRNA 538
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG+IPK IGSL ++ LDLS N FSGEIP E QLKL + NLSSN L G IPD+F+N A
Sbjct: 539 LSGQIPKEIGSLPDLLYLDLSQNHFSGEIPLEFDQLKLVSLNLSSNHLSGKIPDQFDNHA 598
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
YD+SFLNNSNLC NPI+N P C ++ R+S K+ SK LALIL L + + LVT ++ F+V
Sbjct: 599 YDNSFLNNSNLCAVNPILNFPNCYAKLRDSKKMPSKTLALILALTVTIFLVTTIVTLFMV 658
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
RD R+K RD A WKLTSF +L FTE+N+L+SLTE+NLIGSGGSG+VYR+ IN AG++V
Sbjct: 659 RDYQRKKAKRDLAAWKLTSFQRLDFTEANVLASLTENNLIGSGGSGKVYRVAINRAGDYV 718
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVKRIWNN K++ LEKEF+AE++ILGTIRHANIVKL CCISSE+SKLLVYE+MENQSLD
Sbjct: 719 AVKRIWNNEKMDHNLEKEFLAEVQILGTIRHANIVKLLCCISSESSKLLVYEFMENQSLD 778
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
RWLHGRKRS G+SSVH VL WPTR QIAIGAA+GL YMHHDC+ IIHRDVKSSNIL
Sbjct: 779 RWLHGRKRSSSMGTSSVHNSVLDWPTRFQIAIGAARGLSYMHHDCSTPIIHRDVKSSNIL 838
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
LDSE KA+IADFGLA++LAKQGE HTMS VAGSFGY APEYAYTT+VNEKID+YSFGVVL
Sbjct: 839 LDSELKARIADFGLARILAKQGEVHTMSVVAGSFGYMAPEYAYTTRVNEKIDVYSFGVVL 898
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICT 959
LEL TG+E N GDEHTSLAEWAW+ + + KP+ D LD+ I EPC+L+EMTTV+ L LICT
Sbjct: 899 LELATGREPNSGDEHTSLAEWAWQQFGQGKPVVDCLDQEIKEPCFLQEMTTVFNLGLICT 958
Query: 960 STLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYL 1006
+ PS+RPSMKEVL+ILRR N G KK G ++D PLLGT YL
Sbjct: 959 HSSPSTRPSMKEVLEILRRASADSN-GEKKTGAELDVVPLLGTVTYL 1004
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461337|ref|XP_004148398.1| PREDICTED: receptor-like protein kinase HSL1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1005 (63%), Positives = 781/1005 (77%), Gaps = 6/1005 (0%)
Query: 1 MSKVASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS 60
MS+++ F + + L + I F Q+ N ++ ILL+LK+Q GNPPSL W ++S
Sbjct: 87 MSRISLPFLTTLLPVYLFYFIYIQFHASSQTVNVDQ-AILLDLKEQWGNPPSLWLWNASS 145
Query: 61 SPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNC 120
PCDWPEI C ++V GISLR+K IT K+P +IC+L+NLT +DLS N IPGEFPE LYNC
Sbjct: 146 LPCDWPEIICRDSTVIGISLRNKTITGKVPTVICNLQNLTVLDLSWNYIPGEFPEVLYNC 205
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNE 180
+KL+ LDLS NYFVGPIP D+DR+ LQ +DL NNFSGD P ++G+LS+L+TL +Y +
Sbjct: 206 SKLKYLDLSGNYFVGPIPQDVDRLQTLQYMDLSANNFSGDFPAALGQLSDLRTLKIYRTQ 265
Query: 181 FNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS 240
NGT P EIG+LSNLE L +AYN+ P+ IP +F LKKLK +WMT++NLIG+IPE++
Sbjct: 266 CNGTLPAEIGNLSNLETLSMAYNTLLVPSPIPEDFRKLKKLKYMWMTKSNLIGQIPESLL 325
Query: 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMN 300
L SLE L L+ N+L G+IP GLF L NLT LFLY N LSGEIP S+ A L ++DLS N
Sbjct: 326 ELLSLEHLDLSSNNLIGSIPVGLFSLQNLTNLFLYQNRLSGEIPKSIRASNLLNVDLSTN 385
Query: 301 NLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGL 360
NL+G+IPE+FGKLK LQ+L LF+N LSGE+P S+G +P LK F+VFNNSL+G LP E+GL
Sbjct: 386 NLSGTIPEDFGKLKKLQVLNLFANQLSGEIPGSLGLLPELKGFRVFNNSLTGGLPQELGL 445
Query: 361 HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSN 420
HS LE EVS N+ SG LPE+LC VLQGVVAF NNLSG +PK LGNCRTLRTVQL +N
Sbjct: 446 HSNLEALEVSMNKLSGSLPEHLCKNSVLQGVVAFSNNLSGKLPKGLGNCRTLRTVQLSNN 505
Query: 421 RFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWK 480
FSGE+P GLWTTFNLSS+ML N+ SGELP +WNL+RL I+NN+FSGQI + V +W+
Sbjct: 506 NFSGEIPPGLWTTFNLSSIMLDGNSFSGELPDSLSWNLSRLAINNNKFSGQIPQNVSAWR 565
Query: 481 NLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNEL 540
NLIVF+AS+NL SG+ P LTSL HL TL+L GN+LSG+LP+ I SW SLN LNL+RNE+
Sbjct: 566 NLIVFEASDNLLSGKFPDGLTSLPHLTTLVLSGNQLSGQLPTTIGSWESLNTLNLSRNEI 625
Query: 541 SGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAY 600
SG IP A GSL ++ LDLSGN F+GEIPPEIG L+L + NLSSN+L G IPDE+ N+AY
Sbjct: 626 SGHIPAAFGSLPNLLYLDLSGNNFTGEIPPEIGHLRLASLNLSSNQLSGKIPDEYENIAY 685
Query: 601 DDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV- 659
SFLNN LC +++LP C SR +S S K+L+LIL A+ V L+ ++L W ++
Sbjct: 686 GRSFLNNPKLCTAIGVLDLPSCYSRQIDSKYQSFKYLSLIL--ALTVTLLVIALLWIIIL 743
Query: 660 -RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEF 718
+ ++ P TWKLTSF +L FTE+NILS+LTE+NLIGSGGSG+VY IDIN AG +
Sbjct: 744 YKSYCKKDERCHPDTWKLTSFQRLEFTETNILSNLTETNLIGSGGSGKVYCIDINHAGYY 803
Query: 719 VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778
VAVKRIW+N +L++KLEKEF AE++ILG+IRH+NIVKL CC+ +ENSKLLVYEYMENQSL
Sbjct: 804 VAVKRIWSNNELDKKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSKLLVYEYMENQSL 863
Query: 779 DRWLHGRKRSLVSGSSS-VHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 837
DRWLH +K+ L S + + + Q VL WP RLQIAIGAAQGL YMHHDC+P IIHRDVKSSN
Sbjct: 864 DRWLHKKKKRLTSAAMNFLEQSVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSN 923
Query: 838 ILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897
ILLD EF+AKIADFGLAKMLA QGEPHT+SA+AGSFGY APEYAYTTKVNEKID+YSFGV
Sbjct: 924 ILLDREFQAKIADFGLAKMLASQGEPHTISAIAGSFGYIAPEYAYTTKVNEKIDVYSFGV 983
Query: 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI 957
VLLEL TG+E N GDEHTSLAEWAW+ Y+E K ITD+LD+ I PC EEM+T+++L LI
Sbjct: 984 VLLELTTGREPNSGDEHTSLAEWAWQQYSEGKTITDSLDEEIKNPCNFEEMSTMFKLGLI 1043
Query: 958 CTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGT 1002
CTS LP RPSMKEVL+ILR+C P E +K + D+ PLLGT
Sbjct: 1044 CTSMLPEIRPSMKEVLRILRQCSPPEACDRRKHAIEFDAIPLLGT 1088
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515460|ref|XP_004164767.1| PREDICTED: receptor-like protein kinase HSL1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1005 (63%), Positives = 781/1005 (77%), Gaps = 6/1005 (0%)
Query: 1 MSKVASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS 60
MS+++ F + + L + I F Q+ N ++ ILL+LK+Q GNPPSL W ++S
Sbjct: 1 MSRISLPFLTTLLPVYLFYFIYIQFHASSQTVNVDQ-AILLDLKEQWGNPPSLWLWNASS 59
Query: 61 SPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNC 120
PCDWPEI C ++V GISLR+K IT K+P +IC+L+NLT +DLS N IPGEFPE LYNC
Sbjct: 60 LPCDWPEIICRDSTVIGISLRNKTITGKVPTVICNLQNLTVLDLSWNYIPGEFPEVLYNC 119
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNE 180
+KL+ LDLS NYFVGPIP D+DR+ LQ +DL NNFSGD P ++G+LS+L+TL +Y +
Sbjct: 120 SKLKYLDLSGNYFVGPIPQDVDRLQTLQYMDLSANNFSGDFPAALGQLSDLRTLKIYRTQ 179
Query: 181 FNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS 240
NGT P EIG+LSNLE L +AYN+ P+ IP +F LKKLK +WMT++NLIG+IPE++
Sbjct: 180 CNGTLPAEIGNLSNLETLSMAYNTLLVPSPIPEDFRKLKKLKYMWMTKSNLIGQIPESLL 239
Query: 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMN 300
L SLE L L+ N+L G+IP GLF L NLT LFLY N LSGEIP S+ A L ++DLS N
Sbjct: 240 ELLSLEHLDLSSNNLIGSIPVGLFSLQNLTNLFLYQNRLSGEIPKSIRASNLLNVDLSTN 299
Query: 301 NLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGL 360
NL+G+IPE+FGKLK LQ+L LF+N LSGE+P S+G +P LK F+VFNNSL+G LP E+GL
Sbjct: 300 NLSGTIPEDFGKLKKLQVLNLFANQLSGEIPGSLGLLPELKGFRVFNNSLTGGLPQELGL 359
Query: 361 HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSN 420
HS LE EVS N+ SG LPE+LC VLQGVVAF NNLSG +PK LGNCRTLRTVQL +N
Sbjct: 360 HSNLEALEVSMNKLSGSLPEHLCKNSVLQGVVAFSNNLSGKLPKGLGNCRTLRTVQLSNN 419
Query: 421 RFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWK 480
FSGE+P GLWTTFNLSS+ML N+ SGELP +WNL+RL I+NN+FSGQI + V +W+
Sbjct: 420 NFSGEIPPGLWTTFNLSSIMLDGNSFSGELPDSLSWNLSRLAINNNKFSGQIPQNVSAWR 479
Query: 481 NLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNEL 540
NLIVF+AS+NL SG+ P LTSL HL TL+L GN+LSG+LP+ I SW SLN LNL+RNE+
Sbjct: 480 NLIVFEASDNLLSGKFPDGLTSLPHLTTLVLSGNQLSGQLPTTIGSWESLNTLNLSRNEI 539
Query: 541 SGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAY 600
SG IP A GSL ++ LDLSGN F+GEIPPEIG L+L + NLSSN+L G IPDE+ N+AY
Sbjct: 540 SGHIPAAFGSLPNLLYLDLSGNNFTGEIPPEIGHLRLASLNLSSNQLSGKIPDEYENIAY 599
Query: 601 DDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV- 659
SFLNN LC +++LP C SR +S S K+L+LIL A+ V L+ ++L W ++
Sbjct: 600 GRSFLNNPKLCTAIGVLDLPSCYSRQIDSKYQSFKYLSLIL--ALTVTLLVIALLWIIIL 657
Query: 660 -RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEF 718
+ ++ P TWKLTSF +L FTE+NILS+LTE+NLIGSGGSG+VY IDIN AG +
Sbjct: 658 YKSYCKKDERCHPDTWKLTSFQRLEFTETNILSNLTETNLIGSGGSGKVYCIDINHAGYY 717
Query: 719 VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778
VAVKRIW+N +L++KLEKEF AE++ILG+IRH+NIVKL CC+ +ENSKLLVYEYMENQSL
Sbjct: 718 VAVKRIWSNNELDKKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSKLLVYEYMENQSL 777
Query: 779 DRWLHGRKRSLVSGSSS-VHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 837
DRWLH +K+ L S + + + Q VL WP RLQIAIGAAQGL YMHHDC+P IIHRDVKSSN
Sbjct: 778 DRWLHKKKKRLTSAAMNFLEQSVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSN 837
Query: 838 ILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897
ILLD EF+AKIADFGLAKMLA QGEPHT+SA+AGSFGY APEYAYTTKVNEKID+YSFGV
Sbjct: 838 ILLDREFQAKIADFGLAKMLASQGEPHTISAIAGSFGYIAPEYAYTTKVNEKIDVYSFGV 897
Query: 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI 957
VLLEL TG+E N GDEHTSLAEWAW+ Y+E K ITD+LD+ I PC EEM+T+++L LI
Sbjct: 898 VLLELTTGREPNSGDEHTSLAEWAWQQYSEGKTITDSLDEEIKNPCNFEEMSTMFKLGLI 957
Query: 958 CTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGT 1002
CTS LP RPSMKEVL+ILR+C P E +K + D+ PLLGT
Sbjct: 958 CTSMLPEIRPSMKEVLRILRQCSPPEACDRRKHAIEFDAIPLLGT 1002
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475926|ref|XP_002278306.2| PREDICTED: receptor-like protein kinase HSL1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1241 bits (3211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1022 (61%), Positives = 783/1022 (76%), Gaps = 6/1022 (0%)
Query: 1 MSKVASVFPKIPV-TLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTST 59
M K+ +F P TL L++LSI F+VI Q+ + +ER+ILL++KQQLGNPPSLQSW S+
Sbjct: 1 MPKLPLLFATTPFPTLFFLLILSI-FQVISQNLD-DERSILLDVKQQLGNPPSLQSWNSS 58
Query: 60 SSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
S PCDWPEITCT N+VT ISL +K I +KIP ICDLKNL +DLS+N I GEFP+ L N
Sbjct: 59 SLPCDWPEITCTDNTVTAISLHNKTIREKIPATICDLKNLIVLDLSNNYIVGEFPDIL-N 117
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
C+KL+ L L QN FVGPIP+DIDR+S L+ +DL NNFSGDIP +IGRL EL L+L N
Sbjct: 118 CSKLEYLLLLQNSFVGPIPADIDRLSHLRYLDLTANNFSGDIPAAIGRLRELFYLFLVQN 177
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
EFNGT+P EIG+L+NLE L +AYN F+P+ +P EFG LKKLK LWMT+ANLIGEIP++
Sbjct: 178 EFNGTWPTEIGNLANLEHLAMAYNDKFRPSALPKEFGALKKLKYLWMTQANLIGEIPKSF 237
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
++LSSLE L L+ N LEG IP + +L NLT L+L++N LSG IPSS+EAL L +IDLS
Sbjct: 238 NHLSSLEHLDLSLNKLEGTIPGVMLMLKNLTNLYLFNNRLSGRIPSSIEALNLKEIDLSK 297
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N+LTG IPE FGKL+NL L LF N LSGE+P +I IP L+ FKVF+N LSGVLPP G
Sbjct: 298 NHLTGPIPEGFGKLQNLTGLNLFWNQLSGEIPVNISLIPTLETFKVFSNQLSGVLPPAFG 357
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
LHS L+ FEVS N+ SG LP++LCA GVL GVVA NNLSG VPKSLGNCR+L T+QL +
Sbjct: 358 LHSELKRFEVSENKLSGELPQHLCARGVLLGVVASNNNLSGEVPKSLGNCRSLLTIQLSN 417
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
NRFSGE+P+G+WT+ ++ +ML+ N+ SG LPSK A NL+R+EISNN+FSG I + SW
Sbjct: 418 NRFSGEIPSGIWTSPDMIWVMLAGNSFSGTLPSKLARNLSRVEISNNKFSGPIPAEISSW 477
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
N+ V ASNN+ SG+IP+ELTSL +++ LLLDGN+ SG+LPS+I+SW SLNNLNL+RN+
Sbjct: 478 MNIAVLNASNNMLSGKIPMELTSLRNISVLLLDGNQFSGELPSEIISWKSLNNLNLSRNK 537
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG IPKA+GSL + LDLS NQFSG+IPPE+G L LN +LS N+L G +P EF
Sbjct: 538 LSGPIPKALGSLPNLNYLDLSENQFSGQIPPELGHLTLNILDLSFNQLSGMVPIEFQYGG 597
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
Y+ SFLN+ LCV + LP+C ++ +SDK+S+K+L +IL+ + L V + ++
Sbjct: 598 YEHSFLNDPKLCVNVGTLKLPRCDAKVVDSDKLSTKYLVMILIFVVSGFLAIVLFTLLMI 657
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
RD R+ +RD WK+T F L F E IL++LTE+NLIG GGSG+VYRI N +GE +
Sbjct: 658 RDDNRKNHSRDHTPWKVTQFQTLDFNEQYILTNLTENNLIGRGGSGEVYRIANNRSGELL 717
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVK+I NNR+L+ K +K+FIAE+EILGTIRH+NIVKL CCIS+E+S LLVYEYME QSLD
Sbjct: 718 AVKKICNNRRLDHKFQKQFIAEVEILGTIRHSNIVKLLCCISNESSSLLVYEYMEKQSLD 777
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
RWLHG+K+ S +SSVH VL WPTRLQIAIGAA+GLC+MH +C+ IIHRDVKSSNIL
Sbjct: 778 RWLHGKKQRTTSMTSSVHNFVLDWPTRLQIAIGAAKGLCHMHENCSAPIIHRDVKSSNIL 837
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
LD+EF AKIADFGLAKML KQGE TMS VAGS+GY APEYAYTTKVNEKID+YSFGVVL
Sbjct: 838 LDAEFNAKIADFGLAKMLVKQGEADTMSGVAGSYGYIAPEYAYTTKVNEKIDVYSFGVVL 897
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICT 959
LELVTG+E N DEH L EWAW + EEK I + +D+ I E C ++TT++ L L+CT
Sbjct: 898 LELVTGREPNSRDEHMCLVEWAWDQFKEEKTIEEVMDEEIKEQCERAQVTTLFSLGLMCT 957
Query: 960 STLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFKRSKKVAAEE 1019
+ PS+RP+MKEVL+ILR+C P E +G KK +D ++APLL Y +K S+K + E
Sbjct: 958 TRSPSTRPTMKEVLEILRQCSPQEGHGRKK--KDHEAAPLLQNGTYPATYKHSEKESDNE 1015
Query: 1020 DN 1021
D+
Sbjct: 1016 DD 1017
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429386|ref|XP_002278343.1| PREDICTED: receptor-like protein kinase HSL1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1209 bits (3128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/986 (62%), Positives = 761/986 (77%), Gaps = 4/986 (0%)
Query: 35 EERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIIC 94
+ER+ILL++KQQLGNPPSLQSW S+SSPCDWPEITCT N++ ISL +K I +KIP IC
Sbjct: 35 DERSILLDVKQQLGNPPSLQSWNSSSSPCDWPEITCTNNTIIAISLHNKTIREKIPATIC 94
Query: 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
DLKNL +DLS+N IPGEFP+ L NC+KL+ L L QN FVGPIP+DIDR+S L+ +DL
Sbjct: 95 DLKNLIILDLSNNYIPGEFPDIL-NCSKLEYLLLLQNSFVGPIPADIDRLSRLRYLDLTA 153
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE 214
NNFSGDIP +IGRL EL L+L NEFNGT+PKEIG+L+NLE L +AYN+ F P+ +P E
Sbjct: 154 NNFSGDIPTAIGRLRELFYLFLVQNEFNGTWPKEIGNLANLEHLVMAYNNKFLPSALPKE 213
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFL 274
FG LKKLK LWM +ANLIGEIPE+ +NL SLE L L+ N LEG IP G+ +L NLT L+L
Sbjct: 214 FGALKKLKYLWMKQANLIGEIPESFNNLWSLEHLDLSLNKLEGTIPGGMLMLKNLTNLYL 273
Query: 275 YDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI 334
++N LSG IP ++EAL L +IDLS N LTG IP FGKL+NL L LF N LSGE+PA+I
Sbjct: 274 FNNRLSGRIPMTIEALNLKEIDLSKNYLTGPIPTGFGKLQNLTSLNLFWNQLSGEIPANI 333
Query: 335 GKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAF 394
IP L+ FKVF+N LSGVLPP GLHS L+ FEVS N+ SG LP++LCA G L GVV
Sbjct: 334 SLIPTLETFKVFSNQLSGVLPPAFGLHSELKRFEVSENKLSGKLPQHLCARGALLGVVVS 393
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
NNLSG VPKSLGNC +L T+QL +N FS E+P+G+WT+ ++ S+MLS N+ SG LPS+
Sbjct: 394 NNNLSGEVPKSLGNCTSLLTIQLSNNCFSSEIPSGIWTSPDMVSVMLSGNSFSGALPSRL 453
Query: 455 AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGN 514
A NL+R++ISNN+FSG I + SW N+ V A+NN+ SG+IPVELTSL +++ LLL+GN
Sbjct: 454 ARNLSRVDISNNKFSGPIPAEISSWMNIGVLIANNNMLSGKIPVELTSLWNISILLLNGN 513
Query: 515 KLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ 574
+ SG+LPSQI+SW SL NLNL+RN+LSG IPKA+GSL + LDLS NQFSG+IP E+G
Sbjct: 514 QFSGELPSQIISWKSLTNLNLSRNKLSGLIPKALGSLTSLTYLDLSENQFSGQIPSELGH 573
Query: 575 LKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISS 634
LKLN +LSSN+L G +P EF Y+ SFLNN LCV + LP+C + +SDK+S+
Sbjct: 574 LKLNILDLSSNQLSGMVPIEFQYGGYEHSFLNNPKLCVNVGTLKLPRCDVKVVDSDKLST 633
Query: 635 KHLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLT 694
K+L +IL+ A+ LV V + F+VRD R+ +RD TWKLT F L F E NILS LT
Sbjct: 634 KYLVMILIFALSGFLVVVFFTLFMVRDYHRKNHSRDHTTWKLTRFQNLDFDEHNILSGLT 693
Query: 695 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
E+NLIG GGSG+VYRI N +GE +AVKRI NNR+L+ KL+K+FIAE+EILGTIRH+NIV
Sbjct: 694 ENNLIGRGGSGKVYRIANNRSGELLAVKRICNNRRLDHKLQKQFIAEVEILGTIRHSNIV 753
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
KL CCIS+E+S LLVYEYME+QSLDRWLHG+K+ S +SSVH VL WPTRLQIAIGAA
Sbjct: 754 KLLCCISNESSSLLVYEYMESQSLDRWLHGKKQRTSSMTSSVHNFVLDWPTRLQIAIGAA 813
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL +MH C+ IIHRDVKSSNILLD+EF AKIADFGLAKML KQGE TMS +AGS+G
Sbjct: 814 KGLRHMHEYCSAPIIHRDVKSSNILLDAEFNAKIADFGLAKMLVKQGEADTMSGIAGSYG 873
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
Y APEYAYTTKVNEKID+YSFGVVLLELVTG+E N G+EH L EWAW + EEK I +
Sbjct: 874 YIAPEYAYTTKVNEKIDVYSFGVVLLELVTGREPNSGNEHMCLVEWAWDQFREEKTIEEV 933
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDV 994
+D+ I E C ++TT++ L L+CT+TLPS+RP+MKEVL+ILR+C P E +G KK +D
Sbjct: 934 MDEEIKEECDTAQVTTLFTLGLMCTTTLPSTRPTMKEVLEILRQCNPQEGHGRKK--KDH 991
Query: 995 DSAPLLGTA-GYLFGFKRSKKVAAEE 1019
+ APLL + GY +R K A+E
Sbjct: 992 EVAPLLASQRGYRKLRRRPAKSKAKE 1017
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475921|ref|XP_003631769.1| PREDICTED: receptor-like protein kinase HSL1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1185 bits (3066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1001 (60%), Positives = 764/1001 (76%), Gaps = 7/1001 (0%)
Query: 1 MSKVASVFPKIPV-TLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTST 59
M K +F KIP L LL++ S+ F+VI Q+ + E R+ILL++KQQLGNPPSLQSW S+
Sbjct: 1 MRKPPFLFTKIPFPALFLLLVFSLTFQVISQNLDAE-RSILLDVKQQLGNPPSLQSWNSS 59
Query: 60 SSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
SSPCDWPEITC N VT ISL +K IT+KIP ICDLKNL +D+S N IPGEFP+ L N
Sbjct: 60 SSPCDWPEITCIDNIVTEISLSYKTITKKIPARICDLKNLIVLDVSYNYIPGEFPDIL-N 118
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
C+KL+ L L QN FVGPIP+DIDR+S L+ +DL NNFSGDIP +IGRL EL L+L N
Sbjct: 119 CSKLEYLLLLQNSFVGPIPADIDRLSRLRYLDLTANNFSGDIPAAIGRLQELFYLFLVQN 178
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
EFNGT+P EIG+L+NLE L +AYN F+P+ +P EFG LKKLK LWMTEANLIGEIP++
Sbjct: 179 EFNGTWPTEIGNLANLEQLAMAYNDKFRPSALPKEFGALKKLKFLWMTEANLIGEIPKSF 238
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+NLSSLE L L+ N L G IP G+ L NLT L+L+ N LSG +PSS+EA L +IDLS
Sbjct: 239 NNLSSLERLDLSLNELNGTIPVGMLTLKNLTYLYLFCNRLSGRVPSSIEAFNLKEIDLSD 298
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N+LTG IP F KL+NL L LF N LSGE+P +I IP L+ FKVF+N LSGVLPP G
Sbjct: 299 NHLTGPIPAGFVKLQNLTCLNLFWNQLSGEIPTNISLIPTLETFKVFSNQLSGVLPPAFG 358
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
LHS L+ FE+ N+ SG LP++LCA G L GV+A NNLSG VPKSLGNC++L T+Q+ +
Sbjct: 359 LHSELKFFEIFENKLSGELPQHLCARGTLLGVIASNNNLSGEVPKSLGNCKSLLTIQVSN 418
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
NRFSGE+P+G+WT+ ++ S+ML+ N+ SG LPS+ NL+R++ISNN+FSGQI + SW
Sbjct: 419 NRFSGEIPSGIWTSPDMVSVMLAGNSFSGALPSRLTRNLSRVDISNNKFSGQIPAEISSW 478
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
N+ V A+NN+ SG+IP+ELTSL +++ LLLDGN+ SG+LPSQI+SW SL NLNL+RN+
Sbjct: 479 MNIGVLNANNNMLSGKIPMELTSLWNISVLLLDGNQFSGELPSQIISWKSLTNLNLSRNK 538
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG IPKA+GSL + LDLS NQF G+IP E+G LKLN NLSSN+L G +P EF N A
Sbjct: 539 LSGLIPKALGSLPSLTYLDLSENQFLGQIPSELGHLKLNILNLSSNQLSGLVPFEFQNEA 598
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
Y+ SFLNN LCV + LP+C ++ +SDK+S+K+L +IL+LA+ L V + +V
Sbjct: 599 YNYSFLNNPKLCVNVGTLKLPRCDAKVVDSDKLSTKYLVMILILALSGFLAVVFFTLVMV 658
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
RD R+ +RD TWKLT F L F E NILS LTE+NLIG GGSG+VYRI + +G+
Sbjct: 659 RDYHRKNHSRDHTTWKLTRFQNLDFDEQNILSGLTENNLIGRGGSGKVYRIANDRSGKIF 718
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVK I NN +L+ KL+K FIA+ EILGT+ H+NIVKL CCIS+E + LLVYEYMENQSLD
Sbjct: 719 AVKMICNNGRLDHKLQKPFIAKDEILGTLHHSNIVKLLCCISNETTSLLVYEYMENQSLD 778
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
RWLHG+K+ +S +S VH +L WPTRLQIAIG A+GL +MH C+ IIHRDVKSSNIL
Sbjct: 779 RWLHGKKQRTLSMTSLVHNFILDWPTRLQIAIGVAKGLRHMHEYCSAPIIHRDVKSSNIL 838
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
LD+EF AKIADFGLAKML KQGEP TMS VAGS+GY APEYAYTTKVNEKID+YSFGVVL
Sbjct: 839 LDAEFNAKIADFGLAKMLVKQGEPDTMSGVAGSYGYIAPEYAYTTKVNEKIDVYSFGVVL 898
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICT 959
LELVTG+E N +EH L EWAW + E K I + +D+ I E C ++TT++ L L+CT
Sbjct: 899 LELVTGREPN--NEHMCLVEWAWDQFREGKTIEEVVDEEIKEQCDRAQVTTLFNLGLMCT 956
Query: 960 STLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLL 1000
+TLPS+RP+MKEVL+IL++C P E++G KK +D ++ PLL
Sbjct: 957 TTLPSTRPTMKEVLEILQQCNPQEDHGRKK--KDHEATPLL 995
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429379|ref|XP_002278223.1| PREDICTED: receptor-like protein kinase HSL1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1183 bits (3060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1011 (61%), Positives = 766/1011 (75%), Gaps = 9/1011 (0%)
Query: 1 MSKVASVFPKIPV-TLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTST 59
M K +F KIP L LL++ S+ F+VI Q+ + E R+ILL++KQQLGNPPSLQSW S+
Sbjct: 1 MRKPPFLFTKIPFPALFLLLVFSLTFQVISQNLDAE-RSILLDVKQQLGNPPSLQSWNSS 59
Query: 60 SSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN 119
SSPCDWPEITC N VT ISL +K IT+KIP ICDLKNL +D+S N IPGEFP+ L N
Sbjct: 60 SSPCDWPEITCIDNIVTEISLSYKTITKKIPARICDLKNLIVLDVSYNYIPGEFPDIL-N 118
Query: 120 CTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
C+KL+ L L QN FVGPIP+DIDR+S L+ +DL NNFSGDIP +IGRL EL L+L N
Sbjct: 119 CSKLEYLLLLQNSFVGPIPADIDRLSRLRYLDLTANNFSGDIPVAIGRLRELFYLFLVQN 178
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
EFNGT+P EIG+LSNLE L +AYN F+P+ +P EFG LKKLK LWMT+ANL+GEIPE+
Sbjct: 179 EFNGTWPTEIGNLSNLEQLAMAYNDKFRPSALPKEFGALKKLKYLWMTKANLMGEIPESF 238
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+NLSSLE+L L+ N LEG IP G+ L NL L+ N LSG IPSS+EAL L +IDLS
Sbjct: 239 NNLSSLELLDLSNNKLEGTIPGGMLTLKNLNYFLLFINRLSGHIPSSIEALNLKEIDLSD 298
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N+LTGSIP FGKL+NL L LF N LSGE+PA+I IP L+ FKVF+N LSGVLPP G
Sbjct: 299 NHLTGSIPAGFGKLQNLTGLNLFWNQLSGEIPANISLIPTLETFKVFSNQLSGVLPPAFG 358
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
LHS L+ FEVS N+ SG LP++LCA G L GVVA NNLSG VP SLGNC +L T+QL +
Sbjct: 359 LHSELKLFEVSENKLSGELPQHLCARGTLLGVVASNNNLSGEVPTSLGNCTSLLTIQLSN 418
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW 479
NRFSG +P+G+WT+ ++ S+ML N+ SG LPSK A NL+R+EI+NN+F G I + SW
Sbjct: 419 NRFSGGIPSGIWTSPDMVSVMLDGNSFSGTLPSKLARNLSRVEIANNKFYGPIPAEISSW 478
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
N+ V ASNN+ SG+IPVELTSL ++ LLLDGN+ SG+LPSQI+SW SLN LNL+RN+
Sbjct: 479 MNISVLNASNNMLSGKIPVELTSLWNITVLLLDGNQFSGELPSQIISWKSLNKLNLSRNK 538
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 599
LSG IPKA+GSL + LDLS NQFSG+IPPE+G L L +LSSN+L G +P EF + A
Sbjct: 539 LSGLIPKALGSLTSLSYLDLSENQFSGQIPPELGHLNLIILHLSSNQLSGMVPIEFQHEA 598
Query: 600 YDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
Y+DSFLNN LCV P +NLP+C ++ NSDK+S+K+L L + V+ VT+S+ V
Sbjct: 599 YEDSFLNNPKLCVNVPTLNLPRCDAKPVNSDKLSTKYLVFALSGFLAVVFVTLSM----V 654
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
R+ N++ WK T +H+L E NILSSLTE+NLIG GGSG+VYR+ N +GE +
Sbjct: 655 HVYHRKNHNQEHTAWKFTPYHKLDLDEYNILSSLTENNLIGCGGSGKVYRVANNRSGELL 714
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
AVK I NNR+L+QKL+K+F E++IL TIRHANIVKL CCIS+E S LLVYEYM+ QSLD
Sbjct: 715 AVKMICNNRRLDQKLQKQFETEVKILSTIRHANIVKLLCCISNETSSLLVYEYMQKQSLD 774
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
RWLHG+K+ S +SSVH VL WPTRLQIAIGAA+GLC+MH +C+ IIHRDVKSSNIL
Sbjct: 775 RWLHGKKQRTSSMTSSVHNFVLDWPTRLQIAIGAAKGLCHMHENCSAPIIHRDVKSSNIL 834
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
LD+EF AKIADFGLAKML KQGEP TMS +AGS+GY APEYAYTTKVN+KID+YSFGVVL
Sbjct: 835 LDAEFNAKIADFGLAKMLVKQGEPDTMSGIAGSYGYIAPEYAYTTKVNKKIDVYSFGVVL 894
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICT 959
LELVTG+E N GDEH LAEWAW + EEK I + +D+ I E C ++ T+++L + CT
Sbjct: 895 LELVTGREPNNGDEHVCLAEWAWDQFREEKTIEEVMDEEIKEECDRAQVATLFKLGIRCT 954
Query: 960 STLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFK 1010
+ LPS+RP+MK VL+IL++C P E +G K +D + AP L Y +K
Sbjct: 955 NKLPSNRPTMKGVLKILQQCSPQEGHGRNK--KDHEVAPPLRNDTYPTTYK 1003
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1024 | ||||||
| TAIR|locus:2180617 | 1005 | AT5G25930 [Arabidopsis thalian | 0.974 | 0.993 | 0.566 | 1e-304 | |
| TAIR|locus:2032553 | 996 | HSL1 "HAESA-like 1" [Arabidops | 0.892 | 0.917 | 0.426 | 1.8e-188 | |
| TAIR|locus:2005540 | 999 | HAE "HAESA" [Arabidopsis thali | 0.915 | 0.937 | 0.416 | 1.2e-182 | |
| TAIR|locus:2139885 | 1013 | AT4G28650 [Arabidopsis thalian | 0.928 | 0.938 | 0.350 | 2.3e-151 | |
| TAIR|locus:2161158 | 1041 | PXY "PHLOEM INTERCALATED WITH | 0.877 | 0.863 | 0.360 | 1.8e-149 | |
| TAIR|locus:2169965 | 1003 | BAM1 "BARELY ANY MERISTEM 1" [ | 0.915 | 0.934 | 0.364 | 8.1e-147 | |
| TAIR|locus:2024432 | 977 | LRR XI-23 [Arabidopsis thalian | 0.849 | 0.890 | 0.363 | 5.9e-144 | |
| TAIR|locus:2204350 | 980 | CLV1 "AT1G75820" [Arabidopsis | 0.892 | 0.932 | 0.351 | 2.6e-143 | |
| TAIR|locus:2207036 | 977 | AT1G72180 [Arabidopsis thalian | 0.845 | 0.886 | 0.363 | 6.8e-143 | |
| TAIR|locus:2120412 | 992 | BAM3 "BARELY ANY MERISTEM 3" [ | 0.902 | 0.931 | 0.356 | 8.6e-143 |
| TAIR|locus:2180617 AT5G25930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2924 (1034.4 bits), Expect = 1.0e-304, P = 1.0e-304
Identities = 576/1016 (56%), Positives = 727/1016 (71%)
Query: 10 KIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEIT 69
++P+ + L SIP V Q +++ LLNLK+ LG+PPSL+ W +TSSPC+W EIT
Sbjct: 3 RLPLPFLFFFLTSIPLSVFSQF---NDQSTLLNLKRDLGDPPSLRLWNNTSSPCNWSEIT 59
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
CT +VTGI+ ++++ T +P ICDL NL +DLS N GEFP LYNCTKLQ LDLS
Sbjct: 60 CTAGNVTGINFKNQNFTGTVPTTICDLSNLNFLDLSFNYFAGEFPTVLYNCTKLQYLDLS 119
Query: 130 QNYFVGPIPSDIDRISG-LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
QN G +P DIDR+S L +DL N FSGDIP+S+GR+S+L+ L LY +E++GTFP E
Sbjct: 120 QNLLNGSLPVDIDRLSPELDYLDLAANGFSGDIPKSLGRISKLKVLNLYQSEYDGTFPSE 179
Query: 189 IGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEI-PEAMSNLSSLEI 247
IGDLS LE L LA N F PA IPIEFG LKKLK +W+ E NLIGEI P N++ LE
Sbjct: 180 IGDLSELEELRLALNDKFTPAKIPIEFGKLKKLKYMWLEEMNLIGEISPVVFENMTDLEH 239
Query: 248 LALNGNHLEGAIPSGXXXXXXXXXXXXYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIP 307
+ L+ N+L G IP + N L+GEIP S+ A L +DLS NNLTGSIP
Sbjct: 240 VDLSVNNLTGRIPDVLFGLKNLTEFYLFANGLTGEIPKSISATNLVFLDLSANNLTGSIP 299
Query: 308 EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGF 367
G L LQ+L LF+N L+GE+P IGK+P LK+FK+FNN L+G +P EIG+HS LE F
Sbjct: 300 VSIGNLTKLQVLNLFNNKLTGEIPPVIGKLPGLKEFKIFNNKLTGEIPAEIGVHSKLERF 359
Query: 368 EVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 427
EVS NQ +G LPENLC GG LQGVV + NNL+G +P+SLG+C TL TVQL +N FSG+ P
Sbjct: 360 EVSENQLTGKLPENLCKGGKLQGVVVYSNNLTGEIPESLGDCGTLLTVQLQNNDFSGKFP 419
Query: 428 TGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKA 487
+ +W ++ SL +S+N+ +GELP AWN++R+EI NNRFSG+I + +G+W +L+ FKA
Sbjct: 420 SRIWNASSMYSLQVSNNSFTGELPENVAWNMSRIEIDNNRFSGEIPKKIGTWSSLVEFKA 479
Query: 488 SNNLFSGEIPVEXXXXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKA 547
NN FSGE P E D N L+G+LP +I+SW SL L+L++N+LSGEIP+A
Sbjct: 480 GNNQFSGEFPKELTSLSNLISIFLDENDLTGELPDEIISWKSLITLSLSKNKLSGEIPRA 539
Query: 548 IGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNN 607
+G L +++LDLS NQFSG IPPEIG LKL TFN+SSN+L G IP++ +NLAY+ SFLNN
Sbjct: 540 LGLLPRLLNLDLSENQFSGGIPPEIGSLKLTTFNVSSNRLTGGIPEQLDNLAYERSFLNN 599
Query: 608 SNLCVKNPIINLPKCPSRFRNSDKISSKHXXXXXXXXXXXXXXXXXXXWFVVRDCLRRKR 667
SNLC NP+++LP C + R S K +FVVRD R++R
Sbjct: 600 SNLCADNPVLSLPDCRKQRRGSRGFPGKILAMILVIAVLLLTITLFVTFFVVRDYTRKQR 659
Query: 668 NRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNN 727
R TWKLTSFH++ F ES+I+S+L E +IGSGGSG+VY+I + +G+ VAVKRIW++
Sbjct: 660 RRGLETWKLTSFHRVDFAESDIVSNLMEHYVIGSGGSGKVYKIFVESSGQCVAVKRIWDS 719
Query: 728 RKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKR 787
+KL+QKLEKEFIAE+EILGTIRH+NIVKL CCIS E+SKLLVYEY+E +SLD+WLHG+K+
Sbjct: 720 KKLDQKLEKEFIAEVEILGTIRHSNIVKLLCCISREDSKLLVYEYLEKRSLDQWLHGKKK 779
Query: 788 SLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847
+V + L W RL IA+GAAQGLCYMHHDCTP IIHRDVKSSNILLDSEF AK
Sbjct: 780 G-----GTVEANNLTWSQRLNIAVGAAQGLCYMHHDCTPAIIHRDVKSSNILLDSEFNAK 834
Query: 848 IADFGLAKMLAKQG-EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
IADFGLAK+L KQ EPHTMSAVAGSFGY APEYAYT+KV+EKID+YSFGVVLLELVTG+
Sbjct: 835 IADFGLAKLLIKQNQEPHTMSAVAGSFGYIAPEYAYTSKVDEKIDVYSFGVVLLELVTGR 894
Query: 907 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR 966
E N GDEHT+LA+W+W+HY KP +A D+ I E E MTTV++L L+CT+TLPS R
Sbjct: 895 EGNNGDEHTNLADWSWKHYQSGKPTAEAFDEDIKEASTTEAMTTVFKLGLMCTNTLPSHR 954
Query: 967 PSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFKRSKKVAAEEDNG 1022
PSMKEVL +LR+ E KK + APLL + L G + SK+V +ED G
Sbjct: 955 PSMKEVLYVLRQQ-GLE--ATKKTATEAYEAPLLVS---LSGRRTSKRVE-DEDLG 1003
|
|
| TAIR|locus:2032553 HSL1 "HAESA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1827 (648.2 bits), Expect = 1.8e-188, P = 1.8e-188
Identities = 411/964 (42%), Positives = 563/964 (58%)
Query: 39 ILLNLKQQLGNPPS-LQSWTST-SSPCDWPEITCT--FNSVTGISLRHKDITQKIPPIIC 94
IL +K L +P S L SW S +SPC W ++C F+SVT + L ++ P +IC
Sbjct: 22 ILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVIC 81
Query: 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
L NL + L +NSI P + C LQ LDLSQN G +P + I L +DL G
Sbjct: 82 RLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTG 141
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE 214
NNFSGDIP S G+ L+ L L N +GT P +G++S L++L L+YN F P+ IP E
Sbjct: 142 NNFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNP-FSPSRIPPE 200
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGXXXXXXXXXXXX 274
FG L L+ +W+TE +L+G+IP+++ LS L L L N L G IP
Sbjct: 201 FGNLTNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIEL 260
Query: 275 YDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPAS 333
Y+N L+GEIP + LK L +D SMN LTG IP+E ++ L+ L L+ N+L GE+PAS
Sbjct: 261 YNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP-LESLNLYENNLEGELPAS 319
Query: 334 IGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVA 393
I P L + ++F N L+G LP ++GL+S L +VS N+FSG LP +LCA G L+ ++
Sbjct: 320 IALSPNLYEIRIFGNRLTGGLPKDLGLNSPLRWLDVSENEFSGDLPADLCAKGELEELLI 379
Query: 394 FENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK 453
N+ SG +P+SL +CR+L ++L NRFSG +PTG W +++ L L +N+ SGE+ SK
Sbjct: 380 IHNSFSGVIPESLADCRSLTRIRLAYNRFSGSVPTGFWGLPHVNLLELVNNSFSGEI-SK 438
Query: 454 T---AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEXXXXXXXXXXX 510
+ A NL+ L +SNN F+G + +GS NL AS N FSG +P
Sbjct: 439 SIGGASNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLD 498
Query: 511 XDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP 570
GN+ SG+L S I SW LN LNLA NE +G+IP IGSL V+ LDLSGN FSG+IP
Sbjct: 499 LHGNQFSGELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPV 558
Query: 571 EIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSD 630
+ LKLN NLS N+L G++P Y +SF+ N LC I L C S N
Sbjct: 559 SLQSLKLNQLNLSYNRLSGDLPPSLAKDMYKNSFIGNPGLC--GDIKGL--CGSE--NEA 612
Query: 631 KISSKHXXXXXXXXXXXXXXXXXXXWFVVR-DCLRRKRNRDPATWKLTSFHQLGFTESNI 689
K WF + ++ R + + W L SFH+LGF+E I
Sbjct: 613 KKRGYVWLLRSIFVLAAMVLLAGVAWFYFKYRTFKKARAMERSKWTLMSFHKLGFSEHEI 672
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR-KLNQKLEKE----------- 737
L SL E N+IG+G SG+VY++ + GE VAVKR+W K + E
Sbjct: 673 LESLDEDNVIGAGASGKVYKVVLTN-GETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEA 731
Query: 738 FIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH 797
F AE+E LG IRH NIVKLWCC S+ + KLLVYEYM N SL LH K +
Sbjct: 732 FEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM-------- 783
Query: 798 QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
L W TR +I + AA+GL Y+HHD P I+HRD+KS+NIL+D ++ A++ADFG+AK +
Sbjct: 784 ---LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAV 840
Query: 858 AKQGE-PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYGDE 913
G+ P +MS +AGS GY APEYAYT +VNEK DIYSFGVV+LE+VT K + G++
Sbjct: 841 DLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEK 900
Query: 914 HTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
L +W ++K I +D + + C+ EE++ + + L+CTS LP +RPSM+ V+
Sbjct: 901 --DLVKWVCSTL-DQKGIEHVIDPKL-DSCFKEEISKILNVGLLCTSPLPINRPSMRRVV 956
Query: 974 QILR 977
++L+
Sbjct: 957 KMLQ 960
|
|
| TAIR|locus:2005540 HAE "HAESA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1772 (628.8 bits), Expect = 1.2e-182, P = 1.2e-182
Identities = 411/987 (41%), Positives = 574/987 (58%)
Query: 15 LILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPP-SLQSWTSTS--SPCDWPEITCT 71
LILL+ LS + +P ++ TIL K L +P SL SW+ + +PC W ++C
Sbjct: 5 LILLLCLSSTY--LPSLSLNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCD 62
Query: 72 FNS-VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN-CTKLQNLDLS 129
S V + L + P I+C L +L ++ L +NSI G ++ C L +LDLS
Sbjct: 63 ATSNVVSVDLSSFMLVGPFPSILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLDLS 122
Query: 130 QNYFVGPIPSDID-RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
+N VG IP + + L+ +++ GNN S IP S G +L++L L N +GT P
Sbjct: 123 ENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLSGTIPAS 182
Query: 189 IGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEIL 248
+G+++ L+ L LAYN F P+ IP + G L +L+ LW+ NL+G IP ++S L+SL L
Sbjct: 183 LGNVTTLKELKLAYNL-FSPSQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSLVNL 241
Query: 249 ALNGNHLEGAIPSGXXXXXXXXXXXXYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIP 307
L N L G+IPS ++N SGE+P S+ + L D SMN LTG IP
Sbjct: 242 DLTFNQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIP 301
Query: 308 EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGF 367
+ L NL+ L LF N L G +P SI + L + K+FNN L+GVLP ++G +S L+
Sbjct: 302 DNLNLL-NLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYV 360
Query: 368 EVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 427
++S N+FSG +P N+C G L+ ++ +N+ SG + +LG C++L V+L +N+ SG++P
Sbjct: 361 DLSYNRFSGEIPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIP 420
Query: 428 TGLWTTFNLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGVGSWKNLIV 484
G W LS L LSDN+ +G +P KT A NL+ L IS NRFSG I +GS +I
Sbjct: 421 HGFWGLPRLSLLELSDNSFTGSIP-KTIIGAKNLSNLRISKNRFSGSIPNEIGSLNGIIE 479
Query: 485 FKASNNLFSGEIPVEXXXXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEI 544
+ N FSGEIP N+LSG++P ++ W +LN LNLA N LSGEI
Sbjct: 480 ISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEI 539
Query: 545 PKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSF 604
PK +G L V+ LDLS NQFSGEIP E+ LKLN NLS N L G IP + N Y F
Sbjct: 540 PKEVGILPVLNYLDLSSNQFSGEIPLELQNLKLNVLNLSYNHLSGKIPPLYANKIYAHDF 599
Query: 605 LNNSNLCVKNPIINLPKCPSRFRNSDKISSKHXXXXXXXXXXXXXXXXXXXWFVVRDC-- 662
+ N LCV + L + +R +N + F+ + C
Sbjct: 600 IGNPGLCVD--LDGLCRKITRSKNIGYV----WILLTIFLLAGLVFVVGIVMFIAK-CRK 652
Query: 663 LRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVK 722
LR ++ A K SFH+L F+E I L E N+IG G SG+VY++++ G GE VAVK
Sbjct: 653 LRALKSSTLAASKWRSFHKLHFSEHEIADCLDEKNVIGFGSSGKVYKVELRG-GEVVAVK 711
Query: 723 RIWNNRK------LNQKLEKE-FIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775
++ + K + L ++ F AE+E LGTIRH +IV+LWCC SS + KLLVYEYM N
Sbjct: 712 KLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPN 771
Query: 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835
SL LHG ++ V VL WP RL+IA+ AA+GL Y+HHDC P I+HRDVKS
Sbjct: 772 GSLADVLHGDRKGGV---------VLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKS 822
Query: 836 SNILLDSEFKAKIADFGLAKMLAKQGE--PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIY 893
SNILLDS++ AK+ADFG+AK+ G P MS +AGS GY APEY YT +VNEK DIY
Sbjct: 823 SNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIY 882
Query: 894 SFGVVLLELVTGKE---ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTT 950
SFGVVLLELVTGK+ + GD+ +A+W ++ + +D + + + EE++
Sbjct: 883 SFGVVLLELVTGKQPTDSELGDK--DMAKWVCTAL-DKCGLEPVIDPKL-DLKFKEEISK 938
Query: 951 VYRLALICTSTLPSSRPSMKEVLQILR 977
V + L+CTS LP +RPSM++V+ +L+
Sbjct: 939 VIHIGLLCTSPLPLNRPSMRKVVIMLQ 965
|
|
| TAIR|locus:2139885 AT4G28650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 350/999 (35%), Positives = 533/999 (53%)
Query: 10 KIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPS-LQSW--TSTSSPCDWP 66
KI V + + V+ N E ++LL++K L +P + L+ W + TS C+W
Sbjct: 4 KIIVLFLYYCYIGSTSSVLASIDNVNELSVLLSVKSTLVDPLNFLKDWKLSDTSDHCNWT 63
Query: 67 EITCTFN-SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
+ C N +V + L ++T KI I L +L + ++S N P+ + L++
Sbjct: 64 GVRCNSNGNVEKLDLAGMNLTGKISDSISQLSSLVSFNISCNGFESLLPKSI---PPLKS 120
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
+D+SQN F G + + GL ++ GNN SG++ +G L L+ L L N F G+
Sbjct: 121 IDISQNSFSGSLFLFSNESLGLVHLNASGNNLSGNLTEDLGNLVSLEVLDLRGNFFQGSL 180
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL 245
P +L L LGL+ N+ +P G L L+T + G IP N++SL
Sbjct: 181 PSSFKNLQKLRFLGLSGNN--LTGELPSVLGQLPSLETAILGYNEFKGPIPPEFGNINSL 238
Query: 246 EILALNGNHLEGAIPSGXXXXXXXXXXXXYDNILSGEIPSSVEALK-LTDIDLSMNNLTG 304
+ L L L G IPS Y+N +G IP + ++ L +D S N LTG
Sbjct: 239 KYLDLAIGKLSGEIPSELGKLKSLETLLLYENNFTGTIPREIGSITTLKVLDFSDNALTG 298
Query: 305 SIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSAL 364
IP E KLKNLQLL L N LSG +P +I + L+ +++NN+LSG LP ++G +S L
Sbjct: 299 EIPMEITKLKNLQLLNLMRNKLSGSIPPAISSLAQLQVLELWNNTLSGELPSDLGKNSPL 358
Query: 365 EGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG 424
+ +VS+N FSG +P LC G L ++ F N +G +P +L C++L V++ +N +G
Sbjct: 359 QWLDVSSNSFSGEIPSTLCNKGNLTKLILFNNTFTGQIPATLSTCQSLVRVRMQNNLLNG 418
Query: 425 ELPTGLWTTFNLSSLMLSDNTISGELPS--KTAWNLTRLEISNNRFSGQIQRGVGSWKNL 482
+P G L L L+ N +SG +P + +L+ ++ S N+ + + S NL
Sbjct: 419 SIPIGFGKLEKLQRLELAGNRLSGGIPGDISDSVSLSFIDFSRNQIRSSLPSTILSIHNL 478
Query: 483 IVFKASNNLFSGEIPVEXXXXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSG 542
F ++N SGE+P + N L+G +PS I S L +LNL N L+G
Sbjct: 479 QAFLVADNFISGEVPDQFQDCPSLSNLDLSSNTLTGTIPSSIASCEKLVSLNLRNNNLTG 538
Query: 543 EIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIP-DEFNNLAY 600
EIP+ I ++ + LDLS N +G +P IG L N+S NKL G +P + F
Sbjct: 539 EIPRQITTMSALAVLDLSNNSLTGVLPESIGTSPALELLNVSYNKLTGPVPINGFLKTIN 598
Query: 601 DDSFLNNSNLCVKNPIINLPKCPSRF-RNSDKISSKH------------XXXXXXXXXXX 647
D NS LC + LP C S+F R + SS H
Sbjct: 599 PDDLRGNSGLC--GGV--LPPC-SKFQRATSSHSSLHGKRIVAGWLIGIASVLALGILTI 653
Query: 648 XXXXXXXXWFVVRDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQV 707
W+ C ++ W+L +FH+LGFT S+IL+ + ESN+IG G +G V
Sbjct: 654 VTRTLYKKWYSNGFCGDETASKGEWPWRLMAFHRLGFTASDILACIKESNMIGMGATGIV 713
Query: 708 YRIDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766
Y+ +++ + +AVK++W + + +F+ E+ +LG +RH NIV+L + ++ +
Sbjct: 714 YKAEMSRSSTVLAVKKLWRSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLLGFLYNDKNM 773
Query: 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTP 826
++VYE+M N +L +HG+ +G + ++ W +R IA+G A GL Y+HHDC P
Sbjct: 774 MIVYEFMLNGNLGDAIHGKN---AAG-----RLLVDWVSRYNIALGVAHGLAYLHHDCHP 825
Query: 827 QIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV 886
+IHRD+KS+NILLD+ A+IADFGLA+M+A++ E T+S VAGS+GY APEY YT KV
Sbjct: 826 PVIHRDIKSNNILLDANLDARIADFGLARMMARKKE--TVSMVAGSYGYIAPEYGYTLKV 883
Query: 887 NEKIDIYSFGVVLLELVTGK---EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPC 943
+EKIDIYS+GVVLLEL+TG+ E +G E + EW R + + +ALD +
Sbjct: 884 DEKIDIYSYGVVLLELLTGRRPLEPEFG-ESVDIVEWVRRKIRDNISLEEALDPNVGNCR 942
Query: 944 YL-EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
Y+ EEM V ++AL+CT+ LP RPSM++V+ +L P
Sbjct: 943 YVQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAKP 981
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| TAIR|locus:2161158 PXY "PHLOEM INTERCALATED WITH XYLEM" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1459 (518.7 bits), Expect = 1.8e-149, P = 1.8e-149
Identities = 344/954 (36%), Positives = 517/954 (54%)
Query: 63 CDWPEITC--TFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNC 120
C W + C V + L H++++ +IP I L +L ++LS NS+ G FP +++
Sbjct: 69 CSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQIRYLSSLLYLNLSGNSLEGSFPTSIFDL 128
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNE 180
TKL LD+S+N F P I ++ L+ + NNF G +P + RL L+ L +
Sbjct: 129 TKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEGLLPSDVSRLRFLEELNFGGSY 188
Query: 181 FNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS 240
F G P G L L+ + LA N +P G+L +L+ + + + G IP +
Sbjct: 189 FEGEIPAAYGGLQRLKFIHLA--GNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFA 246
Query: 241 NLSSLEILALNGNHLEGAIPSGXXXXXXXXXXXXYDNILSGEIPSSVEALK-LTDIDLSM 299
LS+L+ ++ L G++P + N +GEIP S LK L +D S
Sbjct: 247 LLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSS 306
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N L+GSIP F LKNL L L SN+LSGEVP IG++P L ++NN+ +GVLP ++G
Sbjct: 307 NQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLG 366
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
+ LE +VS N F+G +P +LC G L ++ F N G +PKSL C +L + +
Sbjct: 367 SNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQN 426
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK--TAWNLTRLEISNNRFSGQIQRGVG 477
NR +G +P G + NL+ + LS+N + ++P+ TA L L +S N F ++ +
Sbjct: 427 NRLNGTIPIGFGSLRNLTFVDLSNNRFTDQIPADFATAPVLQYLNLSTNFFHRKLPENIW 486
Query: 478 SWKNLIVFKASNNLFSGEIPVEXXXXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLAR 537
NL +F AS + GEIP GN L+G +P I L LNL++
Sbjct: 487 KAPNLQIFSASFSNLIGEIP-NYVGCKSFYRIELQGNSLNGTIPWDIGHCEKLLCLNLSQ 545
Query: 538 NELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPD-EF 595
N L+G IP I +L + +DLS N +G IP + G K + TFN+S N+L G IP F
Sbjct: 546 NHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSSKTITTFNVSYNQLIGPIPSGSF 605
Query: 596 NNLAYDDSFLNNSNLCVKNPIINLPKCPSRFR--NSDKISSKHXXXXXXXXXXXX----X 649
+L F +N LC ++ P RF N+D I H
Sbjct: 606 AHLN-PSFFSSNEGLC--GDLVGKPCNSDRFNAGNAD-IDGHHKEERPKKTAGAIVWILA 661
Query: 650 XXXXXXWFVV---RDCLRRKR-NR---------DPATWKLTSFHQLGFTESNILSSLTES 696
+FV+ C ++ NR D WKLT+F +L FT +++ L+++
Sbjct: 662 AAIGVGFFVLVAATRCFQKSYGNRVDGGGRNGGDIGPWKLTAFQRLNFTADDVVECLSKT 721
Query: 697 -NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE---FIAEIEILGTIRHAN 752
N++G G +G VY+ ++ GE +AVK++W K N K+ + +AE+++LG +RH N
Sbjct: 722 DNILGMGSTGTVYKAEMPN-GEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRN 780
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV+L C ++ + +L+YEYM N SLD LHG +++ + + W QIAIG
Sbjct: 781 IVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAE--------WTALYQIAIG 832
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
AQG+CY+HHDC P I+HRD+K SNILLD++F+A++ADFG+AK++ +MS VAGS
Sbjct: 833 VAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTD---ESMSVVAGS 889
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYGDEHTSLAEWAWRHYAEEK 929
+GY APEYAYT +V++K DIYS+GV+LLE++TGK E +G E S+ +W ++
Sbjct: 890 YGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFG-EGNSIVDWVRSKLKTKE 948
Query: 930 PITDALDKGIAEPCYL--EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
+ + LDK + C L EEM + R+AL+CTS P+ RP M++VL IL+ P
Sbjct: 949 DVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKP 1002
|
|
| TAIR|locus:2169965 BAM1 "BARELY ANY MERISTEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1434 (509.9 bits), Expect = 8.1e-147, P = 8.1e-147
Identities = 359/986 (36%), Positives = 530/986 (53%)
Query: 15 LILLVLLSIPFEVIPQSPNTEERTILLNLKQQL-G-----NPPSLQSWTSTSSPCDWPEI 68
L+LL LL I P +E R LL+LK L G N P L SW ++S C W +
Sbjct: 5 LLLLFLLHISHTFTASRPISEFRA-LLSLKTSLTGAGDDKNSP-LSSWKVSTSFCTWIGV 62
Query: 69 TCTFNS--VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNL 126
TC + VT + L +++ + P + L+ L + L+ N I G P + + + L++L
Sbjct: 63 TCDVSRRHVTSLDLSGLNLSGTLSPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHL 122
Query: 127 DLSQNYFVGPIPSDIDR-ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
+LS N F G P +I + L+ +D+ NN +GD+P S+ L++L+ L+L N F G
Sbjct: 123 NLSNNVFNGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKI 182
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE-IPEAMSNLSS 244
P G +E L A + N IP E G L L+ L++ N + +P + NLS
Sbjct: 183 PPSYGSWPVIEYL--AVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDGLPPEIGNLS- 239
Query: 245 LEILALNGNH--LEGAIPSGXXXXXXXXXXXXYDNILSGEIPSSVEALK-LTDIDLSMNN 301
E++ +G + L G IP N+ SG + + L L +DLS N
Sbjct: 240 -ELVRFDGANCGLTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKSMDLSNNM 298
Query: 302 LTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLH 361
TG IP F +LKNL LL LF N L GE+P IG +P L+ +++ N+ +G +P ++G +
Sbjct: 299 FTGEIPASFAELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGEN 358
Query: 362 SALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNR 421
L ++S+N+ +G LP N+C+G L+ ++ N L G++P SLG C +L +++ N
Sbjct: 359 GKLNLVDLSSNKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLTRIRMGENF 418
Query: 422 FSGELPTGLWTTFNLSSLMLSDNTISGELP--SKTAWNLTRLEISNNRFSGQIQRGVGSW 479
+G +P GL+ L+ + L DN +SGELP + NL ++ +SNN+ SG + +G++
Sbjct: 419 LNGSIPKGLFGLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNNQLSGPLPPAIGNF 478
Query: 480 KNLIVFKASNNLFSGEIPVEXXXXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
+ N F G IP E N SG++ +I L ++L+RNE
Sbjct: 479 TGVQKLLLDGNKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLLTFVDLSRNE 538
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPD--EFN 596
LSGEIP I ++ ++ L+LS N G IP I ++ L + + S N L G +P +F+
Sbjct: 539 LSGEIPNEITAMKILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSGLVPGTGQFS 598
Query: 597 NLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHXXXXXXXXXXXXXXXXXXXW 656
Y SFL N +LC P + P + + SK
Sbjct: 599 YFNYT-SFLGNPDLC--GPYLG-PCKDGVAKGGHQSHSKGPLSASMKLLLVLGLLVCSIA 654
Query: 657 FVVRDCLRR---KRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDIN 713
F V ++ K+ + W+LT+F +L FT ++L SL E N+IG GG+G VY+ +
Sbjct: 655 FAVVAIIKARSLKKASESRAWRLTAFQRLDFTCDDVLDSLKEDNIIGKGGAGIVYK-GVM 713
Query: 714 GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 773
G+ VAVKR+ + + F AEI+ LG IRH +IV+L S+ + LLVYEYM
Sbjct: 714 PNGDLVAVKRLAAMSR-GSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYM 772
Query: 774 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 833
N SL LHG+K G H LHW TR +IA+ AA+GLCY+HHDC+P I+HRDV
Sbjct: 773 PNGSLGEVLHGKK----GG----H---LHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDV 821
Query: 834 KSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIY 893
KS+NILLDS F+A +ADFGLAK L G MSA+AGS+GY APEYAYT KV+EK D+Y
Sbjct: 822 KSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVY 881
Query: 894 SFGVVLLELVTGKE--ANYGDEHTSLAEWAWRHYAEEKP-ITDALDKGIAEPCYLEEMTT 950
SFGVVLLELVTG++ +GD + +W + K + LD ++ + E+T
Sbjct: 882 SFGVVLLELVTGRKPVGEFGDG-VDIVQWVRKMTDSNKDSVLKVLDPRLSS-IPIHEVTH 939
Query: 951 VYRLALICTSTLPSSRPSMKEVLQIL 976
V+ +A++C RP+M+EV+QIL
Sbjct: 940 VFYVAMLCVEEQAVERPTMREVVQIL 965
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| TAIR|locus:2024432 LRR XI-23 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 335/922 (36%), Positives = 502/922 (54%)
Query: 92 IICDLK-NLTTIDLSSNSIPGEFP-EFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQC 149
+ C+ + N+T IDLS + G FP + + L+ L L N G IPSD+ + L+
Sbjct: 66 VTCNSRGNVTEIDLSRRGLSGNFPFDSVCEIQSLEKLSLGFNSLSGIIPSDLKNCTSLKY 125
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFP-KEIGDLSNLEVLGLAYNSNFKP 208
+DLG N FSG P L++LQ LYL + F+G FP K + + ++L VL L N
Sbjct: 126 LDLGNNLFSGAFPE-FSSLNQLQFLYLNNSAFSGVFPWKSLRNATSLVVLSLGDNPFDAT 184
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGXXXXXX 268
A P+E LKKL L+++ ++ G+IP A+ +L+ L L ++ + L G IPS
Sbjct: 185 ADFPVEVVSLKKLSWLYLSNCSIAGKIPPAIGDLTELRNLEISDSGLTGEIPSEISKLTN 244
Query: 269 XXXXXXYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
Y+N L+G++P+ LK LT +D S N L G + E L NL L +F N S
Sbjct: 245 LWQLELYNNSLTGKLPTGFGNLKNLTYLDASTNLLQGDL-SELRSLTNLVSLQMFENEFS 303
Query: 328 GEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387
GE+P G+ L ++ N L+G LP +G + + + S N +GP+P ++C G
Sbjct: 304 GEIPLEFGEFKDLVNLSLYTNKLTGSLPQGLGSLADFDFIDASENLLTGPIPPDMCKNGK 363
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
++ ++ +NNL+G++P+S NC TL+ ++ N +G +P GLW L + + N
Sbjct: 364 MKALLLLQNNLTGSIPESYANCLTLQRFRVSENNLNGTVPAGLWGLPKLEIIDIEMNNFE 423
Query: 448 GELPS--KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEXXXXXX 505
G + + K L L + N+ S ++ +G ++L + +NN F+G+IP
Sbjct: 424 GPITADIKNGKMLGALYLGFNKLSDELPEEIGDTESLTKVELNNNRFTGKIPSSIGKLKG 483
Query: 506 XXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
N SG++P I S + L+++N+A+N +SGEIP +GSL + +L+LS N+ S
Sbjct: 484 LSSLKMQSNGFSGEIPDSIGSCSMLSDVNMAQNSISGEIPHTLGSLPTLNALNLSDNKLS 543
Query: 566 GEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKC--P 623
G IP + L+L+ +LS+N+L G IP ++ Y+ SF N LC I + +C P
Sbjct: 544 GRIPESLSSLRLSLLDLSNNRLSGRIPLSLSS--YNGSFNGNPGLC-STTIKSFNRCINP 600
Query: 624 SRFRNSDKISSKHXXXXXXXXXXXXXXXXXXXWFVVRDCLRRKRNRD--PATWKLTSFHQ 681
SR ++ +F+ +K R +W + SF +
Sbjct: 601 SRSHGDTRV------FVLCIVFGLLILLASLVFFLYLKKTEKKEGRSLKHESWSIKSFRK 654
Query: 682 LGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIW--NNRK--------LN 731
+ FTE +I+ S+ E NLIG GG G VYR+ + G G+ VAVK I + +K L
Sbjct: 655 MSFTEDDIIDSIKEENLIGRGGCGDVYRV-VLGDGKEVAVKHIRCSSTQKNFSSAMPILT 713
Query: 732 QK--LEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSL 789
++ KEF E++ L +IRH N+VKL+C I+S++S LLVYEY+ N SL LH K+S
Sbjct: 714 EREGRSKEFETEVQTLSSIRHLNVVKLYCSITSDDSSLLVYEYLPNGSLWDMLHSCKKSN 773
Query: 790 VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849
L W TR IA+GAA+GL Y+HH +IHRDVKSSNILLD K +IA
Sbjct: 774 -----------LGWETRYDIALGAAKGLEYLHHGYERPVIHRDVKSSNILLDEFLKPRIA 822
Query: 850 DFGLAKML-AKQGEPHTMSAVAGSFGYFAP-EYAYTTKVNEKIDIYSFGVVLLELVTGK- 906
DFGLAK+L A G P + VAG++GY AP EY Y +KV EK D+YSFGVVL+ELVTGK
Sbjct: 823 DFGLAKILQASNGGPESTHVVAGTYGYIAPAEYGYASKVTEKCDVYSFGVVLMELVTGKK 882
Query: 907 --EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPS 964
EA +G E + W + ++ + + +DK I E Y E+ + R+A+ICT+ LP
Sbjct: 883 PIEAEFG-ESKDIVNWVSNNLKSKESVMEIVDKKIGE-MYREDAVKMLRIAIICTARLPG 940
Query: 965 SRPSMKEVLQILRRCCPTENYG 986
RP+M+ V+Q++ P G
Sbjct: 941 LRPTMRSVVQMIEDAEPCRLMG 962
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| TAIR|locus:2204350 CLV1 "AT1G75820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 338/962 (35%), Positives = 527/962 (54%)
Query: 39 ILLNLKQQLGNPPS--LQSWTSTSSP---CDWPEITCTFNS-VTGISLRHKDITQKIPPI 92
+LLNLK + P L W +SSP C + ++C ++ V +++ + I P
Sbjct: 30 VLLNLKSSMIGPKGHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPE 89
Query: 93 ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN-YFVGPIPSDIDR-ISGLQCI 150
I L +L + L++N+ GE P + + T L+ L++S N G P +I + + L+ +
Sbjct: 90 IGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVL 149
Query: 151 DLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAM 210
D NNF+G +P + L +L+ L N F+G P+ GD+ +LE LGL N
Sbjct: 150 DTYNNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGL--NGAGLSGK 207
Query: 211 IPIEFGMLKKLKTLWMTEAN-LIGEIPEAMSNLSSLEILALNGNHLEGAIPSGXXXXXXX 269
P LK L+ +++ N G +P L+ LEIL + L G IP+
Sbjct: 208 SPAFLSRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTSLSNLKHL 267
Query: 270 XXXXXYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
+ N L+G IP + L L +DLS+N LTG IP+ F L N+ L+ LF N+L G
Sbjct: 268 HTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINLFRNNLYG 327
Query: 329 EVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
++P +IG++P L+ F+V+ N+ + LP +G + L +VS N +G +P++LC G L
Sbjct: 328 QIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLIKLDVSDNHLTGLIPKDLCRGEKL 387
Query: 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISG 448
+ ++ N G +P+ LG C++L +++ N +G +P GL+ ++ + L+DN SG
Sbjct: 388 EMLILSNNFFFGPIPEELGKCKSLTKIRIVKNLLNGTVPAGLFNLPLVTIIELTDNFFSG 447
Query: 449 ELPSKTAWN-LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEXXXXXXXX 507
ELP + + L ++ +SNN FSG+I +G++ NL N F G IP E
Sbjct: 448 ELPVTMSGDVLDQIYLSNNWFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPREIFELKHLS 507
Query: 508 XXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 567
N ++G +P I ++L +++L+RN ++GEIPK I ++ + +L++SGNQ +G
Sbjct: 508 RINTSANNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGS 567
Query: 568 IPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSR- 625
IP IG + L T +LS N L G +P L ++++ N + P + CP+R
Sbjct: 568 IPTGIGNMTSLTTLDLSFNDLSGRVPLGGQFLVFNETSFAG-NTYLCLP--HRVSCPTRP 624
Query: 626 FRNSDKISSKHXXXXXXXXXXXXXXXXXXXWFVVRDCLR---RKRNRDPATWKLTSFHQL 682
+ SD H ++ +R +K+N+ WKLT+F +L
Sbjct: 625 GQTSDH---NHTALFSPSRIVITVIAAITGLILISVAIRQMNKKKNQKSLAWKLTAFQKL 681
Query: 683 GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEI 742
F ++L L E N+IG GG+G VYR + + VA+KR+ + + F AEI
Sbjct: 682 DFKSEDVLECLKEENIIGKGGAGIVYRGSMPNNVD-VAIKRLVGRG--TGRSDHGFTAEI 738
Query: 743 EILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+ LG IRH +IV+L ++++++ LL+YEYM N SL LHG K G H L
Sbjct: 739 QTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSK----GG----H---LQ 787
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
W TR ++A+ AA+GLCY+HHDC+P I+HRDVKS+NILLDS+F+A +ADFGLAK L
Sbjct: 788 WETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAA 847
Query: 863 PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE--ANYGDEHTSLAEW 920
MS++AGS+GY APEYAYT KV+EK D+YSFGVVLLEL+ GK+ +G E + W
Sbjct: 848 SECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFG-EGVDIVRW 906
Query: 921 AWRHYAEE--KPITDALDKGIAEPC---Y-LEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
R+ EE +P A+ I +P Y L + V+++A++C ++RP+M+EV+
Sbjct: 907 V-RNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVH 965
Query: 975 IL 976
+L
Sbjct: 966 ML 967
|
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| TAIR|locus:2207036 AT1G72180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1397 (496.8 bits), Expect = 6.8e-143, P = 6.8e-143
Identities = 331/911 (36%), Positives = 508/911 (55%)
Query: 92 IICD-LKN-LTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQC 149
I CD L + I L + ++ G + TKL L L N+ G IP +I L+
Sbjct: 67 ITCDPLSGEVIGISLGNVNLSGTISPSISALTKLSTLSLPSNFISGRIPPEIVNCKNLKV 126
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
++L N SG IP ++ L L+ L + N NG F IG+++ L LGL N++++
Sbjct: 127 LNLTSNRLSGTIP-NLSPLKSLEILDISGNFLNGEFQSWIGNMNQLVSLGLG-NNHYEEG 184
Query: 210 MIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGXXXXXXX 269
+IP G LKKL L++ +NL G+IP ++ +L++L+ + N + P
Sbjct: 185 IIPESIGGLKKLTWLFLARSNLTGKIPNSIFDLNALDTFDIANNAISDDFPILISRLVNL 244
Query: 270 XXXXXYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
++N L+G+IP ++ L +L + D+S N L+G +PEE G LK L++ N+ +G
Sbjct: 245 TKIELFNNSLTGKIPPEIKNLTRLREFDISSNQLSGVLPEELGVLKELRVFHCHENNFTG 304
Query: 329 EVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
E P+ G + L ++ N+ SG P IG S L+ ++S N+F+GP P LC L
Sbjct: 305 EFPSGFGDLSHLTSLSIYRNNFSGEFPVNIGRFSPLDTVDISENEFTGPFPRFLCQNKKL 364
Query: 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISG 448
Q ++A +N SG +P+S G C++L +++ +NR SG++ G W+ + LSDN ++G
Sbjct: 365 QFLLALQNEFSGEIPRSYGECKSLLRLRINNNRLSGQVVEGFWSLPLAKMIDLSDNELTG 424
Query: 449 ELPSKTAWN--LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEXXXXXXX 506
E+ + + L++L + NNRFSG+I R +G N+ SNN SGEIP+E
Sbjct: 425 EVSPQIGLSTELSQLILQNNRFSGKIPRELGRLTNIERIYLSNNNLSGEIPMEVGDLKEL 484
Query: 507 XXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 566
+ N L+G +P ++ + L +LNLA+N L+GEIP ++ + + SLD SGN+ +G
Sbjct: 485 SSLHLENNSLTGFIPKELKNCVKLVDLNLAKNFLTGEIPNSLSQIASLNSLDFSGNRLTG 544
Query: 567 EIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVK------NPIINLP 620
EIP + +LKL+ +LS N+L G IP + + +F N LCV N + L
Sbjct: 545 EIPASLVKLKLSFIDLSGNQLSGRIPPDLLAVGGSTAFSRNEKLCVDKENAKTNQNLGLS 604
Query: 621 KCPSRFRNSDKISSKHXXXXXXXXXXXX----XXXXXXXWFVVR----DCLRRKRNRDPA 672
C S ++N + SS + VV+ D R N+ A
Sbjct: 605 IC-SGYQNVKRNSSLDGTLLFLALAIVVVVLVSGLFALRYRVVKIRELDSENRDINKADA 663
Query: 673 TWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ 732
WK+ SFHQ+ I L E ++IGSG +G+VYR+D+ G VAVK W R +
Sbjct: 664 KWKIASFHQMELDVDEICR-LDEDHVIGSGSAGKVYRVDLKKGGGTVAVK--WLKRGGGE 720
Query: 733 KLE--KEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLV 790
+ + + +AE+EILG IRH N++KL+ C+ S+ LV+E+MEN +L + L G +
Sbjct: 721 EGDGTEVSVAEMEILGKIRHRNVLKLYACLVGRGSRYLVFEFMENGNLYQAL-GNN---I 776
Query: 791 SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850
G L W R +IA+GAA+G+ Y+HHDC P IIHRD+KSSNILLD ++++KIAD
Sbjct: 777 KGGLPE----LDWLKRYKIAVGAAKGIAYLHHDCCPPIIHRDIKSSNILLDGDYESKIAD 832
Query: 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG---KE 907
FG+AK+ A +G + S VAG+ GY APE AY+ K EK D+YSFGVVLLELVTG E
Sbjct: 833 FGVAKV-ADKG--YEWSCVAGTHGYMAPELAYSFKATEKSDVYSFGVVLLELVTGLRPME 889
Query: 908 ANYGDEHTSLAEWAWRHYAEE-KPITDALDKGIAEPCYLEE-MTTVYRLALICTSTLPSS 965
+G E + ++ + ++ + + + LDK + Y+EE M V ++ L+CT+ LP+
Sbjct: 890 DEFG-EGKDIVDYVYSQIQQDPRNLQNVLDKQVLST-YIEESMIRVLKMGLLCTTKLPNL 947
Query: 966 RPSMKEVLQIL 976
RPSM+EV++ L
Sbjct: 948 RPSMREVVRKL 958
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| TAIR|locus:2120412 BAM3 "BARELY ANY MERISTEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1396 (496.5 bits), Expect = 8.6e-143, P = 8.6e-143
Identities = 345/967 (35%), Positives = 525/967 (54%)
Query: 36 ERTILLNLKQQLGN-PPSLQSWT--STSSPCDWPEITC-TFN-SVTGISLRHKDITQKIP 90
+ +L++LKQ + PSL SW + +S C W ++C N S+T + L + +I+ I
Sbjct: 34 QANVLISLKQSFDSYDPSLDSWNIPNFNSLCSWTGVSCDNLNQSITRLDLSNLNISGTIS 93
Query: 91 PIICDLK-NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPS-DIDRISGLQ 148
P I L +L +D+SSNS GE P+ +Y + L+ L++S N F G + + +++ L
Sbjct: 94 PEISRLSPSLVFLDISSNSFSGELPKEIYELSGLEVLNISSNVFEGELETRGFSQMTQLV 153
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
+D N+F+G +P S+ L+ L+ L L N F+G P+ G +L+ L L+ N
Sbjct: 154 TLDAYDNSFNGSLPLSLTTLTRLEHLDLGGNYFDGEIPRSYGSFLSLKFLSLSGND--LR 211
Query: 209 AMIPIEFGMLKKLKTLWMTEAN-LIGEIPEAMSNLSSLEILALNGNHLEGAIPSGXXXXX 267
IP E + L L++ N G IP L +L L L L+G+IP+
Sbjct: 212 GRIPNELANITTLVQLYLGYYNDYRGGIPADFGRLINLVHLDLANCSLKGSIPAELGNLK 271
Query: 268 XXXXXXXYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
N L+G +P + + L +DLS N L G IP E L+ LQL LF N L
Sbjct: 272 NLEVLFLQTNELTGSVPRELGNMTSLKTLDLSNNFLEGEIPLELSGLQKLQLFNLFFNRL 331
Query: 327 SGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGG 386
GE+P + ++P L+ K+++N+ +G +P ++G + L ++STN+ +G +PE+LC G
Sbjct: 332 HGEIPEFVSELPDLQILKLWHNNFTGKIPSKLGSNGNLIEIDLSTNKLTGLIPESLCFGR 391
Query: 387 VLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 446
L+ ++ F N L G +P+ LG C L +L N + +LP GL NLS L L +N +
Sbjct: 392 RLKILILFNNFLFGPLPEDLGQCEPLWRFRLGQNFLTSKLPKGLIYLPNLSLLELQNNFL 451
Query: 447 SGELPSKTAWN-----LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEXX 501
+GE+P + A N LT++ +SNNR SG I + + ++L + N SG+IP E
Sbjct: 452 TGEIPEEEAGNAQFSSLTQINLSNNRLSGPIPGSIRNLRSLQILLLGANRLSGQIPGEIG 511
Query: 502 XXXXXXXXXXDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSG 561
N SGK P + SL L+L+ N++SG+IP I + ++ L++S
Sbjct: 512 SLKSLLKIDMSRNNFSGKFPPEFGDCMSLTYLDLSHNQISGQIPVQISQIRILNYLNVSW 571
Query: 562 NQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAY--DDSFLNNSNLC--VKNPI 616
N F+ +P E+G +K L + + S N G++P +Y + SFL N LC NP
Sbjct: 572 NSFNQSLPNELGYMKSLTSADFSHNNFSGSVPTS-GQFSYFNNTSFLGNPFLCGFSSNPC 630
Query: 617 INLP-KCPSRFRNSDKISSKHXXXXXXXXXXXXXXXXXXXWFVVRDCL--RRKRNRDPAT 673
+ S+ N + S+ FVV + RR R +P
Sbjct: 631 NGSQNQSQSQLLNQNNARSRGEISAKFKLFFGLGLLGFFLVFVVLAVVKNRRMRKNNPNL 690
Query: 674 WKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK 733
WKL F +LGF +IL + E+++IG GG G VY+ + GE VAVK++ K
Sbjct: 691 WKLIGFQKLGFRSEHILECVKENHVIGKGGRGIVYK-GVMPNGEEVAVKKLLTITK-GSS 748
Query: 734 LEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS 793
+ AEI+ LG IRH NIV+L S+++ LLVYEYM N SL LHG+
Sbjct: 749 HDNGLAAEIQTLGRIRHRNIVRLLAFCSNKDVNLLVYEYMPNGSLGEVLHGK-------- 800
Query: 794 SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL 853
+ V L W TRLQIA+ AA+GLCY+HHDC+P IIHRDVKS+NILL EF+A +ADFGL
Sbjct: 801 AGVF---LKWETRLQIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLGPEFEAHVADFGL 857
Query: 854 AK-MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA--NY 910
AK M+ G MS++AGS+GY APEYAYT +++EK D+YSFGVVLLEL+TG++ N+
Sbjct: 858 AKFMMQDNGASECMSSIAGSYGYIAPEYAYTLRIDEKSDVYSFGVVLLELITGRKPVDNF 917
Query: 911 GDEHTSLAEWAW-RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
G+E + +W+ + + + +D+ ++ L E ++ +A++C RP+M
Sbjct: 918 GEEGIDIVQWSKIQTNCNRQGVVKIIDQRLSN-IPLAEAMELFFVAMLCVQEHSVERPTM 976
Query: 970 KEVLQIL 976
+EV+Q++
Sbjct: 977 REVVQMI 983
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.914 |
| 3rd Layer | 2.7.11 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.867.6.1 | hypothetical protein (956 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1024 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-170 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-44 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-42 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-40 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 7e-40 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 7e-39 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-37 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-36 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-36 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-35 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-35 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-33 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-29 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-28 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-27 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-26 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-26 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-25 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-25 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-25 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-25 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 8e-25 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-24 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-24 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-24 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-24 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 6e-24 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 9e-24 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-23 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-23 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-23 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 1e-22 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-22 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-22 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 5e-22 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-22 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-21 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-21 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 7e-21 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 7e-21 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-21 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 9e-21 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-20 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-20 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-20 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-20 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-20 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-20 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-20 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 5e-20 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 5e-20 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-20 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 6e-20 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-19 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-19 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-19 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 3e-19 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-19 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-19 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 4e-19 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-19 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-19 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 7e-19 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 9e-19 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 2e-18 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-18 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-18 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 3e-18 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 7e-18 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 8e-18 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 1e-17 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-17 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-17 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-17 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 3e-17 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-17 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-17 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 5e-17 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-17 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 6e-17 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 7e-17 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-16 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-16 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-16 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-16 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 2e-16 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 2e-16 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-16 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 3e-16 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 3e-16 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-16 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 4e-16 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-16 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 5e-16 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-16 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 5e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-16 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 6e-16 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-16 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-15 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-15 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-15 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-15 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-15 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 2e-15 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-15 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-15 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 3e-15 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-15 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 3e-15 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-15 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 3e-15 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 7e-15 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 7e-15 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 8e-15 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-14 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-14 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 1e-14 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-14 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 1e-14 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-14 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-14 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-14 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-14 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-14 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-14 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-14 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 3e-14 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 3e-14 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-14 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 4e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-14 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 5e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 5e-14 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-14 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 6e-14 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 6e-14 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 7e-14 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 7e-14 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 8e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 9e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 9e-14 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 9e-14 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 9e-14 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-13 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-13 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-13 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-13 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 2e-13 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-13 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 3e-13 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-13 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 3e-13 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-13 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-13 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 4e-13 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 4e-13 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 5e-13 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 6e-13 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 6e-13 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 7e-13 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 7e-13 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 7e-13 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 8e-13 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 8e-13 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 8e-13 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 8e-13 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 9e-13 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-12 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-12 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 1e-12 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-12 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-12 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-12 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 2e-12 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-12 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-12 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 3e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-12 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-12 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 5e-12 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 6e-12 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 6e-12 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 7e-12 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 7e-12 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 9e-12 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 1e-11 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-11 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 1e-11 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-11 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-11 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 1e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-11 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-11 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-11 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-11 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-11 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 2e-11 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 2e-11 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 3e-11 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 3e-11 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 4e-11 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 4e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-11 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-11 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 5e-11 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 5e-11 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 5e-11 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 6e-11 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-11 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 7e-11 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 9e-11 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-10 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 1e-10 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-10 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-10 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-10 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-10 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-10 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-10 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 3e-10 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 3e-10 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 3e-10 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 3e-10 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 3e-10 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 4e-10 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 4e-10 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 4e-10 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 5e-10 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-10 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 8e-10 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 9e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-09 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 1e-09 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 1e-09 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-09 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-09 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-09 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-09 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 3e-09 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-09 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 3e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-09 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 4e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 4e-09 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 4e-09 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 4e-09 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 5e-09 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 5e-09 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 5e-09 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 8e-09 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 8e-09 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 8e-09 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 9e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-08 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-08 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-08 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-08 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 2e-08 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-08 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-08 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-08 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-08 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 3e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 4e-08 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 5e-08 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 9e-08 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 9e-08 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 9e-08 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-07 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 1e-07 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-07 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 2e-07 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-07 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 2e-07 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-07 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-07 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 4e-07 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 4e-07 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 5e-07 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 6e-07 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 7e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-06 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 1e-06 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-06 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 4e-06 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-06 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 5e-06 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 5e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-05 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 1e-05 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 1e-05 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 1e-05 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 2e-05 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 3e-05 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-05 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 4e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-05 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 7e-05 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-04 | |
| cd08226 | 328 | cd08226, PK_STRAD_beta, Pseudokinase domain of STE | 1e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 2e-04 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 2e-04 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 4e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.001 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 0.001 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 0.001 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 0.001 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 0.002 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 0.002 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.003 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 0.003 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 522 bits (1347), Expect = e-170
Identities = 352/984 (35%), Positives = 526/984 (53%), Gaps = 64/984 (6%)
Query: 12 PVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNP-PSLQSWTSTSSPCDWPEITC 70
P + +L L + F ++ + EE +LL+ K + +P L +W S++ C W ITC
Sbjct: 10 PYLIFMLFFLFLNFSML----HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITC 65
Query: 71 T-FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFP-EFLYNCTKLQNLDL 128
+ V I L K+I+ KI I L + TI+LS+N + G P + + L+ L+L
Sbjct: 66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNL 125
Query: 129 SQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
S N F G IP I L+ +DL N SG+IP IG S L+ L L N G P
Sbjct: 126 SNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183
Query: 189 IGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEIL 248
+ +L++LE L LA SN IP E G +K LK +++ NL GEIP + L+SL L
Sbjct: 184 LTNLTSLEFLTLA--SNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHL 241
Query: 249 ALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIP 307
L N+L G IPS L L NL LFLY N LSG IP S+ +L KL +DLS N+L+G IP
Sbjct: 242 DLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301
Query: 308 EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGF 367
E +L+NL++L LFSN+ +G++P ++ +P L+ ++++N SG +P +G H+ L
Sbjct: 302 ELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVL 361
Query: 368 EVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 427
++STN +G +PE LC+ G L ++ F N+L G +PKSLG CR+LR V+L N FSGELP
Sbjct: 362 DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELP 421
Query: 428 TGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRGVGSWKNLIV 484
+ + L +S+N + G + S+ W++ L+ ++ N+F G + GS K L
Sbjct: 422 SEFTKLPLVYFLDISNNNLQGRINSRK-WDMPSLQMLSLARNKFFGGLPDSFGS-KRLEN 479
Query: 485 FKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEI 544
S N FSG +P +L SLS L L L NKLSG++P ++ S L +L+L+ N+LSG+I
Sbjct: 480 LDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539
Query: 545 PKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAYDDS 603
P + + V+ LDLS NQ SGEIP +G ++ L N+S N L+G++P LA + S
Sbjct: 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINAS 599
Query: 604 FL-NNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDC 662
+ N +LC + LP C R R + ++ L +++ LV + R+
Sbjct: 600 AVAGNIDLCGGDTTSGLPPC-KRVRKT-PSWWFYITCTLGAFLVLALVAFGFVFIRGRNN 657
Query: 663 LRRKR-NRDPATWKLTSFHQ---LGFTESNILSSLTESNLIGSGGSGQVYR-IDINGAGE 717
L KR + TW+L F T ++ILSSL E N+I G G Y+ I +
Sbjct: 658 LELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQ 717
Query: 718 FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQS 777
FV VK I +N + IA+ +G ++H NIVKL SE L++EY+E ++
Sbjct: 718 FV-VKEI---NDVNS-IPSSEIAD---MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769
Query: 778 LDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 837
L L L W R +IAIG A+ L ++H C+P ++ ++
Sbjct: 770 LSEVLRN----------------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEK 813
Query: 838 ILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897
I++D + + + L +L + SA Y APE T + EK DIY FG+
Sbjct: 814 IIIDGKDEPHLR-LSLPGLLCTDTKCFISSA------YVAPETRETKDITEKSDIYGFGL 866
Query: 898 VLLELVTGK---EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYL--EEMTTVY 952
+L+EL+TGK +A +G H S+ EWA R+ + + +D I + E+ V
Sbjct: 867 ILIELLTGKSPADAEFG-VHGSIVEWA-RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM 924
Query: 953 RLALICTSTLPSSRPSMKEVLQIL 976
LAL CT+T P++RP +VL+ L
Sbjct: 925 NLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 3e-44
Identities = 77/206 (37%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG G VY G+ VA+K I ++ + L +E + EIEIL + H NIVKL+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKII--KKEDSSSLLEELLREIEILKKLNHPNIVKLYG 58
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
EN LV EY E SL L + L L+I + +GL
Sbjct: 59 VFEDENHLYLVMEYCEGGSLKDLLKENEG------------KLSEDEILRILLQILEGLE 106
Query: 819 YMHHDCTPQIIHRDVKSSNILLDS-EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H + IIHRD+K NILLDS K K+ADFGL+K+L + + G+ Y A
Sbjct: 107 YLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMA 161
Query: 878 PE-YAYTTKVNEKIDIYSFGVVLLEL 902
PE +EK DI+S GV+L EL
Sbjct: 162 PEVLLGKGYYSEKSDIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 1e-42
Identities = 84/281 (29%), Positives = 123/281 (43%), Gaps = 38/281 (13%)
Query: 697 NLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK 755
+G G G+VY D G+ VA+K I +K +K + + EI+IL ++H NIV+
Sbjct: 5 EKLGEGSFGKVYLARDKKT-GKLVAIKVI--KKKKIKKDRERILREIKILKKLKHPNIVR 61
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L+ E+ LV EY E L L ++ L S + L QI
Sbjct: 62 LYDVFEDEDKLYLVMEYCEGGDLFDLLK-KRGRL---SEDEARFYLR-----QIL----S 108
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L Y+H I+HRD+K NILLD + K+ADFGLA+ L ++ G+ Y
Sbjct: 109 ALEYLHSK---GIVHRDLKPENILLDEDGHVKLADFGLARQL---DPGEKLTTFVGTPEY 162
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE + +DI+S GV+L EL+TGK GD+ ++ + KP
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLE---LFKKIGKPKPPFPPP 219
Query: 936 DKGIAEPCYLEEMTTVYRLALI--CTSTLPSSRPSMKEVLQ 974
+ I+ LI P R + +E LQ
Sbjct: 220 EWDISPEA----------KDLIRKLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 2e-40
Identities = 76/214 (35%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+GSG G VY+ G+ VAVK + R K ++ EI IL + H NIV+L
Sbjct: 7 LGSGSFGTVYKAKHKGT-GKIVAVKIL-KKRSEKSKKDQTARREIRILRRLSHPNIVRLI 64
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
++ LV EY E L +L L +IA+ +GL
Sbjct: 65 DAFEDKDHLYLVMEYCEGGDLFDYLSRGGP-------------LSEDEAKKIALQILRGL 111
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H + IIHRD+K NILLD KIADFGLAK L K ++ G+ Y A
Sbjct: 112 EYLHSN---GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSS--LTTFVGTPWYMA 166
Query: 878 PE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE Y KV D++S GV+L EL+TGK
Sbjct: 167 PEVLLGGNGYGPKV----DVWSLGVILYELLTGK 196
|
Length = 260 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 7e-40
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 51/296 (17%)
Query: 693 LTESNLIGSGGSGQVYR---IDINGA-GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
LT +G G G+VY+ G VAVK + + Q +EF+ E I+ +
Sbjct: 1 LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQI--EEFLREARIMRKL 58
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H N+VKL + E +V EYME L +L RK ++ L L
Sbjct: 59 DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RK----------NRPKLSLSDLLS 106
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG---EPHT 865
A+ A+G+ Y+ IHRD+ + N L+ KI+DFGL++ L +
Sbjct: 107 FALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGG 163
Query: 866 MSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 920
+ + APE +T+K D++SFGV+L E+ T G++ G + + E+
Sbjct: 164 KLPIR----WMAPESLKEGKFTSKS----DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEY 215
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
Y +P C E +Y L L C + P RP+ E+++IL
Sbjct: 216 LKNGYRLPQP----------PNCPPE----LYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 7e-39
Identities = 82/295 (27%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 693 LTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
LT +G G G+VY+ +G VAVK + + Q +EF+ E I+ +
Sbjct: 1 LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQI--EEFLREARIMRKL 58
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H NIVKL + E ++V EYM L +L + L L
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP-----------KELSLSDLLS 107
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
A+ A+G+ Y+ IHRD+ + N L+ KI+DFGL++ L
Sbjct: 108 FALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD---DYYKV 161
Query: 869 VAGSFGYF--APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 921
G APE +T+K D++SFGV+L E+ T G+E G + + E+
Sbjct: 162 KGGKLPIRWMAPESLKEGKFTSKS----DVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYL 217
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ Y KP C E +Y+L L C + P RP+ E+++IL
Sbjct: 218 KKGYRLPKP----------PNCPPE----LYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 3e-37
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 25/284 (8%)
Query: 697 NLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+VY+ +G VAVK + + ++ K+F+ E ++ + H N+
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER--KDFLKEARVMKKLGHPNV 58
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
V+L + E LV EYME L +L + S S L L AI
Sbjct: 59 VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKS----TLSLKDLLSFAIQI 114
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A+G+ Y+ + +HRD+ + N L+ + KI+DFGL++ + +
Sbjct: 115 AKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPI 171
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933
+ APE K D++SFGV+L E+ T Y S E + +
Sbjct: 172 RWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG--LSNEE-----------VLE 218
Query: 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
L KG P +Y L L C P RP+ E+++ L
Sbjct: 219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 1e-36
Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-AEIEILGTIRHANIVKLW 757
IG GG G+VY+ G+ VA+K I KL K +KE I EI+IL +H NIVK +
Sbjct: 8 IGKGGFGEVYKARHKRTGKEVAIKVI----KLESKEKKEKIINEIQILKKCKHPNIVKYY 63
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA---IGAA 814
++ +V E+ SL L ++L T QIA
Sbjct: 64 GSYLKKDELWIVMEFCSGGSLKDLLKSTNQTL---------------TESQIAYVCKELL 108
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + IIHRD+K++NILL S+ + K+ DFGL+ L+ +TM G+
Sbjct: 109 KGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTM---VGTPY 162
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ APE + K DI+S G+ +EL GK
Sbjct: 163 WMAPEVINGKPYDYKADIWSLGITAIELAEGK 194
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 1e-36
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE---FIAEIEILGTI 748
T L+G G G VY GE +AVK + +L+ E+E EI IL ++
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSV----ELSGDSEEELEALEREIRILSSL 56
Query: 749 RHANIVK-LWCCISSENSKLLVY-EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+H NIV+ E + L ++ EY+ SL SL+ + + V+ TR
Sbjct: 57 QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSL--------SSLLKKFGKLPEPVIRKYTR 108
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
QI +GL Y+H + I+HRD+K +NIL+DS+ K+ADFG AK L
Sbjct: 109 -QIL----EGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+V G+ + APE + DI+S G ++E+ TGK
Sbjct: 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 1e-35
Identities = 74/296 (25%), Positives = 120/296 (40%), Gaps = 50/296 (16%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
L +G G G+VY+ + G GE VAVK + +++ +EF+ E I+ +
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKL 58
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H NIV+L + +V EYM L +L L LQ
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK------------LTLKDLLQ 106
Query: 809 IAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+A+ A+G+ Y+ + +HRD+ + N L+ KI+DFGL++ + +
Sbjct: 107 MALQIAKGMEYLESKNF----VHRDLAARNCLVTENLVVKISDFGLSRDIYEDDY----- 157
Query: 868 AVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922
G APE K K D++SFGV+L E+ T G++
Sbjct: 158 YRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFT-----LGEQ--------- 203
Query: 923 RHYAEEKP--ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
Y + + L+ G P +Y L L C + P RP+ E+++ L
Sbjct: 204 -PYPGMSNEEVLELLEDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 5e-35
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 57/293 (19%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G+VY + G+ +K I + +++K ++ + E++IL + H NI+K
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEI-DLSNMSEKEREDALNEVKILKKLNHPNIIKY 64
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + +V EY + L + + +K+ Q +L W Q+ +
Sbjct: 65 YESFEEKGKLCIVMEYADGGDLSQKIKKQKKE--GKPFPEEQ-ILDWFV--QLCLA---- 115
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA---VAGSF 873
L Y+H +I+HRD+K NI L S K+ DFG++K+L+ T+ V G+
Sbjct: 116 LKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLS-----STVDLAKTVVGTP 167
Query: 874 GYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR----HY 925
Y +PE Y N K DI+S G VL EL T K G+ +L E A + Y
Sbjct: 168 YYLSPELCQNKPY----NYKSDIWSLGCVLYELCTLKHPFEGE---NLLELALKILKGQY 220
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL---PSSRPSMKEVLQI 975
PI Y E+ + +S L P RPS+ ++LQ
Sbjct: 221 ---PPI---------PSQYSSELRN------LVSSLLQKDPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 27/215 (12%)
Query: 696 SNLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+LIG G G VY+ +++ G+FVA+K+I + + L K + EI++L ++H NIV
Sbjct: 5 GDLIGRGAFGVVYKGLNLE-TGDFVAIKQISLEKIKEEAL-KSIMQEIDLLKNLKHPNIV 62
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWL--HGR-KRSLVSGSSSVHQHVLHWPTRLQIAI 811
K I + +S ++ EY EN SL + + G SLV+ V+Q VL
Sbjct: 63 KYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVA--VYVYQ-VL---------- 109
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
QGL Y+H +IHRD+K++NIL + K+ADFG+A L + +V G
Sbjct: 110 ---QGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA--SVVG 161
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + APE + + DI+S G ++EL+TG
Sbjct: 162 TPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 87/295 (29%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 693 LTESNLIGSGGSGQVY--RIDI--NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
L +G G G+V R D + GE VAVK + N ++ +F EIEIL T+
Sbjct: 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIEILRTL 63
Query: 749 RHANIVKL--WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H NIVK C S L+ EY+ + SL +L H+ ++
Sbjct: 64 DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQR------------HRDQINLKRL 111
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
L + +G+ Y+ + + IHRD+ + NIL++SE KI+DFGLAK+L + + + +
Sbjct: 112 LLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYV 168
Query: 867 SAVAGS--FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
S F Y APE T+K + D++SFGV L EL T + + L
Sbjct: 169 KEPGESPIFWY-APECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ 227
Query: 925 YAEE-KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + L +G P VY L +C P RPS +++ I+ R
Sbjct: 228 GQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 37/219 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-------FIAEIEILGTIRHA 751
IG G GQVY+ GE VA+K+I ++E E I EI++L +RH
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKI--------RMENEKEGFPITAIREIKLLQKLRHP 58
Query: 752 NIVKLWCCISSE--NSKLLVYEYMENQSLD-RWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
NIV+L ++S+ S +V+EYM++ D L + + + Q
Sbjct: 59 NIVRLKEIVTSKGKGSIYMVFEYMDH---DLTGLLDSPEVKFT-----ESQIKCY--MKQ 108
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
+ +GL Y+H + I+HRD+K SNIL++++ K+ADFGLA+ K+ +
Sbjct: 109 L----LEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNR 161
Query: 869 VAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
V + Y PE T+ ++D++S G +L EL GK
Sbjct: 162 VI-TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 1e-27
Identities = 87/302 (28%), Positives = 132/302 (43%), Gaps = 65/302 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G SG+VY+ G+ VA+K++ +L ++ ++ I EI I+ +H NIV +
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKM----RLRKQNKELIINEILIMKDCKHPNIVDYYD 82
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS-SSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V EYM+ SL + + + V + VL QGL
Sbjct: 83 SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVL-------------QGL 129
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHTMSAV 869
Y+H + +IHRD+KS NILL + K+ADFG A L K+ G P+ M
Sbjct: 130 EYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWM--- 183
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
APE K+DI+S G++ +E+ G+ Y E
Sbjct: 184 -------APEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP----------------YLREP 220
Query: 930 PITDAL----DKGIAEPCYLEEMTTVYR--LALICTSTLPSSRPSMKEVLQ--ILRRCCP 981
P+ AL KGI E+ + ++ L C P RPS +E+LQ L++ CP
Sbjct: 221 PLR-ALFLITTKGIPPLKNPEKWSPEFKDFLNK-CLVKDPEKRPSAEELLQHPFLKKACP 278
Query: 982 TE 983
E
Sbjct: 279 KE 280
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 113 bits (282), Expect = 1e-26
Identities = 83/287 (28%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVK 755
+G G G+VY D + VA+K + + K + F+ EI+IL ++ H NIVK
Sbjct: 7 KLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVK 62
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L+ E S LV EY++ SL+ L R S L I
Sbjct: 63 LYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEA----------LFILAQILS 112
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLA----KQGEPHTMSAVA 870
L Y+H + IIHRD+K NILLD + K+ DFGLAK+L P S
Sbjct: 113 ALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSV 169
Query: 871 GSFGYFAPEYA---YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
G+ GY APE + DI+S G+ L EL+TG G++++S + E
Sbjct: 170 GTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE 229
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
T +L ++ L + P +R S L
Sbjct: 230 LP--TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 109 bits (276), Expect = 1e-26
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G SG VY++ G+ A+K+I + +++ K+ + E++ L + +VK +
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKI--HVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL--QIAIGAAQG 816
E +V EYM+ SL + + V P + IA +G
Sbjct: 67 AFYKEGEISIVLEYMDGGSLA---------------DLLKKVGKIPEPVLAYIARQILKG 111
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H IIHRD+K SN+L++S+ + KIADFG++K+L + + V G+ Y
Sbjct: 112 LDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC-NTFV-GTVTYM 167
Query: 877 APE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+PE Y+Y DI+S G+ LLE GK
Sbjct: 168 SPERIQGESYSYAA------DIWSLGLTLLECALGK 197
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 50/291 (17%)
Query: 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA 751
L IG G G V D G+ VAVK + K + + F+AE ++ T+RH
Sbjct: 7 ELKLGATIGKGEFGDVMLGDY--RGQKVAVKCL----KDDSTAAQAFLAEASVMTTLRHP 60
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
N+V+L + N +V EYM SL +L R R++++ + +L A+
Sbjct: 61 NLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLA-----------QQLGFAL 109
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+G+ Y+ +HRD+ + N+L+ + AK++DFGLAK ++ + +G
Sbjct: 110 DVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-------SG 159
Query: 872 SF--GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ APE K + K D++SFG++L E+ + Y L +
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKD---------- 207
Query: 930 PITDALDKGI----AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ ++KG E C E VY++ C P+ RP+ K++ + L
Sbjct: 208 -VVPHVEKGYRMEAPEGCPPE----VYKVMKDCWELDPAKRPTFKQLREQL 253
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-25
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 699 IGSGGSGQV--YRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+G G G+V Y D G GE VAVK + R+ Q+ + EI IL T+ H NIV
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTL--KRECGQQNTSGWKKEINILKTLYHENIV 69
Query: 755 KLWCCISSENSK--LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
K C S + K L+ EY+ SL +L K +L Q+ +
Sbjct: 70 KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLA-----------------QLLLF 112
Query: 813 AAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A Q G+ Y+H + IHRD+ + N+LLD++ KI DFGLAK + + E + +
Sbjct: 113 AQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 169
Query: 870 AGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW--AWRHYA 926
S ++A E K + D++SFGV L EL+T ++ E +
Sbjct: 170 GDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDS-KQSPPKKFEEMIGPKQGQM 228
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980
+ + L++G+ PC VY L C T RP+ + ++ IL+
Sbjct: 229 TVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G SG V ++ G+ +AVK I ++N+ ++K+ + E++IL IV +
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCNSPYIVGFYG 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ + EYM+ SLD+ L V G + + +L +IA+ +GL
Sbjct: 67 AFYNNGDISICMEYMDGGSLDKIL-----KEVQGR--IPERILG-----KIAVAVLKGLT 114
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML----AKQGEPHTMSAVAGSFG 874
Y+H +IIHRDVK SNIL++S + K+ DFG++ L AK G+
Sbjct: 115 YLHEKH--KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--------TFVGTSS 164
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE + K DI+S G+ L+EL TG+
Sbjct: 165 YMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 5e-25
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 699 IGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+V+ ++ E VAVK + + K+F E E+L +H NI
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTL--KETASNDARKDFEREAELLTNFQHENI 70
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
VK + + + ++V+EYME+ L+++L HG + + S L LQIA+
Sbjct: 71 VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE-LTLSQLLQIAV 129
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG----EPHTMS 867
A G+ Y+ + +HRD+ + N L+ + KI DFG+++ + HTM
Sbjct: 130 QIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTML 186
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926
+ + PE K + D++SFGVVL E+ T GK+ YG + + E
Sbjct: 187 PIR----WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC------ 236
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
IT C + VY + L C P R ++K++ + L+
Sbjct: 237 ----ITQGRLLQRPRTC----PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-25
Identities = 79/292 (27%), Positives = 142/292 (48%), Gaps = 34/292 (11%)
Query: 691 SSLTESNLIGSGGSGQVYR--IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
S +T+ +IG+G G+V+R + + G E VA+K + +K ++F++E I+G
Sbjct: 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTL--KPGYTEKQRQDFLSEASIMGQ 62
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NI++L ++ +++ EYMEN +LD++L G S +Q V
Sbjct: 63 FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDH-----DGEFSSYQLV------- 110
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE-PHTM 866
+ G A G+ Y+ +HRD+ + NIL++S + K++DFGL+++L E +T
Sbjct: 111 GMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTT 167
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926
S + APE K D++SFG+V+ E+++ E Y W
Sbjct: 168 SGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY-----------WDMSN 216
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
E + A++ G P ++ + VY+L L C + RP +++ +L +
Sbjct: 217 HE--VMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 36/217 (16%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLE---KEFIAEIEILGTIRHANIV 754
+G G G VY+ D GE VA+K+I +L+ + E + EI +L ++H NIV
Sbjct: 7 LGEGTYGVVYKARDKKT-GEIVALKKI----RLDNEEEGIPSTALREISLLKELKHPNIV 61
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
KL I +E LV+EY + L ++L R L S ++ + ++ Q+
Sbjct: 62 KLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPL---SPNLIKSIM-----YQLL---- 108
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y H +I+HRD+K NIL++ + K+ADFGLA+ A T + +
Sbjct: 109 RGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR--AFGIPLRTYTHEVVTLW 163
Query: 875 YFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE Y+T V DI+S G + E++TGK
Sbjct: 164 YRAPEILLGSKHYSTAV----DIWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 83/288 (28%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 696 SNLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
N IG G G+VY ++++ GE +AVK I + + K KE E+++L ++H N+V
Sbjct: 5 GNKIGGGTFGKVYTAVNLD-TGELMAVKEI-RIQDNDPKTIKEIADEMKVLELLKHPNLV 62
Query: 755 KLWCCISSENSKLLVY-EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
K + + K+ ++ EY +L+ L R L +HV+ T LQ+ G
Sbjct: 63 KYYG-VEVHREKVYIFMEYCSGGTLEELLEH-GRIL-------DEHVIRVYT-LQLLEG- 111
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG--EPHTMSAVAG 871
L Y+H + I+HRD+K +NI LD K+ DFG A L + ++AG
Sbjct: 112 ---LAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAG 165
Query: 872 SFGYFAPEYAYTTKVNEK---IDIYSFGVVLLELVTGKEANYGDEHTSLAEWA--WRHYA 926
+ Y APE K DI+S G V+LE+ TGK ++ E+ + A
Sbjct: 166 TPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----EFQIMFHVGA 221
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
KP P L+ C + P RP+ E+LQ
Sbjct: 222 GHKPPI---------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G VY+ GE VA+K+I R ++ + K + EI++L + H NI+KL
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKI-KLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ LV+E+M+ L + + R+R L + + Q+ QGL
Sbjct: 66 VFRHKGDLYLVFEFMD-TDLYKLIKDRQRGLP------ESLIKSY--LYQLL----QGLA 112
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
+ H I+HRD+K N+L+++E K+ADFGLA+ P+T V + Y AP
Sbjct: 113 FCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYT-HYVVTRW-YRAP 167
Query: 879 EYAYTTKV-NEKIDIYSFGVVLLELVTGK 906
E K + +DI+S G + EL++ +
Sbjct: 168 ELLLGDKGYSTPVDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 3e-24
Identities = 88/290 (30%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 698 LIGSG--GSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G GS ++ R D GE VAVK++ ++ + + +F EIEIL +++H NI
Sbjct: 11 QLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLR---DFEREIEILKSLQHDNI 67
Query: 754 VKL-WCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
VK C S+ L LV EY+ SL +L H+ L L A
Sbjct: 68 VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL------------QKHRERLDHRKLLLYAS 115
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+G+ Y+ + + +HRD+ + NIL++SE + KI DFGL K+L + E + +
Sbjct: 116 QICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGE 172
Query: 872 S--FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
S F Y APE +K + D++SFGVVL EL T Y D+ S R +K
Sbjct: 173 SPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-----YSDKSCSPPAEFMRMMGNDK 226
Query: 930 P-------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
+ + L P +Y + C + PS RPS E+
Sbjct: 227 QGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 6e-24
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G + VY E VA+KRI + K ++ E E++ + H N+VK +
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRI-DLEKCQTSVD-ELRKEVQAMSQCNHPNVVKYYT 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ LV Y+ SL L K S G L + +GL
Sbjct: 67 SFVVGDELWLVMPYLSGGSL---LDIMKSSYPRG-------GLDEAIIATVLKEVLKGLE 116
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE--PHTMSAVAGSFGYF 876
Y+H + IHRD+K+ NILL + KIADFG++ LA G+ G+ +
Sbjct: 117 YLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM 173
Query: 877 APE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE + Y + K DI+SFG+ +EL TG
Sbjct: 174 APEVMEQVHGY----DFKADIWSFGITAIELATGA 204
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 9e-24
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G G VY+ G+ VA+K + L Q++ KE I IL IVK +
Sbjct: 10 KLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDL-QEIIKE----ISILKQCDSPYIVKYY 64
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAA 814
+V EY S+ + ++L T +IA
Sbjct: 65 GSYFKNTDLWIVMEYCGAGSVSDIMKITNKTL---------------TEEEIAAILYQTL 109
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + + IHRD+K+ NILL+ E +AK+ADFG++ L + V G+
Sbjct: 110 KGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQL--TDTMAKRNTVIGTPF 164
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ APE N K DI+S G+ +E+ GK
Sbjct: 165 WMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
S +T +IG G G+V R + G+ VA+K + Q+L+ F+ E I+G
Sbjct: 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD--FLTEASIMGQ 61
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NI++L ++ +++ EYMEN SLD++L R+ + +
Sbjct: 62 FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL--RE----------NDGKFTVGQLV 109
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+ G A G+ Y+ +HRD+ + NIL++S K++DFGL++ L +T
Sbjct: 110 GMLRGIASGMKYLSEMNY---VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK 166
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ APE K D++SFG+V+ E+++ E Y W
Sbjct: 167 GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPY---------WDM----S 213
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + A++ G P ++ + +Y+L L C + RP+ +++ L +
Sbjct: 214 NQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
N IG G G V+++ A+K+I + K+N++ +E I E +L + + I++
Sbjct: 6 NKIGKGSFGVVFKVVRKADKRVYAMKQI-DLSKMNRREREEAIDEARVLAKLDSSYIIRY 64
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHG-RKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+ + +V EY EN L + L R R L W +QI +G
Sbjct: 65 YESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPED--------QVWRFFIQILLG--- 113
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA--VAGSF 873
L ++H + +I+HRD+KS N+ LD+ KI D G+AK+L+ +T A + G+
Sbjct: 114 -LAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS----DNTNFANTIVGTP 165
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y +PE NEK D+++ GVVL E TGK
Sbjct: 166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 3e-23
Identities = 80/280 (28%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKR--IWNNRKLNQKLEKEFIAEIEILGTIRHANIVK 755
L+GSG G VY G+F AVK + ++ + Q+ K+ EI +L ++H NIV+
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
E++ + E + SL L+ S + V+ TR QI +G
Sbjct: 67 YLGTEREEDNLYIFLELVPGGSLA--------KLLKKYGSFPEPVIRLYTR-QILLG--- 114
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L Y+H +HRD+K +NIL+D+ K+ADFG+AK + + + GS +
Sbjct: 115 -LEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYW 167
Query: 876 FAPEY-AYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
APE A DI+S G +LE+ TGK + A + E PI D
Sbjct: 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP-WSQLEGVAAVFKIGRSKELPPIPDH 226
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
L + L C PS RP+ E+L+
Sbjct: 227 LSDEAKD------------FILKCLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 1e-22
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G V++ GE VA+K++ R+L + + + EI+ L +H +VKL
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKV-ALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ--- 815
+ +LV EYM S S V + Q+
Sbjct: 67 VFPHGSGFVLVMEYM----------------PSDLSEVLRDEERPLPEAQVKSYMRMLLK 110
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
G+ YMH + I+HRD+K +N+L+ ++ KIADFGLA++ +++ VA + Y
Sbjct: 111 GVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVA-TRWY 166
Query: 876 FAPEYAY-TTKVNEKIDIYSFGVVLLELVTG 905
APE Y K + +D+++ G + EL+ G
Sbjct: 167 RAPELLYGARKYDPGVDLWAVGCIFAELLNG 197
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-22
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 37/226 (16%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
LS L N IGSG G VY++ G A+K I+ N + ++ EIEIL +
Sbjct: 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN 130
Query: 750 HANIVKLWCC--ISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H N+VK C + N ++ ++ E+M+ SL+ G H+
Sbjct: 131 HPNVVK---CHDMFDHNGEIQVLLEFMDGGSLE----GT-------------HIADEQFL 170
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
+A G+ Y+H I+HRD+K SN+L++S KIADFG++++LA+ +P
Sbjct: 171 ADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNS 227
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKI------DIYSFGVVLLELVTGK 906
S G+ Y +PE T +N DI+S GV +LE G+
Sbjct: 228 S--VGTIAYMSPE-RINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270
|
Length = 353 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 2e-22
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 36/224 (16%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
+ E + +G G G V + + G A+K I N L+K+ + E+EI + +
Sbjct: 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTI--TTDPNPDLQKQILRELEINKSCKSPY 60
Query: 753 IVKLW--CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
IVK + S +S + EY E SLD ++ + + + + VL +IA
Sbjct: 61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDS-IYKKVKKR---GGRIGEKVL-----GKIA 111
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+GL Y+H + +IIHRD+K SNILL + + K+ DFG++ GE ++++A
Sbjct: 112 ESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS------GE--LVNSLA 160
Query: 871 GSFG----YFAPEY----AYTTKVNEKIDIYSFGVVLLELVTGK 906
G+F Y APE Y+ D++S G+ LLE+ +
Sbjct: 161 GTFTGTSFYMAPERIQGKPYSITS----DVWSLGLTLLEVAQNR 200
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 5e-22
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 35/273 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+GSG G+V+ VA+K + ++ L Q+ +F E++ L +RH +++ L+
Sbjct: 14 LGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQ---DFQKEVQALKRLRHKHLISLFA 69
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
S ++ E ME SL +L S VL + + +A A+G+
Sbjct: 70 VCSVGEPVYIITELMEKGSLLAFL-----------RSPEGQVLPVASLIDMACQVAEGMA 118
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFA 877
Y+ IHRD+ + NIL+ + K+ADFGLA+++ E + S + + A
Sbjct: 119 YLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK---EDVYLSSDKKIPYKWTA 172
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDK 937
PE A + K D++SFG++L E+ T + Y + E + D +
Sbjct: 173 PEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY--PGMNNHE-----------VYDQITA 219
Query: 938 GIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970
G PC + +Y++ L C + P RPS K
Sbjct: 220 GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFK 252
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.0 bits (240), Expect = 6e-22
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF-IAEIEILGTIRHANIVKLW 757
+G G G+V + G+ A+K + +K+ ++ E E + E IL I H IVKL
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVL-KKKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQG 816
+E LV EY L + H K S + R A I
Sbjct: 60 YAFQTEEKLYLVLEYAPGGEL--FSHLSKEGRFS------EER----ARFYAAEI--VLA 105
Query: 817 LCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L Y+H II+RD+K NILLD++ K+ DFGLAK L+ E + G+ Y
Sbjct: 106 LEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAKELSS--EGSRTNTFCGTPEY 159
Query: 876 FAPEY----AYTTKVNEKIDIYSFGVVLLELVTGK 906
APE Y V D +S GV+L E++TGK
Sbjct: 160 LAPEVLLGKGYGKAV----DWWSLGVLLYEMLTGK 190
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 1e-21
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 34/276 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G+V+ N VAVK + K K+F+AE +I+ +RH +++L+
Sbjct: 14 LGAGQFGEVWEGLWNNTTP-VAVKTL----KPGTMDPKDFLAEAQIMKKLRHPKLIQLYA 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ E +V E M+ SL +L G L P + +A A G+
Sbjct: 69 VCTLEEPIYIVTELMKYGSLLEYLQGGAGR-----------ALKLPQLIDMAAQVASGMA 117
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+ IHRD+ + N+L+ K+ADFGLA+++ K+ + AP
Sbjct: 118 YLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVI-KEDIYEAREGAKFPIKWTAP 173
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938
E A + + K D++SFG++L E+VT YG + AE + +D+G
Sbjct: 174 EAALYNRFSIKSDVWSFGILLTEIVT-----YGR-----MPYPGMTNAE---VLQQVDQG 220
Query: 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
PC +Y + L C P RP+ E LQ
Sbjct: 221 YRMPCPPGCPKELYDIMLDCWKEDPDDRPTF-ETLQ 255
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 2e-21
Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 41/231 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ-KLEKEFIAEIEILG-TIRHANIVK 755
+IG G V + A+K + + R+L + K K E E+L H I+K
Sbjct: 8 IIGEGSFSTVVLAKEKETNKEYAIKIL-DKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIK 66
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH--QHVLHWPTRLQIAIGA 813
L+ E + V EY N L + RK GS + +I +
Sbjct: 67 LYYTFQDEENLYFVLEYAPNGEL--LQYIRKY----GSLDEKCTRFYAA-----EILLA- 114
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML--------------AK 859
L Y+H + IIHRD+K NILLD + KI DFG AK+L
Sbjct: 115 ---LEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNI 168
Query: 860 QGEPHTMSAVAGSF-G---YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ SF G Y +PE + D+++ G ++ +++TGK
Sbjct: 169 DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 7e-21
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 39/225 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE---KEFIAEIEILGTIRHANIVK 755
IG G G VY+ GE VA+K+I +L+ + E I EI +L + H NIVK
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKI----RLDTETEGVPSTAIREISLLKELNHPNIVK 63
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIG 812
L I +EN LV+E++ +Q L +++ S + S + Q +
Sbjct: 64 LLDVIHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLL------------ 110
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
QGL + H + +++HRD+K N+L+++E K+ADFGLA+ +T V +
Sbjct: 111 --QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--T 163
Query: 873 FGYFAPEYA-----YTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
Y APE Y+T V DI+S G + E+VT + GD
Sbjct: 164 LWYRAPEILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 7e-21
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 52/310 (16%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEF-----VAVKRIWNNRKLNQKLEKEFIAEIE 743
LS++ +G G G+VY+ ++ G E VA+K + N K+++EF E E
Sbjct: 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAE 60
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH---QHV 800
++ ++H NIV L + E +++EY+ + L +L G+ S +
Sbjct: 61 LMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSS 120
Query: 801 LHWPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA---- 854
L L IAI A G+ Y+ HH +HRD+ + N L+ KI+DFGL+
Sbjct: 121 LDCSDFLHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKISDFGLSRDIY 175
Query: 855 -----KMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKE 907
++ +K P M A +G F E DI+SFGVVL E+ + G +
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTES----------DIWSFGVVLWEIFSYGLQ 225
Query: 908 ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP 967
YG ++ ++ I + + PC + VY L + C + +P+ RP
Sbjct: 226 PYYG-------------FSNQEVI-EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRP 271
Query: 968 SMKEVLQILR 977
K++ LR
Sbjct: 272 RFKDIHTRLR 281
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 93.0 bits (231), Expect = 7e-21
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+ +T + +G G G+VY VAVK + ++ ++E EF+ E ++ I+H
Sbjct: 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVE-EFLKEAAVMKEIKH 61
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N+V+L + E ++ E+M +L +L R V+ L +A
Sbjct: 62 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV-----------VLLYMA 110
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ IHRD+ + N L+ K+ADFGL++++ G+ +T A A
Sbjct: 111 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGA 165
Query: 871 G-SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEWAWRHYAEE 928
+ APE K + K D+++FGV+L E+ T + Y G + + + E + Y E
Sbjct: 166 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRME 225
Query: 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+P E C VY L C PS RPS E+ Q
Sbjct: 226 RP----------EGC----PPKVYELMRACWQWNPSDRPSFAEIHQAF 259
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 9e-21
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 699 IGSGGSGQV----YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+G G G V Y + +G VAVK + K KEF+ E ++ + H IV
Sbjct: 3 LGHGNFGSVVKGVYLMK-SGKEVEVAVKTLKQEHIAAGK--KEFLREASVMAQLDHPCIV 59
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L + +LV E L ++L +KR + S + Q+A+G
Sbjct: 60 RL-IGVCKGEPLMLVMELAPLGPLLKYL--KKRREIPVSD-----LKELA--HQVAMG-- 107
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF- 873
M + + +HRD+ + N+LL + +AKI+DFG+++ L G + + AG +
Sbjct: 108 -----MAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRAL-GAGSDYYRATTAGRWP 161
Query: 874 -GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK--P 930
++APE K + K D++S+GV L E + YG + Y E K
Sbjct: 162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFS-----YGA----------KPYGEMKGAE 206
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ L+ G P E +Y + L C P RP+ E+ RR
Sbjct: 207 VIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 1e-20
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 41/279 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+V+ NG VA+K + K + F+ E +++ +RH +V+L+
Sbjct: 14 LGQGCFGEVWMGTWNGTTR-VAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+S E +V EYM SL +L G L P + +A A G+
Sbjct: 69 VVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-----------LRLPQLVDMAAQIASGMA 116
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS---FGY 875
Y+ +HRD++++NIL+ K+ADFGLA+++ E + +A G+ +
Sbjct: 117 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKW 169
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE A + K D++SFG++L EL T Y + + D +
Sbjct: 170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-------------MVNREVLDQV 216
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
++G PC E +++ L C P RP+ E LQ
Sbjct: 217 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-EYLQ 254
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 1e-20
Identities = 70/229 (30%), Positives = 93/229 (40%), Gaps = 67/229 (29%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIV--- 754
IGSG G VY+ GE VA+K I KL + E I EI +L RH NIV
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVI----KLEPGDDFEIIQQEISMLKECRHPNIVAYF 66
Query: 755 -------KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
KLW + EY SL + L + L
Sbjct: 67 GSYLRRDKLWIVM----------EYCGGGSLQDIYQVTRGPL---------------SEL 101
Query: 808 QIAI---GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA----KMLAKQ 860
QIA +GL Y+H IHRD+K +NILL + K+ADFG++ +AK+
Sbjct: 102 QIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR 158
Query: 861 ----GEPHTMSAVAGSFGYFAPEYA---YTTKVNEKIDIYSFGVVLLEL 902
G P+ M APE A + K DI++ G+ +EL
Sbjct: 159 KSFIGTPYWM----------APEVAAVERKGGYDGKCDIWALGITAIEL 197
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 91.6 bits (227), Expect = 2e-20
Identities = 77/289 (26%), Positives = 125/289 (43%), Gaps = 40/289 (13%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
L LT +IG G G V GE+ K N K + + F+ E ++ +
Sbjct: 5 LQKLTLGEIIGEGEFGAVL------QGEYTGQKVAVKNIKCDVTAQA-FLEETAVMTKLH 57
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H N+V+L I N +V E M +L +L R R+LVS LQ
Sbjct: 58 HKNLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRGRALVS-----------VIQLLQF 105
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
++ A+G+ Y+ + +++HRD+ + NIL+ + AK++DFGLA++ +
Sbjct: 106 SLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARV-----GSMGVDNS 157
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ APE K + K D++S+GV+L E+ + A Y SL E
Sbjct: 158 KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY--PKMSLKE---------- 205
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + ++KG VY L C T P RPS ++ + L +
Sbjct: 206 -VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 2e-20
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 33/277 (11%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G G V+ + V +K+I ++ + E ++L + H NI++ +
Sbjct: 7 VVGRGAFGIVHLCRRKADQKLVIIKQI-PVEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ + ++V EY +L ++ R SL+ +LH+ ++ +A
Sbjct: 66 ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLD-----EDTILHFFVQILLA------- 113
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+HH T I+HRD+K+ NILLD + KI DFG++K+L+ + + +T V G+ Y
Sbjct: 114 --LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT---VVGTPCYI 168
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+PE N+K DI++ G VL EL + K A +L PI+D
Sbjct: 169 SPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS--GTFAPISDR-- 224
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
Y + + +L L + PS RP + +++
Sbjct: 225 -------YSPD---LRQLILSMLNLDPSKRPQLSQIM 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 91.9 bits (228), Expect = 2e-20
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 34/290 (11%)
Query: 691 SSLTESNLIGSGGSGQVY--RIDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
S + +IG+G G+V R+ + G E VA+K + +K ++F++E I+G
Sbjct: 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTL--KAGYTEKQRRDFLSEASIMGQ 61
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NI+ L ++ ++V EYMEN SLD +L RK G +V Q V
Sbjct: 62 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL--RKH---DGQFTVIQLV------- 109
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTM 866
+ G A G+ Y+ +HRD+ + NIL++S K++DFGL+++L E +T
Sbjct: 110 GMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT 166
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926
+ APE K D++S+G+V+ E+++ E Y +
Sbjct: 167 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE-------------M 213
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + A+++G P ++ +++L L C + RP ++++ IL
Sbjct: 214 SNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 4e-20
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 50/290 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G V ++ G+ + K I + + +K +++ ++E+ IL ++H NIV+ +
Sbjct: 8 IGKGSFGTVRKVRRKSDGKILVWKEI-DYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH---WPTRLQIAIGAAQ 815
I +++ L Y ME G L+ +++ W Q+ + A
Sbjct: 67 RIIDRSNQTL-YIVMEYCE-----GGDLAQLIQKCKKERKYIEEEFIWRILTQLLL--AL 118
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHTMS 867
C+ D ++HRD+K +NI LD+ K+ DFGLAK+L G P+ MS
Sbjct: 119 YECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMS 178
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
PE +EK DI+S G ++ EL LA +
Sbjct: 179 ----------PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI--KEGK 226
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL---PSSRPSMKEVLQ 974
+ I Y E L + S L P RPS +E+LQ
Sbjct: 227 FRRIPYR---------YSSE------LNEVIKSMLNVDPDKRPSTEELLQ 261
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 4e-20
Identities = 72/219 (32%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-----EIEILGTIRHA 751
N IG G G VYR +GE VA+K++ + E++ I EI +L +RH
Sbjct: 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDN------ERDGIPISSLREITLLLNLRHP 66
Query: 752 NIVKLWCCI--SSENSKLLVYEYMENQSLDRWLHGRKRSLV-SGSSSVHQHVLHWPTRLQ 808
NIV+L + +S LV EY E Q L L S + +L
Sbjct: 67 NIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLR------ 119
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
GL Y+H + IIHRD+K SN+LL + KIADFGLA+ +P T
Sbjct: 120 -------GLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKV 169
Query: 869 VAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
V + Y APE T ID+++ G +L EL+ K
Sbjct: 170 V--TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 5e-20
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA---EIEILGTIRHANIV 754
L+G G G+VY G +AVK++ + + + +KE A EI++L ++H IV
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAVKQVPFDP-DSPETKKEVNALECEIQLLKNLQHERIV 67
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + C+ + + + EYM S+ L +G V+ TR QI
Sbjct: 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKY----------TR-QIL-- 114
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAG 871
+G+ Y+H + I+HRD+K +NIL DS K+ DFG +K L T M +V G
Sbjct: 115 --EGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTG 169
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + +PE K D++S G ++E++T K
Sbjct: 170 TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 5e-20
Identities = 78/226 (34%), Positives = 112/226 (49%), Gaps = 48/226 (21%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWN---NRKLNQKLEKEFIAEIEILGTIR-HANI 753
+G G G V++ ID E VA+K+I++ N Q+ +E I L + H NI
Sbjct: 15 LGKGAYGIVWKAIDRR-TKEVVALKKIFDAFRNATDAQRTFRE----IMFLQELGDHPNI 69
Query: 754 VKLWCCISSENSK--LLVYEYMENQSLDRWLHG--RKRSLVSGSSSVHQHVLHWPTRLQI 809
VKL I +EN K LV+EYME LH R L VH+ + + Q+
Sbjct: 70 VKLLNVIKAENDKDIYLVFEYMETD-----LHAVIRANIL----EDVHKRYIMY----QL 116
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA- 868
+ L Y+H + +IHRD+K SNILL+S+ + K+ADFGLA+ L++ E
Sbjct: 117 L----KALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVL 169
Query: 869 ---VAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
VA + Y APE YT V D++S G +L E++ GK
Sbjct: 170 TDYVATRW-YRAPEILLGSTRYTKGV----DMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 5e-20
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 34/288 (11%)
Query: 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRI---WNNRKLNQKLEKEFIAEIEILGTIRH 750
+ +G+G Y+ G +AVK++ N +++ + EI ++ + H
Sbjct: 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH 62
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+I+++ ++ L E+M S+ L + +V + Q+
Sbjct: 63 PHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS----KYGAFKEAVIINYTE-----QLL 113
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK-AKIADFGLAKMLAKQ--GEPHTMS 867
+GL Y+H + QIIHRDVK +N+L+DS + +IADFG A LA + G
Sbjct: 114 ----RGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQG 166
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ G+ + APE + D++S G V++E+ T K ++H++ H A
Sbjct: 167 QLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-------HLAL 219
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYR-LALICTSTLPSSRPSMKEVLQ 974
I A P E ++ R + L C P RP +E+L+
Sbjct: 220 IFKIASA----TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 6e-20
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G+G G+V+ NG + VAVK + K + F+ E +I+ +RH
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTK-VAVKTL----KPGTMSPEAFLQEAQIMKKLRH 60
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLH---GRKRSLVSGSSSVHQHVLHWPTRL 807
+V+L+ S E +V EYM SL +L G+K L P +
Sbjct: 61 DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKK--------------LRLPQLV 106
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+A A+G+ Y+ IHRD+ + NIL+ KIADFGLA+++ E +
Sbjct: 107 DMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLI----EDDEYT 159
Query: 868 AVAGS---FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
A G+ + APE A + K D++SFG++L E+VT YG +
Sbjct: 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVT-----YGR-----VPYPGMT 209
Query: 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
E + + +++G P +Y L L C P RP+ E LQ
Sbjct: 210 NRE---VLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTF-EYLQ 255
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 1e-19
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 36/285 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+IG+G G+V R + G+ FVA+K + + Q+ ++F++E I+G H NI+
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNII 68
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
L ++ +++ E+MEN +LD +L G +V Q V + G A
Sbjct: 69 HLEGVVTKSRPVMIITEFMENGALDSFLR-----QNDGQFTVIQLV-------GMLRGIA 116
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK-QGEPHTMSAVAGSF 873
G+ Y+ +HRD+ + NIL++S K++DFGL++ L +P S++ G
Sbjct: 117 AGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKI 173
Query: 874 G--YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ APE K D++S+G+V+ E+++ E Y D + +
Sbjct: 174 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-------------MSNQDV 220
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+A+++ P ++ T +++L L C ++RP +++ L
Sbjct: 221 INAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTL 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 1e-19
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 699 IGSGGSGQVY----RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+GSG G VY + VA+K + + K KE + E ++ ++ H ++V
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVV 72
Query: 755 KLWC-CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+L C+SS L+ + M L ++ K ++ S Q++L+W QIA
Sbjct: 73 RLLGICLSS--QVQLITQLMPLGCLLDYVRNHKDNIGS------QYLLNWCV--QIA--- 119
Query: 814 AQGLCY--MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+G+ Y ++HRD+ + N+L+ + KI DFGLAK+L + +
Sbjct: 120 -KGMSYLEEKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV 173
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ A E K D++S+GV + EL+T Y I
Sbjct: 174 PIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-------------VEI 220
Query: 932 TDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980
D L+KG + +P C ++ VY + + C SRP+ KE++ +
Sbjct: 221 PDLLEKGERLPQPPICTID----VYMVLVKCWMIDAESRPTFKELINEFSKMA 269
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 2e-19
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 57/297 (19%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
+ + L E IG G G VY E VA+K++ + K + + ++ I E+ L +
Sbjct: 16 LFTDLRE---IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL 72
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS----VHQHVLHWP 804
RH N ++ C E++ LV EY GS+S VH+ L
Sbjct: 73 RHPNTIEYKGCYLREHTAWLVMEY-----------------CLGSASDILEVHKKPLQEV 115
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ---- 860
I GA QGL Y+H IHRD+K+ NILL K+ADFG A +++
Sbjct: 116 EIAAICHGALQGLAYLHSHER---IHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
G P+ M APE + + K+D++S G+ +EL K + S
Sbjct: 173 GTPYWM----------APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS- 221
Query: 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
A H A+ T L + + + C +P RPS +E+L+
Sbjct: 222 ---ALYHIAQNDSPT--LSSNDWSDYFRNFVDS-------CLQKIPQDRPSSEELLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 3e-19
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 33/222 (14%)
Query: 698 LIGSGGSGQVYRIDIN-GAGEFVAVKRIWNNRKLNQK---LEKEFI----AEIEILGTIR 749
LIG G G+VY + +N GE +AVK++ + + +K+ + +EIE L +
Sbjct: 8 LIGKGTYGRVY-LALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWL--HGR-KRSLVSGSSSVHQHVLHWPTR 806
H NIV+ ++E + EY+ S+ L +GR + LV + VL
Sbjct: 67 HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVR---FFTEQVL----- 118
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
+GL Y+H + I+HRD+K+ N+L+D++ KI+DFG++K +
Sbjct: 119 --------EGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQN 167
Query: 867 SAVAGSFGYFAPE--YAYTTKVNEKIDIYSFGVVLLELVTGK 906
++ GS + APE ++Y+ + K+DI+S G V+LE+ G+
Sbjct: 168 MSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 3e-19
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 43/283 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G G VY++ +F A+K + + ++QK ++ + EI IL ++ H NI+
Sbjct: 7 KLGKGSYGSVYKVKRLSDNQFYALKEV-DLGSMSQKEREDAVNEIRILASVNHPNIISYK 65
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
N +V EY L + + RK+ Q + W +Q+ +GL
Sbjct: 66 EAFLDGNKLCIVMEYAPFGDLSKAISKRKKK---RKLIPEQEI--WRIFIQLL----RGL 116
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ------GEPHTMSAVAG 871
+H +I+HRD+KS+NILL + KI D G++K+L K G PH
Sbjct: 117 QALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPH------- 166
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
Y APE + K DI+S G +L E+ T L R P
Sbjct: 167 ---YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP- 222
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
P Y +++ R L P RP+ ++L
Sbjct: 223 ----------PIYSQDLQNFIRSMLQ---VKPKLRPNCDKILA 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 4e-19
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 43/280 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G+V+ NG + VAVK + K + F+ E +I+ +RH +V+L+
Sbjct: 14 LGNGQFGEVWMGTWNGNTK-VAVKTL----KPGTMSPESFLEEAQIMKKLRHDKLVQLYA 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+S E +V EYM SL +L G R+L P + +A A G+
Sbjct: 69 VVSEE-PIYIVTEYMSKGSLLDFLKDGEGRAL------------KLPNLVDMAAQVAAGM 115
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS---FG 874
Y+ IHRD++S+NIL+ KIADFGLA+++ E + +A G+
Sbjct: 116 AYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLI----EDNEYTARQGAKFPIK 168
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
+ APE A + K D++SFG++L ELVT Y + + + +
Sbjct: 169 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-------------REVLEQ 215
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+++G PC + +++ L L C P RP+ E LQ
Sbjct: 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTF-EYLQ 254
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 4e-19
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 37/218 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G G VY+ GE VA+K I L+ E I EI ++ ++H N
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEI--------HLDAEEGTPSTAIREISLMKELKHEN 59
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
IV+L I +EN +LV+EYM+ + L +++ HG + +L + + L
Sbjct: 60 IVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQL--------- 109
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAV 869
+G+ + H + +++HRD+K N+L++ + K+ADFGLA+ G P +T S
Sbjct: 110 ---LKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAF---GIPVNTFSNE 160
Query: 870 AGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGK 906
+ Y AP+ ++ + IDI+S G ++ E++TG+
Sbjct: 161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 6e-19
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 698 LIGSGGSGQVYRI-DINGAGEFVAVKRIW----NNRKLNQKLEKEF---IAEIEILG-TI 748
+GSG G VY++ N +A+K I K ++ +K ++E+ I+ +
Sbjct: 7 HLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66
Query: 749 RHANIVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH---WP 804
RH NIV+ + EN +L +V + +E L + Q W
Sbjct: 67 RHPNIVRYYK-TFLENDRLYIVMDLIEGAPL--------GEHFNSLKEKKQRFTEERIWN 117
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+Q+ + L Y+H + +I+HRD+ +NI+L + K I DFGLAK ++
Sbjct: 118 IFVQMVLA----LRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK---QKQPES 168
Query: 865 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
+++V G+ Y PE EK D+++FG +L ++ T + Y SLA
Sbjct: 169 KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA------ 222
Query: 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
I +A+ + + E Y E++T V C + +RP + +V
Sbjct: 223 ----TKIVEAVYEPLPEGMYSEDVTDVITS---CLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 7e-19
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 41/284 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G VY+ + G E VAVK L L+++F+ E EIL H NIVKL
Sbjct: 2 KIGKGNFGDVYKGVLKGNTE-VAVKTC--RSTLPPDLKRKFLQEAEILKQYDHPNIVKLI 58
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V E + SL +L +K L LQ+++ AA G+
Sbjct: 59 GVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVK------------KLLQMSLDAAAGM 106
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG--- 874
Y+ IHRD+ + N L+ KI+DFG+++ E + V+
Sbjct: 107 EYLESKNC---IHRDLAARNCLVGENNVLKISDFGMSRE-----EEGGIYTVSDGLKQIP 158
Query: 875 --YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
+ APE + + D++S+G++L E + + Y
Sbjct: 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR------------- 205
Query: 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ ++ G P +YRL L C + P +RPS E+ L
Sbjct: 206 ERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL 249
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 7e-19
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 44/282 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRI-WNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G VY + E VAVK++ ++ ++ N+K + + I E++ L ++H N ++
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQ-DIIKEVKFLQQLKHPNTIEYK 87
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
C E++ LV EY + D VH+ L I GA QGL
Sbjct: 88 GCYLKEHTAWLVMEYCLGSASDLL-------------EVHKKPLQEVEIAAITHGALQGL 134
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H +IHRD+K+ NILL + K+ADFG A + ++ G+ + A
Sbjct: 135 AYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSPA------NSFVGTPYWMA 185
Query: 878 PEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE-EKPITD 933
PE + + K+D++S G+ +EL K + S A H A+ + P
Sbjct: 186 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNDSPTLQ 241
Query: 934 ALDKGIAEPCYLEEMTTVYR-LALICTSTLPSSRPSMKEVLQ 974
+ E T +R C +P RP+ E+L+
Sbjct: 242 S-----------NEWTDSFRGFVDYCLQKIPQERPASAELLR 272
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 9e-19
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 28/288 (9%)
Query: 699 IGSGGSGQVYRIDINGAGE-----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+V+ + + VAVK + ++ ++ ++F E E+L ++H +I
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTVLQHQHI 69
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
V+ + + L+V+EYM + L+R+L HG +++G V L L IA
Sbjct: 70 VRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS 129
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
A G+ Y+ + +HRD+ + N L+ KI DFG+++ +
Sbjct: 130 QIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 186
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKP 930
+ PE K + DI+SFGVVL E+ T GK+ Y +T E + E+P
Sbjct: 187 PIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERP 246
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
T C E VY + C P R +K++ L+
Sbjct: 247 RT----------CPPE----VYAIMQGCWQREPQQRMVIKDIHSRLQA 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 35/295 (11%)
Query: 691 SSLTESNLIGSGGSGQVY-----RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
S+L E +G G G+V+ I+ G V VK + + ++ L+ EF E+++
Sbjct: 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKAL--QKTKDENLQSEFRRELDMF 62
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+ H N+V+L ++ EY + L ++L K S + L
Sbjct: 63 RKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATK----SKDEKLKPPPLSTKQ 118
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++ + A G M H + +HRD+ + N L+ S+ + K++ L+K +
Sbjct: 119 KVALCTQIALG---MDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKL 175
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+A+ + APE + K D++SFGV++ E+ T E +
Sbjct: 176 RNALI-PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG------------L 222
Query: 926 AEEKPITDA----LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
++E+ + L+ + E C + +Y+L C + P RPS E++ L
Sbjct: 223 SDEEVLNRLQAGKLELPVPEGC----PSRLYKLMTRCWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 2e-18
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRI------WNNRKLNQKLEKEFIAEIEILGTIRHA 751
LIGSG G VY +GE +AVK++ +++ + + EI +L ++H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
NIV+ + + EY+ S+ +L++ + + ++ R QI
Sbjct: 67 NIVQYLGSSLDADHLNIFLEYVPGGSV--------AALLNNYGAFEETLVRNFVR-QI-- 115
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS---- 867
+GL Y+H IIHRD+K +NIL+D++ KI+DFG++K L E +++S
Sbjct: 116 --LKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL----EANSLSTKTN 166
Query: 868 ----AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
++ GS + APE T K DI+S G +++E++TGK
Sbjct: 167 GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 2e-18
Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 46/287 (16%)
Query: 697 NLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+IG G G VY ID +G AVK + NR + + ++F+ E I+ H N+
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSL--NRITDLEEVEQFLKEGIIMKDFSHPNV 58
Query: 754 VKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT-RLQIAI 811
+ L C+ SE S L+V YM+ HG R+ + + H PT + I
Sbjct: 59 LSLLGICLPSEGSPLVVLPYMK--------HGDLRNFIRSET-------HNPTVKDLIGF 103
Query: 812 G--AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK-MLAKQ-GEPHTMS 867
G A+G+ Y+ + + +HRD+ + N +LD F K+ADFGLA+ + K+ H +
Sbjct: 104 GLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ A E T K K D++SFGV+L EL+T Y D +
Sbjct: 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------VD 207
Query: 928 EKPITDALDKG--IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
IT L +G + +P Y + +Y + L C P RP+ E+
Sbjct: 208 SFDITVYLLQGRRLLQPEYCPD--PLYEVMLSCWHPKPEMRPTFSEL 252
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 3e-18
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA--EIEILGTIRHANIV 754
+G G VY+ G VA+K+I + K F A EI++L ++H NI+
Sbjct: 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
L +++ LV+E+ME L++ + + +S+V + + ++L
Sbjct: 66 GLLDVFGHKSNINLVFEFMET-DLEKVI--KDKSIVLTPADIKSYML------MTL---- 112
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + I+HRD+K +N+L+ S+ K+ADFGLA+ T V
Sbjct: 113 RGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVT--RW 167
Query: 875 YFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE Y V D++S G + EL+
Sbjct: 168 YRAPELLFGARHYGVGV----DMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 7e-18
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
S LT +GSG G V+ G + VA+K I ++ E +FI E +++ + H
Sbjct: 4 SELTFLKELGSGQFGVVHLGKWRGKID-VAIKMI-REGAMS---EDDFIEEAKVMMKLSH 58
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N+V+L+ + + +V EYM N L +L RK L L +
Sbjct: 59 PNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERK------------GKLGTEWLLDMC 106
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ + IHRD+ + N L+ + K++DFGLA+ + + S+
Sbjct: 107 SDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVL---DDQYTSSQG 160
Query: 871 GSF--GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD-EHTSLAEWAWRHYAE 927
F + PE ++ + K D++SFGV++ E+ + + Y ++ + E Y
Sbjct: 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL 220
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+P T VY + C P RP+ K++L L
Sbjct: 221 YRPKLAP--------------TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 8e-18
Identities = 65/249 (26%), Positives = 97/249 (38%), Gaps = 35/249 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIRHAN 752
+IG G G+V + + A+K + N +K +EK + E IL + H
Sbjct: 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYM-NKQKC---VEKGSVRNVLNERRILQELNHPF 61
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-I 811
+V LW E + LV + + L R+ +K + I I
Sbjct: 62 LVNLWYSFQDEENMYLVVDLLLGGDL-RYHLSQKVKFSEEQ-----------VKFWICEI 109
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
A L Y+H + IIHRD+K NILLD + I DF +A + + S G
Sbjct: 110 VLA--LEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS---G 161
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK-- 929
+ GY APE + +D +S GV E + GK G H+ R E
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG--HSRTIRDQIRAKQETADV 219
Query: 930 --PITDALD 936
P T + +
Sbjct: 220 LYPATWSTE 228
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.1 bits (209), Expect = 1e-17
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEK--EFIA--EIEILGTI-RHANI 753
+G G G VY GE VA+K K+ +K E + E++ L + H NI
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIK------KMKKKFYSWEECMNLREVKSLRKLNEHPNI 60
Query: 754 VKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
VKL EN +L V+EYME +L + + RK S SV + ++ QI
Sbjct: 61 VKLKEVFR-ENDELYFVFEYME-GNLYQLMKDRKGKPFS--ESVIRSII-----YQIL-- 109
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
QGL ++H HRD+K N+L+ KIADFGLA+ + + P+T +
Sbjct: 110 --QGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR-PPYT--DYVST 161
Query: 873 FGYFAPE-------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE Y + +DI++ G ++ EL T +
Sbjct: 162 RWYRAPEILLRSTSY------SSPVDIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 83.7 bits (208), Expect = 2e-17
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G+V + G+G++ A+K + + + K + + E IL +IRH +V L+
Sbjct: 9 LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYG 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQ-- 815
+++ LV EY+ L L RK +A AAQ
Sbjct: 69 SFQDDSNLYLVMEYVPGGELFSHL--RKSGRFP---------------EPVARFYAAQVV 111
Query: 816 -GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L Y+H I++RD+K N+LLDS+ KI DFG AK + + T + + G+
Sbjct: 112 LALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRV----KGRTYT-LCGTPE 163
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE + + +D ++ G+++ E++ G
Sbjct: 164 YLAPEIILSKGYGKAVDWWALGILIYEMLAG 194
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 83.1 bits (205), Expect = 2e-17
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
+ L IG G G V D G VAVK I N+ + F+AE ++ +R
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND-----ATAQAFLAEASVMTQLR 57
Query: 750 HANIVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H+N+V+L I E L +V EYM SL +L R RS++ G +
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK----------- 106
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
++ + + Y+ + +HRD+ + N+L+ + AK++DFGL K + T
Sbjct: 107 FSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDT 158
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902
+ APE K + K D++SFG++L E+
Sbjct: 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 51/231 (22%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-------FIAEIEILGTIRHA 751
IG G G VY+ GE VA+K+I +LE E I EI +L + H
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKI--------RLETEDEGVPSTAIREISLLKELNHP 58
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWL-----HGRKRSLVSGSSSVHQHVLHWPTR 806
NIV+L + SEN LV+E++ + L +++ G L+ S ++Q +
Sbjct: 59 NIVRLLDVVHSENKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIK--SYLYQLL------ 109
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
QG+ Y H + +++HRD+K N+L+D E K+ADFGLA+ +T
Sbjct: 110 --------QGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158
Query: 867 SAVAGSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
V + Y APE Y+T V DI+S G + E+V + GD
Sbjct: 159 EVV--TLWYRAPEILLGSRQYSTPV----DIWSIGCIFAEMVNRRPLFPGD 203
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+VY+ G F A K I + ++LE +F+ EI+IL +H NIV L+
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKII--QIESEEELE-DFMVEIDILSECKHPNIVGLYE 69
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS-SSVHQHVLHWPTRLQIAIGAAQGL 817
EN ++ E+ + +LD + +R L V + +L + L
Sbjct: 70 AYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQML-------------EAL 116
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
++H ++IHRD+K+ NILL + K+ADFG++ + G+ + A
Sbjct: 117 NFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR--DTFIGTPYWMA 171
Query: 878 PEYAYT-----TKVNEKIDIYSFGVVLLEL 902
PE + K DI+S G+ L+EL
Sbjct: 172 PEVVACETFKDNPYDYKADIWSLGITLIEL 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 38/297 (12%)
Query: 699 IGSGGSGQVYRIDING--AGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
IG G G+V++ G E VAVK + + + +F E ++ H NI
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ--ADFQREAALMAEFDHPNI 70
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV-----------LH 802
VKL + L++EYM L+ +L R RS + S H L
Sbjct: 71 VKLLGVCAVGKPMCLLFEYMAYGDLNEFL--RHRSPRAQCSLSHSTSSARKCGLNPLPLS 128
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
+L IA A G+ Y+ + +HRD+ + N L+ KIADFGL++ +
Sbjct: 129 CTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 185
Query: 863 PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 921
A + PE + + + D++++GVVL E+ + G + YG H + +
Sbjct: 186 YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY- 244
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ D + C LE +Y L +C S LPS RPS + +IL+R
Sbjct: 245 ---------VRDGNVLSCPDNCPLE----LYNLMRLCWSKLPSDRPSFASINRILQR 288
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 3e-17
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G VY E VA+K++ + K + + ++ I E++ L I+H N ++
Sbjct: 33 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
C E++ LV EY + D VH+ L I GA QGL
Sbjct: 93 CYLREHTAWLVMEYCLGSASDLL-------------EVHKKPLQEVEIAAITHGALQGLA 139
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H + +IHRD+K+ NILL + K+ADFG A + + ++ G+ + AP
Sbjct: 140 YLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAP 190
Query: 879 EYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE-EKPITDA 934
E + + K+D++S G+ +EL K + S A H A+ E P +
Sbjct: 191 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNESPTLQS 246
Query: 935 LDKGIAEPCYLEEMTTVYR-LALICTSTLPSSRPSMKEVLQ 974
E + +R C +P RP+ +E+L+
Sbjct: 247 -----------NEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 5e-17
Identities = 76/228 (33%), Positives = 109/228 (47%), Gaps = 43/228 (18%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-----FIAEIEILGTIRHA 751
IG G GQVY+ GE VA+K++ R N EKE I EI+IL + H
Sbjct: 13 GQIGEGTYGQVYKARDKDTGELVALKKV---RLDN---EKEGFPITAIREIKILRQLNHR 66
Query: 752 NIVKLWCCISSENSKL----------LVYEYMENQSLDRWLHGRKRS-LVSGSSSVHQHV 800
NIV L ++ + L LV+EYM D L G S LV S H+
Sbjct: 67 NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYM-----DHDLMGLLESGLVHFS---EDHI 118
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML-AK 859
+ +L +GL Y H +HRD+K SNILL+++ + K+ADFGLA++ ++
Sbjct: 119 KSFMKQL------LEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSE 169
Query: 860 QGEPHTMSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
+ P+T + + Y PE + ID++S G +L EL T K
Sbjct: 170 ESRPYTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 5e-17
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+V+ NG + VA+K + K + + F+ E +I+ +RH +V L+
Sbjct: 14 LGQGCFGEVWMGTWNGTTK-VAIKTL----KPGTMMPEAFLQEAQIMKKLRHDKLVPLYA 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+S E +V E+M SL +L G L P + +A A G+
Sbjct: 69 VVSEE-PIYIVTEFMGKGSLLDFLK-------EGDGKY----LKLPQLVDMAAQIADGMA 116
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS---FGY 875
Y+ IHRD++++NIL+ KIADFGLA+++ E + +A G+ +
Sbjct: 117 YIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLI----EDNEYTARQGAKFPIKW 169
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE A + K D++SFG++L ELVT Y + + + +
Sbjct: 170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG-------------MVNREVLEQV 216
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
++G PC +++ L +C P RP+ + + L
Sbjct: 217 ERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 82.4 bits (203), Expect = 6e-17
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 699 IGSGGSGQV-----YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+V Y + VAVK + + K+F E E+L ++H +I
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAELLTNLQHEHI 69
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRS-LVSGSSSVHQHVLHWPTRLQIA 810
VK + + ++V+EYM++ L+++L HG LV G + L L IA
Sbjct: 70 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE----PHTM 866
A G+ Y+ + +HRD+ + N L+ + KI DFG+++ + HTM
Sbjct: 130 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 186
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925
+ + PE K + D++SFGV+L E+ T GK+ + +T + E +
Sbjct: 187 LPIR----WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 242
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
E+P C E VY + L C P R ++KE+ +IL
Sbjct: 243 VLERP----------RVCPKE----VYDIMLGCWQREPQQRLNIKEIYKIL 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 7e-17
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G V ++ G +A K + K + K+ + E++I+ R IV +
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYG 70
Query: 759 CISSENSKLLVYEYMENQSLDRWLH--GRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+EN+ + E+M+ SLDR G + G +IA+ +G
Sbjct: 71 AFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILG---------------KIAVAVVEG 115
Query: 817 LCYM---HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
L Y+ H I+HRD+K SNIL++S + K+ DFG++ GE ++++A +F
Sbjct: 116 LTYLYNVHR-----IMHRDIKPSNILVNSRGQIKLCDFGVS------GE--LINSIADTF 162
Query: 874 ----GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y +PE K K D++S G+ ++EL GK
Sbjct: 163 VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 1e-16
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 698 LIGSGGSGQVYRID-INGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
+G G G V R + G+ VAVK + KL + +F+ E I+ ++ H N++
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVK-CLKSDKL-SDIMDDFLKEAAIMHSLDHENLI 59
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L+ + + ++V E SL L L A+ A
Sbjct: 60 RLYGVVLTH-PLMMVTELAPLGSLLDRLRKDALGHFL------ISTLC-----DYAVQIA 107
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA-VAGSF 873
G+ Y+ + + IHRD+ + NILL S+ K KI DFGL + L + + + M + F
Sbjct: 108 NGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPF 164
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
+ APE T + D++ FGV L E+ T YG+E
Sbjct: 165 AWCAPESLRTRTFSHASDVWMFGVTLWEMFT-----YGEE 199
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 34/289 (11%)
Query: 699 IGSGGSGQVY-----RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G VY + VA+K + N + +++E F+ E ++ ++
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIE--FLNEASVMKEFNCHHV 71
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR---LQIA 810
V+L +S+ L+V E M L +L R+ + + L PT +Q+A
Sbjct: 72 VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRR------PEAENNPGLGPPTLQKFIQMA 125
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A G+ Y+ + +HRD+ + N ++ + KI DFG+ + + +
Sbjct: 126 AEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGL 182
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
+ APE K D++SFGVVL E+ T LAE ++ + E+
Sbjct: 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT------------LAEQPYQGLSNEEV 230
Query: 931 ITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ +D G + P + + L +C P RP+ E++ L+
Sbjct: 231 LKFVIDGGHLDLPENCPDK--LLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 31/283 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G VY+ G VA+K++ ++ K ++ + EI++L + H N++K
Sbjct: 10 IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLA 69
Query: 759 CISSENSKLLVYEYMENQSLDRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
N +V E + L R + H +K+ + ++ W +Q+ L
Sbjct: 70 SFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTI------WKYFVQL----CSAL 119
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA--VAGSFGY 875
+MH + +I+HRD+K +N+ + + K+ D GL + + + T +A + G+ Y
Sbjct: 120 EHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK----TTAAHSLVGTPYY 172
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
+PE + N K DI+S G +L E+ + YGD+ +L Y+ K I
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNL-------YSLCKKIEKCD 224
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ Y EE+ L C + P RP + VLQ+ +
Sbjct: 225 YPPLPADHYSEELRD---LVSRCINPDPEKRPDISYVLQVAKE 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 2e-16
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G++Y E +K I + K+ K ++ E+ +L ++H NIV +
Sbjct: 8 IGEGSFGKIYLAKAKSDSEHCVIKEI-DLTKMPVKEKEASKKEVILLAKMKHPNIVTFFA 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+V EY + L + ++ ++ L S +L W +QI++G
Sbjct: 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFS-----EDQILSW--FVQISLG------ 113
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFK-AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
+ H +I+HRD+KS NI L AK+ DFG+A+ L E G+ Y +
Sbjct: 114 -LKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLS 170
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE N K DI+S G VL EL T K
Sbjct: 171 PEICQNRPYNNKTDIWSLGCVLYELCTLK 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 2e-16
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +VYR G VA+K++ ++ K + I EI++L + H N++K +
Sbjct: 10 IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 69
Query: 759 CISSENSKLLVYEYMENQSLDRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+N +V E + L R + H +K+ + +V W +Q+ L
Sbjct: 70 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTV------WKYFVQL----CSAL 119
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML-AKQGEPHTMSAVAGSFGYF 876
+MH + +++HRD+K +N+ + + K+ D GL + +K H++ G+ Y
Sbjct: 120 EHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYM 173
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+PE + N K DI+S G +L E+ + YGD+ Y+ K I
Sbjct: 174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--------YSLCKKIEQCDY 225
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ Y EE+ +L +C + P RP + V + +R
Sbjct: 226 PPLPSDHYSEELR---QLVNMCINPDPEKRPDITYVYDVAKR 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 81.3 bits (200), Expect = 2e-16
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRI-WNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G VY E VA+K++ ++ ++ N+K + + I E+ L +RH N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ-DIIKEVRFLQKLRHPNTIQYR 81
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
C E++ LV EY + D VH+ L + GA QGL
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLL-------------EVHKKPLQEVEIAAVTHGALQGL 128
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H +IHRDVK+ NILL K+ DFG A ++A + G+ + A
Sbjct: 129 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMA 179
Query: 878 PEYAYTT---KVNEKIDIYSFGVVLLELVTGK 906
PE + + K+D++S G+ +EL K
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 2e-16
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 24/220 (10%)
Query: 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIW---NNRKLNQKLEKEFIAEIEILGTIRH 750
T+ ++G G G VY + G+ +AVK++ +N +K ++ E+++L +++H
Sbjct: 3 TKGEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
NIV+ +N+ + E++ S+ S+++ + + V T+ QI
Sbjct: 62 VNIVQYLGTCLDDNTISIFMEFVPGGSIS--------SILNRFGPLPEPVFCKYTK-QIL 112
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS--- 867
G+ Y+H++C ++HRD+K +N++L K+ DFG A+ LA G T S
Sbjct: 113 ----DGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNML 165
Query: 868 -AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
++ G+ + APE + K DI+S G + E+ TGK
Sbjct: 166 KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-16
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE---F----IAEIEILGTIR 749
N I G G VYR GE VA+K++ K+EKE F + EI IL ++
Sbjct: 11 NRIEEGTYGVVYRARDKKTGEIVALKKL--------KMEKEKEGFPITSLREINILLKLQ 62
Query: 750 HANIVKLWCCI--SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NIV + + S+ + +V EY+E+ ++ L S + +L
Sbjct: 63 HPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLL------ 116
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTM 866
G+ ++H + I+HRD+K+SN+LL++ KI DFGLA+ + G P
Sbjct: 117 -------SGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAR---EYGSPLKPY 163
Query: 867 SAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGK 906
+ + + Y APE K + ID++S G + EL+T K
Sbjct: 164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 3e-16
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G G V + GE VA+K+ + ++ ++K + E+++L +RH NIV L
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLK 66
Query: 758 CCISSENSKLLVYEYMEN---QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ LV+EY+E + L+ G V S + Q
Sbjct: 67 EAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVR--SYIWQ--------------LL 110
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q + Y H IIHRD+K NIL+ K+ DFG A+ L + VA +
Sbjct: 111 QAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRW- 166
Query: 875 YFAPEYAY-TTKVNEKIDIYSFGVVLLELVTG 905
Y APE T + +D+++ G ++ EL+ G
Sbjct: 167 YRAPELLVGDTNYGKPVDVWAIGCIMAELLDG 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-16
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G VY+ +AVK I + +L+K+ ++E+EIL I+ +
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVI--PLDITVELQKQIMSELEILYKCDSPYIIGFYG 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
EN + E+M+ SLD + + +HVL +IA+ +GL
Sbjct: 67 AFFVENRISICTEFMDGGSLDVY------------RKIPEHVLG-----RIAVAVVKGLT 109
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+ + +I+HRDVK SN+L+++ + K+ DFG++ L G+ Y AP
Sbjct: 110 YL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAP 162
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGK 906
E + D++S G+ +EL G+
Sbjct: 163 ERISGEQYGIHSDVWSLGISFMELALGR 190
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 4e-16
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 42/231 (18%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
L + IG G G V ++ +G +AVKRI + +++K +K + ++++ +R
Sbjct: 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRST--VDEKEQKRLLMDLDV--VMRS 59
Query: 751 AN---IVKLWCCISSENSKLLVYEYMENQSLD---RWLHGRKRSLVSGSSSVHQHVLHWP 804
++ IVK + + E + E M+ SLD ++++ +S P
Sbjct: 60 SDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKS-------------VIP 105
Query: 805 TRL--QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML----A 858
+ +IA+ + L Y+ + +IIHRDVK SNILLD K+ DFG++ L A
Sbjct: 106 EEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163
Query: 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNE---KIDIYSFGVVLLELVTGK 906
K + AG Y APE + + + D++S G+ L E+ TGK
Sbjct: 164 KTRD-------AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 79.6 bits (196), Expect = 4e-16
Identities = 88/292 (30%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 699 IGSGGSGQVY--RIDING--AGEFVAVKRIWNNRKLNQ--KLEKEFIAEIEILGTIRHAN 752
+G G G+V R D G GE VAVK + N L+KE IEIL + H N
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE----IEILRNLYHEN 67
Query: 753 IVKL--WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
IVK C N L+ E++ + SL +L K + + +L+ A
Sbjct: 68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKI------------NLKQQLKYA 115
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ +G+ Y+ + Q +HRD+ + N+L++SE + KI DFGL K + E +T+
Sbjct: 116 VQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 871 GS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
S ++APE +K D++SFGV L EL+T Y D +E
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT-----YCD-------------SESS 214
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTS--TLPSSRPSMKEVLQILRRC 979
P+T L K I TV RL + LP +EV Q++R+C
Sbjct: 215 PMTLFL-KMIGPT---HGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKC 262
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 5e-16
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 25 FEVIPQSPNT--EERTILLNLKQQLGNPPSLQSWTSTSSPC-----DWPEITCTFNS--- 74
FE+I T EE + L LK LG P W PC W C F+S
Sbjct: 360 FEIITAESKTLLEEVSALQTLKSSLGLPLRF-GWNG--DPCVPQQHPWSGADCQFDSTKG 416
Query: 75 ---VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ G+ L ++ + IP I L++L +I+LS NSI G P L + T L+ LDLS N
Sbjct: 417 KWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYN 476
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIG 166
F G IP + +++ L+ ++L GN+ SG +P ++G
Sbjct: 477 SFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-------FIAEIEILGTIRHA 751
IG G G VY+ G+ VA+K+I +LE E I EI +L ++H
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKI--------RLESEEEGVPSTAIREISLLKELQHP 59
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
NIV L + E+ L++E++ + L ++L + + V ++ QI
Sbjct: 60 NIVCLQDVLMQESRLYLIFEFL-SMDLKKYLDSLPKGQYMDAELVKSYLY------QIL- 111
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
QG+ + H + +++HRD+K N+L+D++ K+ADFGLA+ +T V
Sbjct: 112 ---QGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVV-- 163
Query: 872 SFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
+ Y APE + + + +DI+S G + E+ T K +GD
Sbjct: 164 TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G V + G+ VA+K+ + ++ ++K + EI +L +RH N+V L
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLI 66
Query: 758 CCISSENSKLLVYEYMENQSLD---RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ LV+E++++ LD ++ +G S V + L QI G
Sbjct: 67 EVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRV-------RKYL-----FQILRGI- 113
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
C+ H+ IIHRD+K NIL+ K+ DFG A+ LA GE +T VA +
Sbjct: 114 -EFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT-DYVATRW- 165
Query: 875 YFAPEYAY-TTKVNEKIDIYSFGVVLLELVTG 905
Y APE TK +DI++ G ++ E++TG
Sbjct: 166 YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 5e-16
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 41/219 (18%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEK-----EFIA-EIEILGTIRHA 751
IG G G+VY+ + VA+K I LE+ E I EI+ L R
Sbjct: 8 CIGKGSFGEVYKAIDKRTNQVVAIKVI--------DLEEAEDEIEDIQQEIQFLSQCRSP 59
Query: 752 NIVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
I K + + SKL ++ EY S L K + + + VL
Sbjct: 60 YITKYYGSFL-KGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILRE-VLL-------- 109
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS--- 867
GL Y+H + IHRD+K++NILL E K+ADFG++ L TMS
Sbjct: 110 -----GLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLT-----STMSKRN 156
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ + APE + +EK DI+S G+ +EL G+
Sbjct: 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 6e-16
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 509 LLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEI 568
L LD L G +P+ I L ++NL+ N + G IP ++GS+ + LDLS N F+G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 569 PPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDS---FLNNSNLCVKNPIINLPKCPS 624
P +GQL L NL+ N L G +P + F +N+ LC I L C
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLC---GIPGLRACGP 539
Query: 625 RFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLRR 665
KI +A + +A L LV ++ W+ R + R
Sbjct: 540 HLSVGAKIG---IAFGVSVAFL-FLVICAMCWWKRRQNILR 576
|
Length = 623 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 6e-16
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 29/299 (9%)
Query: 690 LSSLTESNLIGSGGSGQVYR---IDINGAGE--FVAVKRIWNNRKLNQKLEKEFIAEIEI 744
LT +G G GQV + + ++ E VAVK + ++ +K + ++E+E+
Sbjct: 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEM 68
Query: 745 LGTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS---VHQHV 800
+ I +H NI+ L + E +V EY + +L +L R+ S +
Sbjct: 69 MKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEET 128
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L + A A+G+ ++ + + IHRD+ + N+L+ + KIADFGLA+ +
Sbjct: 129 LTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHI 185
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAE 919
+ + APE + + D++SFGV+L E+ T + Y G L +
Sbjct: 186 DYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245
Query: 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
Y EKP C E +Y L C +PS RP+ K++++ L R
Sbjct: 246 LLKEGYRMEKPQN----------CTQE----LYHLMRDCWHEVPSQRPTFKQLVEDLDR 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 6e-16
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 37/206 (17%)
Query: 714 GAGEFVAVKRIW-----NNRKLNQKLEKE-------FIAEIEILGTIRHANIVKLWCCIS 761
GAG+F V W + K+ K K+ F+AE ++ ++H +V+L+ ++
Sbjct: 15 GAGQFGEV---WMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT 71
Query: 762 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH 821
E ++ EYMEN SL +L + L + +A A+G+ ++
Sbjct: 72 QE-PIYIITEYMENGSLVDFL-----------KTPEGIKLTINKLIDMAAQIAEGMAFIE 119
Query: 822 HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS---FGYFAP 878
IHRD++++NIL+ KIADFGLA+++ E + +A G+ + AP
Sbjct: 120 RK---NYIHRDLRAANILVSETLCCKIADFGLARLI----EDNEYTAREGAKFPIKWTAP 172
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVT 904
E K D++SFG++L E+VT
Sbjct: 173 EAINYGTFTIKSDVWSFGILLTEIVT 198
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEK--EFIAEIEILGTIRHANIVKL 756
+G GG GQV+ GE VA+KR+ + L KL + + E +IL T + +VKL
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRM--KKSLLFKLNEVRHVLTERDILTTTKSEWLVKL 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQ-HVLHWPTRLQIAIGAAQ 815
+ L EY+ G R+L++ + + H + + A+ A
Sbjct: 67 LYAFQDDEYLYLAMEYVPG--------GDFRTLLNNLGVLSEDHARFYMAEMFEAVDALH 118
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L Y IHRD+K N L+D+ K+ DFGL+K G ++V GS Y
Sbjct: 119 ELGY---------IHRDLKPENFLIDASGHIKLTDFGLSK-----GIVTYANSVVGSPDY 164
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
APE + +D +S G +L E + G
Sbjct: 165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCG 194
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 1e-15
Identities = 70/226 (30%), Positives = 100/226 (44%), Gaps = 43/226 (19%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IGSG G V G VA+K+I N + K + EI++L +RH NI+ L
Sbjct: 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGL 64
Query: 757 WCCI-----SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH-QHVLHWPTRLQIA 810
+ N +V E ME L + + + L + H Q+ L+ QI
Sbjct: 65 LDILRPPSPEDFNDVYIVTELMET-DLHKVIK-SPQPL----TDDHIQYFLY-----QIL 113
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+GL Y+H + +IHRD+K SNIL++S KI DFG LA+ +P
Sbjct: 114 ----RGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFG----LARGVDPDEDEKGF 162
Query: 871 GSFG-----YFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE YT + IDI+S G + EL+T K
Sbjct: 163 LTEYVVTRWYRAPELLLSSSRYT----KAIDIWSVGCIFAELLTRK 204
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-AEIEILGTIRHANIVKLW 757
I G G+V+ G+ A+K I + +K + + + E +IL + +VKL+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVI-KKADMIRKNQVDQVLTERDILSQAQSPYVVKLY 59
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQG 816
+ + LV EY+ L SL+ S+ + V R+ IA I
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDL--------ASLLENVGSLDEDV----ARIYIAEI--VLA 105
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM------LAKQGEPHTMSAVA 870
L Y+H + IIHRD+K NIL+DS K+ DFGL+K+ + + +
Sbjct: 106 LEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIV 162
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ Y APE ++ +D +S G +L E + G
Sbjct: 163 GTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 719 VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778
VAVK + + + ++F+ E++IL + NI +L + + ++ EYMEN L
Sbjct: 49 VAVKVLRPD--ASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDL 106
Query: 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838
+++L +K + + + L + T L +A A G M + + +HRD+ + N
Sbjct: 107 NQFL--QKHVAETSGLACNSKSLSFSTLLYMATQIASG---MRYLESLNFVHRDLATRNC 161
Query: 839 LLDSEFKAKIADFGLAKMLAK------QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDI 892
L+ + KIADFG+++ L QG A + A E K K D+
Sbjct: 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQG-----RAPL-PIRWMAWESVLLGKFTTKSDV 215
Query: 893 YSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDA--LDKGIAEPCYLEEMT 949
++FGV L E++T +E Y H +++ I +A + YL
Sbjct: 216 WAFGVTLWEILTLCREQPYE------------HLTDQQVIENAGHFFRDDGRQIYLPRPP 263
Query: 950 ----TVYRLALICTSTLPSSRPSMKEVLQILRR 978
+Y L L C RP+ +E+ L+R
Sbjct: 264 NCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G+ + G+ +K I N K++ K +E E+ +L ++H NIV+
Sbjct: 8 IGEGSFGKAILVKSKEDGKQYVIKEI-NISKMSPKEREESRKEVAVLSNMKHPNIVQYQE 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ +V +Y E L + ++ ++ L +L W ++ +A
Sbjct: 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFP-----EDQILDWFVQICLA-------- 113
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
+ H +I+HRD+KS NI L + K+ DFG+A++L E G+ Y +P
Sbjct: 114 -LKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSP 170
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEA 908
E N K DI++ G VL E+ T K A
Sbjct: 171 EICENRPYNNKSDIWALGCVLYEMCTLKHA 200
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTI 748
L+ L IGSG GQVY++ G +AVK++ R N++ K + ++++ L +
Sbjct: 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLKSH 71
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
IVK + +++ + E M LD+ L KR + + +L +
Sbjct: 72 DCPYIVKCYGYFITDSDVFICMELMST-CLDKLL---KRI----QGPIPEDILG-----K 118
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
+ + + L Y+ +IHRDVK SNILLD+ K+ DFG++ L + T S
Sbjct: 119 MTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV-DSKAKTRS- 174
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDI----YSFGVVLLELVTGK 906
AG Y APE N K DI +S G+ L+EL TG+
Sbjct: 175 -AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
+IG G G+VY+ G+ VA+K + + + E+E E IL H NI
Sbjct: 13 VIGEGTYGKVYKARHKKTGQLVAIKIM----DIIEDEEEEIKEEYNILRKYSNHPNIATF 68
Query: 757 WCCI-----SSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+ + +L LV E S+ + K G + + + I
Sbjct: 69 YGAFIKKNPPGNDDQLWLVMELCGGGSVTDLV---KGLRKKGKRLKEEWIAY------IL 119
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK-QGEPHTMSAV 869
+GL Y+H + ++IHRD+K NILL + K+ DFG++ L G +T
Sbjct: 120 RETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT---F 173
Query: 870 AGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
G+ + APE + + D++S G+ +EL GK D H
Sbjct: 174 IGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK-PPLCDMH 222
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G+V+ N + + VAVK + K + F+ E ++ T++H +V+L+
Sbjct: 14 LGAGQFGEVWMGYYNNSTK-VAVKTL----KPGTMSVQAFLEEANLMKTLQHDKLVRLYA 68
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
++ E ++ EYM SL +L + V P + + A+G+
Sbjct: 69 VVTKEEPIYIITEYMAKGSLLDFLKSDEGGKV-----------LLPKLIDFSAQIAEGMA 117
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS---FGY 875
Y+ IHRD++++N+L+ KIADFGLA+++ E + +A G+ +
Sbjct: 118 YIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI----EDNEYTAREGAKFPIKW 170
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVT-GK-----------------------EANYG 911
APE K D++SFG++L E+VT GK N
Sbjct: 171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCP 230
Query: 912 DEHTSLAEWAWRHYAEEKPITDAL 935
DE + + W+ AEE+P D L
Sbjct: 231 DELYDIMKTCWKEKAEERPTFDYL 254
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 3e-15
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 700 GSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCC 759
G+ G +YR + + V K + N +L++K ++ + EI IL ++H NI+ +
Sbjct: 11 GAFGEATLYRRTEDDS--LVVWKEV-NLTRLSEKERRDALNEIVILSLLQHPNIIAYYNH 67
Query: 760 ISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA--IGAAQGL 817
+N+ L+ EY +L + V Q + + + +
Sbjct: 68 FMDDNTLLIEMEYANGGTLYDKI-------------VRQKGQLFEEEMVLWYLFQIVSAV 114
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS-AVAGSFGYF 876
Y+H I+HRD+K+ NI L K+ DFG++K+L G ++M+ V G+ Y
Sbjct: 115 SYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKIL---GSEYSMAETVVGTPYYM 168
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 908
+PE K N K DI++ G VL EL+T K
Sbjct: 169 SPELCQGVKYNFKSDIWALGCVLYELLTLKRT 200
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 3e-15
Identities = 81/301 (26%), Positives = 126/301 (41%), Gaps = 55/301 (18%)
Query: 697 NLIGSGGSGQVYR-----IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
N +GSG G+VY I G+G VAVK + +K KEF+ E ++ H
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK--KEFLKEAHLMSNFNH 58
Query: 751 ANIVK-LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
NIVK L C+ +E + ++ E ME L +L + +L L I
Sbjct: 59 PNIVKLLGVCLLNE-PQYIIMELMEGGDLLSYLRDARVERFGPP------LLTLKELLDI 111
Query: 810 AIGAAQGLCY---MHHDCTPQIIHRDVKSSNILL-----DSEFKAKIADFGLAKMLAK-- 859
+ A+G Y MH IHRD+ + N L+ D++ KI DFGLA+ + K
Sbjct: 112 CLDVAKGCVYLEQMH------FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSD 165
Query: 860 --QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+ E + V + APE K + D++SFGV++ E++T + Y +L
Sbjct: 166 YYRKEGEGLLPVR----WMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY----PAL 217
Query: 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTT--VYRLALICTSTLPSSRPSMKEVLQI 975
+ G + E +Y+L C + PS RP+ + +I
Sbjct: 218 NNQEVLQHVTA--------GGRLQK---PENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266
Query: 976 L 976
L
Sbjct: 267 L 267
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 3e-15
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 31/232 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEF--------------VAVKRIWNNRKLNQKLEKEFIAEIEI 744
+G G G+V+ + G EF VAVK + + + + +F+ EI+I
Sbjct: 13 LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD--VTKTARNDFLKEIKI 70
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK-RSLVSGSSSV----HQH 799
+ +++ NI++L S++ ++ EYMEN L+++L R+ S + ++++ +
Sbjct: 71 MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIAN 130
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
+L+ QIA G M + + +HRD+ + N L+ + + KIADFG+++ L
Sbjct: 131 LLYMAV--QIASG-------MKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYS 181
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANY 910
+ A E K D+++FGV L E+ T KE Y
Sbjct: 182 GDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 3e-15
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 49/293 (16%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFV----AVKRIWNNRKLNQKLEKEFIAEIEILG 746
+ L ++GSG G VY+ GE V A+K + N K EF+ E I+
Sbjct: 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMA 64
Query: 747 TIRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
++ H ++V+L C+S + LV + M + L ++H K ++ S Q +L+W
Sbjct: 65 SMDHPHLVRLLGVCLSP--TIQLVTQLMPHGCLLDYVHEHKDNIGS------QLLLNWCV 116
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++ A+G+ Y+ +++HRD+ + N+L+ S KI DFGLA++L +G+
Sbjct: 117 QI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKE 165
Query: 866 MSAVAGSF--GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+A G + A E + K + D++S+GV + EL+T Y T
Sbjct: 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------- 217
Query: 924 HYAEEKPITDALDKGIAEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
+ I D L+KG P C ++ VY + + C SRP KE+
Sbjct: 218 -----REIPDLLEKGERLPQPPICTID----VYMVMVKCWMIDADSRPKFKEL 261
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 72/223 (32%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE---KEFIAEIEILGTIRHANIVK 755
IG G G VY+ E +A+K+I +L Q+ E I EI +L ++H NIV+
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKI----RLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L + SE LV+EY++ LD K+ + S L QI G A
Sbjct: 66 LQDVVHSEKRLYLVFEYLD---LD-----LKKHMDSSPDFAKNPRLIKTYLYQILRGIA- 116
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKA-KIADFGLAKMLAKQGEPHTMSAVAGSFG 874
C+ H +++HRD+K N+L+D A K+ADFGLA+ T V +
Sbjct: 117 -YCHSH-----RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV--TLW 168
Query: 875 YFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
Y APE Y+T V DI+S G + E+V K GD
Sbjct: 169 YRAPEILLGSRHYSTPV----DIWSVGCIFAEMVNQKPLFPGD 207
|
Length = 294 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 7e-15
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 47/223 (21%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA---NIV 754
LIG G G VYR G VA+K I N + E+ +L +R + NI
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKII--NLDTPDDDVSDIQREVALLSQLRQSQPPNIT 65
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS-------SSVHQHVLHWPTRL 807
K + ++ EY E S+ R+L+ S + + VL
Sbjct: 66 KYYGSYLKGPRLWIIMEYAEGGSV--------RTLMKAGPIAEKYISVIIREVL------ 111
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
L Y+H +IHRD+K++NIL+ + K+ DFG+A +L + S
Sbjct: 112 -------VALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR--S 159
Query: 868 AVAGSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE Y TK DI+S G+ + E+ TG
Sbjct: 160 TFVGTPYWMAPEVITEGKYYDTKA----DIWSLGITIYEMATG 198
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 7e-15
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
++G G G+V+ ++ G +F A+K + + L + + E +L H + L
Sbjct: 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+C ++ + V EY+ G H H + AA+
Sbjct: 62 YCTFQTKENLFFVMEYLN----------------GGDLMFHIQSCHKFDLPRATFYAAEI 105
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK--MLAKQGEPHTMSAVAGSFG 874
+C + + I++RD+K NILLD++ KIADFG+ K ML G+ T G+
Sbjct: 106 ICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML---GDAKT-CTFCGTPD 161
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
Y APE K N +D +SFGV+L E++ G+ +G + L
Sbjct: 162 YIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL 204
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 8e-15
Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 27/212 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG G+V + + A+K + + ++ +E EIL H IVKL+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ ++ EY L W R R L + R IA
Sbjct: 61 TFKDKKYIYMLMEYCLGGEL--WTILRDRGLFD----------EYTARFYIA-CVVLAFE 107
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H+ II+RD+K N+LLDS K+ DFG AK L + T G+ Y AP
Sbjct: 108 YLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF---CGTPEYVAP 161
Query: 879 EY----AYTTKVNEKIDIYSFGVVLLELVTGK 906
E Y V D +S G++L EL+TG+
Sbjct: 162 EIILNKGYDFSV----DYWSLGILLYELLTGR 189
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 1e-14
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
S L IG G +G V G VAVK++ + RK Q+ E F E+ I+ +H
Sbjct: 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKM-DLRK-QQRRELLF-NEVVIMRDYQH 75
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
NIV+++ + +V E++E +L D H R ++ +
Sbjct: 76 PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---------------MNEEQIATV 120
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+ + L ++H +IHRD+KS +ILL S+ + K++DFG ++K+ P S V
Sbjct: 121 CLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-VPRRKSLV 176
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ + APE ++DI+S G++++E+V G+
Sbjct: 177 -GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-14
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLW 757
IG G SG VY G+ VA+K++ L Q+ +KE I EI ++ +H NIV
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQM----NLQQQPKKELIINEILVMRENKHPNIVNYL 82
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA--- 814
+ +V EY+ SL +V+ T + AA
Sbjct: 83 DSYLVGDELWVVMEYLAGGSLT--------DVVT------------ETCMDEGQIAAVCR 122
Query: 815 ---QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL-AKMLAKQGEPHTMSAVA 870
Q L ++H + Q+IHRD+KS NILL + K+ DFG A++ +Q + TM
Sbjct: 123 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---V 176
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
G+ + APE K+DI+S G++ +E+V G E Y +E+
Sbjct: 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 1e-14
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G V ++ +G +A K I + ++ + + I E+++L IV +
Sbjct: 13 LGAGNGGVVTKVQHKPSGLIMARKLI--HLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 70
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
S+ + E+M+ SLD+ L KR + + +L +++I +GL
Sbjct: 71 AFYSDGEISICMEHMDGGSLDQVLKEAKR--------IPEEILG-----KVSIAVLRGLA 117
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+ QI+HRDVK SNIL++S + K+ DFG++ L ++ G+ Y +P
Sbjct: 118 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 171
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGK 906
E T + + DI+S G+ L+EL G+
Sbjct: 172 ERLQGTHYSVQSDIWSMGLSLVELAIGR 199
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 1e-14
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
S LT IGSG G V+ + VA+K I + E++FI E +++ + H
Sbjct: 4 SELTLVQEIGSGQFGLVWLGYWLEKRK-VAIKTI----REGAMSEEDFIEEAQVMMKLSH 58
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ + + LV+E+ME+ L +L ++ T L +
Sbjct: 59 PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQ------------ETLLGMC 106
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ +G+ Y+ +IHRD+ + N L+ K++DFG+ + + + S+
Sbjct: 107 LDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVL---DDQYTSSTG 160
Query: 871 GSF--GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS------------ 916
F + +PE +K + K D++SFGV++ E+ + + Y + S
Sbjct: 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL 220
Query: 917 ------------LAEWAWRHYAEEKP 930
L + W+ E++P
Sbjct: 221 YKPRLASQSVYELMQHCWKERPEDRP 246
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 1e-14
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA---EIEILGTIRHANIV 754
L+G G G+VY G +AVK++ + +Q+ KE A EI++L +RH IV
Sbjct: 9 LLGRGAFGEVYLCYDADTGRELAVKQVPFDPD-SQETSKEVNALECEIQLLKNLRHDRIV 67
Query: 755 KLWCCISS-ENSKLLVY-EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + C+ E KL ++ EYM S+ + + ++ ++V TR QI
Sbjct: 68 QYYGCLRDPEEKKLSIFVEYMPGGSI--------KDQLKAYGALTENVTRRYTR-QIL-- 116
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAG 871
QG+ Y+H + I+HRD+K +NIL DS K+ DFG +K + T + +V G
Sbjct: 117 --QGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTG 171
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + +PE K D++S ++E++T K
Sbjct: 172 TPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 2e-14
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 699 IGSGGSGQVYRIDI-NGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+V+ + N E VAVK + + + K+F E E+L ++H +I
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTL---KDASDNARKDFHREAELLTNLQHEHI 69
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
VK + + ++V+EYM++ L+++L HG L++ + + L L IA
Sbjct: 70 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE--LTQSQMLHIAQ 127
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE----PHTMS 867
A G+ Y+ + +HRD+ + N L+ KI DFG+++ + HTM
Sbjct: 128 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 184
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926
+ + PE K + D++S GVVL E+ T GK+ Y + + E +
Sbjct: 185 PIR----WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 240
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV---LQILRRCCP 981
++P T C E VY L L C P R ++KE+ LQ L + P
Sbjct: 241 LQRPRT----------CPKE----VYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASP 284
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 2e-14
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-----EI 742
++ + IG G G V G VA+K+I E + EI
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKI-------SPFEHQTFCQRTLREI 54
Query: 743 EILGTIRHANIVKLWCCISSE-----NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH 797
+IL +H NI+ + I N +V E ME L+ + + + S +
Sbjct: 55 KILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETD-----LY---KLIKTQHLS-N 105
Query: 798 QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
H+ ++ QI +GL Y+H + ++HRD+K SN+LL++ KI DFGLA+ +
Sbjct: 106 DHIQYF--LYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLAR-I 155
Query: 858 AKQGEPHT--MSAVAGSFGYFAPEYAYTTKVNEK-IDIYSFGVVLLELVTGK 906
A HT ++ + Y APE +K K IDI+S G +L E+++ +
Sbjct: 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 2e-14
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 45/225 (20%)
Query: 695 ESNLIGSGGSGQVYRIDINGAGEFVAVK--RIWNNRKLNQKLEKEFIAEIEILGTIR--- 749
E IG G G VY+ G FVA+K R+ + + + + EI +L +
Sbjct: 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE---EGIPLSTLREIALLKQLESFE 59
Query: 750 HANIVKLW-----CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSG-SSSVHQHVLHW 803
H NIV+L E LV+E+++ Q L +L + G + ++
Sbjct: 60 HPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYL---SKCPKPGLPPETIKDLMR- 114
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
Q+ +G+ ++H + +I+HRD+K NIL+ S+ + KIADFGLA++ + +
Sbjct: 115 ----QLL----RGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE--- 160
Query: 864 HTMS--AVAGSFGYFAPEY----AYTTKVNEKIDIYSFGVVLLEL 902
M+ +V + Y APE +Y T V D++S G + EL
Sbjct: 161 --MALTSVVVTLWYRAPEVLLQSSYATPV----DMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G V + E VA+K+I N N+ K + EI++L + H N++ +
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKI-ANAFDNRIDAKRTLREIKLLRHLDHENVIAIKD 71
Query: 759 CI-----SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+ + N +VYE M D LH RS + S Q+ L+ R
Sbjct: 72 IMPPPHREAFNDVYIVYELM-----DTDLHQIIRSSQTLSDDHCQYFLYQLLR------- 119
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
GL Y+H + ++HRD+K SN+LL++ KI DFGLA+ +++G+ T V +
Sbjct: 120 --GLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV--TR 172
Query: 874 GYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE YTT ID++S G + EL+ K
Sbjct: 173 WYRAPELLLNCSEYTT----AIDVWSVGCIFAELLGRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 2e-14
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEF----VAVKRI--WNNRKLNQKLEKEFIAEIEI 744
+ L + L+GSG G V++ G+ VA+K I + R+ Q++ +A
Sbjct: 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLA---- 62
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+G++ HA IV+L I S LV + SL + + SL Q +L+W
Sbjct: 63 MGSLDHAYIVRL-LGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDP------QRLLNWC 115
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
++ A+G+ Y+ ++HR++ + NILL S+ +IADFG+A +L + +
Sbjct: 116 VQI------AKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY 166
Query: 865 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
S + A E + + D++S+GV + E+++ YG E +A
Sbjct: 167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS-----YGAE-----PYAGMR 216
Query: 925 YAEEKPITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
E + D L+KG +A+P C ++ VY + + C + RP+ KE+
Sbjct: 217 PHE---VPDLLEKGERLAQPQICTID----VYMVMVKCWMIDENVRPTFKEL 261
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 719 VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778
VA+K I K E EFI E +++ + H +V+L+ + + +V EYM N L
Sbjct: 31 VAIKMI----KEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCL 86
Query: 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838
+L R H L++ +G+ Y+ + Q IHRD+ + N
Sbjct: 87 LNYL----RE--------HGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNC 131
Query: 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF--GYFAPEYAYTTKVNEKIDIYSFG 896
L+D + K++DFGL++ + + S+V F + PE +K + K D+++FG
Sbjct: 132 LVDDQGCVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFG 188
Query: 897 VVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG--IAEPCYLEEMTTVYRL 954
V++ E+ SL + + + + + + +G + P E VY +
Sbjct: 189 VLMWEVY------------SLGKMPYERFNNSE-TVEKVSQGLRLYRPHLASE--KVYAI 233
Query: 955 ALICTSTLPSSRPSMKEVL 973
C RP+ +++L
Sbjct: 234 MYSCWHEKAEERPTFQQLL 252
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-----EIEILGTIRHA 751
+ +GSG GQV G VA+K KL++ + A E+ +L + H
Sbjct: 21 SPVGSGAYGQVCSAFDTKTGRKVAIK------KLSRPFQSAIHAKRTYRELRLLKHMDHE 74
Query: 752 NIVKLWCCI--SSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
N++ L +S LV M L+ + + Q +++
Sbjct: 75 NVIGLLDVFTPASSLEDFQDVYLVTHLM-----GADLNNIVKCQKLSDDHI-QFLVY--- 125
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
QI +GL Y+H + IIHRD+K SNI ++ + + KI DFGLA+ +
Sbjct: 126 --QIL----RGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE----- 171
Query: 866 MSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 916
M+ + Y APE N+ +DI+S G ++ EL+TGK G +H
Sbjct: 172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID 223
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 3e-14
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE---KEFIAEIEILGTIRHANIVK 755
IG G G V++ E VA+KR+ +L+ E + EI +L ++H NIV+
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRV----RLDDDDEGVPSSALREICLLKELKHKNIVR 63
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L+ + S+ LV+EY + Q L K+ S + + ++ Q+ G A
Sbjct: 64 LYDVLHSDKKLTLVFEYCD-QDL-------KKYFDSCNGDIDPEIVKSFM-FQLLKGLA- 113
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFG 874
C+ H+ ++HRD+K N+L++ + K+ADFGLA+ G P SA +
Sbjct: 114 -FCHSHN-----VLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVRCYSAEVVTLW 164
Query: 875 YFAPEYAYTTKV-NEKIDIYSFGVVLLELVTG 905
Y P+ + K+ + ID++S G + EL
Sbjct: 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-14
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 29/227 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
LIG GG G+VY VA+K+I + N L+K F+ E +I + H IV ++
Sbjct: 9 LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHG--RKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
S + Y+E +L L +K SL S L I
Sbjct: 69 SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESL----SKELAEKTSVGAFLSIFHKICA 124
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP------------ 863
+ Y+H + ++HRD+K NILL + I D+G A K+ E
Sbjct: 125 TIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIF--KKLEEEDLLDIDVDERN 179
Query: 864 ---HTMS---AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT 904
+M+ + G+ Y APE +E DIY+ GV+L +++T
Sbjct: 180 ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226
|
Length = 932 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 699 IGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G+V + + G + VAVK + N + ++ ++E +L + H ++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHV 65
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKR-------SLVSGSSSVHQHVLHWPTR 806
+KL+ S + LL+ EY + SL +L ++ S + +SS +
Sbjct: 66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125
Query: 807 LQIAIGAAQGLCY-MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
+ I A + M + +++HRD+ + N+L+ K KI+DFGL++ + ++
Sbjct: 126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK 185
Query: 866 MSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 920
S + A E + YTT+ D++SFGV+L E+VT G G L
Sbjct: 186 RSKGRIPVKWMAIESLFDHIYTTQS----DVWSFGVLLWEIVTLGGNPYPGIAPERLFNL 241
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
Y E+P E C EEM Y L L C P RP+ ++
Sbjct: 242 LKTGYRMERP----------ENCS-EEM---YNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 4e-14
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 26/228 (11%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
I + + +G G G V G+ VA+K+I L K E+++L +
Sbjct: 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL 66
Query: 749 RHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
RH NI+ L IS V E + L R L R Q+ L+
Sbjct: 67 RHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSRPL-----EKQFIQYFLY----- 115
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
QI +GL Y+H + ++HRD+K SNIL++ KI DFGLA++ + M+
Sbjct: 116 QI----LRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI-----QDPQMT 163
Query: 868 AVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ Y APE T K + ++DI+S G + E++ GK G +H
Sbjct: 164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH 211
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSI 306
L L+ L G IP+ + L +L + L N + G IP S+ ++ L +DLS N+ GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIP 338
PE G+L +L++L L N LSG VPA++G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 5e-14
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 31/292 (10%)
Query: 699 IGSGGSGQVYRIDINGAGE-------FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RH 750
+G G GQV R + G + VAVK + +N K + I+E+E++ I +H
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKH 77
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQHVLHWPTRL 807
NI+ L + E ++ EY +L +L R+ + V + L + +
Sbjct: 78 KNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLV 137
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
A A+G+ Y+ + + IHRD+ + N+L+ + KIADFGLA+ + S
Sbjct: 138 SCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEWAWRHYA 926
+ APE + + D++SFG+++ E+ T + Y G L + +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+KP C E +Y L C +P+ RP+ K++++ L +
Sbjct: 255 MDKP----------SNCTHE----LYMLMRECWHAVPTQRPTFKQLVEALDK 292
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 5e-14
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 28/213 (13%)
Query: 699 IGSGGSGQVYRI-DINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL---GTIRHANIV 754
IG G G+V++ D+ G FVA+KR+ + + + I E+ +L T H N+V
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67
Query: 755 KLW--CCISS---ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+L+ C +S E LV+E+++ Q L +L V T +
Sbjct: 68 RLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE-----------TIKDM 115
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+GL ++H + +++HRD+K NIL+ S + K+ADFGLA++ + Q +++V
Sbjct: 116 MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSV 169
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902
+ Y APE + +D++S G + E+
Sbjct: 170 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 73.6 bits (180), Expect = 5e-14
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHAN 752
T IG G SG V+ G+ VA+K+I L ++ +KE I EI ++ +++ N
Sbjct: 22 TRYEKIGQGASGTVFTAIDVATGQEVAIKQI----NLQKQPKKELIINEILVMKELKNPN 77
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV + +V EY+ SL + V + + +
Sbjct: 78 IVNFLDSFLVGDELFVVMEYLAGGSL--------------TDVVTETCMDEAQIAAVCRE 123
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL-AKMLAKQGEPHTMSAVAG 871
Q L ++H + Q+IHRD+KS N+LL + K+ DFG A++ +Q + TM G
Sbjct: 124 CLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTM---VG 177
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + APE K+DI+S G++ +E+V G+
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 6e-14
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIA--EIEILGTIRH 750
IG G G V++ G+ VA+K+ +E E IA EI +L ++H
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKF---------VESEDDPVIKKIALREIRMLKQLKH 59
Query: 751 ANIVKLWCCISSENSKL-LVYEYMEN---QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
N+V L + KL LV+EY ++ L++ G L+ + W T
Sbjct: 60 PNLVNL-IEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKK--------IIWQT- 109
Query: 807 LQIAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
Q + + H H+C IHRDVK NIL+ + + K+ DFG A++L G+ +T
Sbjct: 110 -------LQAVNFCHKHNC----IHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158
Query: 866 MSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTG 905
VA + Y APE T+ +D+++ G V EL+TG
Sbjct: 159 -DYVATRW-YRAPELLVGDTQYGPPVDVWAIGCVFAELLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 6e-14
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G+G G+V+ + + + A+K + + K E+ E +L + H I++L+
Sbjct: 8 TVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF 67
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ ++ EY+ L +L R S S+ L + + + A+
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTG-----LFYASEIVCALE----- 115
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H + +I++RD+K NILLD E K+ DFG AK L + T+ G+ Y A
Sbjct: 116 -YLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--TWTL---CGTPEYLA 166
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
PE + N+ +D ++ G+++ E++ G + D
Sbjct: 167 PEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 7e-14
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR--IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
S+ ++G+G G++ R + + E VA+ + Q+ F+AE LG
Sbjct: 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRG--FLAEALTLGQ 62
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H+NIV+L I+ N+ ++V EYM N +LD +L + LV+G +
Sbjct: 63 FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQ------------LM 110
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+ G A G+ Y+ +H+ + + +L++S+ KI+ F + +
Sbjct: 111 GMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFR-------RLQEDKSE 160
Query: 868 AVAGSFG------YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
A+ + + APE + D++SFG+V+ E+++ E Y W
Sbjct: 161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPY---------WD 211
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + A++ G P +++L L C RP ++ IL +
Sbjct: 212 MSG----QDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 7e-14
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 670 DPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK 729
D ++WKL+ F ++G T +G+G G+V G GE+ A+K +
Sbjct: 11 DTSSWKLSDF-EMGET-------------LGTGSFGRVRIAKHKGTGEYYAIKCLKKREI 56
Query: 730 LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSL 789
L K + E IL + H IV + C EN + E++ L + H RK
Sbjct: 57 LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGEL--FTHLRKAG- 113
Query: 790 VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKI 848
+P + A L + + H II+RD+K N+LLD++ K+
Sbjct: 114 ------------RFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKV 159
Query: 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
DFG AK + P + G+ Y APE + + +D ++ GV+L E + G
Sbjct: 160 TDFGFAKKV-----PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211
|
Length = 329 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 8e-14
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IGSG G V +G+ VA+K+I + + L K + E++IL +H NI+ +
Sbjct: 13 IGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPT-LAKRTLRELKILRHFKHDNIIAIRD 71
Query: 759 CISSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ + +V + ME+ L +H S +H+ ++ +L
Sbjct: 72 ILRPPGADFKDVYVVMDLMES-DLHHIIH-------SDQPLTEEHIRYFLYQL------L 117
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT--MSAVAGS 872
+GL Y+H +IHRD+K SN+L++ + + +I DFG+A+ L+ H M+ +
Sbjct: 118 RGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVAT 174
Query: 873 FGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGKE 907
Y APE YTT ID++S G + E++ ++
Sbjct: 175 RWYRAPELLLSLPEYTT----AIDMWSVGCIFAEMLGRRQ 210
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 9e-14
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLW 757
+G G G V ++ G +AVKRI +N + +K + +++I + ++ V +
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRAT--VNSQEQKRLLMDLDISMRSVDCPYTVTFY 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL--QIAIGAAQ 815
+ E + E M+ SLD++ V+ L P + +IA+ +
Sbjct: 67 GALFREGDVWICMEVMDT-SLDKFY-----------KKVYDKGLTIPEDILGKIAVSIVK 114
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG----LAKMLAKQGEPHTMSAVAG 871
L Y+H +IHRDVK SN+L++ + K+ DFG L +AK T+ AG
Sbjct: 115 ALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK-----TID--AG 165
Query: 872 SFGYFAPEYAYTTKVNE---------KIDIYSFGVVLLELVTGK 906
Y APE ++N K D++S G+ ++EL TG+
Sbjct: 166 CKPYMAPE-----RINPELNQKGYDVKSDVWSLGITMIELATGR 204
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 9e-14
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF--IAEIEILGTIRHANIVKL 756
+G G VY+ G+ VA+K I +L + F I E +L ++HANIV L
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEI----RLEHEEGAPFTAIREASLLKDLKHANIVTL 68
Query: 757 WCCISSENSKLLVYEYMEN---QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
I ++ + LV+EY++ Q +D G G S+H L L
Sbjct: 69 HDIIHTKKTLTLVFEYLDTDLKQYMDD--CG-------GGLSMHNVRLFLFQLL------ 113
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+GL Y H +++HRD+K N+L+ + K+ADFGLA+ AK T S +
Sbjct: 114 -RGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR--AKSVPSKTYSNEVVTL 167
Query: 874 GYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTG 905
Y P+ Y+T +D++ G + E+ TG
Sbjct: 168 WYRPPDVLLGSTEYST----SLDMWGVGCIFYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 9e-14
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 29/212 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G V ++ +G +A K I + ++ + + I E+++L IV +
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLI--HLEIKPAIRNQIIRELKVLHECNSPYIVGFYG 66
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
S+ + E+M+ SLD+ L R + +++L +I+I +GL
Sbjct: 67 AFYSDGEISICMEHMDGGSLDQVLKKAGR--------IPENILG-----KISIAVLRGLT 113
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF----G 874
Y+ +I+HRDVK SNIL++S + K+ DFG++ L + ++A SF
Sbjct: 114 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--------IDSMANSFVGTRS 163
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y +PE T + DI+S G+ L+E+ G+
Sbjct: 164 YMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 9e-14
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA---EIEILGTIRHANIV 754
L+G G G+VY G +A K++ + + + + KE A EI++L ++H IV
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPE-SPETSKEVSALECEIQLLKNLQHERIV 67
Query: 755 KLWCCISSENSKLLV--YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + C+ K L EYM S+ + + ++ + V TR QI
Sbjct: 68 QYYGCLRDRAEKTLTIFMEYMPGGSV--------KDQLKAYGALTESVTRKYTR-QIL-- 116
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAG 871
+G+ Y+H + I+HRD+K +NIL DS K+ DFG +K L T + +V G
Sbjct: 117 --EGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTG 171
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + +PE K D++S G ++E++T K
Sbjct: 172 TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 1e-13
Identities = 61/245 (24%), Positives = 91/245 (37%), Gaps = 63/245 (25%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK---LNQKLEKEFIAEIEILGTIRHANIV 754
+IG G G+V+ + G+ A+K + RK + + AE +IL IV
Sbjct: 8 VIGRGAFGEVWLVRDKDTGQVYAMKVL---RKSDMIKRNQIAHVRAERDILADADSPWIV 64
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL--HWPTRLQI--- 809
KL+ E LV EYM L L + + V R I
Sbjct: 65 KLYYSFQDEEHLYLVMEYMPGGDLMNLL-------------IRKDVFPEET-ARFYIAEL 110
Query: 810 --AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
A+ + L + IHRD+K NIL+D++ K+ADFGL K + K +
Sbjct: 111 VLALDSVHKLGF---------IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYL 161
Query: 868 ---------------------------AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLL 900
+ G+ Y APE T + D +S GV+L
Sbjct: 162 NDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY 221
Query: 901 ELVTG 905
E++ G
Sbjct: 222 EMLYG 226
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAE-------------IEIL 745
+G G G+V + GE A+K L+K I E
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIK----------ALKKGDIIARDEVESLMCEKRIFETA 56
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+ RH +V L+ C +E+ V EY D +H +H V P
Sbjct: 57 NSERHPFLVNLFACFQTEDHVCFVMEYAAGG--DLMMH------------IHTDVFSEPR 102
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
+ A GL Y+H + +I++RD+K N+LLD+E KIADFGL K G
Sbjct: 103 AVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCK--EGMGFGDR 157
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
S G+ + APE T +D + GV++ E++ G+ GD+
Sbjct: 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 2e-13
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG G+V + G+ A K++ R +K E+ + E +IL + IV L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL----QIAIGAA 814
+++ LV M L H+ + + AA
Sbjct: 61 AFETKDDLCLVMTLMNGGDL------------------KYHIYNVGEPGFPEARAIFYAA 102
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q +C + H +I++RD+K N+LLD +I+D GLA L + AG+ G
Sbjct: 103 QIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIK---GRAGTPG 159
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE + +D ++ G L E++ G+
Sbjct: 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-13
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 44/285 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G+V+ + VAVK L L+ +F+ E IL H NIV+L
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ + +V E ++ +L + L +Q+ AA G+
Sbjct: 61 VCTQKQPIYIVMELVQGGDFLTFLR---------TEGPR---LKVKELIQMVENAAAGME 108
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG----SFG 874
Y+ IHRD+ + N L+ + KI+DFG ++++ E ++ G
Sbjct: 109 YLESKHC---IHRDLAARNCLVTEKNVLKISDFG----MSREEEDGVYASTGGMKQIPVK 161
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLE---LVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ APE + + + D++SFG++L E L AN ++ T
Sbjct: 162 WTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTR--------------- 206
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+A+++G+ PC VYRL C P RPS V Q L
Sbjct: 207 -EAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 2e-13
Identities = 81/296 (27%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 693 LTESNLIGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-R 749
+ ++IG G GQV R I +G A+K + N ++F E+E+L +
Sbjct: 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND--HRDFAGELEVLCKLGH 61
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH----VLHWPT 805
H NI+ L + + EY +L +L + R L + + +H L
Sbjct: 62 HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLR-KSRVLETDPAFAKEHGTASTLTSQQ 120
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
LQ A A G M + Q IHRD+ + N+L+ +KIADFGL++ GE
Sbjct: 121 LLQFASDVATG---MQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR-----GEEVY 172
Query: 866 MSAVAGSFG--YFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922
+ G + A E + K D++SFGV+L E+V+ G G L E
Sbjct: 173 VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP 232
Query: 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV-LQILR 977
+ Y EKP C E VY L C P RP ++ +Q+ R
Sbjct: 233 QGYRMEKP----------RNCDDE----VYELMRQCWRDRPYERPPFAQISVQLSR 274
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 2e-13
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G G VY+ VA+K I +LE E I E+ +L ++HAN
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEI--------RLEHEEGAPCTAIREVSLLKDLKHAN 65
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV L I +E S LV+EY LD+ L K+ L +S++ H +
Sbjct: 66 IVTLHDIIHTEKSLTLVFEY-----LDKDL---KQYLDDCGNSINMHNVKL-----FLFQ 112
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL Y H +++HRD+K N+L++ + K+ADFGLA+ AK T S +
Sbjct: 113 LLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYSNEVVT 167
Query: 873 FGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
Y P+ +T + +ID++ G + E+ TG+
Sbjct: 168 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 2e-13
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G G V++ VA+K I +LE E I E+ +L ++HAN
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEI--------RLEHEEGAPCTAIREVSLLKNLKHAN 64
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV L I +E LV+EY+++ L ++L S+H + L
Sbjct: 65 IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDN-----CGNLMSMHNVKIFMFQLL----- 113
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL Y H +I+HRD+K N+L++ + + K+ADFGLA+ AK T S +
Sbjct: 114 --RGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLAR--AKSVPTKTYSNEVVT 166
Query: 873 FGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
Y P+ +T+ + ID++ G +L E+ TG+
Sbjct: 167 LWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 3e-13
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G G V GE VA+K+I N+ + + EI++L +RH +IV++
Sbjct: 7 VIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDATRILREIKLLRLLRHPDIVEIK 65
Query: 758 CCISSENSK-----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + + +V+E ME+ LH ++ + HQ L+ R
Sbjct: 66 HIMLPPSRREFKDIYVVFELMESD-----LHQVIKANDDLTPEHHQFFLYQLLR------ 114
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM--SAVA 870
L Y+H T + HRD+K NIL +++ K KI DFGLA++ VA
Sbjct: 115 ---ALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 168
Query: 871 GSFGYFAPEY--AYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE ++ +K IDI+S G + E++TGK
Sbjct: 169 TRW-YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 3e-13
Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 29/282 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +VYR + VA+K++ ++ K ++ + EI++L + H N++K
Sbjct: 10 IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD 69
Query: 759 CISSENSKLLVYEYMENQSLDRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+N +V E + L + + + +K+ + +V W +Q+ +
Sbjct: 70 SFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTV------WKYFVQLC----SAV 119
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
+MH + +++HRD+K +N+ + + K+ D GL + + + ++ G+ Y +
Sbjct: 120 EHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMS 174
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDK 937
PE + N K DI+S G +L E+ + YGD+ + + +++
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS------------LCQKIEQ 222
Query: 938 GIAEPCYLEEMTTVYR-LALICTSTLPSSRPSMKEVLQILRR 978
P E + R L +C P RP + V QI ++
Sbjct: 223 CDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 3e-13
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 28/297 (9%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAG----EFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
LS++ +G G++Y+ + G + VA+K + + N + EF E ++
Sbjct: 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLM 61
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS----VHQHVL 801
+ H NIV L ++ E +++EY+ L +L R G SS + L
Sbjct: 62 AELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSL 121
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
L IAI A G+ Y+ + +H+D+ + NIL+ + KI+D GL++ +
Sbjct: 122 DHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSAD 178
Query: 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 920
+ PE K + DI+SFGVVL E+ + G + YG + + E
Sbjct: 179 YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE- 237
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ K PC + +Y L C PS RP K++ LR
Sbjct: 238 -------------MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 3e-13
Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 697 NLIGSGGSGQVY--RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANI 753
++IG G GQV RI +G A+KR+ ++ ++F E+E+L + H NI
Sbjct: 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNI 70
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLV-----------SGSSSVHQHVLH 802
+ L L EY + +L +L RK ++ + S+ Q +LH
Sbjct: 71 INLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETDPAFAIANSTASTLSSQQLLH 128
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
+ A A+G+ Y+ Q IHRD+ + NIL+ + AKIADFGL++ G+
Sbjct: 129 F------AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQ 174
Query: 863 PHTMSAVAGSFG--YFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAE 919
+ G + A E + D++S+GV+L E+V+ G G L E
Sbjct: 175 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 234
Query: 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ Y EKP+ C E VY L C P RPS ++L L R
Sbjct: 235 KLPQGYRLEKPLN----------CDDE----VYDLMRQCWREKPYERPSFAQILVSLNR 279
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 3e-13
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 41/217 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+VY+ G A K I K ++LE +++ EIEIL T H IVKL
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELE-DYMVEIEILATCNHPYIVKLLG 76
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ ++ E+ ++D + R L T QI + Q L
Sbjct: 77 AFYWDGKLWIMIEFCPGGAVDAIMLELDRGL---------------TEPQIQVICRQMLE 121
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA----KMLAKQ----GEPHTMSAVA 870
+ + + +IIHRD+K+ N+LL + K+ADFG++ K L ++ G P+ M
Sbjct: 122 ALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWM---- 177
Query: 871 GSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLEL 902
APE T + K DI+S G+ L+E+
Sbjct: 178 ------APEVVMCETMKDTPYDYKADIWSLGITLIEM 208
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 4e-13
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG G+V + + G+ A K++ R + EK + E EIL + IV L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR----LQIAIGAA 814
S+ LV SL++G + H+ + R ++ +A
Sbjct: 61 AFESKTHLCLVM-----------------SLMNGGD-LKYHIYNVGERGLEMERVIHYSA 102
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q C + H + I++RD+K N+LLD + +++D GLA L K G+ T AG+ G
Sbjct: 103 QITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVEL-KDGKTITQR--AGTNG 159
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE + +D ++ G + E+V G+
Sbjct: 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 4e-13
Identities = 72/298 (24%), Positives = 115/298 (38%), Gaps = 42/298 (14%)
Query: 692 SLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
S+T +G G G+VY +G + V +++ E +F+ E I+
Sbjct: 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF 66
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H NIV+L + ++ E M L +L + SS + +L
Sbjct: 67 NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLF------ 120
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK---AKIADFGLAKML------AK 859
A A+G Y+ IHRD+ + N LL + AKIADFG+A+ + K
Sbjct: 121 CARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK 177
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLA 918
G M + + PE K D++SFGV+L E+ + Y G + +
Sbjct: 178 GGR--AMLPIK----WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM 231
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
E+ + P KG P VYR+ C P RP+ +L+ +
Sbjct: 232 EFVTGGGRLDPP------KGCPGP--------VYRIMTDCWQHTPEDRPNFATILERI 275
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 5e-13
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q L +HH + +IHRD+KS+NILL S K+ DFG +KM A G+
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPY 210
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE-----HTSLAEWAWRHYAEEK 929
Y APE ++K D++S GV+L EL+T K G+ H +LA
Sbjct: 211 YVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-------GRYD 263
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
P+ ++ EM + L S+ P RPS ++L
Sbjct: 264 PLPPSISP---------EMQEIVTALL---SSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 6e-13
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEF-IAEIEILGTI-RHANI 753
++G G G+V ++ G E AVK + +K + Q + E + E +L +H +
Sbjct: 2 VLGKGSFGKVLLAELKGTDELYAVKVL---KKDVILQDDDVECTMTEKRVLALAGKHPFL 58
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+L C +++ V EY+ L + P A
Sbjct: 59 TQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ-------------RSGRFDEPRARFYAAEI 105
Query: 814 AQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK--MLAKQGEPHTMSAVA 870
GL ++H II+RD+K N+LLDSE KIADFG+ K +L T S
Sbjct: 106 VLGLQFLHERG----IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV----TTSTFC 157
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
G+ Y APE +D ++ GV+L E++ G+ GD+ L
Sbjct: 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL 204
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 6e-13
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
IG G SG VY IDI G+ VA+K++ L Q+ +KE I EI ++ ++ NIV
Sbjct: 27 IGQGASGTVYTAIDI-ATGQEVAIKQM----NLQQQPKKELIINEILVMRENKNPNIVNY 81
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ +V EY+ SL + V + + + Q
Sbjct: 82 LDSYLVGDELWVVMEYLAGGSL--------------TDVVTETCMDEGQIAAVCRECLQA 127
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL-AKMLAKQGEPHTMSAVAGSFGY 875
L ++H + Q+IHRD+KS NILL + K+ DFG A++ +Q + TM G+ +
Sbjct: 128 LDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYW 181
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE K+DI+S G++ +E+V G+
Sbjct: 182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 7e-13
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +G V +G VAVK + + RK Q+ + E+ I+ +H N+V+++
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMM-DLRK--QQRRELLFNEVVIMRDYQHQNVVEMYK 85
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
++ E+++ +L + V Q L+ + Q LC
Sbjct: 86 SYLVGEELWVLMEFLQGGAL--------------TDIVSQTRLNEEQIATVCESVLQALC 131
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H + +IHRD+KS +ILL + + K++DFG ++K P S V + + AP
Sbjct: 132 YLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKSLVGTPY-WMAP 186
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
E T ++DI+S G++++E+V G+ + D
Sbjct: 187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 7e-13
Identities = 73/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 699 IGSGGSGQVY----RIDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+G G G VY R I G E VAVK + + L +++E F+ E ++ ++
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 71
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL-HWPTRLQIAIG 812
V+L +S L+V E M + L +L RSL + + +Q+A
Sbjct: 72 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 127
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A G+ Y++ + +HRD+ + N ++ +F KI DFG+ + + +
Sbjct: 128 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 184
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
+ APE D++SFGVVL E+ TSLAE ++ + E+ +
Sbjct: 185 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI------------TSLAEQPYQGLSNEQVLK 232
Query: 933 DALDKG-IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+D G + +P E V L +C P RP+ E++ +L+
Sbjct: 233 FVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 7e-13
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +G V + +G+ VAVK++ + RK Q+ + E+ I+ +H N+V+++
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKM-DLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ +V E++E +L +V+ + + + + + + L
Sbjct: 85 SYLVGDELWVVMEFLEGGALT--------DIVTHTRMNEEQIA------AVCLAVLKALS 130
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
+H +IHRD+KS +ILL + + K++DFG ++K E ++ G+ + AP
Sbjct: 131 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKSLVGTPYWMAP 185
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
E ++DI+S G++++E+V G E Y +E
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDG-EPPYFNE 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 8e-13
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 21/211 (9%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G VY+ G+ VA+K I + K + + I E +L ++HANIV L
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVI--SMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
I ++ + V+EYM L +++ H LH +GL
Sbjct: 71 IIHTKETLTFVFEYMHT-DLAQYM------------IQHPGGLHPYNVRLFMFQLLRGLA 117
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H I+HRD+K N+L+ + K+ADFGLA+ AK T S+ + Y P
Sbjct: 118 YIHGQ---HILHRDLKPQNLLISYLGELKLADFGLAR--AKSIPSQTYSSEVVTLWYRPP 172
Query: 879 EYAY-TTKVNEKIDIYSFGVVLLELVTGKEA 908
+ T + +DI+ G + +E++ G+ A
Sbjct: 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPA 203
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 8e-13
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G+G G+V+ N + VAVK + K + F+AE ++ T++H
Sbjct: 6 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTM----KPGSMSVEAFLAEANVMKTLQH 60
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWL---HGRKRSLVSGSSSVHQHVLHWPTRL 807
+VKL ++ E ++ E+M SL +L G K+ L P +
Sbjct: 61 DKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPL--------------PKLI 105
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+ A+G+ ++ IHRD++++NIL+ + KIADFGLA+++ E + +
Sbjct: 106 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYT 158
Query: 868 AVAGS---FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
A G+ + APE K D++SFG++L+E+VT Y S E
Sbjct: 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY--PGMSNPE----- 211
Query: 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ AL++G P +Y + + C P RP+ + + +L
Sbjct: 212 ------VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 8e-13
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAE--------IE----IL 745
++G G G+V ++ G EF A+K L+K+ + E +E L
Sbjct: 2 VLGKGSFGKVMLAELKGTNEFFAIK----------ALKKDVVLEDDDVECTMVERRVLAL 51
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
H + L+C ++ V EY+ L + R + + ++
Sbjct: 52 AW-EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEII---- 106
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
GL ++H II+RD+K N+LLD + KIADFG+ K GE
Sbjct: 107 ---------CGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCK-ENMNGE-GK 152
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
S G+ Y APE K NE +D +SFGV+L E++ G+ +G++ L
Sbjct: 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL 204
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 8e-13
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +G V G+ VAVK++ + RK Q+ + E+ I+ H N+V ++
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKM-DLRK--QQRRELLFNEVVIMRDYHHENVVDMYN 86
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
+ +V E++E +L +V+ + + + + + + L
Sbjct: 87 SYLVGDELWVVMEFLEGGALT--------DIVTHTRMNEEQIA------TVCLSVLRALS 132
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H +IHRD+KS +ILL S+ + K++DFG ++K E ++ G+ + AP
Sbjct: 133 YLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKSLVGTPYWMAP 187
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938
E ++DI+S G++++E++ G E Y +E A + I D L
Sbjct: 188 EVISRLPYGTEVDIWSLGIMVIEMIDG-EPPYFNEPPLQA---------MRRIRDNLPPR 237
Query: 939 IAEPCYLEEMTTVYRLAL-ICTSTLPSSRPSMKEVLQ 974
+ + ++++V R L + PS R + +E+LQ
Sbjct: 238 VKD---SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 9e-13
Identities = 78/292 (26%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 697 NLIGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANI 753
++IG G GQV + I +G A+KR+ + ++F E+E+L + H NI
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKLGHHPNI 58
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH----VLHWPTRLQI 809
+ L L EY + +L +L + R L + + + L L
Sbjct: 59 INLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQLLHF 117
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A A+G+ Y+ Q IHRD+ + NIL+ + AKIADFGL++ G+ +
Sbjct: 118 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKT 169
Query: 870 AGSFG--YFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926
G + A E + D++S+GV+L E+V+ G G L E + Y
Sbjct: 170 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 229
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV-LQILR 977
EKP C E VY L C P RPS ++ + + R
Sbjct: 230 LEKP----------LNCDDE----VYDLMRQCWREKPYERPSFAQILVSLNR 267
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 1e-12
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA---EIEILGTIRHANIV 754
L+G G G+VY G +AVK++ + + + + KE A EI++L + H IV
Sbjct: 9 LLGQGAFGRVYLCYDADTGRELAVKQVQFDPE-SPETSKEVNALECEIQLLKNLLHERIV 67
Query: 755 KLWCCISSENSKLL--VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + C+ + L E+M S+ + + ++ ++V TR QI
Sbjct: 68 QYYGCLRDPMERTLSIFMEHMPGGSI--------KDQLKSYGALTENVTRKYTR-QIL-- 116
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAG 871
+G+ Y+H + I+HRD+K +NIL DS K+ DFG +K L T M +V G
Sbjct: 117 --EGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTG 171
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + +PE K DI+S G ++E++T K
Sbjct: 172 TPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 1e-12
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G V+++ +G +A K I + ++ + + I E+++L IV +
Sbjct: 13 LGAGNGGVVFKVSHKPSGLIMARKLI--HLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 70
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
S+ + E+M+ SLD+ L + + + +L +++I +GL
Sbjct: 71 AFYSDGEISICMEHMDGGSLDQVL--------KKAGRIPEQILG-----KVSIAVIKGLT 117
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+ +I+HRDVK SNIL++S + K+ DFG++ L ++ G+ Y +P
Sbjct: 118 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 171
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGK 906
E T + + DI+S G+ L+E+ G+
Sbjct: 172 ERLQGTHYSVQSDIWSMGLSLVEMAIGR 199
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 1e-12
Identities = 68/246 (27%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 681 QLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA 740
Q+ + +L + IGSG G V G VAVK++ + NQ K
Sbjct: 11 QVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYR 69
Query: 741 EIEILGTIRHANIVKLWCCISSENS------KLLVYEYMENQSLDRWLHGRKRSLVSGSS 794
E+ +L + H NI+ L + + S LV E M+ +
Sbjct: 70 ELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD---------------ANLCQ 114
Query: 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+H + H R+ + Q LC + H + IIHRD+K SNI++ S+ KI DFGLA
Sbjct: 115 VIHMELDH--ERMSYLL--YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170
Query: 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ M+ + Y APE E +DI+S G ++ ELV G G +H
Sbjct: 171 RTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH 227
Query: 915 TSLAEW 920
+ +W
Sbjct: 228 --IDQW 231
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVK--RIWNNRKLNQKLEKEFIAEIEILGTIR---HANI 753
IG G G VY+ +G FVA+K R+ N L + E+ +L + H NI
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNE---DGLPLSTVREVALLKRLEAFDHPNI 64
Query: 754 VKLW-CCISS----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
V+L C +S E LV+E+++ Q L +L V L T
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYL-----------DKVPPPGLPAETIKD 112
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
+ +GL ++H +C I+HRD+K NIL+ S + K+ADFGLA++ + Q ++
Sbjct: 113 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQ---MALTP 166
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
V + Y APE + +D++S G + E+ K G+
Sbjct: 167 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 1e-12
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 33/213 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+VY+ G A K I + K ++LE +++ EI+IL + H NIVKL
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVI--DTKSEEELE-DYMVEIDILASCDHPNIVKLLD 69
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ--- 815
EN+ ++ E+ ++D + +R L T QI + Q
Sbjct: 70 AFYYENNLWILIEFCAGGAVDAVMLELERPL---------------TEPQIRVVCKQTLE 114
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFG 874
L Y+H + +IIHRD+K+ NIL + K+ADFG++ AK + G+
Sbjct: 115 ALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPY 168
Query: 875 YFAPEYAY--TTK---VNEKIDIYSFGVVLLEL 902
+ APE T+K + K D++S G+ L+E+
Sbjct: 169 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--------------LNQKLEKEFIAEIEI 744
+G G G+V+ ++ + ++ +N RK N+ +F+ E++I
Sbjct: 13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKI 72
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQH--- 799
L ++ NI++L E+ ++ EYMEN L+++L H +G+ +V
Sbjct: 73 LSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCL 132
Query: 800 -VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858
+ + + L +A+ A G+ Y+ + +HRD+ + N L+ KIADFG+++ L
Sbjct: 133 PAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY 189
Query: 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLE-LVTGKEANYGD 912
+ A E K D+++FGV L E L+ KE YG+
Sbjct: 190 AGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 67/241 (27%), Positives = 98/241 (40%), Gaps = 65/241 (26%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF-----IAEIEILGTIRHANI 753
+G G G+VY+ G VA+K+I EK+ + EI+IL ++H N+
Sbjct: 16 LGEGTFGEVYKARQIKTGRVVALKKIL------MHNEKDGFPITALREIKILKKLKHPNV 69
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH----VLHWP----T 805
V L + + E + RKR V + H +L P T
Sbjct: 70 VPL-----ID----MAVERPDK-------SKRKRGSVYMVTPYMDHDLSGLLENPSVKLT 113
Query: 806 RLQIAIGAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
QI Q G+ Y+H + I+HRD+K++NIL+D++ KIADFGLA+
Sbjct: 114 ESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYD---G 167
Query: 863 PHTMSAVAGSFG------------YFAPEYA-----YTTKVNEKIDIYSFGVVLLELVTG 905
P G G Y PE YTT +DI+ G V E+ T
Sbjct: 168 PPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTT----AVDIWGIGCVFAEMFTR 223
Query: 906 K 906
+
Sbjct: 224 R 224
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 2e-12
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 54/248 (21%)
Query: 681 QLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-F- 738
Q F + +S + IG G G+V++ + VA+K++ EKE F
Sbjct: 2 QYEFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMEN------EKEGFP 55
Query: 739 ---IAEIEILGTIRHANIVKLWCCISSENSK--------LLVYEYME--------NQSLD 779
+ EI+IL ++H N+V L ++ + LV+E+ E N+++
Sbjct: 56 ITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK 115
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
L K+ V + +L GL Y+H +I+HRD+K++NIL
Sbjct: 116 FTLSEIKK--------VMKMLL-------------NGLYYIH---RNKILHRDMKAANIL 151
Query: 840 LDSEFKAKIADFGLAK--MLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFG 896
+ + K+ADFGLA+ L+K +P+ + + Y PE + ID++ G
Sbjct: 152 ITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG 211
Query: 897 VVLLELVT 904
++ E+ T
Sbjct: 212 CIMAEMWT 219
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 2e-12
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 50/237 (21%)
Query: 699 IGSGGSGQVY--RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G+VY + G+ A+K+ +++ + + EI +L ++H N+V L
Sbjct: 8 IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67
Query: 757 W-CCISSENSKL-LVYEYMENQSLDRW----LHGRKRSLVSGSSSVHQHVLH---WPTRL 807
+ + + L+++Y E+ D W H + + + S+ ++ W
Sbjct: 68 VEVFLEHADKSVYLLFDYAEH---DLWQIIKFHRQAKRV-----SIPPSMVKSLLW---- 115
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEP 863
QI G+ Y+H + ++HRD+K +NIL+ E KI D GLA++ +P
Sbjct: 116 QIL----NGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP 168
Query: 864 -HTMSAVAGSFGYFAPEYA-----YTTKVNEKIDIYSFGVVLLELVT------GKEA 908
+ V + Y APE YT + IDI++ G + EL+T G+EA
Sbjct: 169 LADLDPVVVTIWYRAPELLLGARHYT----KAIDIWAIGCIFAELLTLEPIFKGREA 221
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-12
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 279 LSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
L G IP+ + L L I+LS N++ G+IP G + +L++L L N +G +P S+G++
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 338 PALKKFKVFNNSLSGVLPPEIG---LHSALEGF 367
+L+ + NSLSG +P +G LH A F
Sbjct: 490 TSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522
|
Length = 623 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 68.2 bits (166), Expect = 3e-12
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLW 757
IG G SG VY G+ VA++++ L Q+ +KE I EI ++ ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V EY+ SL + V + + + Q L
Sbjct: 84 DSYLVGDELWVVMEYLAGGSL--------------TDVVTETCMDEGQIAAVCRECLQAL 129
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
++H + Q+IHRD+KS NILL + K+ DFG + E S + G+ + A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMA 184
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE K+DI+S G++ +E++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 4e-12
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
L L G IP+DI ++ LQ I+L GN+ G+IP S+G ++ L+ L L N FNG+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFG 216
P+ +G L++L +L L N N +P G
Sbjct: 483 PESLGQLTSLRILNL--NGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 4e-12
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 30/298 (10%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAG-----EFVAVKRIWNNRKLNQKLEKEFIAEIEI 744
LS++ +G G+VY+ + G + VA+K + + K L +EF E +
Sbjct: 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKD--KAEGPLREEFKHEAMM 61
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV---L 801
++H NIV L ++ E +++ Y + L +L R GS+ + V L
Sbjct: 62 RSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTL 121
Query: 802 HWPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
+ I A G+ ++ HH ++H+D+ + N+L+ + KI+D GL + +
Sbjct: 122 EPADFVHIVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGLFREVYA 176
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
M + +PE K + DI+S+GVVL E+ + YG +
Sbjct: 177 ADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS-----YGLQ------ 225
Query: 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ Y+ + I ++ + PC + VY L L C + PS RP K++ LR
Sbjct: 226 -PYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 5e-12
Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 62/300 (20%)
Query: 691 SSLTESNLIGSGGSGQV----YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
S LT +GSG G V +R I VA+K I E++FI E +++
Sbjct: 4 SELTFMKELGSGQFGVVHLGKWRAQIK-----VAIKAI----NEGAMSEEDFIEEAKVMM 54
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+ H +V+L+ + + +V E+MEN L +L R+ L + +L
Sbjct: 55 KLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKL-------SKDML----- 102
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
L + +G+ Y+ + IHRD+ + N L+ S K++DFG+ + + +
Sbjct: 103 LSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL---DDEYT 156
Query: 867 SAVAGSF--GYFAPEYAYTTKVNEKIDIYSFGVVLLELVT------GKEANYGDEHTSLA 918
S+ F + PE +K + K D++SFGV++ E+ T K++NY
Sbjct: 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-------- 208
Query: 919 EWAWRHYAEEKPITDALDKG--IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + + +G + P L M TVY + C P RP+ E+L+ +
Sbjct: 209 -----------EVVEMISRGFRLYRP-KLASM-TVYEVMYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 6e-12
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA--EIEILGTIRHANIVKL 756
+G G VY+ G+ VA+K I +L ++ F A E +L ++HANIV L
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVI----RLQEEEGTPFTAIREASLLKGLKHANIVLL 68
Query: 757 WCCISSENSKLLVYEYMEN---QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI-G 812
I ++ + LV+EY+ Q +D+ H LH P +++ +
Sbjct: 69 HDIIHTKETLTLVFEYVHTDLCQYMDK----------------HPGGLH-PENVKLFLFQ 111
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL Y+H I+HRD+K N+L+ + K+ADFGLA+ AK HT S +
Sbjct: 112 LLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLAR--AKSVPSHTYSNEVVT 166
Query: 873 FGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEA 908
Y P+ +T+ + +D++ G + +E++ G A
Sbjct: 167 LWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAA 203
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 6e-12
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 45/233 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-----EIEILGTIRHAN- 752
IG G G+VY+ G+ VA+K K ++++E I EI +L + +
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALK------KTRLEMDEEGIPPTALREISLLQMLSESIY 62
Query: 753 IVKLWCCISSENSK-----LLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPT 805
IV+L E LV+EY++ L +++ +GR + ++ +
Sbjct: 63 IVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMY---- 117
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPH 864
Q+ G A C+ H ++HRD+K N+L+D + KIAD GL + + + +
Sbjct: 118 --QLLKGVAH--CHKH-----GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY 168
Query: 865 TMSAVAGSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
T V + Y APE Y+T V DI+S G + E+ + GD
Sbjct: 169 THEIV--TLWYRAPEVLLGSTHYSTPV----DIWSVGCIFAEMSRKQPLFPGD 215
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 70/222 (31%), Positives = 95/222 (42%), Gaps = 54/222 (24%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIV--- 754
+GSG G VY+ GE AVK I KL + I EI ++ +H NIV
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKII----KLEPGDDFSLIQQEIFMVKECKHCNIVAYF 72
Query: 755 -------KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
KLW C+ EY SL H V+G S L
Sbjct: 73 GSYLSREKLWICM----------EYCGGGSLQDIYH------VTGPLS----------EL 106
Query: 808 QIAI---GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL-AKMLAKQGEP 863
QIA QGL Y+H + +HRD+K +NILL K+ADFG+ AK+ A +
Sbjct: 107 QIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK- 162
Query: 864 HTMSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLLEL 902
+ G+ + APE A K N+ DI++ G+ +EL
Sbjct: 163 --RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 7e-12
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G+V + +G++ A+K + + + + E +L RH + L
Sbjct: 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLK 61
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+++ V EY+ L + H + + S TR A L
Sbjct: 62 YSFQTKDRLCFVMEYVNGGEL--FFHLSRERVFSEDR----------TRFYGA-EIVSAL 108
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG--EPHTMSAVAGSFGY 875
Y+H + +I++RD+K N++LD + KI DFGL K +G + TM G+ Y
Sbjct: 109 DYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCK----EGITDAATMKTFCGTPEY 161
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
APE +D + GVV+ E++ G+ Y +H L E
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 205
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 9e-12
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 45/285 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
++GSG G VY+ GE VA+K + + K KE + E ++ ++ + ++
Sbjct: 14 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVDNPHV 71
Query: 754 VKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+L C++S + L+ + M L ++ K ++ S Q++L+W ++
Sbjct: 72 CRLLGICLTS--TVQLITQLMPFGCLLDYVREHKDNIGS------QYLLNWCVQI----- 118
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A+G+ Y+ +++HRD+ + N+L+ + KI DFGLAK+L + +
Sbjct: 119 -AKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVP 174
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
+ A E + D++S+GV + EL+T Y I+
Sbjct: 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-------------IPASEIS 221
Query: 933 DALDKGIAEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
L+KG P C ++ VY + + C SRP +E++
Sbjct: 222 SILEKGERLPQPPICTID----VYMIMVKCWMIDADSRPKFRELI 262
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 1e-11
Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTIRHANIVKLW 757
IGSG G V G+ VA+K++ +R N K E+ ++ + H NI+ L
Sbjct: 24 IGSGAQGIVCAAYDTVTGQNVAIKKL--SRPFQNVTHAKRAYRELVLMKLVNHKNIIGLL 81
Query: 758 CCISSENS------KLLVYEYME-------NQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ + S LV E M+ LD H R L+
Sbjct: 82 NVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD---HERMSYLLY------------- 125
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
Q LC + H + IIHRD+K SNI++ S+ KI DFGLA+ G
Sbjct: 126 ----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 172
Query: 865 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
M+ + Y APE E +DI+S G ++ E++ G G +H
Sbjct: 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 1e-11
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTIRHANIVKL 756
++G G G+V ++ G GE+ AVK + + L + +E + + + + + L
Sbjct: 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+C ++ V E++ L H + + G +++ + AA+
Sbjct: 62 YCTFQTKEHLFFVMEFLNGGDL--MFHIQDK----GRFDLYRATFY----------AAEI 105
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+C + + II+RD+K N++LD + KIADFG+ K G+ + S G+ Y
Sbjct: 106 VCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENV-FGD-NRASTFCGTPDYI 163
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
APE K +D +SFGV+L E++ G+ +GD+ L E
Sbjct: 164 APEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE 206
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 1e-11
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G +G V+ + + VAVK+I Q + K + EI+I+ + H NIVK++
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSV-KHALREIKIIRRLDHDNIVKVYE 69
Query: 759 CISSENSKL--------------LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ S L +V EYME + G S H + +
Sbjct: 70 VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGP-------LSEEHARLFMY- 121
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEP 863
Q+ +GL Y+H + ++HRD+K +N+ +++E KI DFGLA+++ +P
Sbjct: 122 ---QLL----RGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV----DP 167
Query: 864 HT-----MSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGK 906
H +S + Y +P + + ID+++ G + E++TGK
Sbjct: 168 HYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 1e-11
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLW 757
IG G G+VY++ G AVK + +++++E AE IL ++ H N+VK +
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIE----AEYNILQSLPNHPNVVKFY 85
Query: 758 CCISSENSKL-----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + LV E S+ + G L+ + + ++ + I G
Sbjct: 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKG----LLICGQRLDEAMISY-----ILYG 136
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A GL ++H++ +IIHRDVK +NILL +E K+ DFG++ L S G+
Sbjct: 137 ALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS--VGT 191
Query: 873 FGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTG 905
+ APE Y + + D++S G+ +EL G
Sbjct: 192 PFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 1e-11
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V + G+ A K++ R +K E + E +IL + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLA 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
++++ LV M L ++ H + + AA+
Sbjct: 67 YAYETKDALCLVLTLMNGGDLKFHIY-------------HMGEAGFEEG-RAVFYAAEIC 112
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
C + +I++RD+K NILLD +I+D GLA + E T+ G+ GY A
Sbjct: 113 CGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMA 169
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE + D ++ G +L E++ G+
Sbjct: 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 1e-11
Identities = 68/306 (22%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEF----------------VAVKRIWNNRKLNQKLEK 736
LT +G G G+V+ + G +F VAVK + N+
Sbjct: 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKML--REDANKNARN 64
Query: 737 EFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSS 794
+F+ EI+I+ ++ NI++L + + ++ EYMEN L+++L H + +
Sbjct: 65 DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV 124
Query: 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+ + T + +A A G+ Y+ + +HRD+ + N L+ + KIADFG++
Sbjct: 125 V----TISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMS 177
Query: 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ L + + E K D+++FGV L E++T +
Sbjct: 178 RNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK------- 230
Query: 915 TSLAEWAWRHYAEEKPITDA----LDKG----IAEPCYLEEMTTVYRLALICTSTLPSSR 966
E + ++E+ I + D+G + +P + ++Y+L L C R
Sbjct: 231 ----EQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPD--SLYKLMLSCWRRNAKER 284
Query: 967 PSMKEV 972
PS +E+
Sbjct: 285 PSFQEI 290
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 2e-11
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 28/291 (9%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGE-----FVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+T S +G G G VY G + VA+K + + +++E F+ E ++
Sbjct: 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKE 65
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
++V+L +S L++ E M L +L R + + L +
Sbjct: 66 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVQAPPSLK--KMI 122
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
Q+A A G+ Y++ + + +HRD+ + N ++ +F KI DFG+ + + +
Sbjct: 123 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 179
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ +PE D++SFGVVL E+ T LAE ++ +
Sbjct: 180 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------LAEQPYQGMSN 227
Query: 928 EKPITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
E+ + ++ G+ + P +M ++ L +C P RPS E++ ++
Sbjct: 228 EQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRI---WNNRKLNQKLEKEFIAEIEILGTIRHANIVK 755
+G G G VY++ G +A+K I + K NQ I E++IL IV
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQ-----IIMELDILHKAVSPYIVD 63
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+ E + + EYM+ SLD+ G + + + VL +I +
Sbjct: 64 FYGAFFIEGAVYMCMEYMDAGSLDKLYAGG-----VATEGIPEDVLR-----RITYAVVK 113
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG----LAKMLAKQGEPHTMSAVAG 871
GL ++ + IIHRDVK +N+L++ + K+ DFG L LAK G
Sbjct: 114 GLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN--------IG 163
Query: 872 SFGYFAPEYAYTTKVNEKI------DIYSFGVVLLELVTGK 906
Y APE + N+ D++S G+ +LE+ G+
Sbjct: 164 CQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGR 204
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 2e-11
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 31/292 (10%)
Query: 699 IGSGGSGQVYRIDINGAGE-------FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RH 750
+G G GQV + G + VAVK + ++ +K + I+E+E++ I +H
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKH 83
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRL 807
NI+ L + + ++ EY +L +L R+ + + V + L + +
Sbjct: 84 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
A A+G+ Y+ + + IHRD+ + N+L+ + KIADFGLA+ + +
Sbjct: 144 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEWAWRHYA 926
+ APE + + D++SFGV+L E+ T + Y G L + +
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 260
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+KP C E +Y + C +PS RP+ K++++ L R
Sbjct: 261 MDKPSN----------CTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 298
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG G+V + G+ A K++ R +K + + E IL + IV L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
++ LV M L ++ + + + AQ +
Sbjct: 61 AFQTKTDLCLVMTIMNGGDLRYHIYNVDEE--NPGFPEPRACFY----------TAQIIS 108
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
+ H +II+RD+K N+LLD++ +I+D GLA L K G+ T AG+ G+ AP
Sbjct: 109 GLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVEL-KDGQSKT-KGYAGTPGFMAP 166
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGK 906
E + + +D ++ GV L E++ +
Sbjct: 167 ELLQGEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-11
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H +IIHRDVK+ NI ++ + I D G A+ P + +AG+
Sbjct: 168 EGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF--PVVAPAFL-GLAGTVE 221
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
APE K N K DI+S G+VL E++ + D ++ E+
Sbjct: 222 TNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYV 268
|
Length = 357 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V + G+ A KR+ R +K E + E +IL + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLA 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
++++ LV M L ++ G+ + + AA+ L
Sbjct: 67 YAYETKDALCLVLTIMNGGDLKFHIYNM------GNPGFEEE--------RALFYAAEIL 112
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
C + ++RD+K NILLD +I+D GLA K E ++ G+ GY A
Sbjct: 113 CGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLA---VKIPEGESIRGRVGTVGYMA 169
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE + D + G ++ E++ G+
Sbjct: 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 46/288 (15%)
Query: 699 IGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+GSG G V + + + + VAVK I N + L+ E + E ++ + + IV++
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVK-ILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS-VHQHVLHWPTRLQIAIGAAQ 815
+E S +LV E E L+++L K + VHQ +
Sbjct: 62 IGICEAE-SWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQ--------------VSM 106
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF-- 873
G+ Y+ +HRD+ + N+LL ++ AKI+DFGL+K L E + + G +
Sbjct: 107 GMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD-ENYYKAKTHGKWPV 162
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY----GDEHTSLAEWAWRHYAEEK 929
++APE K + K D++SFGV++ E + + Y G+E T + E R ++
Sbjct: 163 KWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQR 222
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
C E +Y L +C + RP V LR
Sbjct: 223 -------------CPPE----MYDLMKLCWTYGVDERPGFAVVELRLR 253
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 3e-11
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 31/298 (10%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGE-------FVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
LT +G G GQV + G + VAVK + ++ +K + ++E+E++
Sbjct: 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMM 74
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVL 801
I +H NI+ L + + ++ EY +L +L R+ + S + V +
Sbjct: 75 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQM 134
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
+ + A+G+ Y+ + + IHRD+ + N+L+ KIADFGLA+ +
Sbjct: 135 TFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNID 191
Query: 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEW 920
+ + APE + + D++SFGV++ E+ T + Y G L +
Sbjct: 192 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ +KP C E +Y + C +PS RP+ K++++ L R
Sbjct: 252 LKEGHRMDKPAN----------CTNE----LYMMMRDCWHAIPSHRPTFKQLVEDLDR 295
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 3e-11
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 693 LTESN---LIGSGGSGQVYRIDINGAGEFVAVKRI-WNNRKLNQKLEKEFIAEIEILGTI 748
E+ ++G G G VY +A+K I + + Q L +E I + +
Sbjct: 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEE----IALHSYL 62
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
+H NIV+ S + E + SL L + G ++ + + T+ Q
Sbjct: 63 KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK-----WGPLKDNEQTIIFYTK-Q 116
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIADFGLAKMLAKQGEPHTMS 867
I +GL Y+H + QI+HRD+K N+L+++ KI+DFG +K LA P T
Sbjct: 117 IL----EGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-NPCT-E 167
Query: 868 AVAGSFGYFAPEY------AYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE Y DI+S G ++E+ TGK
Sbjct: 168 TFTGTLQYMAPEVIDKGPRGYGAPA----DIWSLGCTIVEMATGK 208
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 4e-11
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL-GTIRHANIVKL 756
+IG G G+V G F AVK + L +K + +AE +L ++H +V L
Sbjct: 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+ V +Y+ L + H R+R + P A A
Sbjct: 62 HYSFQTAEKLYFVLDYVNGGEL--FFHLQRERCFLE------------PRARFYAAEVAS 107
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG-EPH-TMSAVAGSF 873
+ Y+H + II+RD+K NILLDS+ + DFG L K+G EP T S G+
Sbjct: 108 AIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFG----LCKEGVEPEETTSTFCGTP 160
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE + +D + G VL E++ G
Sbjct: 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G G+V + G+ +K++ N R +++ K E ++L ++H NIV
Sbjct: 8 VGKGSYGEVSLVRHRTDGKQYVIKKL-NLRNASRRERKAAEQEAQLLSQLKHPNIVAYRE 66
Query: 759 CISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
E+ L +V + E L L +K L+ V+ W +QIA+ L
Sbjct: 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLL-----PENQVVEW--FVQIAMA----L 115
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y+H I+HRD+K+ N+ L K+ D G+A++L Q + S + G+ Y +
Sbjct: 116 QYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMS 170
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
PE N K D+++ G + E+ T K A + SL
Sbjct: 171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL 210
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 5e-11
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 29/125 (23%)
Query: 142 DRISGLQCID-LGGNN--FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVL 198
D G ID LG +N G IP I +L LQ++ L N G P +G +++LEVL
Sbjct: 412 DSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVL 471
Query: 199 GLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGA 258
L+YNS G IPE++ L+SL IL LNGN L G
Sbjct: 472 DLSYNS--------------------------FNGSIPESLGQLTSLRILNLNGNSLSGR 505
Query: 259 IPSGL 263
+P+ L
Sbjct: 506 VPAAL 510
|
Length = 623 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G G V + E VA+K+ + + + N+++++ + E+++L T++ NIV+L
Sbjct: 8 VVGEGAYGVVLKCRHKETKEIVAIKK-FKDSEENEEVKETTLRELKMLRTLKQENIVELK 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS------SSVHQHV--LHWPTRLQI 809
LV+EY+E L+ + +G S ++Q + +HW
Sbjct: 67 EAFRRRGKLYLVFEYVEKNMLELL-----EEMPNGVPPEKVRSYIYQLIKAIHW------ 115
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
C+ + I+HRD+K N+L+ K+ DFG A+ L++ + V
Sbjct: 116 --------CHKN-----DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYV 162
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
A + Y +PE + +D++S G +L EL G+
Sbjct: 163 ATRW-YRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 5e-11
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL-GTIRHANIVKL 756
+IG G G+V +F AVK + L +K EK ++E +L ++H +V L
Sbjct: 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + V +Y+ L L R+R + P A A
Sbjct: 62 HFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLE------------PRARFYAAEIASA 108
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH-TMSAVAGSFGY 875
L Y+H + I++RD+K NILLDS+ + DFGL K + E + T S G+ Y
Sbjct: 109 LGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNGTTSTFCGTPEY 162
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
APE + + +D + G VL E++ G
Sbjct: 163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 5e-11
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 23/225 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G+V + G + A+K + + + + E +L RH + L
Sbjct: 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 61
Query: 758 CCISSENSKLLVYEYMENQSLDRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQIAIGA--A 814
+ + V EY L + H R+R + + GA
Sbjct: 62 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY--------------GAEIV 105
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L Y+H + +++RD+K N++LD + KI DFGL K K G TM G+
Sbjct: 106 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPE 161
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
Y APE +D + GVV+ E++ G+ Y +H L E
Sbjct: 162 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 206
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 5e-11
Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 699 IGSGGSGQVYRIDINGA--GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G VY + A E + V + +LN + E ++L + H IVK
Sbjct: 8 LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKF 67
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
++ ++ EY E + LD L K + G + V W +L + G
Sbjct: 68 HASFLERDAFCIITEYCEGRDLDCKLEELKHT---GKTLSENQVCEWFIQLLL------G 118
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ YMH +I+HRD+K+ NI L + KI DFG++++L G + G+ Y
Sbjct: 119 VHYMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLL--MGSCDLATTFTGTPYYM 172
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+PE + K DI+S G +L E+ A G S+ I +
Sbjct: 173 SPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVV----------LRIVEGPT 222
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975
+ E Y ++ ++ + L + PS RPS E+L+
Sbjct: 223 PSLPE-TYSRQLNSIMQSML---NKDPSLRPSAAEILRN 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 6e-11
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 716 GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL-VYEYME 774
G VA+K + + + F E + + H NIV L + L V+EY+
Sbjct: 3 GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVP 62
Query: 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 834
++L R+ G+ + RL Q L + I+HRD+K
Sbjct: 63 GRTL------REVLAADGALPAGETG-----RLM-----LQVLDALACAHNQGIVHRDLK 106
Query: 835 SSNILL---DSEFKAKIADFGLAKMLAKQGEPHTMSA-----VAGSFGYFAPEYAYTTKV 886
NI++ AK+ DFG+ +L + + V G+ Y APE V
Sbjct: 107 PQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPV 166
Query: 887 NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
D+Y++G++ LE +TG+ G S+AE ++
Sbjct: 167 TPNSDLYAWGLIFLECLTGQRVVQG---ASVAEILYQQ 201
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 7e-11
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 31/300 (10%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGE-------FVAVKRIWNNRKLNQKLEKEFIAEIE 743
+ LT +G G GQV + G + VAVK + ++ K + ++E+E
Sbjct: 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEME 69
Query: 744 ILGTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQH 799
++ I +H NI+ L + + ++ EY +L +L R+ + S + +
Sbjct: 70 MMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEE 129
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
L + + A A+G+ Y+ + + IHRD+ + N+L+ + KIADFGLA+ +
Sbjct: 130 QLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHN 186
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLA 918
+ + APE + + D++SFGV+L E+ T + Y G L
Sbjct: 187 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + +KP C E +Y + C +PS RP+ K++++ L R
Sbjct: 247 KLLKEGHRMDKPAN----------CTHE----LYMIMRECWHAVPSQRPTFKQLVEDLDR 292
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 7e-11
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 741 EIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800
E +L ++H NIV ++ +V EY + L + + ++ L +
Sbjct: 48 EAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFP-----EDTI 102
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L W ++ + + H +++HRD+KS NI L K K+ DFG A++L
Sbjct: 103 LQWFVQMCLGV---------QHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G G+ Y PE N K DI+S G +L EL T K
Sbjct: 154 GA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLK 197
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 9e-11
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 716 GEFVAVKRIWN--NRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCC-ISSENSKLLVYE 771
E VA+K+I N ++K+ L K + E+++L R H NI L+ I + +Y
Sbjct: 27 EETVAIKKITNVFSKKI---LAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83
Query: 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 831
Y E D LH RS + + Q ++ QI G L Y+H + ++HR
Sbjct: 84 YEELMEAD--LHQIIRSGQPLTDAHFQSFIY-----QILCG----LKYIH---SANVLHR 129
Query: 832 DVKSSNILLDSEFKAKIADFGLAKML---AKQGEPHTMSAVAGSFGYFAPE----YAYTT 884
D+K N+L++++ + KI DFGLA+ + VA + Y APE + T
Sbjct: 130 DLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRW-YRAPEIMLSFQSYT 188
Query: 885 KVNEKIDIYSFGVVLLELVTGK 906
K ID++S G +L EL+ K
Sbjct: 189 K---AIDVWSVGCILAELLGRK 207
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 1e-10
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V + G+ A K++ R +K E + E +IL + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
++++ LV M L ++ ++ + + V + AA+
Sbjct: 67 YAYETKDALCLVLTLMNGGDLKFHIY----NMGNPGFDEERAVFY----------AAEIT 112
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
C + +I++RD+K NILLD +I+D GLA + +GE + G+ GY A
Sbjct: 113 CGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEI-PEGET--IRGRVGTVGYMA 169
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE + D + G ++ E++ GK
Sbjct: 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 1e-10
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL-GTIRHANIVKL 756
+IG G G+V G+ AVK + LN+K +K +AE +L ++H +V L
Sbjct: 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ V +++ L L R+RS + + A A
Sbjct: 62 HYSFQTTEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFY------------AAEIASA 108
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H + I++RD+K NILLDS+ + DFGL K Q + T + G+ Y
Sbjct: 109 LGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYL 163
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTG 905
APE + +D + G VL E++ G
Sbjct: 164 APEVIRKQPYDNTVDWWCLGAVLYEMLYG 192
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A GL ++H + II+RD+K N++LD+E KIADFG+ K T G+
Sbjct: 111 AIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCK--ENIFGGKTTRTFCGTP 165
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE + +D ++FGV+L E++ G+
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 2e-10
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 24/225 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G+V + G + A+K + + + + E +L RH + L
Sbjct: 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 61
Query: 758 CCISSENSKLLVYEYMENQSLDRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQIAIGA--A 814
+ + V EY L + H R+R + + GA
Sbjct: 62 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY--------------GAEIV 105
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L Y+H + +++RD+K N++LD + KI DFGL K G TM G+
Sbjct: 106 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPE 160
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
Y APE +D + GVV+ E++ G+ Y +H L E
Sbjct: 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 205
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 35/289 (12%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+T IG G G VY+ + VAVK N + + ++F+ E I+
Sbjct: 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--TSPSVREKFLQEAYIMRQ 63
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H +IVKL + +EN +V E L +L K SL S ++
Sbjct: 64 FDHPHIVKL-IGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYS--------Y 114
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
Q++ L Y+ + + +HRD+ + N+L+ S K+ DFGL++ L + + S
Sbjct: 115 QLS----TALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE-SYYKAS 166
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ APE + D++ FGV + E++ G + + +
Sbjct: 167 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MLG-----VKPFQG---VK 213
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ ++ G P T+Y L C + PS RP E+ L
Sbjct: 214 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 50/222 (22%), Positives = 76/222 (34%), Gaps = 42/222 (18%)
Query: 700 GSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCC 759
+ + VAVK+I + + L K EI ++H NI+
Sbjct: 11 EDLMIVHLAKH--KPTNTLVAVKKINLDSCSKEDL-KLLQQEIITSRQLQHPNILPYVTS 67
Query: 760 ISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL------QIAIGA 813
++ +V M +G L+ H+P L I
Sbjct: 68 FIVDSELYVVSPLMA--------YGSCEDLLKT---------HFPEGLPELAIAFILKDV 110
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
L Y+H IHR VK+S+ILL + K ++ + + K G+ V F
Sbjct: 111 LNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ---RVVHDF 164
Query: 874 G--------YFAPEYAYTT--KVNEKIDIYSFGVVLLELVTG 905
+ +PE NEK DIYS G+ EL G
Sbjct: 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANG 206
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 2e-10
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK------LEKEFIAEIEILGTIRHA 751
++G G G+V + G E A+K + + + +EK +A + +
Sbjct: 7 VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-----KPP 61
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+ +L C + + V EY+ L H ++ G Q V + A
Sbjct: 62 FLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQ----VGKFKEPQAVFY-------AA 108
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+ GL ++H II+RD+K N++LDSE KIADFG+ K G T G
Sbjct: 109 EISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCG 163
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
+ Y APE + +D +++GV+L E++ G+ G++ L + H
Sbjct: 164 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH 216
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 2e-10
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 39/207 (18%)
Query: 714 GAGEFVAVKR-IWNNRK---------LNQKLEK----EFIAEIEILGTIRHANIVKLWCC 759
G+G F VK+ ++ RK L + EK E + E EI+ + + IV++
Sbjct: 4 GSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGV 63
Query: 760 ISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCY 819
+E +LV E L+++L G+K + + H Q+++G
Sbjct: 64 CEAEAL-MLVMEMASGGPLNKFLSGKKDEITVSNVVELMH--------QVSMG------- 107
Query: 820 MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG----- 874
M + +HRD+ + N+LL ++ AKI+DFGL+K L + A S G
Sbjct: 108 MKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK----ARSAGKWPLK 163
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLE 901
++APE K + + D++S+G+ + E
Sbjct: 164 WYAPECINFRKFSSRSDVWSYGITMWE 190
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 3e-10
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 41/295 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILG 746
+ L + ++GSG G VY+ GE VA+K + N + K KE + E ++
Sbjct: 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMA 64
Query: 747 TIRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+ + +L C++S + LV + M L ++ K + S Q +L+W
Sbjct: 65 GVGSPYVCRLLGICLTS--TVQLVTQLMPYGCLLDYVRENKDRIGS------QDLLNWCV 116
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++ A+G+ Y+ +++HRD+ + N+L+ S KI DFGLA++L +
Sbjct: 117 QI------AKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 167
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ A E + + D++S+GV + EL+T Y
Sbjct: 168 ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG------------- 214
Query: 926 AEEKPITDALDKG--IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ I D L+KG + +P VY + + C RP +E++ R
Sbjct: 215 IPAREIPDLLEKGERLPQPPIC--TIDVYMIMVKCWMIDSECRPRFRELVDEFSR 267
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 3e-10
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 23/219 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE-KEFIAEIEILGTIRHANIVKLW 757
+GSG G V G VAVK++ +R + K E+ +L ++H N++ L
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKL--SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI-GAAQG 816
+ S + E+ + + + ++V HV Q I +G
Sbjct: 83 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-------QFLIYQILRG 132
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H + IIHRD+K SN+ ++ + + KI DFGLA+ + M+ + Y
Sbjct: 133 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYR 184
Query: 877 APEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
APE N+ +DI+S G ++ EL+TG+ G +H
Sbjct: 185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 3e-10
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G G V++ VA+K I +LE E I E+ +L ++HAN
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEI--------RLEHEEGAPCTAIREVSLLKDLKHAN 65
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV L + ++ S LV+EY++ + L +++ S+H + QI
Sbjct: 66 IVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDD-----CGNIMSMHNVKIFL---YQI--- 113
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL Y H +++HRD+K N+L++ + K+ADFGLA+ AK T S +
Sbjct: 114 -LRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTYSNEVVT 167
Query: 873 FGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
Y P+ +++ + +ID++ G + E+ +G+
Sbjct: 168 LWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 3e-10
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 41/234 (17%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR-KLNQKLEKEFIA----------EIEIL 745
+G G G+V + G+ VA+K++ + +++ + E++I+
Sbjct: 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
I+H NI+ L + LV + M + L + + + R S +
Sbjct: 75 NEIKHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTES-----QVKCILL-- 126
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK---------M 856
QI GL +H +HRD+ +NI ++S+ KIADFGLA+
Sbjct: 127 --QIL----NGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDT 177
Query: 857 LAKQGEPHT---MSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGK 906
L+K M++ + Y APE K + +D++S G + EL+TGK
Sbjct: 178 LSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 3e-10
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V + G+ A K++ R +K E + E IL + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLA 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
++++ LV M L ++ G+ + Q AI A L
Sbjct: 67 YAYETKDALCLVLTIMNGGDLKFHIYNM------GNPGFDE---------QRAIFYAAEL 111
Query: 818 CYMHHDCTPQ-IIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
C D + I++RD+K NILLD +I+D GLA + E T+ G+ GY
Sbjct: 112 CCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP---EGETVRGRVGTVGYM 168
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE K D + G ++ E++ G+
Sbjct: 169 APEVINNEKYTFSPDWWGLGCLIYEMIQGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 4e-10
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H + +++RD+K N++LD + KI DFGL K G TM G+ Y
Sbjct: 108 LGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYL 162
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
APE +D + GVV+ E++ G+ Y +H L E
Sbjct: 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 205
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 4e-10
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL-GTIRHANIVKLW 757
IG G G+V G+F AVK + L +K +K +AE +L ++H +V L
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ + V +Y+ L L R+RS + + A A L
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQ-RERSFPEPRARFY------------AAEIASAL 109
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGY 875
Y+H + II+RD+K NILLDS+ + DFG L K+G H T S G+ Y
Sbjct: 110 GYLH---SLNIIYRDLKPENILLDSQGHVVLTDFG----LCKEGIEHSKTTSTFCGTPEY 162
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
APE + +D + G VL E++ G Y + + +
Sbjct: 163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD 206
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 4e-10
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H +V L C +E+ V EY+ L + R+R L +H + + +
Sbjct: 55 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLP------EEHARFYSAEISL 107
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A L Y+H II+RD+K N+LLDSE K+ D+G+ K + G+ T S
Sbjct: 108 A------LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTF 156
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE +D ++ GV++ E++ G+
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 5e-10
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNN-RKLNQKLEKEFIAEIEILGTIR-HANIVKL 756
IG G +V + G++ A+K + + + L Q + EI+ L + H NI++L
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN---LREIQALRRLSPHPNILRL 63
Query: 757 WCCI--SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ LV+E M+ +L + GRKR L + V + +L
Sbjct: 64 IEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPE------KRVKSYMYQL------L 110
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ L +MH + I HRD+K NIL+ + K+ADFG + + + P+T +
Sbjct: 111 KSLDHMHRN---GIFHRDIKPENILIKDD-ILKLADFGSCRGIYSKP-PYT--EYISTRW 163
Query: 875 YFAPEYAYTTKV-NEKIDIYSFGVVLLELVT 904
Y APE T K+DI++ G V E+++
Sbjct: 164 YRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 828 IIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV- 886
II+RD+K NILLDSE + DFGL+K + E S G+ Y APE
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYS-FCGTIEYMAPEVIRGGSGG 184
Query: 887 -NEKIDIYSFGVVLLELVTGKEA-NYGDEHTSLAEWAWRHYAEEKPITDALDK 937
++ +D +S GV+ EL+TG E S +E + R + P +
Sbjct: 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSA 237
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 8e-10
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA-KQGEPHTMSAVAGSF 873
+GL Y+H + + IHRD+K++N+LL + K+ADFG+A L Q + +T G+
Sbjct: 112 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF---VGTP 165
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933
+ APE + + K DI+S G+ +EL G+ N D H + + P
Sbjct: 166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN-SDMHPMRVLF---LIPKNNP--- 218
Query: 934 ALDKGIAEPCYLEEMTTVYR-LALICTSTLPSSRPSMKEVLQ---ILRRCCPT 982
P E + ++ C + PS RP+ KE+L+ I++ T
Sbjct: 219 --------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKT 263
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 9e-10
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 40/333 (12%)
Query: 1 MSKVASVFPKIPVTLILLVL-LSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTST 59
+ + V + L+ P + L + L P SL S
Sbjct: 14 SNTLREVLSSNTYHTTPQSINLNFPDSNLESVAVNRLALNLSSNTLLL-LPSSLSRLLSL 72
Query: 60 SSP----CDWPEITCTFNSVTGI-SLRHKDITQKIPPIIC-DLKNLTTIDLSSNSIPGEF 113
+ + ++ + SL + +L NLT++DL +N+I
Sbjct: 73 DLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRSNISELLELTNLTSLDLDNNNI---- 128
Query: 114 PEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQT 173
T + L S L+ +DL N +P + L L+
Sbjct: 129 -------TDIPPLIGLLK-------------SNLKELDLSDNKIE-SLPSPLRNLPNLKN 167
Query: 174 LYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIG 233
L L N+ + PK + +LSNL L S K + +P E +L L+ L ++ N I
Sbjct: 168 LDLSFNDLS-DLPKLLSNLSNLNNL---DLSGNKISDLPPEIELLSALEELDLSN-NSII 222
Query: 234 EIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLT 293
E+ ++SNL +L L L+ N LE +P + L+NL L L +N +S I S L
Sbjct: 223 ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISSLGSLTNLR 280
Query: 294 DIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
++DLS N+L+ ++P L L+LL L
Sbjct: 281 ELDLSGNSLSNALPLIALLLLLLELLLNLLLTL 313
|
Length = 394 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-09
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 211 IPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLT 270
IP + L+ L+++ ++ ++ G IP ++ +++SLE+L L+ N G+IP L L +L
Sbjct: 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493
Query: 271 QLFLYDNILSGEIPSSVEALKL 292
L L N LSG +P+++ L
Sbjct: 494 ILNLNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 1e-09
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 22/219 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G G+V + + + A+K + + + F E +I+ +V+L+
Sbjct: 50 VIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
C + +V EYM L +L+S + + + +A+ A +
Sbjct: 110 CAFQDDKYLYMVMEYMPGGDL--------VNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 161
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
+IHRDVK N+LLD K+ADFG + + G +AV G+ Y +
Sbjct: 162 ---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-GTPDYIS 211
Query: 878 PEYAYTTK----VNEKIDIYSFGVVLLELVTGKEANYGD 912
PE + + D +S GV L E++ G Y D
Sbjct: 212 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A GL ++H + II+RD+K N++LDSE KIADFG+ K G T G+
Sbjct: 111 AIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TTKTFCGTP 165
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
Y APE + +D ++FGV+L E++ G+ G++ L + H
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 216
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 2e-09
Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 34/276 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G+V++ + VAVK L Q+L+ +F++E IL H NIVKL
Sbjct: 2 LLGKGNFGEVFKGTLKDKTP-VAVKTC--KEDLPQELKIKFLSEARILKQYDHPNIVKLI 58
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V E + +L +K L + ++ A+ AA G+
Sbjct: 59 GVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQ------------LVKFALDAAAGM 106
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG-SFGYF 876
Y+ + IHRD+ + N L+ KI+DFG+++ + ++ S + +
Sbjct: 107 AYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQ--EDDGIYSSSGLKQIPIKWT 161
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
APE + + + D++S+G++L E + Y A + ++
Sbjct: 162 APEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-------------EQVE 208
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
KG C + VY++ C P +RP E+
Sbjct: 209 KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSEL 244
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 2e-09
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q LC + H + IIHRD+K SNI++ S+ KI DFGLA+ G M+ +
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 190
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920
Y APE E +DI+S G ++ E++ G G +H + +W
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--IDQW 234
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 67/229 (29%), Positives = 96/229 (41%), Gaps = 68/229 (29%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE--KEFIA---EIEILGTIRHANI 753
IGSG G VY+ GE A+K I KLE ++F EI ++ +H+NI
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVI--------KLEPGEDFAVVQQEIIMMKDCKHSNI 68
Query: 754 V----------KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
V KLW C+ E+ SL H V+G S
Sbjct: 69 VAYFGSYLRRDKLWICM----------EFCGGGSLQDIYH------VTGPLS-------- 104
Query: 804 PTRLQIAI---GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM---- 856
QIA QGL Y+H +HRD+K +NILL K+ADFG++
Sbjct: 105 --ESQIAYVSRETLQGLYYLHSKGK---MHRDIKGANILLTDNGHVKLADFGVSAQITAT 159
Query: 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLLEL 902
+AK+ + G+ + APE A + N+ DI++ G+ +EL
Sbjct: 160 IAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
T+ IG G G+VY+ N E VA+K I + + ++E + EI +L
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIK-IIDLEEAEDEIE-DIQQEITVLSQCDSPY 63
Query: 753 IVKLWCCISSENSKLLVYEYMENQS-LDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
I + + ++ EY+ S LD G + +++ + +L
Sbjct: 64 ITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEE--TYIATILREIL---------- 111
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA-KQGEPHTMSAVA 870
+GL Y+H + + IHRD+K++N+LL + K+ADFG+A L Q + +T
Sbjct: 112 ---KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF---V 162
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
G+ + APE + + K DI+S G+ +EL G E D H
Sbjct: 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG-EPPNSDLH 205
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 3e-09
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 698 LIGSGGSGQVY---RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE--ILGTIRHAN 752
++G G G+V+ +I AG+ A+K + +K K+ ++E IL + H
Sbjct: 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVL---KKATLKVRDRVRTKMERDILAEVNHPF 59
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IVKL +E L+ +++ L L K + + + V + L +A+
Sbjct: 60 IVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFT-----EEDVKFYLAELALALD 112
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
L II+RD+K NILLD E K+ DFGL+K + E S G+
Sbjct: 113 HLHSL---------GIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS-FCGT 161
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE + D +SFGV++ E++TG
Sbjct: 162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 48/211 (22%), Positives = 82/211 (38%), Gaps = 29/211 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVKLW 757
I G G VY G++ A+K + + + + AE I+ + + KL+
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSV-HQHVLHWPTRLQIAIGAAQG 816
S++ LV EY+ G SL+ + + + + +
Sbjct: 64 YSFQSKDYLYLVMEYLNG--------GDCASLIKTLGGLPEDWAKQYIAEVVLGVE---- 111
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM--LAKQGEPHTMSAVAGSFG 874
+H IIHRD+K N+L+D K+ DFGL++ K+ G+
Sbjct: 112 --DLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK--------FVGTPD 158
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE ++ D +S G V+ E + G
Sbjct: 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 3e-09
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 722 KRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRW 781
KR+ + +LE E +A LG + H NI+K+ + SE YM Q D
Sbjct: 198 KRVKAGSRAAIQLENEILA----LGRLNHENILKIEEILRSEA-----NTYMITQKYDFD 248
Query: 782 LHGRKRSLVSGSSSVHQHVLHW---PTRLQIAIGAAQGLC---YMHHDCTPQIIHRDVKS 835
L+ S ++ W P Q Q LC Y+H ++IHRD+K
Sbjct: 249 LY----------SFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKL 295
Query: 836 SNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSF 895
NI L+ + K + DFG A K+ E V G+ +PE E DI+S
Sbjct: 296 ENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWV-GTVATNSPEILAGDGYCEITDIWSC 354
Query: 896 GVVLLELVT 904
G++LL++++
Sbjct: 355 GLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 4e-09
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 297 LSMNN--LTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVL 354
L ++N L G IP + KL++LQ + L N + G +P S+G I +L+ + NS +G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 355 PPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
P +G ++L ++ N SG +P L GG L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL--GGRL 514
|
Length = 623 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 42/225 (18%)
Query: 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-----EIEILGTI 748
T +GSG G V GE VA+K KL++ + E A E+ +L +
Sbjct: 18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIK------KLSRPFQSEIFAKRAYRELTLLKHM 71
Query: 749 RHANIVKLWCCISSENSK------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+H N++ L +S S LV YM+ L + + G S V+Q +
Sbjct: 72 QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK-IMGHPLSEDKVQYLVYQML-- 127
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
GL Y+H + IIHRD+K N+ ++ + + KI DFGLA+ +
Sbjct: 128 ------------CGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 170
Query: 863 PHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGK 906
M+ + Y APE N+ +DI+S G ++ E++TGK
Sbjct: 171 ---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKL 756
++G G G+V ++ G E A+K + + L + E IL H + L
Sbjct: 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTAL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
CC +++ V EY+ L + R R S + A
Sbjct: 62 HCCFQTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFY------------AAEVTLA 108
Query: 817 LCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L ++H H +I+RD+K NILLD+E K+ADFG+ K G T + G+ Y
Sbjct: 109 LMFLHRHG----VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDY 162
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYGDE 913
APE + +D ++ GV++ E++ G+ EA+ D+
Sbjct: 163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 4e-09
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 740 AEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH 799
+E+ L H IVK + S++ LL+ EY L++ + R +
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKE----------- 162
Query: 800 VLHWPTR--------LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851
H P + QI + L +H ++HRD+KS+NI L K+ DF
Sbjct: 163 --HLPFQEYEVGLLFYQIVL----ALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDF 213
Query: 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT 904
G +K + S+ G+ Y APE + ++K D++S GV+L EL+T
Sbjct: 214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT 266
|
Length = 478 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 4e-09
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 697 NLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
N I + G+G R+ + N VA+KR ++ + QK +E +IL I H
Sbjct: 33 NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPF 92
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
V L+ E+ LV E++ +L KR +P +
Sbjct: 93 CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR---------------FPNDVG-CFY 136
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
AAQ + + + I++RD+K N+LLD + K+ DFG AK++ + T + + G+
Sbjct: 137 AAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV----DTRTYT-LCGT 191
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
Y APE + D ++ G+ + E++ G Y +E
Sbjct: 192 PEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232
|
Length = 340 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 5e-09
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 699 IGSGGSGQV-YRIDINGAGEFVAVKRIWNNRKLNQKL-EKEFIAEIEILGTIRHANIVKL 756
+GSG G V +D G VA+K+++ R +L K E+ +L ++H N++ L
Sbjct: 23 VGSGAYGTVCSALD-RRTGAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMKHENVIGL 79
Query: 757 WCCISSE------NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+ + + LV +M L + + K S V+Q +
Sbjct: 80 LDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQML---------- 128
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+GL Y+H IIHRD+K N+ ++ + + KI DFGLA+ T S +
Sbjct: 129 ----KGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--------QTDSEMT 173
Query: 871 G---SFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
G + Y APE + +DI+S G ++ E++TGK G +H
Sbjct: 174 GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH 221
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 5e-09
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN---IV 754
+IG G G+V + + + A+K + + + F E +I+ HAN IV
Sbjct: 50 VIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMA---HANSEWIV 106
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L + +V EYM L +L+S + + + +A+ A
Sbjct: 107 QLHYAFQDDKYLYMVMEYMPGGDL--------VNLMSNYDIPEKWARFYTAEVVLALDAI 158
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ + IHRDVK N+LLD K+ADFG + G +AV G+
Sbjct: 159 HSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAV-GTPD 208
Query: 875 YFAPEYAYTTKVN----EKIDIYSFGVVLLELVTGKEANYGD 912
Y +PE + + + D +S GV L E++ G Y D
Sbjct: 209 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 5e-09
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 22/220 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKL 756
++G G G+V + +G AVK + + L + + E IL R H + +L
Sbjct: 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 61
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+CC + + V E++ L + +R A
Sbjct: 62 YCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-------------FDEARARFYAAEITSA 108
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L ++H II+RD+K N+LLD E K+ADFG+ K G+ T S G+ Y
Sbjct: 109 LMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TTSTFCGTPDYI 163
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYGDE 913
APE +D ++ GV+L E++ G EA D+
Sbjct: 164 APEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD 203
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 58.6 bits (141), Expect = 8e-09
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Q LC + H + IIHRD+K SNI++ S+ KI DFGLA+ G M+ +
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 183
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE E +DI+S G ++ E+V K
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 8e-09
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + I+HRD+K N+L++S KI DFGLA+ + + E M+ +
Sbjct: 114 RGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEEPDESKHMTQEVVTQY 169
Query: 875 YFAPEYA-----YTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE YT+ V DI+S G + EL+ +
Sbjct: 170 YRAPEILMGSRHYTSAV----DIWSVGCIFAELLGRR 202
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (143), Expect = 8e-09
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 38/233 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK-LW 757
IG+G G+V+ + EF K I + R L ++ + + + E+ ++ ++H NIV+ +
Sbjct: 21 IGNGRFGEVFLVKHKRTQEFFCWKAI-SYRGLKEREKSQLVIEVNVMRELKHKNIVRYID 79
Query: 758 CCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
++ N KL ++ E+ + L R + + + +H + TR +
Sbjct: 80 RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMF----GKIEEHAIVDITRQLL-----HA 130
Query: 817 LCYMHH----DCTPQIIHRDVKSSNILLDSEFK-----------------AKIADFGLAK 855
L Y H+ +++HRD+K NI L + + AKI DFGL+K
Sbjct: 131 LAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK 190
Query: 856 MLAKQGEPHTMSAVAGSFGYFAPEYAY--TTKVNEKIDIYSFGVVLLELVTGK 906
+ + H+ G+ Y++PE T ++K D+++ G ++ EL +GK
Sbjct: 191 NIGIESMAHS---CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240
|
Length = 1021 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 9e-09
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLW 757
IG G G+V+++ G AVK + +++++E AE IL + H N+VK +
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIE----AEYNILKALSDHPNVVKFY 81
Query: 758 CCISSENSK-----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
++ K LV E S+ + G + + ++LH
Sbjct: 82 GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILH---------E 132
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A GL ++H + T IHRDVK +NILL +E K+ DFG++ L + G+
Sbjct: 133 ALMGLQHLHVNKT---IHRDVKGNNILLTTEGGVKLVDFGVSAQLTST--RLRRNTSVGT 187
Query: 873 FGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTG 905
+ APE + + + D++S G+ +EL G
Sbjct: 188 PFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG 225
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-08
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 319 LGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPL 378
LGL + L G +P I K+ L+ + NS+ G +PP +G ++LE ++S N F+G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 379 PENLCAGGVLQGVVAFENNLSGAVPKSLG 407
PE+L L+ + N+LSG VP +LG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 1e-08
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + + IHRD+K++N+LL + K+ADFG+A L + G+
Sbjct: 112 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPF 166
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
+ APE + + K DI+S G+ +EL G E + + H + + P T
Sbjct: 167 WMAPEVIKQSAYDSKADIWSLGITAIELAKG-EPPHSELHPMKVLFL---IPKNNPPT-- 220
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ---ILR 977
L+ ++P L+E C + PS RP+ KE+L+ I+R
Sbjct: 221 LEGNYSKP--LKEFVEA------CLNKEPSFRPTAKELLKHKFIVR 258
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 693 LTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
L ++G G G V ++ G+ VAVK + + ++E EF++E +
Sbjct: 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIE-EFLSEAACMKDFD 59
Query: 750 HANIVKLW-CCISSEN-----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
H N++KL C + + +++ +M++ L +L S +
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL---------YSRLGGLPEKL 110
Query: 804 PTR--LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML---- 857
P + L+ + A G+ Y+ IHRD+ + N +L + +ADFGL+K +
Sbjct: 111 PLQTLLKFMVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGD 167
Query: 858 -AKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHT 915
+QG M + A + YT+K D+++FGV + E+ T + Y G E+
Sbjct: 168 YYRQGRIAKMPVKWIAIESLA-DRVYTSKS----DVWAFGVTMWEIATRGQTPYPGVENH 222
Query: 916 SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975
+ ++ RH K D LD+ +Y L C P RP+ ++ ++
Sbjct: 223 EIYDYL-RHGNRLKQPEDCLDE-------------LYDLMYSCWRADPKDRPTFTKLREV 268
Query: 976 L 976
L
Sbjct: 269 L 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRI-WNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
LI +G G VY + + A+K+I N L ++++ F E +IL + +V +
Sbjct: 8 LISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVF-VERDILTFAENPFVVSM 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+C ++ +V EY+E G +L+ ++ + R+ A
Sbjct: 67 FCSFETKRHLCMVMEYVEG--------GDCATLLKNIGALPVDM----ARMYFA-ETVLA 113
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM-------------LAKQGEP 863
L Y+H I+HRD+K N+L+ S K+ DFGL+K+ + K
Sbjct: 114 LEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTRE 170
Query: 864 HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
V G+ Y APE + +D ++ G++L E + G +GD
Sbjct: 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
GL +MH+ +++RD+K +NILLD +I+D GLA +K+ +PH A G+ GY
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPH---ASVGTHGY 161
Query: 876 FAPEYAYT-TKVNEKIDIYSFGVVLLELVTG 905
APE T + D +S G +L +L+ G
Sbjct: 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 698 LIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKL----NQKLEKEFIAEIEILGTIRH 750
++G GG G+V+++ G+ A+K + +K NQK AE IL ++H
Sbjct: 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVL---KKATIVRNQKDTAHTKAERNILEAVKH 59
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
IV L + L+ EY+ L ++H + + ++ + + + +A
Sbjct: 60 PFIVDLIYAFQTGGKLYLILEYLSGGEL--FMHLEREGIFMEDTACF-----YLSEISLA 112
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE-PHTMSAV 869
+ ++H II+RD+K NILLD++ K+ DFGL K +G HT
Sbjct: 113 LE------HLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF--- 160
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ Y APE + + +D +S G ++ +++TG
Sbjct: 161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTG 196
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
GL +MH+ +++RD+K +NILLD +I+D GLA +K+ +PH A G+ GY
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPH---ASVGTHGY 161
Query: 876 FAPE-YAYTTKVNEKIDIYSFGVVLLELVTG 905
APE + D +S G +L +L+ G
Sbjct: 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+V L C + + LV EY+ L + R+R L +H + + IA
Sbjct: 58 LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLP------EEHARFYAAEICIA-- 108
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
L ++H II+RD+K N+LLD++ K+ D+G+ K G+ T S G+
Sbjct: 109 ----LNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--TTSTFCGT 159
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE + +D ++ GV++ E++ G+
Sbjct: 160 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 828 IIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVN 887
I++RD+K NILLDSE + DFGL+K + + T S G+ Y APE +
Sbjct: 126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYS-FCGTIEYMAPEIIRGKGGH 184
Query: 888 EK-IDIYSFGVVLLELVTG 905
K +D +S G+++ EL+TG
Sbjct: 185 GKAVDWWSLGILIFELLTG 203
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 45/257 (17%)
Query: 736 KEFIAEIEILGTIRHANIVKLW--CCISSEN----SKLLVYEYMENQSLDRWLHGRKRSL 789
++F++E + H N+++L C + E+ S +++ +M++ L +L
Sbjct: 45 EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLL------ 98
Query: 790 VSGSSSVHQHVLHWPTRLQIAIGA--AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847
S + + PT++ + A G+ Y+ + IHRD+ + N +L+
Sbjct: 99 ---YSRLGDCPQYLPTQMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCMLNENMNVC 152
Query: 848 IADFGLAKML-----AKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902
+ADFGL+K + +QG M + A + YTTK D++SFGV + E+
Sbjct: 153 VADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLA-DRVYTTKS----DVWSFGVTMWEI 207
Query: 903 VTGKEANY-GDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTST 961
T + Y G E++ + ++ + ++P D LD +Y L C
Sbjct: 208 ATRGQTPYPGVENSEIYDYLRQGNRLKQP-PDCLD-------------GLYSLMSSCWLL 253
Query: 962 LPSSRPSMKEVLQILRR 978
P RPS + + L +
Sbjct: 254 NPKDRPSFETLRCELEK 270
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 3e-08
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+GL Y+H + IIHRD+K SN+ ++ + + +I DFGLA+ + M+ +
Sbjct: 129 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE-----MTGYVATRW 180
Query: 875 YFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
Y APE N+ +DI+S G ++ EL+ GK G+++
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY 221
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 68/300 (22%), Positives = 118/300 (39%), Gaps = 65/300 (21%)
Query: 699 IGSGGSGQVYR--------IDINGAGEFVAVKRIWNNRKLNQKLEK--EFIAEIEILGTI 748
+G G +Y+ +DI G G+ V+V + L F ++ +
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVL----KVLGSDHRDSLAFFETASLMSQL 58
Query: 749 RHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H ++VKL+ C+ EN ++V EY++ LD +LH R+++ VS HW +L
Sbjct: 59 SHKHLVKLYGVCVRDEN--IMVEEYVKFGPLDVFLH-REKNNVSL---------HW--KL 104
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK-------AKIADFGLAKMLAKQ 860
+A A L Y+ +++H +V NIL+ K++D G+ + +
Sbjct: 105 DVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKI--DIYSFGVVLLELVTGKEANYGDEHTSLA 918
E + APE + + I D +SFG LLE+ + E +S
Sbjct: 162 EERVERIP------WIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK 215
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
E + +++ D + L C + P+ RPS + ILR
Sbjct: 216 E----RFYQDQHRLPMPDCA-----------ELANLINQCWTYDPTKRPSFR---AILRD 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 5e-08
Identities = 69/283 (24%), Positives = 108/283 (38%), Gaps = 43/283 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
LI +Y+ N + V ++ K ++ L EI+ L I NI+K++
Sbjct: 27 LIKENDQNSIYKGIFNN--KEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84
Query: 758 CCISSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
I L L+ EY L L K L + T+L +AI
Sbjct: 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD-------------LSFKTKLDMAIDC 131
Query: 814 AQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL ++ + P ++++ S + L+ +K KI GL K+L+ + V
Sbjct: 132 CKGLYNLYKYTNKP---YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMV--- 185
Query: 873 FGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
YF+ + ++ K DIYS GVVL E+ TGK + + K
Sbjct: 186 --YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL 243
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
D C LE V CTS RP++KE+L
Sbjct: 244 PLD---------CPLEIKCIVEA----CTSHDSIKRPNIKEIL 273
|
Length = 283 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 9e-08
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G GQVY++ A+K + +KE +A+ E+ TI NI L
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVL---------SKKEIVAKKEVAHTIGERNI--LVR 49
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH-QHVLHWP-TRLQIAIGAAQG 816
+ E+ ++ ++ D +L S G H Q + R + I A+
Sbjct: 50 TLLDESPFIVGLKFSFQTDSDLYLVTDYMS--GGELFWHLQKEGRFSEDRAKFYI--AEL 105
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ + H I++RD+K NILLD+ + DFGL+K A + T + G+ Y
Sbjct: 106 VLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK--ANLTDNKTTNTFCGTTEYL 163
Query: 877 APEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDE 913
APE K + +D +S GV++ E+ G Y ++
Sbjct: 164 APEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED 201
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 9e-08
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H +V L C +E+ V E++ L + R+R L +H + + +
Sbjct: 55 HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLP------EEHARFYSAEISL 107
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A L ++H II+RD+K N+LLD+E K+ D+G+ K + G+ T S
Sbjct: 108 A------LNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTF 156
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE +D ++ GV++ E++ G+
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 9e-08
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 698 LIGSGGSGQVY---RIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-AEIEILGTIRHAN- 752
++G+G G+V+ ++ + +G+ A+K + + + E E ++L IR +
Sbjct: 7 VLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 66
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+V L ++ L+ +Y+ L L R+R ++ I
Sbjct: 67 LVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERF----------------KEQEVQIY 110
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+ + + + H II+RD+K NILLDS + DFGL+K + E + G+
Sbjct: 111 SGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED-EVERAYSFCGT 169
Query: 873 FGYFAPEYAY--TTKVNEKIDIYSFGVVLLELVTGKEANYGD-EHTSLAEWAWRHYAEEK 929
Y AP+ ++ +D +S GV++ EL+TG D E S AE + R E
Sbjct: 170 IEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 229
Query: 930 P 930
P
Sbjct: 230 P 230
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 699 IGSGGSGQV-----YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHAN 752
+G+G G+V Y + + A VAVK + +++ + ++E++I+ + H N
Sbjct: 43 LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER--EALMSELKIMSHLGNHEN 100
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV L + L++ EY L +L ++ S ++ + +L + ++
Sbjct: 101 IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLT-----LEDLLSFSYQV----- 150
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A+G+ ++ + IHRD+ + N+LL KI DFGLA+ +
Sbjct: 151 -AKGMAFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLP 206
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT 904
+ APE + + D++S+G++L E+ +
Sbjct: 207 VKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 1e-07
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 63/246 (25%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G G+V+ + + G G+ A+K + + + K + E EIL T+ H + L+
Sbjct: 8 LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY 67
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG---AA 814
+E LV +Y L R L + L + AA
Sbjct: 68 ASFQTETYLCLVMDYCPGGELFRLLQRQPGK-----------------CLSEEVARFYAA 110
Query: 815 QGLC---YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-------- 863
+ L Y+H I++RD+K NILL ++DF L+K + P
Sbjct: 111 EVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKG 167
Query: 864 --------------------HTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVL 899
+ S V G+ Y APE + + V D ++ G++L
Sbjct: 168 SRRSSVNSIPSETFSEEPSFRSNSFV-GTEEYIAPEVISGDGHGSAV----DWWTLGILL 222
Query: 900 LELVTG 905
E++ G
Sbjct: 223 YEMLYG 228
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 78/340 (22%), Positives = 133/340 (39%), Gaps = 83/340 (24%)
Query: 698 LIGSGGSGQV-----YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHA 751
++G G G+V + ID + VAVK + ++ K ++E++IL I H
Sbjct: 14 VLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASE--HKALMSELKILIHIGNHL 71
Query: 752 NIVKLWCCISSENSKLLV-YEYMENQSLDRWL-----------------HGRKRSLV--- 790
N+V L + N L+V E+ + +L +L GR R++V
Sbjct: 72 NVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQS 131
Query: 791 -------SGSSSVHQ--HVLH--------------WPTRLQI------AIGAAQGLCYMH 821
+G +SV W + L + + A+G+ ++
Sbjct: 132 RVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL- 190
Query: 822 HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA 881
+ + IHRD+ + NILL KI DFGLA+ + K + + + APE
Sbjct: 191 --ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248
Query: 882 YTTKVNEKIDIYSFGVVLLELVTGKEANY-----GDEHTSLAEWAWRHYAEEKPITDALD 936
+ + D++SFGV+L E+ + + Y +E + R A E
Sbjct: 249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPE-------- 300
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
A P +YR+ L C P RP+ +++IL
Sbjct: 301 --NATP-------EIYRIMLACWQGDPKERPTFSALVEIL 331
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 24/224 (10%)
Query: 699 IGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG+G G+V + + + V VK + + +++L F+ E++ + H N+++
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLL--FLQEVQPYRELNHPNVLQC 60
Query: 757 WC-CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
CI S LLV E+ L +L R +V+ + ++A A
Sbjct: 61 LGQCIES-IPYLLVLEFCPLGDLKNYLR-SNRGMVAQMAQKD-------VLQRMACEVAS 111
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
GL ++H IH D+ N L ++ KI D+GLA + T A +
Sbjct: 112 GLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRW 168
Query: 876 FAPEYA-------YTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
APE +K +I+S GV + EL T + Y D
Sbjct: 169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPD 212
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 2e-07
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A+ LC + + +I+RD+K NILLD + + DFGL K+ K + + G+
Sbjct: 100 AELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KTNTFCGTP 157
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915
Y APE + +D ++ GV+L E++TG Y DE+
Sbjct: 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY-DENV 198
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 66/253 (26%), Positives = 100/253 (39%), Gaps = 70/253 (27%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----AEIEILGTIRHANI 753
+IG G G+V + G A+K++ RK ++ LEKE + AE +IL + +
Sbjct: 8 VIGRGAFGEVRLVQKKDTGHIYAMKKL---RK-SEMLEKEQVAHVRAERDILAEADNPWV 63
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI---- 809
VKL+ EN L+ EY+ + L K+ + TR I
Sbjct: 64 VKLYYSFQDENYLYLIMEYLPGGDMMTLL--MKKDTFT----------EEETRFYIAETI 111
Query: 810 -AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP----- 863
AI + L Y IHRD+K N+LLD++ K++DFGL L K
Sbjct: 112 LAIDSIHKLGY---------IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI 162
Query: 864 --------------HTMS-----------------AVAGSFGYFAPEYAYTTKVNEKIDI 892
MS + G+ Y APE T N++ D
Sbjct: 163 LSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW 222
Query: 893 YSFGVVLLELVTG 905
+S GV++ E++ G
Sbjct: 223 WSLGVIMYEMLVG 235
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 699 IGSGGSGQVY---RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK 755
+G G G VY R D E+ A+K+I + EI +L ++H N++
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEY-ALKQIEGT-----GISMSACREIALLRELKHPNVIA 62
Query: 756 LWCCISSENSK--LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL--QIAI 811
L S + + L+++Y E+ D W H K +S ++ + P + +
Sbjct: 63 LQKVFLSHSDRKVWLLFDYAEH---DLW-HIIK---FHRASKANKKPMQLPRSMVKSLLY 115
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE----FKAKIADFGLAKMLAKQGEP-HTM 866
G+ Y+H + ++HRD+K +NIL+ E + KIAD G A++ +P +
Sbjct: 116 QILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 172
Query: 867 SAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGK 906
V +F Y APE + + IDI++ G + EL+T +
Sbjct: 173 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G G+V + + A+K + + + F E +I+ +V+L+
Sbjct: 50 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V EYM L +L+S + + + +A+ A +
Sbjct: 110 YAFQDDRYLYMVMEYMPGGDL--------VNLMSNYDVPEKWARFYTAEVVLALDAIHSM 161
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
+ IHRDVK N+LLD K+ADFG + K+G +AV G+ Y +
Sbjct: 162 GF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYIS 211
Query: 878 PEYAYTTK----VNEKIDIYSFGVVLLELVTGKEANYGD 912
PE + + D +S GV L E++ G Y D
Sbjct: 212 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 4e-07
Identities = 63/220 (28%), Positives = 88/220 (40%), Gaps = 33/220 (15%)
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEI 742
+ NILSSLT G G+V+ +G + V VK + + + EI
Sbjct: 92 MQYNILSSLT------PGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGR--------EI 137
Query: 743 EILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+IL TI H I+ L I + K V M D + + V S L
Sbjct: 138 DILKTISHRAIINL---IHAYRWKSTVCMVMPKYKCDLFTY------VDRSGP-----LP 183
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
+ I + L Y+H IIHRDVK+ NI LD A + DFG A L +
Sbjct: 184 LEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240
Query: 863 PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902
+G+ +PE K DI+S G+VL E+
Sbjct: 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280
|
Length = 392 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 4e-07
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 57/245 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEI----EILGTIRHANI 753
+IG G G+V + G A+K + RK + LEKE +A I +IL A +
Sbjct: 8 VIGRGAFGEVRLVQKKDTGHIYAMKIL---RKADM-LEKEQVAHIRAERDILVEADGAWV 63
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
VK++ + + L+ E++ + L +K +L ++ + +AI A
Sbjct: 64 VKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQF------YIAETVLAIDA 116
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK-----------QGE 862
L + IHRD+K N+LLD++ K++DFGL L K
Sbjct: 117 IHQLGF---------IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNP 167
Query: 863 PHTMS----------------------AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLL 900
P S + G+ Y APE T N+ D +S GV++
Sbjct: 168 PSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227
Query: 901 ELVTG 905
E++ G
Sbjct: 228 EMLIG 232
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 693 LTESNLIGSGGSGQVYRIDI---NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
T ++G G G V + +G+ + VAVK + + + +E EF+ E +
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIE-EFLREAACMKEFD 59
Query: 750 HANIVKLWCCISSENSK------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
H N++KL +K +++ +M++ L +L S + +
Sbjct: 60 HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL---------MSRIGEEPFTL 110
Query: 804 P--TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
P T ++ I A G+ Y+ + IHRD+ + N +L+ +ADFGL+K +
Sbjct: 111 PLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGD 167
Query: 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
A + A E D+++FGV + E++T + Y
Sbjct: 168 YYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG--------- 218
Query: 922 WRHYAEEKPITDALDKG--IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
E I + L KG + +P + + VY L C S P RPS + + L
Sbjct: 219 ----VENSEIYNYLIKGNRLKQP--PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 6e-07
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 741 EIEILGTIRHANIVKLW-CCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQ 798
EI +L ++H N++ L +S + K+ L+++Y E+ D W H K S ++
Sbjct: 48 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH---DLW-HIIKFHRASKANK--- 100
Query: 799 HVLHWPTRLQIAIGAAQGLCY-----MHHDCTPQIIHRDVKSSNILLDSE----FKAKIA 849
+Q+ G + L Y +H+ ++HRD+K +NIL+ E + KIA
Sbjct: 101 ------KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 154
Query: 850 DFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGK 906
D G A++ +P + V +F Y APE + + IDI++ G + EL+T +
Sbjct: 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 7e-07
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
I G G+VY + AVK + +N+ + + AE + L + IV L+
Sbjct: 12 ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW---PTRLQIAIGAAQ 815
+ S N+ LV EY+ + G +SL+ H+ + ++ A
Sbjct: 72 SLQSANNVYLVMEYL--------IGGDVKSLL--------HIYGYFDEEMAVKYISEVAL 115
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856
L Y+H IIHRD+K N+L+ +E K+ DFGL+K+
Sbjct: 116 ALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 1e-06
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 376 GPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFN 435
G +P ++ LQ + N++ G +P SLG+ +L + L N F+G +P L +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 436 LSSLMLSDNTISGELPS 452
L L L+ N++SG +P+
Sbjct: 492 LRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 1e-06
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 56/303 (18%)
Query: 694 TESNLIGSGGSGQVYR---IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
T S+L+ G G+++ ID E V VK + ++ Q + E +L +
Sbjct: 9 TLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV--TLLLQESCLLYGLS 66
Query: 750 HANIVKLWC-CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H NI+ + CI ++Y YM +L +L + + ++ L +
Sbjct: 67 HQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQL-----VH 121
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
+AI A G+ Y+H +IH+D+ + N ++D E + KI D L++ L + H
Sbjct: 122 MAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFP-MDYH---- 173
Query: 869 VAGSFG--------YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920
G + A E + + D++SFGV+L EL+T L +
Sbjct: 174 ---CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT------------LGQT 218
Query: 921 AWRHYAEEKP--ITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
Y E P + L G +A+P C E ++ + C + P RPS +++Q
Sbjct: 219 P---YVEIDPFEMAAYLKDGYRLAQPINCPDE----LFAVMACCWALDPEERPSFSQLVQ 271
Query: 975 ILR 977
L
Sbjct: 272 CLT 274
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 3e-06
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-FIAEIEILGTIRHANIVKL 756
+IG G G+V + + A + A+K I N ++ ++ E F E ++L + I L
Sbjct: 8 VIGRGAFGEVAVVKLKNADKVFAMK-ILNKWEMLKRAETACFREERDVLVNGDNQWITTL 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
EN+ LV +Y L L + L + + + IAI +
Sbjct: 67 HYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL------AEMVIAIDSVHQ 120
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y +HRD+K NIL+D ++ADFG L + G + AV G+ Y
Sbjct: 121 LHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYI 170
Query: 877 APEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGD 912
+PE K + D +S GV + E++ G+ Y +
Sbjct: 171 SPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 4e-06
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNE 888
IHRD+ + NILL KI DFGLA+ + K + + APE +
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTT 254
Query: 889 KIDIYSFGVVLLELVTGKEANYG----DEHTSLAEWAWRHYAEEKPITDALDKG--IAEP 942
+ D++SFGV+L E+ + + Y DE E+ R L +G + P
Sbjct: 255 QSDVWSFGVLLWEIFSLGASPYPGVQIDE-----EFCRR-----------LKEGTRMRAP 298
Query: 943 CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
Y +Y + L C P RP+ E+++IL
Sbjct: 299 EYATP--EIYSIMLDCWHNNPEDRPTFSELVEIL 330
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 5e-06
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
N+IG+G G VY E VA+K++ + + + E+ I+ + H NI+ L
Sbjct: 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR-------ELLIMKNLNHINIIFL 124
Query: 757 ------WCCISSENSKLL--VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
C +E + L V E++ Q++ +++ R+ H L
Sbjct: 125 KDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARN---------NHALPLFLVKL 174
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA-KIADFGLAKMLAKQGEPHTMS 867
+ + L Y+H + I HRD+K N+L+D K+ DFG AK L ++S
Sbjct: 175 YSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL--AGQRSVS 229
Query: 868 AVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTG 905
+ F Y APE T ID++S G ++ E++ G
Sbjct: 230 YICSRF-YRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267
|
Length = 440 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 60/234 (25%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
L+G+G GQVY+ G+ A+K + + E+E EI +L H NI
Sbjct: 13 LVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLKKYSHHRNIATY 68
Query: 757 WCCISSENSK------LLVYEYMENQSL-------------DRWLHGRKRSLVSGSSSVH 797
+ +N LV E+ S+ + W+ R ++ G S +H
Sbjct: 69 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128
Query: 798 QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
QH ++IHRD+K N+LL + K+ DFG++ L
Sbjct: 129 QH---------------------------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161
Query: 858 AKQ-GEPHTMSAVAGSFGYFAPEYAYTTK-----VNEKIDIYSFGVVLLELVTG 905
+ G +T G+ + APE + + K D++S G+ +E+ G
Sbjct: 162 DRTVGRRNTF---IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 5e-06
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNE 888
IHRD+ + NILL KI DFGLA+ + K + + APE +
Sbjct: 201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 260
Query: 889 KIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEM 948
+ D++SFGV+L E+ + + Y E+ R +E A D E
Sbjct: 261 QSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRR--LKEGTRMRAPDYTTPE------- 310
Query: 949 TTVYRLALICTSTLPSSRPSMKEVLQIL 976
+Y+ L C PS RP+ E+++ L
Sbjct: 311 --MYQTMLDCWHGEPSQRPTFSELVEHL 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 1e-05
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW-NLTRLEISNNRF 468
L+ + L N+ LP+ L NL +L LS N +S + NL L++S N+
Sbjct: 140 SNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDLSGNKI 198
Query: 469 SGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWT 528
S + + L SNN E+ L++L +L+ L L NKL LP I + +
Sbjct: 199 S-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLS 255
Query: 529 SLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLY 588
+L L+L+ N++S I +GSL + LDLSGN S +P L L L+
Sbjct: 256 NLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTL 313
Query: 589 GNIPDEFNNLAYDDSFLNNS 608
+ + N++ +++ L+N
Sbjct: 314 KALELKLNSILLNNNILSNG 333
|
Length = 394 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 1e-05
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 18/170 (10%)
Query: 739 IAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQ 798
E IL I H +I++L + L+ + L +L ++ + ++ +
Sbjct: 131 ATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIER 189
Query: 799 HVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858
VL + + Y+H + +IIHRD+K+ NI ++ + DFG A
Sbjct: 190 SVL-------------RAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFG-AACFP 232
Query: 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 908
+ AG+ APE +DI+S G+VL E+ T ++
Sbjct: 233 VDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS 282
|
Length = 391 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+L+G G G+V + G+ A+K + + L Q+ F E +IL I +L
Sbjct: 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQL 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+++ LV EY L L+ + + Q L L +AI +
Sbjct: 67 QYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQF---DEDMAQFYL---AELVLAIHSVHQ 120
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ Y +HRD+K N+L+D K+ADFG A L ++ V G+ Y
Sbjct: 121 MGY---------VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPV-GTPDYI 170
Query: 877 APEYAYTTKVNEK------IDIYSFGVVLLELVTGK 906
APE T + K D +S GV+ E++ G+
Sbjct: 171 APEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
N+V L I SE+S LV ++ E L W H K + + V W + +A+
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKL--WSHISKFLNIP-----EECVKRWAAEMVVAL 98
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
A +H + I+ RD+ +NILLD ++ F + + + +
Sbjct: 99 DA------LHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM-- 147
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE ++ E D +S G +L EL+TGK
Sbjct: 148 ---YCAPEVGGISEETEACDWWSLGAILFELLTGK 179
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 19/87 (21%)
Query: 827 QIIHRDVKSSNILLD-SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE------ 879
IIH D+K N+L D ++ + + D+GL K++ T S G+ YF+PE
Sbjct: 129 NIIHNDIKLENVLYDRAKDRIYLCDYGLCKII------GTPSCYDGTLDYFSPEKIKGHN 182
Query: 880 YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y + D ++ GV+ EL+TGK
Sbjct: 183 YDVS------FDWWAVGVLTYELLTGK 203
|
Length = 267 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 3e-05
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----AEIEILGTIRHANI 753
+IG G G+V + G A+K + RK + LEKE + AE +IL +
Sbjct: 8 VIGRGAFGEVRLVQKKDTGHVYAMKIL---RKADM-LEKEQVGHIRAERDILVEADSLWV 63
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
VK++ + + L+ E++ + L +K +L + + +AI +
Sbjct: 64 VKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQF------YIAETVLAIDS 116
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-------HTM 866
L + IHRD+K N+LLDS+ K++DFGL L K H++
Sbjct: 117 IHQLGF---------IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSL 167
Query: 867 S--------------------------AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLL 900
+ G+ Y APE T N+ D +S GV++
Sbjct: 168 PSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227
Query: 901 ELVTG 905
E++ G
Sbjct: 228 EMLIG 232
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 3e-05
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
++G+G GQVY+ G+ A+K + + + E+E EI +L H NI
Sbjct: 23 VVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTEDEEEEIKLEINMLKKYSHHRNIATY 78
Query: 757 WCCI------SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+ ++ LV E+ S+ + K +++ + + + R +
Sbjct: 79 YGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK------GNALKEDWIAYICREIL- 131
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ-GEPHTMSAV 869
+GL ++H ++IHRD+K N+LL + K+ DFG++ L + G +T
Sbjct: 132 ----RGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--- 181
Query: 870 AGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTG 905
G+ + APE + + DI+S G+ +E+ G
Sbjct: 182 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 4e-05
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---- 884
+HRD+K N+LLD ++ADFG + + G + AV G+ Y +PE
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAV-GTPDYISPEILQAMEDGM 182
Query: 885 -KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
K + D +S GV + E++ G+ Y + SL E
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVE 215
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 5e-05
Identities = 78/312 (25%), Positives = 118/312 (37%), Gaps = 56/312 (17%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
N + + L++L L L+ N++ P L +NL +L L DN +
Sbjct: 103 NRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE--------- 153
Query: 290 LKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNS 349
S+P L NL+ L L N LS ++P + + L + N
Sbjct: 154 ---------------SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNK 197
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
+S LPPEI L SALE ++S NN + SL N
Sbjct: 198 IS-DLPPEIELLSALEELDLS-------------------------NNSIIELLSSLSNL 231
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFS 469
+ L ++L +N+ +LP + NL +L LS+N IS + NL L++S N S
Sbjct: 232 KNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLS 290
Query: 470 GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS 529
+ L N L + + + LN +L + S P + S
Sbjct: 291 NALPLIALLLLLLE--LLLNLLLTLKALELKLNSILLNNNILSNGETS--SPEALSILES 346
Query: 530 LNNLNLARNELS 541
LNNL N L
Sbjct: 347 LNNLWTLDNALD 358
|
Length = 394 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 7e-05
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 699 IGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG+G G+V ++N V VK + + + ++++ F+ E + +++H+N+++
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMK--FLEEAQPYRSLQHSNLLQC 60
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHG-RKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+ LLV E+ L +L RK L++ + Q ++A A
Sbjct: 61 LGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQ---------RMACEIAL 111
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
GL ++H + IH D+ N LL ++ KI D+GL+ K+ T + +
Sbjct: 112 GLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRW 168
Query: 876 FAPEYAYTTKVN-------EKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
APE N ++ +++S GV + EL L +RH ++E
Sbjct: 169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF------------ELGSQPYRHLSDE 216
Query: 929 KPIT 932
+ +T
Sbjct: 217 QVLT 220
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA-GSFGYFAPEYAY----- 882
+HRD+K N+LLD ++ADFG L G S VA G+ Y +PE
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--VQSNVAVGTPDYISPEILQAMEDG 181
Query: 883 TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
+ + D +S GV + E++ G+ Y + SL E
Sbjct: 182 KGRYGPECDWWSLGVCMYEMLYGETPFYAE---SLVE 215
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 1e-04
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
I GA +GL Y+H + IHR++K+S+IL+ + ++ L + G+ +
Sbjct: 106 ILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162
Query: 869 VAGSFG-----YFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
F + +PE Y Y N K DIYS G+ EL TG+
Sbjct: 163 DFPQFSTSVLPWLSPELLRQDLYGY----NVKSDIYSVGITACELATGR 207
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-04
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
L+ + AQG+ ++ + IHRDV + N+LL AKI DFGLA+ +
Sbjct: 215 LRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926
+ APE + + D++S+G++L E+ SL + +
Sbjct: 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGKSPYPGIL 319
Query: 927 EEKPITDALDKG--IAEPCY-LEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ +G ++ P + E+ Y + +C + P+ RP+ ++ Q+++R
Sbjct: 320 VNSKFYKMVKRGYQMSRPDFAPPEI---YSIMKMCWNLEPTERPTFSQISQLIQR 371
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 2e-04
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 35 EERTILLNLKQQLGNPPS--LQSWT-STSSPCDWPEITCT 71
++R LL K L PS L SW S+S PC W +TC
Sbjct: 3 DDRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 4e-04
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 806 RLQIAIGAAQGLC---YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
Q+ A Q L Y+H + IIHRD+K+ N+L++ + DFG A
Sbjct: 259 LAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315
Query: 863 PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLE 901
+AG+ APE +DI+S G+V+ E
Sbjct: 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 29/161 (18%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV--K 755
L+ G + +VY + ++V +I +R+ E+E IL + + K
Sbjct: 5 LLKGGLTNRVYLLG-TKDEDYVL--KINPSREKGADREREV----AILQLLARKGLPVPK 57
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+ S+ L+ E++E ++LD VS IA A+
Sbjct: 58 VLASGESDGWSYLLMEWIEGETLDE---------VSEEEKE-----------DIAEQLAE 97
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856
L +H + H D+ NIL+D I D+ A
Sbjct: 98 LLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 0.001
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 29/172 (16%)
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A+G+ ++ + IHRD+ + NILL KI DFGLA+ +
Sbjct: 224 AKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPV 280
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933
+ APE + + D++S+G++L E+ + + Y P+
Sbjct: 281 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY----------------PGMPVDS 324
Query: 934 ALDKGIAE-------PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
K I E C EM Y + C P RP+ K+++Q++ +
Sbjct: 325 KFYKMIKEGYRMLSPECAPSEM---YDIMKSCWDADPLKRPTFKQIVQLIEQ 373
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 41/119 (34%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLA---------------------------------- 854
IHRD+K NIL+D + K+ DFGL
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182
Query: 855 ---KML----AKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
K L +Q + ++ G+ Y APE T + D +S GV+L E++ G+
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNE 888
+HRD+ + N+L+ KI DFGLA+ + + + + + APE +
Sbjct: 261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTT 320
Query: 889 KIDIYSFGVVLLELVT 904
D++SFG++L E+ T
Sbjct: 321 LSDVWSFGILLWEIFT 336
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 398 LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWN 457
L G +P + R L+++ L N G +P L + +L L LS N+ +G +P ++
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP-ESLGQ 488
Query: 458 LTRLEISN---NRFSGQIQRGVG 477
LT L I N N SG++ +G
Sbjct: 489 LTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNE 888
+HRD+ + N+LL KI DFGLA+ + + + + APE +
Sbjct: 259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTT 318
Query: 889 KIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG--IAEPCYLE 946
D++S+G++L E+ SL + + + + G +A+P +
Sbjct: 319 LSDVWSYGILLWEIF------------SLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHAT 366
Query: 947 EMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
+ VY + + C ++ P RPS + I+ P
Sbjct: 367 Q--EVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.003
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 220 KLKTLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
LK+L ++ N + IP+ L +L++L L+GN+L P L +L L L N
Sbjct: 1 NLKSLDLS-NNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGN 58
|
Length = 60 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 25/214 (11%)
Query: 699 IGSGGSGQVY--RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK- 755
IG+G G+V I + V VK + N + K + EF+ + + ++H NI++
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQC 60
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L C+ + LLV+EY E L +L + + + Q ++A A
Sbjct: 61 LGQCVEAI-PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ---------RMACEIAA 110
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
G+ +MH +H D+ N L S+ K+ D+G+ K+ T +
Sbjct: 111 GVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRW 167
Query: 876 FAPEYA-------YTTKVNEKIDIYSFGVVLLEL 902
APE T + + ++++ GV L EL
Sbjct: 168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWEL 201
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.004
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 45/123 (36%)
Query: 829 IHRDVKSSNILLDSEFKAKIADFGLA---------------------------------- 854
IHRD+K NIL+D + K+ DFGL
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 855 -----------KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELV 903
+ A+Q + ++ G+ Y APE T + D +S GV+L E++
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 904 TGK 906
G+
Sbjct: 243 VGQ 245
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1024 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.98 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.98 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.98 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.98 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.98 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.98 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.98 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.98 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.98 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.98 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.93 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.93 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.92 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.92 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.91 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.91 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.89 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.87 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.81 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.79 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.79 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.78 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.77 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.77 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.77 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.74 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.72 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.71 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.71 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.68 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.65 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.65 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.64 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.63 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.61 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.61 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.52 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.52 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.5 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.5 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.49 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.42 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.39 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.33 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.32 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.3 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.27 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.23 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.16 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.16 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.14 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.13 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.11 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.08 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.06 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.06 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 99.06 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.04 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.03 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.03 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.01 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.98 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.98 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.97 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.95 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.93 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.9 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.89 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.79 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.72 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.7 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.7 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.68 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.66 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.61 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.59 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.55 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.53 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.52 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.51 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.49 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.49 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-117 Score=1131.78 Aligned_cols=909 Identities=37% Similarity=0.605 Sum_probs=777.6
Q ss_pred CHHHHHHHHHHHHHcCCCC-CCCCCCCCCCCCCCCcceeeC-CCEEEEEeCCCcccccCCccccCCCceeEEEccCCCCC
Q 001706 33 NTEERTILLNLKQQLGNPP-SLQSWTSTSSPCDWPEITCTF-NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIP 110 (1024)
Q Consensus 33 ~~~~~~aL~~~k~~~~~~~-~l~sw~~~~~~c~w~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~ 110 (1024)
.++|++||++||+++.++. .+.+|+.+++||.|.||+|+. .+|+.|+|+++++.+.+++.+..+++|+.|+|++|+++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 6689999999999997654 478999888999999999974 68999999999999999999999999999999999999
Q ss_pred CCCCcccc-CCCCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCccc
Q 001706 111 GEFPEFLY-NCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189 (1024)
Q Consensus 111 ~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 189 (1024)
|.+|..+. ++++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..|
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 99998765 999999999999999998885 568999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCC
Q 001706 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNL 269 (1024)
Q Consensus 190 ~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 269 (1024)
+++++|++|+|++|. ..+.+|..++.+++|++|+|++|++.+.+|..++++++|++|++++|.+++.+|..+..+++|
T Consensus 185 ~~l~~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 262 (968)
T PLN00113 185 TNLTSLEFLTLASNQ--LVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262 (968)
T ss_pred hhCcCCCeeeccCCC--CcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCC
Confidence 999999999999997 446789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEccCCccCCCCCcchhhc-ccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccc
Q 001706 270 TQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNN 348 (1024)
Q Consensus 270 ~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 348 (1024)
++|+|++|++++.+|..+... +|+.|+|++|++++.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|
T Consensus 263 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 342 (968)
T PLN00113 263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342 (968)
T ss_pred CEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCC
Confidence 999999999999988887655 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCc
Q 001706 349 SLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPT 428 (1024)
Q Consensus 349 ~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 428 (1024)
++++.+|..++.+.+|+.|++++|++++.+|..++.+.+|+.+++++|++.+.+|..++++++|+.|+|++|++++.+|.
T Consensus 343 ~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~ 422 (968)
T PLN00113 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS 422 (968)
T ss_pred CCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCcccCCCCcc--cccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCC
Q 001706 429 GLWTTFNLSSLMLSDNTISGELPSK--TAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHL 506 (1024)
Q Consensus 429 ~~~~l~~L~~L~Ls~N~i~~~~p~~--~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 506 (1024)
.+..++.|+.|++++|.+++.+|.. ...+|++|+|++|++.+.+|..++ .++|+.|++++|++++.+|..+.++++|
T Consensus 423 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L 501 (968)
T PLN00113 423 EFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSEL 501 (968)
T ss_pred hHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhcc
Confidence 9999999999999999999988874 457899999999999999988764 5899999999999999999999999999
Q ss_pred cEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCcccccc-cccccccCC
Q 001706 507 NTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSN 585 (1024)
Q Consensus 507 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l~-l~~l~l~~N 585 (1024)
++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+. |+.||+++|
T Consensus 502 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 581 (968)
T PLN00113 502 MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHN 581 (968)
T ss_pred CEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999884 999999999
Q ss_pred ccccCCCccccccccC-CccccCCCCccCCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHhhhhhhhhhhhh
Q 001706 586 KLYGNIPDEFNNLAYD-DSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLR 664 (1024)
Q Consensus 586 ~l~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~lp~c~~~~~~~~~~~~~~~~~ii~~~~~~~lv~~~l~~~~~~~~~~ 664 (1024)
+++|.+|..-...++. ++|.+|+++|+..+....+.|.... +......++++++++++++++++++++++|++.+
T Consensus 582 ~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (968)
T PLN00113 582 HLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR----KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNN 657 (968)
T ss_pred cceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc----ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999765444443 5689999999976665666674321 1112222222223333333333333332222111
Q ss_pred cccCC---CCCCcccccccc---cCcchhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHH
Q 001706 665 RKRNR---DPATWKLTSFHQ---LGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF 738 (1024)
Q Consensus 665 ~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ 738 (1024)
.+.++ +...|....+.. ..+..++....++..+.||+|+||.||+|....++..||||++..... ..
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~ 730 (968)
T PLN00113 658 LELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IP 730 (968)
T ss_pred ccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------cc
Confidence 11111 111222221111 123344566788889999999999999999988899999998854321 12
Q ss_pred HHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhc
Q 001706 739 IAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818 (1024)
Q Consensus 739 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 818 (1024)
.+|++++++++|||||++++++.+++..|+||||+++|+|.++++. ++|..+.+++.|+|+||+
T Consensus 731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----------------l~~~~~~~i~~~ia~~L~ 794 (968)
T PLN00113 731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----------------LSWERRRKIAIGIAKALR 794 (968)
T ss_pred HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----------------CCHHHHHHHHHHHHHHHH
Confidence 3468889999999999999999999999999999999999999962 789999999999999999
Q ss_pred cccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHH
Q 001706 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVV 898 (1024)
Q Consensus 819 ~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvi 898 (1024)
|||..+.++|+||||||+||+++.++.+++. ||.+..... .....+|+.|+|||++.+..++.++|||||||+
T Consensus 795 yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv 867 (968)
T PLN00113 795 FLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLI 867 (968)
T ss_pred HhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHH
Confidence 9997767799999999999999999888876 665543211 122367899999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC--CcchHHHHHHHhhccCCchhhhccCCCC--cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 899 LLELVTGKEANYGDE--HTSLAEWAWRHYAEEKPITDALDKGIAE--PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 899 l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+|||+||+.||.... .....+|+..... .......+++.+.. ....++..++.+++.+||+.||++||+|+|+++
T Consensus 868 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 868 LIELLTGKSPADAEFGVHGSIVEWARYCYS-DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHhcC-ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 999999999985432 3344455433222 22233333443322 234456678899999999999999999999999
Q ss_pred HHhhcCC
Q 001706 975 ILRRCCP 981 (1024)
Q Consensus 975 ~L~~~~~ 981 (1024)
.|+++..
T Consensus 947 ~L~~~~~ 953 (968)
T PLN00113 947 TLESASR 953 (968)
T ss_pred HHHHhhc
Confidence 9999864
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-62 Score=628.20 Aligned_cols=501 Identities=36% Similarity=0.546 Sum_probs=476.4
Q ss_pred CceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccc-cCCCCcEEeCCCcccccccccccccccccceEe
Q 001706 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID-RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLY 175 (1024)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 175 (1024)
.+++.|+|++|+++|.+|..|..+++|++|+|++|++++.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 4789999999999999999999999999999999999999997765 999999999999999998886 5689999999
Q ss_pred eeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcC
Q 001706 176 LYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHL 255 (1024)
Q Consensus 176 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 255 (1024)
|++|.+++.+|..++++++|++|+|++|. ..+.+|..++++++|++|+|++|++.+.+|..++++++|++|+|++|.+
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNV--LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCc--ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 99999999999999999999999999997 4467899999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCcEEEccCCccCCCCCcchhhc-ccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccC
Q 001706 256 EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI 334 (1024)
Q Consensus 256 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 334 (1024)
++.+|..+..+++|++|+|++|++++.+|..+... +|++|+|++|++++.+|..+.++++|+.|++++|++.+.+|..+
T Consensus 225 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 99999999999999999999999999999888766 79999999999999999999999999999999999999999999
Q ss_pred CCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccce
Q 001706 335 GKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRT 414 (1024)
Q Consensus 335 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~ 414 (1024)
.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++.+|..+..+.+|+.|++++|++.+.+|.++..+++|+.
T Consensus 305 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~ 384 (968)
T PLN00113 305 IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFK 384 (968)
T ss_pred cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCccCCCccccccccccccccccCcccCCCCcc--cccCCCEEEcccCcCCCCcccccCCccccceeecCCccc
Q 001706 415 VQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK--TAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLF 492 (1024)
Q Consensus 415 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~--~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l 492 (1024)
|++++|++.+.+|..+..+++|+.|++++|++++.+|.. ..++|+.|++++|++++.++..+..+++|+.|++++|++
T Consensus 385 L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 385 LILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred EECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCcee
Confidence 999999999999999999999999999999999988875 346899999999999999999999999999999999999
Q ss_pred cccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCcc
Q 001706 493 SGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEI 572 (1024)
Q Consensus 493 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~ 572 (1024)
.+.+|..+ ..++|+.|+|++|++++.+|..+.++++|+.|+|++|+++|.+|..++++++|++|+|++|+++|.+|..+
T Consensus 465 ~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 543 (968)
T PLN00113 465 FGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASF 543 (968)
T ss_pred eeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhH
Confidence 99999876 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-ccccccccCCccccCCCccccccccCC
Q 001706 573 GQL-KLNTFNLSSNKLYGNIPDEFNNLAYDD 602 (1024)
Q Consensus 573 ~~l-~l~~l~l~~N~l~g~~p~~~~~~~~~~ 602 (1024)
+.+ +|+.|||++|+++|.+|..+..+....
T Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 574 (968)
T PLN00113 544 SEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574 (968)
T ss_pred hCcccCCEEECCCCcccccCChhHhcCcccC
Confidence 998 499999999999999999887765443
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=415.39 Aligned_cols=277 Identities=47% Similarity=0.760 Sum_probs=236.7
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-c
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-S 765 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~ 765 (1024)
...+++|...++||+|+||.||+|...+ +..||||++....... .++|.+|++++.+++|||+|+++|||.+.+ .
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~ 146 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEH 146 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCce
Confidence 4457899999999999999999999874 4889999885443211 456999999999999999999999999988 4
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.+||||||++|+|.++++.... . .++|..|.+||.++|+||+|||+.+.++|+||||||+|||+|++++
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~----------~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKG----------E-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCC----------C-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 9999999999999999997653 1 5899999999999999999999999889999999999999999999
Q ss_pred EEEeccccceecccCCCCceeccc-ccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCC---CCcchHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAV-AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD---EHTSLAEWA 921 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~---~~~~~~~~~ 921 (1024)
+||+|||+|+..... .. ..... .||.+|+|||++..+..+.|+|||||||++.|++||+.+.... ....+..|+
T Consensus 216 aKlsDFGLa~~~~~~-~~-~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEG-DT-SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred EEccCccCcccCCcc-cc-ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 999999999664331 11 11112 8999999999999999999999999999999999999887643 344578888
Q ss_pred HHHhhccCCchhhhccCCC-CcccH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 922 WRHYAEEKPITDALDKGIA-EPCYL-EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
+...... .+.+++|+.+. ..+.. +....+..++.+|++.+|.+||+|.||+++|+.+..
T Consensus 294 ~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 294 KPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 7666555 78999999986 44443 678889999999999999999999999999966653
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=403.94 Aligned_cols=259 Identities=36% Similarity=0.496 Sum_probs=216.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcE-EEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-ceEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-SKLL 768 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~l 768 (1024)
+++...+.||+|+||+||+|.+. |+. ||||++......+.. .++|.+|+.++++++|||||+++|+|.+.. ..++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i 117 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI 117 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence 34455566999999999999996 445 999999665443333 789999999999999999999999999887 7999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCc-eEeCCCCCCCEEECCCC-cE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ-IIHRDVKSSNILLDSEF-KA 846 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlk~~Nill~~~~-~~ 846 (1024)
||||+++|+|.++++... ...+++..+++||.|||+||.|||+. + ||||||||+|||++.++ ++
T Consensus 118 VtEy~~~GsL~~~l~~~~-----------~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~ 183 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKKR-----------KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTL 183 (362)
T ss_pred EEEeCCCCcHHHHHhhcc-----------cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEE
Confidence 999999999999999741 14699999999999999999999998 7 99999999999999997 99
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhcc--CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY--TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
||+|||+++...... ..++...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+.........
T Consensus 184 KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~---- 257 (362)
T KOG0192|consen 184 KIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA---- 257 (362)
T ss_pred EECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH----
Confidence 999999998754321 4455578999999999999 66999999999999999999999999987665322221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.+..+.+...+..++..+..+|.+||+.||++||++.|++..|+.+..
T Consensus 258 ---------v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 258 ---------VVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ---------HHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 112222333344466889999999999999999999999999998763
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=382.41 Aligned_cols=252 Identities=31% Similarity=0.471 Sum_probs=213.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc-eEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS-KLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~l 768 (1024)
.++++..+.||+|..|+|||+.++.+++.+|+|.+.. ..+....+++.+|++++++.+||+||++||+|...+. ..+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 4567778899999999999999999999999999943 3345667899999999999999999999999999884 999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||++|+|++++...++ +++...-+|+.+|++||.|||+ + +|+||||||+|||++..|.||
T Consensus 156 ~mEYMDgGSLd~~~k~~g~-------------i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVK 219 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGR-------------IPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVK 219 (364)
T ss_pred ehhhcCCCCHHHHHhhcCC-------------CCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEE
Confidence 9999999999999987653 8899999999999999999996 5 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC--cchHHHHHHHh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH--TSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~--~~~~~~~~~~~ 925 (1024)
|||||.++.+... ......||..|||||.+.+..|+.++||||||++++|+.+|+.|+..... ....+.... +
T Consensus 220 icDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~-I 294 (364)
T KOG0581|consen 220 ICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA-I 294 (364)
T ss_pred eccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH-H
Confidence 9999999877432 45668899999999999999999999999999999999999999876411 122221111 1
Q ss_pred hccCCchhhhccCCCCcccH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYL-EEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+. ....+. .+++++.+++..|+++||.+||+++|+++
T Consensus 295 v~~p----------pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 295 VDEP----------PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred hcCC----------CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111 111222 36789999999999999999999999985
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=397.34 Aligned_cols=255 Identities=31% Similarity=0.463 Sum_probs=216.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.++..+.||+|.||+||.|.+.+ ...||+|.++... -..++|.+|+++|++|+|++||+++++|..++.+|||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc----cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 45567889999999999999974 3479999986432 224678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
||+.|+|.+||+...+ ..+.....+.++.|||+||+||+++ ++|||||.++||||+++..+||+||
T Consensus 282 ~m~~GsLl~yLr~~~~-----------~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREG-----------GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred ecccCcHHHHhhhcCC-----------CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccc
Confidence 9999999999997433 4588889999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC-CCCCCCCCCcchHHHHHHHhhccCC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG-KEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
|+|+...+ +.+.......-...|.|||.+..++++.|||||||||+||||+|. +.||.+....+
T Consensus 348 GLAr~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-------------- 412 (468)
T KOG0197|consen 348 GLARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-------------- 412 (468)
T ss_pred ccccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------
Confidence 99995432 333333334456789999999999999999999999999999995 45555444332
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
+.+.++.+.+.++|..|+..++++|..||+.+|++|||++.+...+++..
T Consensus 413 v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 413 VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 34456677778888999999999999999999999999999999988875
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=372.51 Aligned_cols=274 Identities=26% Similarity=0.364 Sum_probs=225.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..++||+|+||+||.++.+++++.||+|++++..-......+...+|..++..++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 56899999999999999999999999999999999877666666678899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||+.||.|..++++... +++..++-++..|+.||.|||++ +||||||||+|||+|.+|+++|+
T Consensus 104 ld~~~GGeLf~hL~~eg~-------------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~Lt 167 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR-------------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLT 167 (357)
T ss_pred EeccCCccHHHHHHhcCC-------------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEe
Confidence 999999999999997664 88899999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||+|+.....+ ......+||+.|||||++.+..|+.++|+||+|+++|||++|..||.+.+.....+.+... +
T Consensus 168 DFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~----k 241 (357)
T KOG0598|consen 168 DFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKG----K 241 (357)
T ss_pred ccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcC----c
Confidence 999998543322 2334479999999999999999999999999999999999999999987655443333221 1
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCcccccccc
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGF 1009 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1024)
. ...+.-...+..+++.+.+..||++| .|+.....++++||+|. ++.|..
T Consensus 242 ---------~-~~~p~~ls~~ardll~~LL~rdp~~R------------------Lg~~~d~~~ik~HpfF~--~inW~~ 291 (357)
T KOG0598|consen 242 ---------L-PLPPGYLSEEARDLLKKLLKRDPRQR------------------LGGPGDAEEIKRHPFFK--GINWEK 291 (357)
T ss_pred ---------C-CCCCccCCHHHHHHHHHHhccCHHHh------------------cCCCCChHHhhcCcccc--cCCHHH
Confidence 0 00000012344555555555555555 44566777799999999 888886
Q ss_pred ccccch
Q 001706 1010 KRSKKV 1015 (1024)
Q Consensus 1010 ~~~~~~ 1015 (1024)
.-+|+.
T Consensus 292 l~~k~l 297 (357)
T KOG0598|consen 292 LLAKKL 297 (357)
T ss_pred HHhcCC
Confidence 655544
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-44 Score=392.01 Aligned_cols=251 Identities=28% Similarity=0.383 Sum_probs=220.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|...+.||+|||+.||++++..+|+.||+|++.+..-......+.+.+||++.+.|+|||||+++++|+|...+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 46999999999999999999998899999999998766666777889999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|+|++++|..+++.++ .+++.+++.++.||+.|+.|||++ +|+|||||..|+|++++.+|||+|
T Consensus 98 ELC~~~sL~el~Krrk-------------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgD 161 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK-------------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGD 161 (592)
T ss_pred EecCCccHHHHHHhcC-------------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecc
Confidence 9999999999998543 599999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+|..+...+ ......+|||.|.|||++....++..+||||+||++|.|++|++||......+....+...-.
T Consensus 162 FGLAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y---- 235 (592)
T KOG0575|consen 162 FGLATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY---- 235 (592)
T ss_pred cceeeeecCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc----
Confidence 99999886432 234457899999999999999999999999999999999999999987655444443322110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..|...+.+..++|..+++.||.+|||+++|+.
T Consensus 236 -----------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 -----------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -----------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112234467889999999999999999999984
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-44 Score=372.49 Aligned_cols=213 Identities=33% Similarity=0.502 Sum_probs=190.3
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
.+.+|...+.||+|+||+||+|+++.++..||||.+.+..- .....+.+..|+++++.++|||||++++++..++..|+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 35678888899999999999999999999999999965432 45667889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-----
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE----- 843 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~----- 843 (1024)
|||||.||+|.+|++.+++ +++.+.+.++.|+|.||++||++ +||||||||.|||++..
T Consensus 87 VMEyC~gGDLs~yi~~~~~-------------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGR-------------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred EEEeCCCCCHHHHHHHcCC-------------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCC
Confidence 9999999999999998764 89999999999999999999999 99999999999999875
Q ss_pred -CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 844 -FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 844 -~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
-.+||+|||+|+.+..+ ......+|++.|||||+++..+|+.|+|+||+|+++|||++|+.||......++..++
T Consensus 151 ~~~LKIADFGfAR~L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~ 226 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYI 226 (429)
T ss_pred CceEEecccchhhhCCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 45899999999998643 2334578999999999999999999999999999999999999999877666655533
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=375.41 Aligned_cols=258 Identities=28% Similarity=0.335 Sum_probs=214.8
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhH----HHHHHHHHHHHHHhccccCceeeEEEEEec
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ----KLEKEFIAEIEILGTIRHANIVKLWCCISS 762 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 762 (1024)
+.+.+.|.+.+.+|+|+||.|-+|..+.+|+.||||++.+...... .....+.+|+++|++++||+||+++++|++
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 3456778889999999999999999999999999999965443321 123457899999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
++..|+||||++||+|.+++-..+. +.+..-..+++|++.|+.|||++ ||+||||||+|||+..
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~-------------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~ 311 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKY-------------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSN 311 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccc-------------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEecc
Confidence 9999999999999999999987654 66667788999999999999999 9999999999999976
Q ss_pred C---CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCC---CCCCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 001706 843 E---FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV---NEKIDIYSFGVVLLELVTGKEANYGDEHTS 916 (1024)
Q Consensus 843 ~---~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslGvil~el~tg~~p~~~~~~~~ 916 (1024)
+ ..+||+|||+|+..+ ....+...+||+.|.|||++.+..+ ..+.|+||+||+||-+++|..||.+.....
T Consensus 312 ~~e~~llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 312 DAEDCLLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred CCcceEEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 6 779999999999874 4456777899999999999987643 347899999999999999999998654333
Q ss_pred -hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 917 -LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 917 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+.+.+.+.... +..+.+.+..++..++|.+|+..||++||+++|+++
T Consensus 389 sl~eQI~~G~y~-----------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 389 SLKEQILKGRYA-----------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cHHHHHhcCccc-----------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 44443322111 122345566788999999999999999999999985
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=408.06 Aligned_cols=270 Identities=27% Similarity=0.431 Sum_probs=224.7
Q ss_pred CCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 692 SLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
+....+.||+|+||+||+|+.. +....||||.++... +.+...+|+||+++++.++|||||+++|.|.+++..
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 3445678999999999999863 234579999997554 345678999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccC--CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSG--SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~--~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
++|+|||..|+|.+||........-. +.+ ....++-.+.+.||.|||.||+||-++ .+|||||..+|+||.++.
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~-~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQD-TPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 99999999999999998765532211 111 155688899999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.|||+|||+++.+-..+.+.....-.-..+|||||.+..++|+.+||||||||+|||+++ |.-||++-..++..+.+.
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~- 719 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR- 719 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH-
Confidence 999999999997655443333323445689999999999999999999999999999999 667888766655444332
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.+...+++..++.++|+||..||+..|++||+++||-..|+....
T Consensus 720 -------------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 720 -------------AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred -------------cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 233356788899999999999999999999999999999998874
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=360.85 Aligned_cols=263 Identities=25% Similarity=0.399 Sum_probs=217.5
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEE-EEecCC-ce
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC-CISSEN-SK 766 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~-~~~~~~-~~ 766 (1024)
...+|++.+.||+|+||+|||+....+|..||.|.+. -...+....+....|+.++++|+|||||++++ .+.++. ..
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~-f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQ-FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcc-hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 3567899999999999999999999999999999986 44456677889999999999999999999998 444444 48
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCc--eEeCCCCCCCEEECCCC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~ 844 (1024)
++|||||.+|+|...++..+.. .+.+++.++|+++.|+++||.++|.+. ++ |+||||||.||+++.+|
T Consensus 96 nivmE~c~~GDLsqmIk~~K~q---------kr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~g 165 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQ---------KRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANG 165 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhc---------cccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCC
Confidence 9999999999999999865431 356999999999999999999999842 24 88999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
.||++|||+++++... .......+|||.||+||.+.+..|+.+|||||+||++|||+.-+.||+++.-.++...+
T Consensus 166 vvKLGDfGL~r~l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI--- 240 (375)
T KOG0591|consen 166 VVKLGDFGLGRFLSSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI--- 240 (375)
T ss_pred ceeeccchhHhHhcch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH---
Confidence 9999999999988543 22345678999999999999999999999999999999999999999987433322221
Q ss_pred hhccCCchhhhccCCCCccc-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 925 YAEEKPITDALDKGIAEPCY-LEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
... --.+.+ ...+.++.+++..|+..||+.||+.-.+++.++.
T Consensus 241 -~qg----------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 241 -EQG----------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -HcC----------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111 112233 5567889999999999999999996666655554
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=396.03 Aligned_cols=469 Identities=26% Similarity=0.403 Sum_probs=350.8
Q ss_pred EEEEeCCCcccccCCccccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeCCCc
Q 001706 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155 (1024)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 155 (1024)
..+.+.+|++.. +.+.+.++..|++|++++|+++ ..|++++.+..++.|+.|+|+++ .+|.+++.+.+|+.|+.++|
T Consensus 48 ~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 48 QKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccc
Confidence 345555555543 3334556666666666666666 56666666666666666666666 56666666666666666666
Q ss_pred ccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccC
Q 001706 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEI 235 (1024)
Q Consensus 156 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 235 (1024)
.+. .+|+.++.+..|..|+..+|+++ ..|..++++.+|..|++.+| ++....
T Consensus 125 ~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n--------------------------~l~~l~ 176 (565)
T KOG0472|consen 125 ELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGN--------------------------KLKALP 176 (565)
T ss_pred cee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhcccc--------------------------chhhCC
Confidence 666 55666666666666666666666 55555666666666655555 444444
Q ss_pred chhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccC-CCc
Q 001706 236 PEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFG-KLK 314 (1024)
Q Consensus 236 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~ 314 (1024)
|+.+. ++.|++||...|.++ .+|..++.+.+|.-|+|.+|+|. ..|..-++..|.+|+++.|+|. .+|+..+ ++.
T Consensus 177 ~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~ 252 (565)
T KOG0472|consen 177 ENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIE-MLPAEHLKHLN 252 (565)
T ss_pred HHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHH-hhHHHHhcccc
Confidence 44444 888888899888887 78888999999999999999988 5555555567999999999998 6676655 899
Q ss_pred ccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhcccc--cccee
Q 001706 315 NLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV--LQGVV 392 (1024)
Q Consensus 315 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~--L~~l~ 392 (1024)
+|..|||.+|+++ +.|+.++-+.+|.+||+++|.|+ .+|.+++++ .|+.|.+.+|.+...--+-+...+. |++|.
T Consensus 253 ~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLr 329 (565)
T KOG0472|consen 253 SLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLR 329 (565)
T ss_pred cceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHH
Confidence 9999999999999 89999999999999999999999 578899999 9999999999987332222222221 33332
Q ss_pred c-----c-cCccCC-----C----CCcCCCCccccceeecccccCccCCCcccccccc---ccccccccCcccCCCCccc
Q 001706 393 A-----F-ENNLSG-----A----VPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFN---LSSLMLSDNTISGELPSKT 454 (1024)
Q Consensus 393 l-----~-~n~l~~-----~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~i~~~~p~~~ 454 (1024)
- . ++.-.| . .......+.+.+.|+++.-+++ .+|+.++.-.. ....+++.|++. ++|...
T Consensus 330 s~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L 407 (565)
T KOG0472|consen 330 SKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRL 407 (565)
T ss_pred HhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhh
Confidence 2 0 011111 1 1122345678899999999998 89998887765 788999999998 777643
Q ss_pred c--cC-CCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccC
Q 001706 455 A--WN-LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLN 531 (1024)
Q Consensus 455 ~--~~-L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 531 (1024)
. .. .+.+++++|.++ .+|..++.+++|+.|+|++|-+. .+|.+++.+..|+.|++|.|++. .+|..+..+..|+
T Consensus 408 ~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE 484 (565)
T KOG0472|consen 408 VELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE 484 (565)
T ss_pred HHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH
Confidence 2 22 445667766665 88889999999999999999988 89999999999999999999997 8999998888999
Q ss_pred eEeccCccccCccchhhhhccccceecccCCcCCCCCCCcccccc-cccccccCCccc
Q 001706 532 NLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLY 588 (1024)
Q Consensus 532 ~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l~-l~~l~l~~N~l~ 588 (1024)
.+-.++|++...-|..++++.+|++|||.+|.+. .||+.+|++. +.+|++.+|++.
T Consensus 485 tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 485 TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9988999997444444999999999999999998 8999999994 999999999998
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=376.12 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=217.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 768 (1024)
..+|...+.||+|+|++||+|+...+++.||||++.+..-..+...+-+.+|-.+|.+| .||.|++++..|+|+...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 45677889999999999999999999999999998665555555567899999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|+||+++|+|.+++++.+. +++...+.++.+|+.|++|||+. |||||||||+|||+|+||+++|
T Consensus 152 vLe~A~nGdll~~i~K~Gs-------------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikI 215 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGS-------------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKI 215 (604)
T ss_pred EEEecCCCcHHHHHHHhCc-------------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEE
Confidence 9999999999999998764 89999999999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCC---------ce--ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 849 ADFGLAKMLAKQGEP---------HT--MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~---------~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
.|||.|+.+.+.... .. ...++||-.|.+||++.....++++|+|+||||+|+|+.|.+||.+..+.-.
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli 295 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI 295 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH
Confidence 999999987543211 11 2558899999999999999999999999999999999999999998876655
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 972 (1024)
.+.+...- . ..+...++.+.+|+.+.+..||.+|++..||
T Consensus 296 FqkI~~l~-----------y----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 296 FQKIQALD-----------Y----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred HHHHHHhc-----------c----cCCCCCCHHHHHHHHHHHccCccccccHHHH
Confidence 55443311 1 1223334788899999999999999999544
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=348.57 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=213.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.|+..-++|+|+||.|||++++.+|+.||||++.. +..++...+-.+||++++++++|||+|.++++|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~E-sedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVE-SEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeecc-CCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 457778899999999999999999999999999954 3445666788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||+.. +.+-+...+ ..++...+.++++|++.|+.|+|++ +|+||||||+|||++.+|.+|+||
T Consensus 81 E~~dhT-vL~eLe~~p------------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCD 144 (396)
T KOG0593|consen 81 EYCDHT-VLHELERYP------------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCD 144 (396)
T ss_pred eecchH-HHHHHHhcc------------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEecc
Confidence 999854 444444433 3588889999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||+|+.+...++ ..+.++.|..|+|||.+.+ ..|+...||||+||++.||++|.+.|.+..+.+....+......-.
T Consensus 145 FGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~ 222 (396)
T KOG0593|consen 145 FGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLI 222 (396)
T ss_pred chhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccC
Confidence 999999864333 3456889999999999887 6899999999999999999999999888776665544443322211
Q ss_pred Cch-----------hhhccCCCC-----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 930 PIT-----------DALDKGIAE-----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 930 ~~~-----------~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
+-. ...-+.... ...+....-+.++++.|++.||++|++-+|++
T Consensus 223 prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 223 PRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred HHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 111 111111111 11222345788999999999999999999886
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=390.21 Aligned_cols=259 Identities=25% Similarity=0.477 Sum_probs=224.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCC---cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAG---EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
...++.++||.|.||.||+|+.+..+ ..||||.++. ...++.+.+|..|+.||.+..||||+++.|++.....++
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~--GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA--GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeecc--CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence 34566789999999999999997655 4699999964 345677889999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
||+|||++|+|+.||+.... .+++.+...|.++||.||+||.+. ++|||||.++|||++.+..+|
T Consensus 707 IiTEyMENGsLDsFLR~~DG------------qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDG------------QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCC------------ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEE
Confidence 99999999999999998764 488999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceeccccc--CcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAG--SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
++|||+++.+.++. ....+...| ..+|.|||.+...+++.+|||||||++|||.++ |..||+.....+
T Consensus 772 VsDFGLSRvledd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------- 842 (996)
T KOG0196|consen 772 VSDFGLSRVLEDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------- 842 (996)
T ss_pred eccccceeecccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--------
Confidence 99999999876543 222223333 579999999999999999999999999999888 667777654433
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
+...++.+.+.+.+++++..+++||..||++|-.+||.++||+..|+++-.
T Consensus 843 ------VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 843 ------VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ------HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 334455666778889999999999999999999999999999999999863
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=339.27 Aligned_cols=271 Identities=24% Similarity=0.340 Sum_probs=226.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||.|+||.|..++.+.+|..+|+|++.+......+..+...+|..+++.+.||.++++++.+.+....|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 56889999999999999999999999999999999887777778888999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++||.|..++++.++ ++.+.++-+|.||+.|++|||+. +|++||+||+|||+|++|.+||.
T Consensus 123 meyv~GGElFS~Lrk~~r-------------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKit 186 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-------------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKIT 186 (355)
T ss_pred EeccCCccHHHHHHhcCC-------------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEE
Confidence 999999999999997665 89999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||.|+..... .-..+|||.|+|||.+....|..++|.|||||++|||+.|..||+........+.+ .+.+
T Consensus 187 DFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI----~~~~ 257 (355)
T KOG0616|consen 187 DFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKI----LEGK 257 (355)
T ss_pred eccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHH----HhCc
Confidence 99999987432 33468999999999999999999999999999999999999999877653333222 1111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcc-cCCCCCCCCCcCccccccc
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKK-MGRDVDSAPLLGTAGYLFG 1008 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 1008 (1024)
. ..+.-...++.+|+...++.|-.+ ++|.-+ ...++..||.|+ +++|.
T Consensus 258 ---------v--~fP~~fs~~~kdLl~~LL~vD~t~------------------R~gnlknG~~dIk~H~wF~--~v~W~ 306 (355)
T KOG0616|consen 258 ---------V--KFPSYFSSDAKDLLKKLLQVDLTK------------------RFGNLKNGVEDIKNHPWFK--GVDWE 306 (355)
T ss_pred ---------c--cCCcccCHHHHHHHHHHHhhhhHh------------------hhcCcCCCccccccCcccc--cccHH
Confidence 1 112222234444555555444444 455554 789999999999 88998
Q ss_pred cccccchh
Q 001706 1009 FKRSKKVA 1016 (1024)
Q Consensus 1009 ~~~~~~~~ 1016 (1024)
....|+.+
T Consensus 307 ~i~~r~ie 314 (355)
T KOG0616|consen 307 AILQRKIE 314 (355)
T ss_pred HHhhcccc
Confidence 76665544
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=373.19 Aligned_cols=262 Identities=29% Similarity=0.376 Sum_probs=213.9
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+++...++||+|+||+||+|.+.+ .||||++..+.- .++..+.|+.|+.++++-+|.||+-|.|||..++. .||
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 3456778899999999999999964 499999966544 34468999999999999999999999999998877 999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+.||+|.+|+.++|..+ ..++..+.+.||.|||+||.|||.+ +|+|||||..||++.++++|||+
T Consensus 466 TqwCeGsSLY~hlHv~e------------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIg 530 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQE------------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIG 530 (678)
T ss_pred ehhccCchhhhhccchh------------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEe
Confidence 99999999999999765 3588899999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC---CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|||++..-.............|...|||||+++.. +|++++||||||+|+|||++|..||.........-.+-+.+.
T Consensus 531 DFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l 610 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL 610 (678)
T ss_pred cccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc
Confidence 99999765444333334455688899999999854 689999999999999999999999974322211111111100
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.. ........+++++.+|+..||..++++||.+.+|+..|+.+.+
T Consensus 611 ~p----------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 611 MP----------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred Cc----------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 00 0112234566799999999999999999999999998888875
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-44 Score=369.27 Aligned_cols=438 Identities=28% Similarity=0.442 Sum_probs=351.4
Q ss_pred CCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEec
Q 001706 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGL 200 (1024)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 200 (1024)
..|+.|++++|.+. .+-..+.++..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|..++.+.+|.+|++
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 45667777777766 44456677777777777777777 67777777777777777777777 67777777777777777
Q ss_pred ccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccC
Q 001706 201 AYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (1024)
Q Consensus 201 s~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (1024)
++|. ...+|+.++.+..|+.|+..+|+++ ..|..++++.+|..|++.+|+++
T Consensus 122 s~n~---------------------------~~el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~ 173 (565)
T KOG0472|consen 122 SSNE---------------------------LKELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK 173 (565)
T ss_pred cccc---------------------------eeecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh
Confidence 7664 2345666777777778888888887 67777888888888888888888
Q ss_pred CCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccc-c
Q 001706 281 GEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI-G 359 (1024)
Q Consensus 281 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~ 359 (1024)
..+|.......|++||.-+|-++ .+|..++.+.+|..|+|..|+|. .+| .|.++..|++|+++.|+|+ .+|.+. .
T Consensus 174 ~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~ 249 (565)
T KOG0472|consen 174 ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLK 249 (565)
T ss_pred hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhc
Confidence 77777777667888888888887 78888999999999999999998 677 8889999999999999998 556555 4
Q ss_pred CCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCcc---------------
Q 001706 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG--------------- 424 (1024)
Q Consensus 360 ~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--------------- 424 (1024)
++++|..|||.+|+++ ..|+.+|-+.+|.+|++++|.++ .+|.+++++ .|+.|.+.+|.+..
T Consensus 250 ~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLK 326 (565)
T KOG0472|consen 250 HLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLK 326 (565)
T ss_pred ccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHH
Confidence 8899999999999998 88999999999999999999988 567789999 99999999997652
Q ss_pred ----------------------CCCc----cccccccccccccccCcccCCCCcccc-----cCCCEEEcccCcCCCCcc
Q 001706 425 ----------------------ELPT----GLWTTFNLSSLMLSDNTISGELPSKTA-----WNLTRLEISNNRFSGQIQ 473 (1024)
Q Consensus 425 ----------------------~~p~----~~~~l~~L~~L~Ls~N~i~~~~p~~~~-----~~L~~L~Ls~N~l~~~~~ 473 (1024)
..|. ......+.+.|++++=+++ .+|...+ .-.+..+++.|++. ++|
T Consensus 327 yLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elP 404 (565)
T KOG0472|consen 327 YLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELP 404 (565)
T ss_pred HHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhh
Confidence 0011 1123446778888888887 6666432 13678999999999 677
Q ss_pred cccCCccccc-eeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhcc
Q 001706 474 RGVGSWKNLI-VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL 552 (1024)
Q Consensus 474 ~~~~~~~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~ 552 (1024)
..+..++.+. .+.+++|.++ .+|..++.+++|..|+|++|-+. .+|.+++.+..|+.||+|.|+|. .+|..+..+.
T Consensus 405 k~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq 481 (565)
T KOG0472|consen 405 KRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQ 481 (565)
T ss_pred hhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHH
Confidence 7777777654 4667777776 89999999999999999999997 89999999999999999999998 9999999999
Q ss_pred ccceecccCCcCCCCCCCc-cccc-ccccccccCCccccCCCccccccccCCc
Q 001706 553 VMVSLDLSGNQFSGEIPPE-IGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDS 603 (1024)
Q Consensus 553 ~L~~L~ls~N~l~g~ip~~-~~~l-~l~~l~l~~N~l~g~~p~~~~~~~~~~~ 603 (1024)
.|+.+-.++||+. .+|++ ++.+ .|.+|||.+|.+. .||+.+++++....
T Consensus 482 ~lEtllas~nqi~-~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~h 532 (565)
T KOG0472|consen 482 TLETLLASNNQIG-SVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRH 532 (565)
T ss_pred HHHHHHhcccccc-ccChHHhhhhhhcceeccCCCchh-hCChhhccccceeE
Confidence 9999999999997 56655 8888 4999999999998 79999998876544
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=371.64 Aligned_cols=273 Identities=23% Similarity=0.366 Sum_probs=233.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 768 (1024)
+++|...++||+|+||+|+++..+.+++.+|||++++......+..+..+.|.+|+... +||.++.++++|+...+.|.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 56788899999999999999999999999999999988877777789999999999988 59999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+.||++..+.+. ..+++..+.-+|..|+.||.|||++ +|+|||||.+|||+|.+|.+||
T Consensus 447 vmey~~Ggdm~~~~~~--------------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT--------------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred EEEecCCCcEEEEEec--------------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEe
Confidence 9999999995544432 4589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||+++.-.. .....+..+|||.|||||++.+..|+.+.|.|||||+||||+.|..||.++++.++.+.+.. .
T Consensus 510 ADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~----d 583 (694)
T KOG0694|consen 510 ADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN----D 583 (694)
T ss_pred cccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc----C
Confidence 99999986432 22355678999999999999999999999999999999999999999999887766654422 1
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCccccccc
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFG 1008 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1024)
. ..++.-.+.+...+|++++..+|++|..+. +.++.+++.||||+ .++|.
T Consensus 584 ~-----------~~yP~~ls~ea~~il~~ll~k~p~kRLG~~-----------------e~d~~~i~~hpFFr--~i~w~ 633 (694)
T KOG0694|consen 584 E-----------VRYPRFLSKEAIAIMRRLLRKNPEKRLGSG-----------------ERDAEDIKKHPFFR--SIDWD 633 (694)
T ss_pred C-----------CCCCCcccHHHHHHHHHHhccCcccccCCC-----------------CCCchhhhhCCccc--cCCHH
Confidence 1 123344457888999999999999996432 45678899999999 67788
Q ss_pred cccccch
Q 001706 1009 FKRSKKV 1015 (1024)
Q Consensus 1009 ~~~~~~~ 1015 (1024)
....|+.
T Consensus 634 ~L~~r~i 640 (694)
T KOG0694|consen 634 DLLNRRI 640 (694)
T ss_pred HHhhccC
Confidence 6655443
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=357.20 Aligned_cols=276 Identities=21% Similarity=0.287 Sum_probs=222.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||.|+-+.+|..+|+|++++..-......+.+..|-.+|....+|+||++|..|++..+.|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 57899999999999999999999999999999999877655666678899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++||++..+|.... .+++..++..+.+.+.|++-+|+. |++||||||+|+|+|..|++||+
T Consensus 220 MEylPGGD~mTLL~~~~-------------~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD-------------TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred EEecCCccHHHHHHhcC-------------cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeec
Confidence 99999999999998755 489999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccC----------------------CCC-----c------------------eecccccCcccCchhhccCC
Q 001706 850 DFGLAKMLAKQ----------------------GEP-----H------------------TMSAVAGSFGYFAPEYAYTT 884 (1024)
Q Consensus 850 DFgla~~~~~~----------------------~~~-----~------------------~~~~~~gt~~y~aPE~~~~~ 884 (1024)
|||++.-+... +.. . ..-..+|||-|||||++.+.
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k 363 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK 363 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC
Confidence 99998533210 000 0 00123699999999999999
Q ss_pred CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCC
Q 001706 885 KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPS 964 (1024)
Q Consensus 885 ~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 964 (1024)
.|+..+|+||+|||+|||+.|-+||.++.+......+...... +..+...+...+..++|.+|+. ||+
T Consensus 364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-----------l~fP~~~~~s~eA~DLI~rll~-d~~ 431 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-----------LKFPEEVDLSDEAKDLITRLLC-DPE 431 (550)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-----------ccCCCcCcccHHHHHHHHHHhc-CHH
Confidence 9999999999999999999999999988776655444321111 1111122223567778888877 777
Q ss_pred CCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCccccccccccccc
Q 001706 965 SRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFKRSKK 1014 (1024)
Q Consensus 965 ~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1024)
+|.. .....++..||+|+ +++|.-.+..+
T Consensus 432 ~RLG-------------------~~G~~EIK~HPfF~--~v~W~~l~~~~ 460 (550)
T KOG0605|consen 432 NRLG-------------------SKGAEEIKKHPFFK--GVDWDHLREMP 460 (550)
T ss_pred HhcC-------------------cccHHHHhcCCccc--cCCcchhhcCC
Confidence 7743 34455667788887 77777555533
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=362.56 Aligned_cols=249 Identities=26% Similarity=0.366 Sum_probs=217.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|-+.+.||+|+||.||||+.+.+.+.||+|.+.+... +++..+.+.+|++++++++||||+.++++|+...+.++|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 567788899999999999999999999999999976544 3455688999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+.| +|..++..... ++++.+..++.++..||.|||+. +|.|||+||.||+++..|.+|+||
T Consensus 81 e~a~g-~L~~il~~d~~-------------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~Klcd 143 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGK-------------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCD 143 (808)
T ss_pred hhhhh-hHHHHHHhccC-------------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeech
Confidence 99986 99999997654 89999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+|+.+.. .....+...|||.|||||...+..|+..+|+||+||++||+++|++||+......+.+.+. .+.
T Consensus 144 Fg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~----~d~- 216 (808)
T KOG0597|consen 144 FGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSIL----KDP- 216 (808)
T ss_pred hhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh----cCC-
Confidence 999997644 3445567889999999999999999999999999999999999999998765544443332 111
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...+...+..+..++...+.+||.+|.+..+++.
T Consensus 217 ----------v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 ----------VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----------CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1223456678999999999999999999999874
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=358.95 Aligned_cols=268 Identities=23% Similarity=0.291 Sum_probs=216.1
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCC-
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSEN- 764 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~- 764 (1024)
..+.++|+..++||.|.||.||+|+...+++.||||+++..... ..+-.-.||++.+++++ ||||+++.+++.+.+
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 34678899999999999999999999999999999998654332 22345679999999998 999999999999887
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..|+|||||+ .+|++.++.+. ..+++..++.|+.||++||+|+|++ |+.|||+||+|||+....
T Consensus 84 ~L~fVfE~Md-~NLYqLmK~R~------------r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~ 147 (538)
T KOG0661|consen 84 ILYFVFEFMD-CNLYQLMKDRN------------RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGND 147 (538)
T ss_pred eEeeeHHhhh-hhHHHHHhhcC------------CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccc
Confidence 8999999996 89999999875 4699999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhc-cCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA-YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
.+||+|||+|+-+.. ....+.++.|..|+|||++ +.+-|+.+.||||+|||++|+.+-++.|-|..+.+....+-.
T Consensus 148 ~iKiaDFGLARev~S---kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~ 224 (538)
T KOG0661|consen 148 VIKIADFGLAREVRS---KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE 224 (538)
T ss_pred eeEeccccccccccc---CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH
Confidence 999999999997633 3345678899999999975 566889999999999999999999999988765543333322
Q ss_pred Hhhc--------cCCchhhhccCCCC-------cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 924 HYAE--------EKPITDALDKGIAE-------PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 924 ~~~~--------~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.... +..+...+.-.+.. ......+.+..+++.+|+.+||++||||+|+++.
T Consensus 225 VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 225 VLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111 00111111111110 1122256889999999999999999999999873
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=345.26 Aligned_cols=276 Identities=21% Similarity=0.301 Sum_probs=230.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+.|+..+.||.|.-|+||+++..+++..+|+|++.+..-.......+...|-+||+.++||.++.+|+.++.++..++|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 45677789999999999999999999999999999877666666778899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||||+||+|+...++++. ..+++..++.++..|+-||+|||-. |||+|||||+|||+.++|++.|+
T Consensus 156 meyCpGGdL~~LrqkQp~-----------~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLs 221 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPG-----------KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLS 221 (459)
T ss_pred EecCCCccHHHHHhhCCC-----------CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEee
Confidence 999999999999998875 6799999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccc---------------------------------CCC---------------------CceecccccCccc
Q 001706 850 DFGLAKMLAK---------------------------------QGE---------------------PHTMSAVAGSFGY 875 (1024)
Q Consensus 850 DFgla~~~~~---------------------------------~~~---------------------~~~~~~~~gt~~y 875 (1024)
||.++..... ... .......+||-.|
T Consensus 222 DFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEY 301 (459)
T KOG0610|consen 222 DFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEY 301 (459)
T ss_pred eccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccc
Confidence 9998743210 000 0112345799999
Q ss_pred CchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHH
Q 001706 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLA 955 (1024)
Q Consensus 876 ~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 955 (1024)
.|||++.+..++.+.|+|+|||++|||+.|..||.+.........+ +.+....+.....+..+.+||
T Consensus 302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NI-------------v~~~l~Fp~~~~vs~~akDLI 368 (459)
T KOG0610|consen 302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNI-------------VGQPLKFPEEPEVSSAAKDLI 368 (459)
T ss_pred ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHH-------------hcCCCcCCCCCcchhHHHHHH
Confidence 9999999999999999999999999999999999987654433322 222222233334556777788
Q ss_pred HHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCccccccccccc
Q 001706 956 LICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFKRS 1012 (1024)
Q Consensus 956 ~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1024)
++.+.+||.+| .|.++.+.++++||||+ |+.|+..|-
T Consensus 369 r~LLvKdP~kR------------------lg~~rGA~eIK~HpFF~--gVnWaLir~ 405 (459)
T KOG0610|consen 369 RKLLVKDPSKR------------------LGSKRGAAEIKRHPFFE--GVNWALIRC 405 (459)
T ss_pred HHHhccChhhh------------------hccccchHHhhcCcccc--CCChhheec
Confidence 88888887766 56677888999999999 999996665
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=353.80 Aligned_cols=297 Identities=27% Similarity=0.361 Sum_probs=226.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKL 767 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 767 (1024)
.+.|+..++||+|.||.||+|++..+|+.||+|+++.+.. .+.....+.|||.||++|+||||+++.+.+.+. +..|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 4567788999999999999999999999999999965543 234457789999999999999999999988776 7899
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+|+|||+ -+|.-++.... -.++..++..++.|++.||+|+|.. +|+|||||.+|||+|.+|.+|
T Consensus 195 lVFeYMd-hDL~GLl~~p~------------vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LK 258 (560)
T KOG0600|consen 195 LVFEYMD-HDLSGLLSSPG------------VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLK 258 (560)
T ss_pred EEEeccc-chhhhhhcCCC------------cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEE
Confidence 9999997 47777776533 2589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|+|||+|+++... .....+..+.|..|+|||.+.+. .|+.+.|+||.||||.||++|++.+.+..+.+....+.+..-
T Consensus 259 iaDFGLAr~y~~~-~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG 337 (560)
T KOG0600|consen 259 IADFGLARFYTPS-GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG 337 (560)
T ss_pred eccccceeeccCC-CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC
Confidence 9999999988554 33446778889999999988875 799999999999999999999999988776655544433221
Q ss_pred cc----CCchhhhccCC-CC--c-------ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCC
Q 001706 927 EE----KPITDALDKGI-AE--P-------CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGR 992 (1024)
Q Consensus 927 ~~----~~~~~~~~~~~-~~--~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~ 992 (1024)
.. ++..+...... .. + .....+....+|+..++..||.+|.|+.++++. +.+..+....
T Consensus 338 SP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s-------eyF~t~p~~~ 410 (560)
T KOG0600|consen 338 SPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS-------EYFTTEPLPC 410 (560)
T ss_pred CCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC-------cccccCCCCC
Confidence 11 11011110000 00 0 111224667889999999999999999998751 2233333344
Q ss_pred CCCCCCCcCcccccccccc
Q 001706 993 DVDSAPLLGTAGYLFGFKR 1011 (1024)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~ 1011 (1024)
+...-|.+......+.++|
T Consensus 411 ~p~~Lp~y~~s~E~~~K~r 429 (560)
T KOG0600|consen 411 DPSSLPKYPPSHELDAKRR 429 (560)
T ss_pred CcccCCCCCcchhHHHHHH
Confidence 4455555555555444333
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=343.47 Aligned_cols=271 Identities=24% Similarity=0.337 Sum_probs=220.2
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+.|+..+.||.|..++||+|+....++.||||++.-+.- ....+.+.+|+..++.++||||++++.+|..+...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 5679999999999999999999999999999999965433 23368999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|+||.+|++.+.++..-+ ..+++..+..|.+++++||.|||.+ |.+|||||+.|||++++|.|||+
T Consensus 103 mpfMa~GS~ldIik~~~~-----------~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLa 168 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYP-----------DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLA 168 (516)
T ss_pred ehhhcCCcHHHHHHHHcc-----------ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEc
Confidence 999999999999986543 4589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCcee--cccccCcccCchhhccC--CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 850 DFGLAKMLAKQGEPHTM--SAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|||.+..+...+..... ....||+.|||||+++. ..|+.|+||||||++..|+.+|..||..-.+.. ......
T Consensus 169 dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk---vLl~tL 245 (516)
T KOG0582|consen 169 DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK---VLLLTL 245 (516)
T ss_pred CceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH---HHHHHh
Confidence 99998766555432221 45689999999999654 368999999999999999999999997544322 222222
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcCC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCCP 981 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 981 (1024)
....+... -.....+........+.+++..|+++||.+|||++++++ .++++..
T Consensus 246 qn~pp~~~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 246 QNDPPTLL--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCCCCCcc--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 22222111 122233334445568999999999999999999999984 5555543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=325.37 Aligned_cols=278 Identities=22% Similarity=0.349 Sum_probs=220.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|...+++|+|.||.||+|++..+|+.||||+++.... .+.......||++.++.++||||+.++++|...+...+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 467778999999999999999999999999999975432 2333567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||+ .+|+..++.... .+...++..++.++++|++|||++ .|+||||||.|+|++++|.+||+|
T Consensus 81 Efm~-tdLe~vIkd~~i------------~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiAD 144 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKNI------------ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIAD 144 (318)
T ss_pred Eecc-ccHHHHhccccc------------ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeec
Confidence 9997 899999987653 578889999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc-
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE- 928 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 928 (1024)
||+|+.+........ ..+.|..|+|||.+.+. .|+...||||.|||+.||+.|.+-|.++.+.+....+.+..-..
T Consensus 145 FGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~ 222 (318)
T KOG0659|consen 145 FGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPT 222 (318)
T ss_pred ccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCC
Confidence 999999865443333 34789999999998875 68999999999999999999987777766555444443322111
Q ss_pred -------CCchhhhccC-----CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcCCCCCcCCc
Q 001706 929 -------KPITDALDKG-----IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCCPTENYGGK 988 (1024)
Q Consensus 929 -------~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~~~~~~~ 988 (1024)
..+.+...-. ........+..+..+++.+++..||.+|++++|+++ .+.. .|....+++
T Consensus 223 ~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~-~P~pt~~~~ 295 (318)
T KOG0659|consen 223 PDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS-LPLPTPPSK 295 (318)
T ss_pred cccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc-CCCCCChhh
Confidence 1111111111 111133445677899999999999999999999985 3444 344444333
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=359.33 Aligned_cols=247 Identities=29% Similarity=0.427 Sum_probs=212.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+...+.+-+|.|+.|.||+|++. ++.||||+++. .-..+|+.|++|+||||+.|.|+|.....++|||
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM 191 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM 191 (904)
T ss_pred HHhhhhhhhccCcccceeeeecc--CceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence 34556678999999999999985 78899998832 2235788999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||+.|-|+..|+... .+.......|..+||.||.|||.+ .|||||||.-||||+.+..|||+|
T Consensus 192 EfCa~GqL~~VLka~~-------------~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKAGR-------------PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred eccccccHHHHHhccC-------------ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEecc
Confidence 9999999999999754 377788889999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||-++...+ ..++..+.||..|||||+++..+.++|.||||||||||||+||..||..-+... -
T Consensus 256 FGTS~e~~~---~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-------------I 319 (904)
T KOG4721|consen 256 FGTSKELSD---KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-------------I 319 (904)
T ss_pred ccchHhhhh---hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-------------e
Confidence 999987643 245667899999999999999999999999999999999999999986543221 1
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
+..+-...+..+.+..++.-+.-|++.||+..|..||+|++++..|+-+.|
T Consensus 320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 222223334556677788899999999999999999999999999987765
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=345.49 Aligned_cols=319 Identities=24% Similarity=0.302 Sum_probs=223.8
Q ss_pred chhhHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCCcccccccccCcchhHhhhCCCccceeeecCcEEEEEEEEcCC
Q 001706 636 HLALILVLAILVLLVTVSLSWFVVRDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGA 715 (1024)
Q Consensus 636 ~~~~ii~~~~~~~lv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~ 715 (1024)
..+++....+++++++++.+++++|.++-.+...++......+.....-.+-.-....+..++||+|.||.||||...
T Consensus 155 ~~al~~~~~v~~l~~lvi~~~~~~r~~k~~~~~~e~~~~p~~d~~~~~sspl~~l~pl~l~eli~~Grfg~V~KaqL~-- 232 (534)
T KOG3653|consen 155 IYALIPLLLVSLLAALVILAFLGYRQRKNAREEIEPVLIPLEDSGPAPSSPLLELDPLQLLELIGRGRFGCVWKAQLD-- 232 (534)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCccCcccCCCCCCCCCcccccCCchhhHHHhhcCccceeehhhcc--
Confidence 334444444555555555666666544332221112111111111111111122455677789999999999999985
Q ss_pred CcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc--ccCceeeEEEEEecCC----ceEEEEeccCCCCHHHHhccCcccc
Q 001706 716 GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI--RHANIVKLWCCISSEN----SKLLVYEYMENQSLDRWLHGRKRSL 789 (1024)
Q Consensus 716 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~ 789 (1024)
++.||||++.. +..+.|+.|-+|++.. +|+||++|+++-.... .++||+||.+.|+|.+||+.
T Consensus 233 ~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~----- 301 (534)
T KOG3653|consen 233 NRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA----- 301 (534)
T ss_pred CceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHh-----
Confidence 68999999843 3457888888888864 8999999998765444 78999999999999999985
Q ss_pred ccCCCCcccccCChHHHHHHHHHHHhhhcccccc------CCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCC
Q 001706 790 VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD------CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863 (1024)
Q Consensus 790 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~ 863 (1024)
..++|....+|+..+++||+|||+. .+++|+|||||++|||+..|++..|+|||+|..+......
T Consensus 302 ---------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~ 372 (534)
T KOG3653|consen 302 ---------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ 372 (534)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC
Confidence 4599999999999999999999975 3678999999999999999999999999999988765544
Q ss_pred ceecccccCcccCchhhccCCCC-C-----CCCcchhHHHHHHHHHhCCCCCCCCCC--cch-----------HHHHHHH
Q 001706 864 HTMSAVAGSFGYFAPEYAYTTKV-N-----EKIDIYSFGVVLLELVTGKEANYGDEH--TSL-----------AEWAWRH 924 (1024)
Q Consensus 864 ~~~~~~~gt~~y~aPE~~~~~~~-~-----~~sDvwslGvil~el~tg~~p~~~~~~--~~~-----------~~~~~~~ 924 (1024)
...-..+||.+|||||++.+.-. . .+.||||+|.|||||++++..++.+.. ..+ .+..+..
T Consensus 373 ~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~ 452 (534)
T KOG3653|consen 373 GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQEL 452 (534)
T ss_pred cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHH
Confidence 44455889999999999987532 2 368999999999999999866542111 110 1111111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
+...+.-..+.+ ... .-..+..+.+.+..||..||+.|.|+.=+.+++.++.
T Consensus 453 VV~kK~RP~~p~-~W~---~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 453 VVRKKQRPKIPD-AWR---KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHhhccCCCChh-hhh---cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 111111000101 011 1123467889999999999999999999999988886
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=363.88 Aligned_cols=261 Identities=26% Similarity=0.387 Sum_probs=217.0
Q ss_pred CCccceeeecCcEEEEEEEEcCCCc---E-EEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGE---F-VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~---~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
....++||+|+||.||+|.....+. . ||||..+.+.........+|.+|+++|+.++|||||++||++.++...|+
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3445899999999999998865322 3 89999876555566778999999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|||+|+||+|.+||++.+. .++..++..++.++|.||+|||++ +++||||.++|+|++.++.+||
T Consensus 239 vmEl~~gGsL~~~L~k~~~------------~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKK------------SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EEEecCCCcHHHHHHhCCC------------CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 9999999999999998663 488999999999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCCceec-ccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 849 ADFGLAKMLAKQGEPHTMS-AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
+|||+++.-. ...... ...-..+|+|||.+..+.|++++|||||||++||+++ |..||.+....+...++.
T Consensus 304 SDFGLs~~~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~---- 376 (474)
T KOG0194|consen 304 SDFGLSRAGS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV---- 376 (474)
T ss_pred CccccccCCc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----
Confidence 9999987532 111111 2235679999999999999999999999999999999 778887766554443331
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTEN 984 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 984 (1024)
..+.+.+.+...+..+..++..||..||+.||+|.++.+.++.+.....
T Consensus 377 ---------~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 377 ---------KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ---------hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1222333444566888999999999999999999999999988875544
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=386.08 Aligned_cols=264 Identities=25% Similarity=0.363 Sum_probs=215.8
Q ss_pred CCccceeeecCcEEEEEEEEcCCCc-----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGE-----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
.+..+.||+|+||.||+|...+... .||||.++.. .+.+...+|.+|..+|+.++|||||+++|.+-+.+..+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 4456789999999999998854332 4899988543 34566789999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+++|||++|+|..||++.+..... ...+...+.+.++.|||+|+.||+++ ++|||||.++|+|+++...||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~------~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQ------PSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCC------CCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEE
Confidence 999999999999999987543211 35688899999999999999999999 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCC-CCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD-EHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~-~~~~~~~~~~~~~~ 926 (1024)
|+|||+|+.+.+.+.+.......-..+|||||.+..+.++.|+|||||||++||++|.+.++++. ...++..
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------- 915 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------- 915 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH-------
Confidence 99999999665543333322223346899999999999999999999999999999966655544 3222211
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.....+ +.+.+..++..++++|..||+.+|++||+++.+++.+.++.+
T Consensus 916 ------~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 916 ------DVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred ------HHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 122222 455677788999999999999999999999999998887764
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=346.93 Aligned_cols=264 Identities=25% Similarity=0.371 Sum_probs=217.6
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
+...++||+|.||.|..++... +..||||.++.... ...+.+|.+|+++|.+++||||++++++|..++.+++|+||
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred eehhhhhcCcccceeEEEEecC-ceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 4456889999999999999863 68999999976543 45578999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
|++|+|..|+.++... ...-+...+|+.|||+||+||.+. ++||||+.++|+|+|+++++||+|||
T Consensus 617 mEnGDLnqFl~aheap-----------t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfg 682 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELP-----------TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFG 682 (807)
T ss_pred HhcCcHHHHHHhccCc-----------ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcc
Confidence 9999999999987542 133345567999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh--CCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT--GKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
+++-+..++.+......+-..+|||||.+..++++.++|||+||+++||+++ ...||....+.+..+...........
T Consensus 683 msR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~ 762 (807)
T KOG1094|consen 683 MSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR 762 (807)
T ss_pred cccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc
Confidence 9997766555555555667789999999999999999999999999999876 56787765555544444333222211
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
. .-...+.-++..++++|.+||+.|-++||++.++...|++..
T Consensus 763 ~-------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 763 Q-------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred c-------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1 112334556789999999999999999999999999988753
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=346.32 Aligned_cols=260 Identities=28% Similarity=0.355 Sum_probs=206.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC--ceEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--SKLL 768 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~l 768 (1024)
.+|...+.||+|+||+||++....+|+..|||.+..... .. .+.+.+|++++++++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 457778899999999999999988899999998854421 11 677999999999999999999999854444 6899
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-CCcEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAK 847 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~k 847 (1024)
+|||+++|+|.+++...+. .+++..+...+.||++||+|||++ ||+||||||+|||++. ++.+|
T Consensus 94 ~mEy~~~GsL~~~~~~~g~------------~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~K 158 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG------------KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVK 158 (313)
T ss_pred eeeccCCCcHHHHHHHcCC------------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEE
Confidence 9999999999999997652 389999999999999999999998 9999999999999999 79999
Q ss_pred Eeccccceeccc-CCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 848 IADFGLAKMLAK-QGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|+|||+++.... ...........||+.|||||++..+ ...+++||||+||++.||+||..||... .....+.....
T Consensus 159 laDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig 236 (313)
T KOG0198|consen 159 LADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIG 236 (313)
T ss_pred eccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHh
Confidence 999999987653 1122334457899999999999964 3446999999999999999999998753 11111111111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
... .. ...+...+.+..+++.+|+..||++||||+++++.---..
T Consensus 237 ~~~-~~---------P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 237 RED-SL---------PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred ccC-CC---------CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 111 11 1122234467889999999999999999999997554443
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=361.59 Aligned_cols=273 Identities=22% Similarity=0.370 Sum_probs=209.1
Q ss_pred hCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC-
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE- 763 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~- 763 (1024)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .....+.+.+|+++++.+ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 57888999999999999999752 345689999986432 223356799999999999 899999999988764
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc-------------------------------------------------CCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS-------------------------------------------------GSS 794 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~-------------------------------------------------~~~ 794 (1024)
+..++||||+++|+|.+++......... ...
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4588999999999999999764321000 000
Q ss_pred CcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcc
Q 001706 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874 (1024)
Q Consensus 795 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~ 874 (1024)
......+++..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...............++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 01124588899999999999999999998 999999999999999999999999999986543322222333456788
Q ss_pred cCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHH
Q 001706 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYR 953 (1024)
Q Consensus 875 y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 953 (1024)
|+|||++.+..++.++|||||||++|||++ |..||.+...... .......... ...+...+..+.+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~---~~~~~~~~~~----------~~~~~~~~~~l~~ 308 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE---FCQRLKDGTR----------MRAPENATPEIYR 308 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH---HHHHHhcCCC----------CCCCCCCCHHHHH
Confidence 999999999999999999999999999997 8888866433211 1111111110 0112233467899
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 954 LALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 954 li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
++.+||+.||++||++.|+++.|+++..
T Consensus 309 li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 309 IMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=355.90 Aligned_cols=252 Identities=27% Similarity=0.334 Sum_probs=210.8
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh--hHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCc
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--NQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENS 765 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 765 (1024)
....|...+.||+|+||+|+.|.+..+++.||+|++...... .....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 356789999999999999999999989999999976543111 1234567779999999998 9999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-C
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-F 844 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~ 844 (1024)
.|+||||+.||+|.+++...+ .+.+..+..++.|+++|++|||++ ||+||||||+||+++.+ +
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g-------------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~ 158 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG-------------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEG 158 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC-------------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCC
Confidence 999999999999999999844 377899999999999999999999 99999999999999999 9
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCC-CC-CCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VN-EKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
++||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...+...+.
T Consensus 159 ~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~ 236 (370)
T KOG0583|consen 159 NLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIR 236 (370)
T ss_pred CEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHh
Confidence 99999999998763 2233455678999999999999977 85 78999999999999999999998755444333221
Q ss_pred HHhhccCCchhhhccCCCCcccHHH-HHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEE-MTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
. ..-. .+... +.++..++.+|+..||.+|+++.|++
T Consensus 237 ~---~~~~------------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 237 K---GEFK------------IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred c---CCcc------------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1 1111 11111 57889999999999999999999998
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=333.70 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=223.6
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
+...+|++.+.+|+|.||.|-+|.....|+.||||.++++...+++..-.+.+|++||+.++||||+.+|++|+..+...
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 45567888899999999999999998899999999998887777777788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||..+|.|+||+.++.. +++...+.++.||.+|+.|+|.+ +++|||||.+|||+|+++++|
T Consensus 130 ivMEYaS~GeLYDYiSer~~-------------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGS-------------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred EEEEecCCccHHHHHHHhcc-------------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCee
Confidence 99999999999999998664 89999999999999999999999 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCC-CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|+|||++-.+.+.. ..+.++|++-|.+||++.+.+| .+..|.||+||+||.++.|..||.+.+...++..+.....
T Consensus 194 IADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY 270 (668)
T KOG0611|consen 194 IADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY 270 (668)
T ss_pred eeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc
Confidence 99999998875432 3456799999999999999988 5789999999999999999999999887666555543222
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
.+. +.+.+..-+|++|+..+|++|.|..+|.....
T Consensus 271 rEP----------------~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 REP----------------ETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred cCC----------------CCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 111 11245667999999999999999999987654
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=346.87 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=205.7
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|+||.||+|....+++.||||.+.............+.+|+++++.++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999999889999999998654333333445688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 ~~~g~L~~~~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg 147 (285)
T cd05631 82 MNGGDLKFHIYNMGN-----------PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLG 147 (285)
T ss_pred cCCCcHHHHHHhhCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCC
Confidence 999999988865332 2488999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
++...... .......||..|+|||++.+..++.++||||+||++|||++|+.||...................
T Consensus 148 ~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 220 (285)
T cd05631 148 LAVQIPEG---ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED---- 220 (285)
T ss_pred CcEEcCCC---CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----
Confidence 99875322 12234578999999999999999999999999999999999999998655433222222211110
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 974 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 974 (1024)
....+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 221 -------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 -------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01122233467889999999999999997 555553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=353.23 Aligned_cols=252 Identities=27% Similarity=0.325 Sum_probs=218.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+.-|+.++.||.|+.|.|-.|++..+|+.+|||++.+.....+.....+.+|+-+|+.+.||||+++|++|++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 44577789999999999999999999999999999877666666667899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
.||+++|.|.+++-..++ +++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+
T Consensus 91 lEyv~gGELFdylv~kG~-------------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIA 154 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGP-------------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIA 154 (786)
T ss_pred EEecCCchhHHHHHhhCC-------------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeee
Confidence 999999999999987764 88899999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCC-CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||+|..-.++ ..-...+|++.|.|||++++.+| +.++||||+|||||.|+||+.||.+++...+...+.++..+
T Consensus 155 DFGMAsLe~~g---klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~- 230 (786)
T KOG0588|consen 155 DFGMASLEVPG---KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE- 230 (786)
T ss_pred ccceeecccCC---ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc-
Confidence 99999764322 23345689999999999999998 56899999999999999999999977655555444333222
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.+...+.+..+|+.+|+..||++|.|++||.+.
T Consensus 231 --------------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 231 --------------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred --------------CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 223344788899999999999999999999874
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=349.62 Aligned_cols=258 Identities=26% Similarity=0.342 Sum_probs=215.3
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
-...|+.-++||+|+.|.||.|....+++.||||++.... +...+-+.+|+.+|+..+|+|||++++.|-..+..++
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence 3456777889999999999999999999999999985432 2335679999999999999999999999888899999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|||||+||+|.|.+... .+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||
T Consensus 348 VMEym~ggsLTDvVt~~--------------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKl 410 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT--------------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKL 410 (550)
T ss_pred EEeecCCCchhhhhhcc--------------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEE
Confidence 99999999999998853 388999999999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||++..+..... ..+..+|||.|||||+.....|+++.||||||++++||+.|.+||.-+.+-. ..+.-...+
T Consensus 411 tDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr---AlyLIa~ng 485 (550)
T KOG0578|consen 411 TDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNG 485 (550)
T ss_pred eeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH---HHHHHhhcC
Confidence 99999988765432 3456789999999999999999999999999999999999999997543321 111111111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 980 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 980 (1024)
.+ ....+...+..+.+++.+|++.||++|++++|+++ .|+.+.
T Consensus 486 ~P---------~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 486 TP---------KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred CC---------CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 11 12234455688999999999999999999999986 454444
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=346.43 Aligned_cols=276 Identities=22% Similarity=0.328 Sum_probs=209.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcC----------------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCcee
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING----------------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 754 (1024)
++|+..+.||+|+||.||+|.+.. .+..||+|.+.... ......++.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 468888999999999999997532 34479999986532 234457899999999999999999
Q ss_pred eEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCC------CCcccccCChHHHHHHHHHHHhhhccccccCCCce
Q 001706 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS------SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQI 828 (1024)
Q Consensus 755 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 828 (1024)
++++++.+.+..++||||+++|+|.+++........... .......++|..+++++.|++.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 999999999999999999999999999975432111100 011224588999999999999999999998 99
Q ss_pred EeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC--C
Q 001706 829 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG--K 906 (1024)
Q Consensus 829 vH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg--~ 906 (1024)
+||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+++ .
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999876443322223334567899999999999999999999999999999974 4
Q ss_pred CCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 907 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 907 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
.||...........+......... ......+..++..+.+++.+||+.||++||++.||.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGR-------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccc-------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 566554433333322221111110 00001122334678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=335.72 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=211.1
Q ss_pred chhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhH-----------HHHHHHHHHHHHHhccccCce
Q 001706 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ-----------KLEKEFIAEIEILGTIRHANI 753 (1024)
Q Consensus 685 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpni 753 (1024)
.....+++|++.+.||+|.||.|-+|+...+++.||||++.+...... ...+.+.+||.+|+++.||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 344567899999999999999999999999999999999864322111 113589999999999999999
Q ss_pred eeEEEEEecC--CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeC
Q 001706 754 VKLWCCISSE--NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 831 (1024)
Q Consensus 754 v~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 831 (1024)
|+++++..+. +..|||+|||..|.+... ... ...+++.++++++.++..||+|||.+ +|+||
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d----------~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHR 234 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPD----------KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHR 234 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccC---CCC----------cccccHHHHHHHHHHHHHHHHHHHhc---Ceecc
Confidence 9999998774 578999999998876421 111 11288999999999999999999999 99999
Q ss_pred CCCCCCEEECCCCcEEEeccccceecccCC---CCceecccccCcccCchhhccCCC----CCCCCcchhHHHHHHHHHh
Q 001706 832 DVKSSNILLDSEFKAKIADFGLAKMLAKQG---EPHTMSAVAGSFGYFAPEYAYTTK----VNEKIDIYSFGVVLLELVT 904 (1024)
Q Consensus 832 Dlk~~Nill~~~~~~kl~DFgla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslGvil~el~t 904 (1024)
||||+|+|++++|+|||+|||.+....... .........|||.|+|||...++. .+.+.||||+||+||.|+.
T Consensus 235 DIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf 314 (576)
T KOG0585|consen 235 DIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF 314 (576)
T ss_pred ccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh
Confidence 999999999999999999999998663321 112233467999999999887743 3568999999999999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 905 GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 905 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
|+.||.++....+.+.+ +...+..+...+..+++.+++++++++||++|.+..+|.....-.
T Consensus 315 G~~PF~~~~~~~l~~KI-------------vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 315 GQLPFFDDFELELFDKI-------------VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred ccCCcccchHHHHHHHH-------------hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 99999887655444333 222233333345567889999999999999999999998655433
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=342.52 Aligned_cols=250 Identities=25% Similarity=0.270 Sum_probs=203.7
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec----CCceEEEEe
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----ENSKLLVYE 771 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e 771 (1024)
...||+|++|.||+|.. +++.||||++...........+.+.+|++++++++||||+++++++.+ ....++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 36799999999999998 588999999976544444446788999999999999999999999876 346899999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++.... .++|....+++.|++.|++|||+.. +++||||||+||+++.++.+||+||
T Consensus 103 y~~~g~L~~~l~~~~-------------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~df 167 (283)
T PHA02988 103 YCTRGYLREVLDKEK-------------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICH 167 (283)
T ss_pred eCCCCcHHHHHhhCC-------------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEccc
Confidence 999999999998643 3789999999999999999999731 7889999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccC--CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.. ...
T Consensus 168 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~---~~~ 239 (283)
T PHA02988 168 GLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN---KNN 239 (283)
T ss_pred chHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---cCC
Confidence 998865322 123467899999999876 6899999999999999999999999976543332222211 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
....+..++..+.+++.+||+.||++||+++|+++.|++..
T Consensus 240 ----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 240 ----------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11112234568999999999999999999999999998763
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=311.59 Aligned_cols=253 Identities=24% Similarity=0.326 Sum_probs=218.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.+|+|.||.||.|+.+.++-.||+|++.+..-.......++.+|+++.+.|+||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 57899999999999999999999999999999999877655556678999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||.++|+++..++..+. ..+++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..|++
T Consensus 101 lEya~~gel~k~L~~~~~-----------~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiA 166 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM-----------KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIA 166 (281)
T ss_pred EEecCCchHHHHHHhccc-----------ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeecc
Confidence 999999999999996553 4588888889999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||.+..-. .......+||.-|.|||...+..++...|+|++|++.||++.|.+||......+....+.+.-
T Consensus 167 dfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~---- 238 (281)
T KOG0580|consen 167 DFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD---- 238 (281)
T ss_pred CCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc----
Confidence 999987542 333445789999999999999999999999999999999999999998766444444332211
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
...+...+....+++.+|+..+|.+|.+..|+++.
T Consensus 239 -----------~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 -----------LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -----------ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 11123334678899999999999999999999864
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=328.55 Aligned_cols=268 Identities=27% Similarity=0.357 Sum_probs=211.7
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhc--cccCceeeEEEEEecCC--
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT--IRHANIVKLWCCISSEN-- 764 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~-- 764 (1024)
+..+.+..+.||+|.||+||+|.+. |+.||||++.... ++.+.+|.++++- ++|+||+.|++....+.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 4556778899999999999999996 7889999994422 4678889999986 49999999998764432
Q ss_pred --ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhcccccc-----CCCceEeCCCCCCC
Q 001706 765 --SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD-----CTPQIIHRDVKSSN 837 (1024)
Q Consensus 765 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlk~~N 837 (1024)
..+||++|.+.|||+|||.. ..++-...++++..+|.||+|||.. -+|.|.|||||++|
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r--------------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN 346 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR--------------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN 346 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh--------------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence 56899999999999999985 3488899999999999999999953 36789999999999
Q ss_pred EEECCCCcEEEeccccceecccCCCC--ceecccccCcccCchhhccCCC----C--CCCCcchhHHHHHHHHHhCC---
Q 001706 838 ILLDSEFKAKIADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTTK----V--NEKIDIYSFGVVLLELVTGK--- 906 (1024)
Q Consensus 838 ill~~~~~~kl~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDvwslGvil~el~tg~--- 906 (1024)
||+..++.+.|+|+|+|..+....+. ......+||.+|||||++...- + -..+||||||.|+||+..+.
T Consensus 347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999887654322 2234568999999999987542 1 23699999999999998753
Q ss_pred -------CCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 907 -------EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 907 -------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.||++--+.+.....++++...+++...++... ...+....+.++|+.||..+|..|-|+--+.+.|.++
T Consensus 427 gi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred CEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 566654433333333444444444443333333 2346678899999999999999999999999999988
Q ss_pred CC
Q 001706 980 CP 981 (1024)
Q Consensus 980 ~~ 981 (1024)
..
T Consensus 504 ~~ 505 (513)
T KOG2052|consen 504 SN 505 (513)
T ss_pred hc
Confidence 74
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=339.03 Aligned_cols=255 Identities=26% Similarity=0.337 Sum_probs=210.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|+..+.||+|+||.||||.+..+++.||+|++..+.. ....+++++|+.++..++++||.++|+.+..+...+++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~--~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc--chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 357777899999999999999999999999999965443 444678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||.||++.+.++.... +++..+.-|++++..|+.|||.+ +.+|||||+.||++..+|.+|++|
T Consensus 91 ey~~gGsv~~lL~~~~~-------------~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~D 154 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI-------------LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLAD 154 (467)
T ss_pred HHhcCcchhhhhccCCC-------------CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEe
Confidence 99999999999986442 46667777899999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||.+..+..... .....+||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+..
T Consensus 155 fgVa~ql~~~~~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-------------- 218 (467)
T KOG0201|consen 155 FGVAGQLTNTVK--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-------------- 218 (467)
T ss_pred cceeeeeechhh--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce--------------
Confidence 999987654322 2256889999999999999999999999999999999999999986544311
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 979 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 979 (1024)
+.-.+.+.........+++.+.+++..|+++||+.||+|+++++ .++.+
T Consensus 219 vlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 219 VLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred EEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 01111111111222245577999999999999999999999984 44443
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=317.48 Aligned_cols=255 Identities=25% Similarity=0.321 Sum_probs=215.4
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
+.++|++.+.||+|.|+.||++....+|+.+|+|++... .......+++.+|++|.+.++||||+++.+.+.+.+..|+
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~-k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhh-hhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 456788889999999999999999999999999987432 2333456889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC---Cc
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE---FK 845 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~ 845 (1024)
|+|+|.|++|..-+-.+ ..+++..+-..+.||+.|+.|+|.. +|||||+||+|+++.+. .-
T Consensus 88 vFe~m~G~dl~~eIV~R-------------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR-------------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred EEecccchHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCc
Confidence 99999999997665533 3477788889999999999999999 99999999999999654 45
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
+|++|||+|..+. .........|||+|||||+++..+|+..+|||+.||+||-++.|+.||++++...+.+.+.+..
T Consensus 152 vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 152 VKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred eeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 9999999998875 2334456789999999999999999999999999999999999999999988777776665433
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. ...++.....++..+++.+|+..||.+|.|+.|.+.
T Consensus 229 yd-----------~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 229 YD-----------YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cC-----------CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 22 122334445577889999999999999999999874
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=348.94 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=215.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
++.+..++||+|+||.|++|.+... ...||||+++.+.... ...+|.+|+.+|.+|+|||++++||.+-+ ...+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 3456668899999999999998542 3469999997654432 57899999999999999999999999987 6788
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+|||.++.|+|.+.|++..+ ..+.......++.|||.||.||..+ ++|||||.++|+++-....||
T Consensus 187 MV~ELaplGSLldrLrka~~-----------~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVK 252 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKK-----------AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVK 252 (1039)
T ss_pred HHhhhcccchHHHHHhhccc-----------cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceee
Confidence 99999999999999998433 4577888899999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccc-cCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCC-CCCCCCCCcchHHHHHHHh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVA-GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK-EANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~-~p~~~~~~~~~~~~~~~~~ 925 (1024)
|+|||+.+-+...++.+.+.... -.+.|+|||.++..+++.++|||+|||++|||+|++ .||.+-....
T Consensus 253 I~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q--------- 323 (1039)
T KOG0199|consen 253 ICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ--------- 323 (1039)
T ss_pred eecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---------
Confidence 99999999998887777776544 467899999999999999999999999999999955 5766644332
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+.+.+|.+-+.+.+..|++++|++|+.||...|++||+|..|.+
T Consensus 324 -----IL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 324 -----ILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred -----HHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 23334445556677888999999999999999999999999974
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=350.84 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=206.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|++..+++.||||++...........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46788899999999999999999989999999998654333334457799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 97 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~ 160 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-------------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVT 160 (329)
T ss_pred EcCCCCChHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEe
Confidence 99999999999997643 377888899999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||.+.........+ ....
T Consensus 161 Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i----~~~~ 231 (329)
T PTZ00263 161 DFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI----LAGR 231 (329)
T ss_pred eccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHH----hcCC
Confidence 99999876332 12346899999999999999999999999999999999999999765433222211 1111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 974 (1024)
. ..+......+.+++.+||+.||++||+ +++++.
T Consensus 232 ---------~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 232 ---------L--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---------c--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 011112356889999999999999996 566653
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=351.18 Aligned_cols=245 Identities=24% Similarity=0.331 Sum_probs=203.3
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
+.||+|+||.||+|....+++.||||+++............+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999899999999997554334444567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 144 (323)
T cd05571 81 ELFFHLSRER-------------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKE 144 (323)
T ss_pred cHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcc
Confidence 9999987543 378999999999999999999998 999999999999999999999999999875
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhc
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1024)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+.. ...
T Consensus 145 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~---~~~------- 212 (323)
T cd05571 145 GISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---EEI------- 212 (323)
T ss_pred cccC--CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc---CCC-------
Confidence 3221 1223345699999999999999999999999999999999999999976554332222211 100
Q ss_pred cCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 937 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
..+.....++.+++.+||+.||++|| ++.++++
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 11122346788999999999999999 7888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=346.91 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=205.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||+|++...........+.+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999999889999999986543333344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~D 144 (291)
T cd05612 81 EYVPGGELFSYLRNSG-------------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTD 144 (291)
T ss_pred eCCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEe
Confidence 9999999999997543 378889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+.. ...
T Consensus 145 fg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~----~~~ 215 (291)
T cd05612 145 FGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA----GKL 215 (291)
T ss_pred cCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----CCc
Confidence 9999865322 1234689999999999999999999999999999999999999987654332222211 110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 974 (1024)
..+......+.+++.+||+.||.+||+ +.|+++
T Consensus 216 -----------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 216 -----------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred -----------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 111122467889999999999999995 666654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=344.51 Aligned_cols=258 Identities=26% Similarity=0.378 Sum_probs=219.7
Q ss_pred CCCccceeeecCcEEEEEEEEcC----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 692 SLTESNLIGSGGSGQVYRIDING----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
..+..+.||+|.||.||+|.... ....||||.-+.+-. ....+.|..|+.+|+.++||||++++|.|.+. ..+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 34556889999999999998742 234689998765433 33468899999999999999999999999765 578
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+|||.++-|.|..|++..+. .++..+...+++||+.||+|||+. ++|||||.++|||+.+...||
T Consensus 467 ivmEL~~~GELr~yLq~nk~------------sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKD------------SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred EEEecccchhHHHHHHhccc------------cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceee
Confidence 99999999999999998764 478888999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
++|||+++.+.++ ..+..+...-.+.|||||.+.-.+++.++|||.|||.+||++. |..||.+-...+
T Consensus 532 LaDFGLSR~~ed~-~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD---------- 600 (974)
T KOG4257|consen 532 LADFGLSRYLEDD-AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD---------- 600 (974)
T ss_pred ecccchhhhcccc-chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------
Confidence 9999999988664 3444444555788999999999999999999999999999887 778998754432
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 982 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 982 (1024)
+-..++.+-+.++++.|++.+|.+|.+||..||.+||.+.|+...|..+.+.
T Consensus 601 ----VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 601 ----VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred ----eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 3444566777889999999999999999999999999999999888777653
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=349.92 Aligned_cols=256 Identities=23% Similarity=0.294 Sum_probs=209.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 68889999999999999999998899999999965443333445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 82 ~~~g~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Df 145 (333)
T cd05600 82 YVPGGDFRTLLNNLG-------------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDF 145 (333)
T ss_pred CCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeC
Confidence 999999999997543 378889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|+++.... ......||+.|+|||++.+..++.++||||+||++|||++|..||...........+... ...
T Consensus 146 g~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~ 216 (333)
T cd05600 146 GLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW----KET 216 (333)
T ss_pred cCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc----ccc
Confidence 99976533 223456899999999999999999999999999999999999999765543322222111 000
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.............+.++.+++.+|+..+|++||++.|+++.
T Consensus 217 ---~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 217 ---LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ---ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000000011234678899999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=354.24 Aligned_cols=273 Identities=23% Similarity=0.342 Sum_probs=209.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
.++|+..+.||+|+||.||+|.... ++..||||+++.... ......+.+|+++++.+ +||||+++++++.+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 4578899999999999999998643 335799999865432 23356789999999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc----------------------------------------------------
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS---------------------------------------------------- 791 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~---------------------------------------------------- 791 (1024)
+..++||||+++|+|.++++........
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999999754321000
Q ss_pred -----CCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCcee
Q 001706 792 -----GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866 (1024)
Q Consensus 792 -----~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~ 866 (1024)
.........+++..+++++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 00001123578899999999999999999998 9999999999999999999999999999876433222222
Q ss_pred cccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccH
Q 001706 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYL 945 (1024)
Q Consensus 867 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1024)
....++..|||||++.+..++.++|||||||++|||++ |+.||............ ... +.....+.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~---~~~----------~~~~~~~~ 338 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM---VKR----------GYQMSRPD 338 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH---HHc----------ccCccCCC
Confidence 23345678999999999999999999999999999997 88888654332211111 111 11111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 946 EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 946 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
..+.++.+++.+||+.||++||++.++++.|+++.
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 22468899999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=339.50 Aligned_cols=271 Identities=28% Similarity=0.465 Sum_probs=215.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCC-----cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAG-----EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|+..+.||+|+||.||+|.....+ ..||+|.+.... .......+.+|+++++.++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 357888999999999999999876544 679999886432 2344567999999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCC---CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
..+++|||+++++|.+++........... .......+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 99999999999999999986533211100 011124588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 920 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~ 920 (1024)
.++.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+....
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999986544332223334456788999999999999999999999999999998 8889876554333222
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
+. .. .....+...+.++.+++.+||+.||++||+++||++.|+++
T Consensus 239 i~----~~----------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IR----SR----------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HH----cC----------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11 11 11122334557899999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=343.99 Aligned_cols=255 Identities=25% Similarity=0.348 Sum_probs=222.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc-eEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS-KLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~l 768 (1024)
.+.|...+.+|+|+||.++.++++.++..|++|.+...... +..++....|+.++++++|||||.+.+.|.+.+. .+|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t-~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT-EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC-chhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 46788899999999999999999999999999999665443 3445689999999999999999999999998888 999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||+|++||++.+.+.++++ ..++++.+..|+.|++.|+.|||+. +|+|||||+.|||++.++.|||
T Consensus 82 vm~Y~eGg~l~~~i~~~k~-----------~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkL 147 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKG-----------VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKL 147 (426)
T ss_pred EEeecCCCCHHHHHHHHhh-----------ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceee
Confidence 9999999999999998774 4588899999999999999999988 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||+|+...... .....+.||+.||+||.+.+.+|..|+||||+||++|||++-+++|.+.+...+...+....
T Consensus 148 gDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--- 222 (426)
T KOG0589|consen 148 GDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--- 222 (426)
T ss_pred cchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc---
Confidence 9999999875432 23456789999999999999999999999999999999999999998877666555443322
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
-.+.+.....++..+|..|++.+|+.||++.+++..
T Consensus 223 -----------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -----------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 223445566889999999999999999999999875
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=354.56 Aligned_cols=272 Identities=22% Similarity=0.342 Sum_probs=208.2
Q ss_pred hhCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
.++|+..+.||+|+||.||+|+. ..++..||||+++.... ....+.+.+|+++++.+ +||||+++++++.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45788899999999999999974 33566899999864332 23356789999999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc-----------------------------------------C----------
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS-----------------------------------------G---------- 792 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----------------------------------------~---------- 792 (1024)
+..++||||+++|+|.++++........ .
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 9999999999999999999764321000 0
Q ss_pred -----------CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCC
Q 001706 793 -----------SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861 (1024)
Q Consensus 793 -----------~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~ 861 (1024)
........++|..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 0000113578999999999999999999998 99999999999999999999999999998764432
Q ss_pred CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCC
Q 001706 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIA 940 (1024)
Q Consensus 862 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1024)
.........++..|+|||.+.+..++.++|||||||++|||++ |..||........ ..+...... .
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~---~~~~~~~~~----------~ 335 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK---FYKMIKEGY----------R 335 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH---HHHHHHhCc----------c
Confidence 2222223345678999999999999999999999999999998 6777754322111 111111111 0
Q ss_pred CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 941 EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 941 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...+...+.++.+++.+||+.||++||+++|+++.|++.
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111112236789999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=352.38 Aligned_cols=257 Identities=27% Similarity=0.365 Sum_probs=221.5
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
+....++||+|+||+||||.+-..++ +||+|++... ...+..+++.+|+-+|.+++|||++|++++|.... ..
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 34557889999999999999865554 6899988443 23455688999999999999999999999997665 88
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
||++||+.|+|.+|++..+. .+--+..+.|..|||+||.|||++ ++|||||.++|||+.+...+|
T Consensus 774 lvtq~mP~G~LlDyvr~hr~------------~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvk 838 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRD------------NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVK 838 (1177)
T ss_pred HHHHhcccchHHHHHHHhhc------------cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEE
Confidence 99999999999999998654 467788899999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|.|||+|+....++..+......-.+.|||=|.+....|+.++|||||||++||++| |..|+++....
T Consensus 839 itdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~----------- 907 (1177)
T KOG1025|consen 839 ITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE----------- 907 (1177)
T ss_pred EEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-----------
Confidence 999999998877766666555556788999999999999999999999999999998 78888764322
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.+.+.+..+-+..+++-++.+++.+|.+||..|++.||+|+++...+.+++
T Consensus 908 ---eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 908 ---EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred ---HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 245556666667788888999999999999999999999999999998876
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=316.36 Aligned_cols=269 Identities=24% Similarity=0.310 Sum_probs=214.4
Q ss_pred cchhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-
Q 001706 684 FTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS- 762 (1024)
Q Consensus 684 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 762 (1024)
+..++-+++|+..++|++|.||.||+|+++.+++.||+|+++.+.... ..--...|||.++.+.+|||||.+-.++..
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 444566788999999999999999999999999999999997765322 222457899999999999999999887654
Q ss_pred -CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 763 -ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 763 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
-+..|+|||||+ -+|...+...+ +.+...++..++.|+++|++|||.. .|+|||||++|+|+.
T Consensus 148 ~~d~iy~VMe~~E-hDLksl~d~m~------------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~ 211 (419)
T KOG0663|consen 148 NMDKIYIVMEYVE-HDLKSLMETMK------------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLS 211 (419)
T ss_pred ccceeeeeHHHHH-hhHHHHHHhcc------------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeec
Confidence 457999999997 68999998766 3588899999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
..|.+||+|||+|+.+... ...++..+.|..|+|||.+.+. .|+++.||||+|||+.||+++++.|.+....+..+.
T Consensus 212 ~~G~lKiaDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~ 289 (419)
T KOG0663|consen 212 HKGILKIADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK 289 (419)
T ss_pred cCCcEEecccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH
Confidence 9999999999999988553 2345667889999999988875 689999999999999999999999988766555544
Q ss_pred HHHHhhccCCchhhhccCC-------------------CCcccHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 921 AWRHYAEEKPITDALDKGI-------------------AEPCYLE-EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+.+..-.. .+...+++ +...... ....-++++...+..||.+|.|+.|.++
T Consensus 290 If~llGtP---te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 290 IFKLLGTP---SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred HHHHhCCC---ccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 43322110 01111110 0000000 2256688999999999999999999875
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=345.05 Aligned_cols=264 Identities=24% Similarity=0.341 Sum_probs=208.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|++.+.||+|+||.||++.+..++..||+|++.... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 57889999999999999999999999999999986432 2344578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... .+++..+..++.|++.|++|||+. .+|+||||||+||+++.++.+||+|
T Consensus 83 e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~D 147 (331)
T cd06649 83 EHMDGGSLDQVLKEAK-------------RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCD 147 (331)
T ss_pred ecCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEcc
Confidence 9999999999997543 378889999999999999999974 1699999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC-
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK- 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 929 (1024)
||++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...+............
T Consensus 148 fg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (331)
T cd06649 148 FGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEE 223 (331)
T ss_pred Cccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccccc
Confidence 9998765322 22345689999999999999999999999999999999999999975543332221111000000
Q ss_pred C----------------------------chhhhc---cC-CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 930 P----------------------------ITDALD---KG-IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 930 ~----------------------------~~~~~~---~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
. ..+..+ .. ...........++.+++.+||+.||++||++.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 000000 00 0000011234678999999999999999999999864
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=345.71 Aligned_cols=243 Identities=23% Similarity=0.283 Sum_probs=199.3
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|+||.||+|.+..+++.||+|++.............+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999988999999998654433444567788999999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 144 (312)
T cd05585 81 FHHLQREG-------------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNM 144 (312)
T ss_pred HHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCc
Confidence 99997543 378899999999999999999998 99999999999999999999999999997543
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.......... ....
T Consensus 145 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~----~~~~--------- 209 (312)
T cd05585 145 KDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI----LQEP--------- 209 (312)
T ss_pred cCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH----HcCC---------
Confidence 221 2233456899999999999999999999999999999999999999765433222211 1110
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPS---MKEVLQ 974 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 974 (1024)
...+......+.+++.+||+.||++||+ +.|++.
T Consensus 210 --~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 210 --LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred --CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 0112223467889999999999999985 455543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=350.03 Aligned_cols=258 Identities=21% Similarity=0.273 Sum_probs=201.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||+||+|....+++.||||++.............+.+|++++..++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999999899999999996544334445577899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 E~~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~D 144 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-------------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSD 144 (363)
T ss_pred cCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEee
Confidence 9999999999997643 388999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCC---------------------------------ceecccccCcccCchhhccCCCCCCCCcchhHHH
Q 001706 851 FGLAKMLAKQGEP---------------------------------HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897 (1024)
Q Consensus 851 Fgla~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv 897 (1024)
||+++.+...... .......||+.|+|||++.+..++.++|||||||
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGv 224 (363)
T cd05628 145 FGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGV 224 (363)
T ss_pred ccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHH
Confidence 9998764321100 0012346999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 001706 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTS--TLPSSRPSMKEVLQI 975 (1024)
Q Consensus 898 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~ 975 (1024)
++|||++|+.||.+.........+... .... . +. .......++.+++.+++. .++..||++.|+++.
T Consensus 225 il~ell~G~~Pf~~~~~~~~~~~i~~~---~~~~-~-----~p--~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 225 IMYEMLIGYPPFCSETPQETYKKVMNW---KETL-I-----FP--PEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcC---cCcc-c-----CC--CcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999999999999876543332222110 0000 0 00 001122456666666443 233456899999763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=319.92 Aligned_cols=271 Identities=27% Similarity=0.340 Sum_probs=213.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-----CCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-----ENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~ 765 (1024)
..|...+.||+|+||.|++|.+..+|+.||||++..... +....++..||+++++.++|+||+.+++.+.. -..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~-~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE-NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh-chHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345557899999999999999999999999999864433 34456789999999999999999999998755 357
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
+|+|+|+| +.+|...++.+. .++..+..-+++|+++|++|+|+. +|+|||+||+|++++.+..
T Consensus 101 vYiV~elM-etDL~~iik~~~-------------~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~ 163 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQ-------------DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCD 163 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCc-------------cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCC
Confidence 89999999 589999998654 388899999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhcc-CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
+||+|||+|+..........++.++.|..|.|||.+. ...|+.+.||||.|||+.||++|+..|.|.+.......+...
T Consensus 164 lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~ 243 (359)
T KOG0660|consen 164 LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILEL 243 (359)
T ss_pred EEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHh
Confidence 9999999999886554455678899999999999765 568999999999999999999999999876654433333221
Q ss_pred hhccCC----------chhhhc---cCCCC---cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 001706 925 YAEEKP----------ITDALD---KGIAE---PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 979 (1024)
Q Consensus 925 ~~~~~~----------~~~~~~---~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 979 (1024)
.....+ ....+. ..-.. ...+...+...+++.+|+..||.+|+|++|+++ .|.+.
T Consensus 244 lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 244 LGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY 316 (359)
T ss_pred cCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence 111100 000000 00000 011123467889999999999999999999986 34444
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=341.95 Aligned_cols=258 Identities=25% Similarity=0.350 Sum_probs=218.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+.+..++||-|.||.||.|.++...-.||||.++.+ .-..++|..|+.+|+.++|||+|+++|+|..+...|||+|
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 456678999999999999999988899999998543 2336899999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
||.+|+|.+|+++..+ ..++--..+.||.||++||+||..+ .++||||.++|.|+.++..|||+||
T Consensus 344 fM~yGNLLdYLRecnr-----------~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNR-----------SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred cccCccHHHHHHHhch-----------hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeecc
Confidence 9999999999998775 3455667789999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCC-CCCCCCCCcchHHHHHHHhhccCC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK-EANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
|+++.+..+. +.......-.+.|.|||.+....++-|+|||+|||+|||+.|.+ .||.+-+...
T Consensus 410 GLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-------------- 474 (1157)
T KOG4278|consen 410 GLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 474 (1157)
T ss_pred chhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH--------------
Confidence 9999874432 11122223357899999999999999999999999999999955 5555544322
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 982 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 982 (1024)
+.+.++.+.+...+..|++.+|++|+.||++.|..||+++|+-+.++.+-..
T Consensus 475 VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 475 VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 3345556666777888889999999999999999999999999999887543
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=346.09 Aligned_cols=245 Identities=24% Similarity=0.338 Sum_probs=202.6
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
+.||+|+||.||++....++..||+|++.............+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999899999999997654434445567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 144 (323)
T cd05595 81 ELFFHLSRER-------------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKE 144 (323)
T ss_pred cHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcc
Confidence 9999887543 378999999999999999999998 999999999999999999999999999875
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhc
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1024)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+.. ...
T Consensus 145 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~---~~~------- 212 (323)
T cd05595 145 GISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM---EEI------- 212 (323)
T ss_pred ccCC--CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC-------
Confidence 3221 1223345789999999999999999999999999999999999999976554332222211 110
Q ss_pred cCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 937 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
..+...+..+.+++.+||+.||++|| ++.++++
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 01122346788999999999999998 7888765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=346.49 Aligned_cols=250 Identities=22% Similarity=0.262 Sum_probs=206.0
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCC-cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAG-EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
..++|+..+.||+|+||.||+|.+...+ ..||+|++...........+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3567999999999999999999876544 689999986544333444567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 108 lv~Ey~~~g~L~~~i~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK-------------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEE
Confidence 9999999999999997644 378899999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
|+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+. .
T Consensus 172 L~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~----~ 242 (340)
T PTZ00426 172 MTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL----E 242 (340)
T ss_pred EecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh----c
Confidence 9999999875321 223568999999999999999999999999999999999999998765432222221 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
.. . ..+......+.+++.+|++.||++|+ +++|+++
T Consensus 243 ~~---------~--~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 243 GI---------I--YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred CC---------C--CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 11 0 01112235678999999999999995 7887765
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=306.76 Aligned_cols=264 Identities=23% Similarity=0.268 Sum_probs=213.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-----CCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-----ENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~ 765 (1024)
++|++.+.+|+|||+.||.++...+++.||+|++.... .+..+..++|++..++++|||+++++++... ...
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 57899999999999999999998899999999996654 3456789999999999999999999877533 335
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.|++++|+..|+|.+.+...+. ....+++.+.++|+.+|++||++||+. .+++.||||||.||++.+++.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~---------kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~ 167 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKI---------KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGL 167 (302)
T ss_pred EEEEeehhccccHHHHHHHHhh---------cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCc
Confidence 8999999999999999987654 234689999999999999999999998 556999999999999999999
Q ss_pred EEEeccccceecccCCCC-------ceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCc
Q 001706 846 AKIADFGLAKMLAKQGEP-------HTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~ 915 (1024)
++++|||.++...-.-.. ........|..|+|||.+. +...++++|||||||+||+|+.|..||....
T Consensus 168 ~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~-- 245 (302)
T KOG2345|consen 168 PVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY-- 245 (302)
T ss_pred eEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh--
Confidence 999999998754321111 1123345789999999876 3457889999999999999999999985321
Q ss_pred chHHHHHHHhhccCCc-hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 916 SLAEWAWRHYAEEKPI-TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 916 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
..+..+ .+.....+..+.....++.+.++++.|++.||.+||++.+++..++..
T Consensus 246 ----------~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 246 ----------QQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----------hcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 122222 222233344444555778999999999999999999999999988765
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=336.18 Aligned_cols=254 Identities=23% Similarity=0.299 Sum_probs=205.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|+..++||+|+||.||++....+++.||||++.............+.+|+++++.++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 37788999999999999999988899999999865433333334567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+||
T Consensus 81 ~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Df 146 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-----------PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDL 146 (285)
T ss_pred ccCCCcHHHHHHhcCc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeC
Confidence 9999999998865432 3488999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|++....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||.+.........+.......
T Consensus 147 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 220 (285)
T cd05605 147 GLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED--- 220 (285)
T ss_pred CCceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc---
Confidence 9998753221 2233468999999999999999999999999999999999999998654433222222211111
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVL 973 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl 973 (1024)
....+...+..+.+++.+||+.||++|| ++++++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~ 259 (285)
T cd05605 221 --------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVK 259 (285)
T ss_pred --------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHh
Confidence 1112233456789999999999999999 555554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=345.45 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=203.1
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
+.||+|+||.||++....+++.||||++.............+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999899999999997654444445678899999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~ 144 (328)
T cd05593 81 ELFFHLSRER-------------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKE 144 (328)
T ss_pred CHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCcc
Confidence 9999887543 388999999999999999999998 999999999999999999999999999875
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhc
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1024)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+......... ....
T Consensus 145 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~---~~~~------- 212 (328)
T cd05593 145 GITD--AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---MEDI------- 212 (328)
T ss_pred CCCc--ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc---cCCc-------
Confidence 3221 222334578999999999999999999999999999999999999997654332222111 0100
Q ss_pred cCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 001706 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQI 975 (1024)
Q Consensus 937 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 975 (1024)
..+.....++.+++.+|++.||++|| ++.|+++.
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 -----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11122346788999999999999997 88888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=342.98 Aligned_cols=244 Identities=21% Similarity=0.288 Sum_probs=196.9
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|....+++.||+|+++..........+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765433444556788999998877 899999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|..++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~~~~~~-------------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~ 144 (329)
T cd05618 81 GDLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccc
Confidence 99999887543 388999999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCC-----CcchHHHHHHHhhccCC
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE-----HTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~ 930 (1024)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+..........
T Consensus 145 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (329)
T cd05618 145 EGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 222 (329)
T ss_pred cccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC
Confidence 532211 12234578999999999999999999999999999999999999995321 11112222222221110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 969 (1024)
..+......+.+++.+||+.||++||++
T Consensus 223 -----------~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 -----------RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -----------CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1122234678899999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=325.41 Aligned_cols=266 Identities=29% Similarity=0.348 Sum_probs=205.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----ce
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-----SK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 766 (1024)
.|...+++|+|+||.||+|....+++.||||++..+.. ---+|+++|+.++|||||++.-+|.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 56778999999999999999998899999999976543 2346899999999999999988775422 33
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-Cc
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FK 845 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~ 845 (1024)
.+|||||+ .+|+++++..... ...++...+.-++.|+++||+|||+. +|+||||||.|+|+|.+ |.
T Consensus 98 nlVleymP-~tL~~~~r~~~~~---------~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~ 164 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRA---------NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGV 164 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhc---------CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCe
Confidence 58999997 7999999853211 23477778888999999999999998 99999999999999987 99
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
+||||||.|+.+..+... ..+..|..|+|||.+.+. .|+.+.||||.|||+.||+-|+..|.|+...+....+.+.
T Consensus 165 LKicDFGSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~ 241 (364)
T KOG0658|consen 165 LKICDFGSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV 241 (364)
T ss_pred EEeccCCcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 999999999988654322 457789999999988875 7999999999999999999999999887655544443332
Q ss_pred hhcc--CCchhh-------hccCCCC-----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 001706 925 YAEE--KPITDA-------LDKGIAE-----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 980 (1024)
Q Consensus 925 ~~~~--~~~~~~-------~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 980 (1024)
+... +.+..+ -.+.+.. -......++.++++.+++..+|.+|.++.|++. .++++.
T Consensus 242 lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 242 LGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred hCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 2110 001000 0011111 122334578999999999999999999999883 455543
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=345.56 Aligned_cols=245 Identities=23% Similarity=0.326 Sum_probs=201.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+|+..+.||+|+||.||+|....+++.||||++...........+.+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 477889999999999999999988999999998755433334455677888888877 5899999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 E~~~~g~L~~~~~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~D 144 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-------------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIAD 144 (323)
T ss_pred cCCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEcc
Confidence 9999999999987543 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+.. ..
T Consensus 145 fG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~----~~- 217 (323)
T cd05616 145 FGMCKENMWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME----HN- 217 (323)
T ss_pred CCCceecCCC--CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh----CC-
Confidence 9998754321 1223345689999999999999999999999999999999999999987654433322211 11
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 969 (1024)
. ..+...+.++.+++.+|++.||++|++.
T Consensus 218 --------~--~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 --------V--AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --------C--CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0 1112234678899999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=342.26 Aligned_cols=261 Identities=22% Similarity=0.345 Sum_probs=208.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
.+|+..+.||+|+||.||+|.+..+++ .||+|++... ......+++.+|+.+++.++||||+++++++... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 468889999999999999998765555 4899988532 2234457799999999999999999999998764 57
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred eeeeecCCCCCHHHHHHhcc------------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcE
Confidence 89999999999999998643 2478889999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++.+.............++..|+|||++.+..++.++|||||||++|||++ |..||.+......... .
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~----~ 224 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI----L 224 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----H
Confidence 9999999987654333222233345678999999999999999999999999999998 8888865433222111 1
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTE 983 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 983 (1024)
.... ..+.+..+..++.+++.+||+.+|++||++.+++..+.++....
T Consensus 225 ~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 225 EKGE----------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred hCCC----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1111 11112223467889999999999999999999999998887543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=333.78 Aligned_cols=257 Identities=23% Similarity=0.344 Sum_probs=207.0
Q ss_pred hCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
.+|+..+.||+|+||.||+|.+. ..+..||+|.++... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 46888899999999999999764 345689999986542 2334567999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++
T Consensus 83 lv~e~~~~~~L~~~l~~~~------------~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE------------GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEE
Confidence 9999999999999997543 2478999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
++|||.+....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||............ .
T Consensus 148 l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~----~ 222 (266)
T cd05064 148 ISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV----E 222 (266)
T ss_pred ECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----H
Confidence 99999876532211 111112335678999999999999999999999999999875 88888765443322222 1
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.. ...+.+...+..+.+++..||+.+|++||+++|+.+.|.++
T Consensus 223 ~~----------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 223 DG----------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC----------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 11112233456789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=345.57 Aligned_cols=245 Identities=23% Similarity=0.320 Sum_probs=200.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcccc-CceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH-ANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~ 770 (1024)
+|+..+.||+|+||.||+|....+++.||||++...........+.+..|+++++.++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788999999999999999998899999999975443334445678899999999976 56888999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 E~~~~g~L~~~~~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~D 144 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-------------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIAD 144 (324)
T ss_pred cCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEee
Confidence 9999999999987543 378889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+. ...
T Consensus 145 fg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~----~~~- 217 (324)
T cd05587 145 FGMCKENIFG--GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM----EHN- 217 (324)
T ss_pred cCcceecCCC--CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----cCC-
Confidence 9998753221 122334578999999999999999999999999999999999999997665433322221 111
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 969 (1024)
...+...+..+.+++.+||..||++|++.
T Consensus 218 ----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ----------VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----------CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 01112233678899999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=336.28 Aligned_cols=252 Identities=35% Similarity=0.517 Sum_probs=197.2
Q ss_pred ccceeeecCcEEEEEEEEc----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 695 ESNLIGSGGSGQVYRIDIN----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 695 ~~~~ig~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..+.||.|.||.||+|... ..+..|+||.+... ......+.+.+|++.+++++||||+++++++...+..++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 3578999999999999987 34678999999542 23344788999999999999999999999999888899999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.++++.... ..+++..+.+|+.||+.||+|||+. +++||||+++||++++++.+||+|
T Consensus 81 e~~~~g~L~~~L~~~~~-----------~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~ 146 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNK-----------EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSD 146 (259)
T ss_dssp E--TTEBHHHHHHHTCT-----------TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEES
T ss_pred ccccccccccccccccc-----------ccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 99999999999997622 3589999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||++....................|+|||.+.+..++.++||||||+++|||++ |+.||...........+ ....
T Consensus 147 f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~----~~~~ 222 (259)
T PF07714_consen 147 FGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL----KQGQ 222 (259)
T ss_dssp TTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH----HTTE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccc
Confidence 999987633222223334456788999999999999999999999999999999 56776554333222222 1111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
....+..++..+++++..||+.||++||++.++++.|
T Consensus 223 ----------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 ----------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112223347799999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=355.30 Aligned_cols=261 Identities=24% Similarity=0.299 Sum_probs=216.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEE-Eec------
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCC-ISS------ 762 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~-~~~------ 762 (1024)
.++++.+.|.+|||+.||.|.+...|..||+|++... ++...+.+.+||++|+.|+ |||||.+++. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3567789999999999999999887799999998543 5677889999999999996 9999999993 211
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...++|.||||+||.|-|++..+.. ..+++.++++|+.|+++|+++||.. .++|+|||||.+|||++.
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq-----------~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQ-----------TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSA 181 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHh-----------ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcC
Confidence 2367899999999999999997664 3599999999999999999999986 788999999999999999
Q ss_pred CCcEEEeccccceecccCCC-Ccee------cccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 843 EFKAKIADFGLAKMLAKQGE-PHTM------SAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~-~~~~------~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
++..||||||.|........ .... -....|+.|+|||.+. +..+++|+||||+||+||-|+....||...
T Consensus 182 ~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 182 DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 99999999999975433221 1110 1134789999999764 678999999999999999999999999764
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTE 983 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 983 (1024)
.. ..++......+.....+..+.+||..||+.||++||++.+|++.+.++..++
T Consensus 262 g~-----------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 262 GK-----------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred cc-----------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 32 2334444444555678889999999999999999999999999988887543
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=338.84 Aligned_cols=244 Identities=25% Similarity=0.376 Sum_probs=197.4
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|....+++.||||+++..........+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999989999999999765433334445666777777754 899999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 g~L~~~~~~~~-------------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~ 144 (316)
T cd05592 81 GDLMFHIQSSG-------------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCe
Confidence 99999987543 378889999999999999999998 99999999999999999999999999997
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+ ....+
T Consensus 145 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i----~~~~~----- 213 (316)
T cd05592 145 ENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSI----LNDRP----- 213 (316)
T ss_pred ECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCC-----
Confidence 643221 2233456899999999999999999999999999999999999999876543222211 11110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK-EVL 973 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 973 (1024)
..+.....++.+++.+||+.||++||++. ++.
T Consensus 214 ------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 214 ------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11122335778999999999999999875 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=340.59 Aligned_cols=243 Identities=21% Similarity=0.282 Sum_probs=196.6
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||||+++..........+.+.+|..+++.+ +||||+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999989999999999765433444456788999999998 799999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 g~L~~~~~~~~-------------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~ 144 (329)
T cd05588 81 GDLMFHMQRQR-------------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccc
Confidence 99999887543 388999999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC-----cchHHHHHHHhhccCC
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH-----TSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~ 930 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+.........
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (329)
T cd05588 145 EGIRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ- 221 (329)
T ss_pred ccccC--CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-
Confidence 53221 1122345789999999999999999999999999999999999999963211 111122222221111
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS 968 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 968 (1024)
.. .+...+..+.+++.+|++.||++||+
T Consensus 222 --------~~--~p~~~~~~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 222 --------IR--IPRSLSVKASSVLKGFLNKDPKERLG 249 (329)
T ss_pred --------CC--CCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 11 11123367889999999999999997
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=342.23 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=199.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHH---hccccCceeeEEEEEecCCceEEE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL---GTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
|++.+.||+|+||.||+|.+..+++.||||+++..........+.+.+|++++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56778999999999999999989999999999754433334456677777665 456799999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|..+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~E~~~~~~L~~~~~~--------------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~ 143 (324)
T cd05589 81 MEYAAGGDLMMHIHT--------------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIA 143 (324)
T ss_pred EcCCCCCcHHHHhhc--------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeC
Confidence 999999999988863 2488999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||+++..... ........|++.|+|||.+.+..++.++|||||||++|||++|+.||.+.+.......+. ...
T Consensus 144 Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~----~~~ 217 (324)
T cd05589 144 DFGLCKEGMGF--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV----NDE 217 (324)
T ss_pred cccCCccCCCC--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCC
Confidence 99998753221 122334678999999999999999999999999999999999999997655433222111 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 974 (1024)
. ..+...+..+.+++.+||+.||++||+ +.++++
T Consensus 218 ~-----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 V-----------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred C-----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 011223467889999999999999994 555543
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=329.57 Aligned_cols=265 Identities=22% Similarity=0.331 Sum_probs=214.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|+...+++.||||.+.............+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999998889999999886544444555678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++...... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|
T Consensus 82 e~~~~~~L~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d 149 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQ---------KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred EecCCCcHHHHHHHhhhc---------cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECc
Confidence 999999999988643221 13478889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||.+..+.... .......+++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ....... .....
T Consensus 150 ~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~~~-~~~~~- 224 (267)
T cd08228 150 LGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLCQK-IEQCD- 224 (267)
T ss_pred cccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHHHH-HhcCC-
Confidence 99988764321 1122346888999999999888999999999999999999999998754322 1111111 11100
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.........+..+.+++.+||+.+|++||++.|+++.++++.
T Consensus 225 --------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 --------YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --------CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 111112234467899999999999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=347.90 Aligned_cols=256 Identities=20% Similarity=0.259 Sum_probs=202.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|+..+.||+|+||+||+|....+++.||||++...........+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 57788999999999999999999999999999965444344556789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 82 ~~~gg~L~~~l~~~~-------------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DF 145 (381)
T cd05626 82 YIPGGDMMSLLIRME-------------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDF 145 (381)
T ss_pred cCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeC
Confidence 999999999997543 378888999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCC---------------------------------------------ceecccccCcccCchhhccCCCC
Q 001706 852 GLAKMLAKQGEP---------------------------------------------HTMSAVAGSFGYFAPEYAYTTKV 886 (1024)
Q Consensus 852 gla~~~~~~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 886 (1024)
|+++.+...... .......||+.|+|||++.+..+
T Consensus 146 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 225 (381)
T cd05626 146 GLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGY 225 (381)
T ss_pred cCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCC
Confidence 998643210000 00123469999999999999999
Q ss_pred CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHH--ccCCCCC
Q 001706 887 NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI--CTSTLPS 964 (1024)
Q Consensus 887 ~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~ 964 (1024)
+.++|||||||++|||++|..||...........+.. ... ....+.......++.+++.+ |+..+|.
T Consensus 226 ~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~---~~~--------~~~~~~~~~~s~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 226 TQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN---WEN--------TLHIPPQVKLSPEAVDLITKLCCSAEERL 294 (381)
T ss_pred CCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc---ccc--------ccCCCCCCCCCHHHHHHHHHHccCccccc
Confidence 9999999999999999999999986554322221110 000 00111111223567788887 5555666
Q ss_pred CCCCHHHHHH
Q 001706 965 SRPSMKEVLQ 974 (1024)
Q Consensus 965 ~RPs~~evl~ 974 (1024)
.||+++|+++
T Consensus 295 ~R~~~~~~l~ 304 (381)
T cd05626 295 GRNGADDIKA 304 (381)
T ss_pred CCCCHHHHhc
Confidence 6999999986
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=342.19 Aligned_cols=398 Identities=21% Similarity=0.234 Sum_probs=263.5
Q ss_pred CCCCCCCCCCcceeeCCCEEEEEeCCCcccccCCccccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCC
Q 001706 57 TSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGP 136 (1024)
Q Consensus 57 ~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 136 (1024)
.+.+++|.-+-..|+...+..++- ..+.|.+|+. -+.|||++|.+...-+..|.++++|+.++|..|.++ .
T Consensus 46 cpa~c~c~~~lldcs~~~lea~~~--~~l~g~lp~~------t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~ 116 (873)
T KOG4194|consen 46 CPATCPCNTRLLDCSDRELEAIDK--SRLKGFLPSQ------TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-R 116 (873)
T ss_pred CCCcCCCCceeeecCccccccccc--cccCCcCccc------eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-h
Confidence 345566766666777665555443 3456666653 477899999988777888888999999999988888 7
Q ss_pred CccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCcccccc
Q 001706 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFG 216 (1024)
Q Consensus 137 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~ 216 (1024)
||...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.|+.+.-..|..-.++++|+|++|++. ..-...|.
T Consensus 117 IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It--~l~~~~F~ 194 (873)
T KOG4194|consen 117 IPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRIT--TLETGHFD 194 (873)
T ss_pred cccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccc--cccccccc
Confidence 7877777777889999999888777778888888888888888888555566777677888888888633 33344555
Q ss_pred ccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhccccccc
Q 001706 217 MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDID 296 (1024)
Q Consensus 217 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~ 296 (1024)
++.+|..|.|+.|.++...+..|.+|++|+.|+|..|+|.-.--..|.++.+|+.|.|..|.|+
T Consensus 195 ~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~---------------- 258 (873)
T KOG4194|consen 195 SLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS---------------- 258 (873)
T ss_pred ccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc----------------
Confidence 6666666666666655555555666666666666666655221334445555555555544444
Q ss_pred CCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCC
Q 001706 297 LSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSG 376 (1024)
Q Consensus 297 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 376 (1024)
..-...|..+.++++|+|+.|+++..-..++.+++.|+.|+|++|.|..+.++......+|++|+|++|+++.
T Consensus 259 -------kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~ 331 (873)
T KOG4194|consen 259 -------KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITR 331 (873)
T ss_pred -------cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccccc
Confidence 3344556667777777777777766666667777777777777777777777777777777777777777763
Q ss_pred CCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccccccCcccCCCCc----
Q 001706 377 PLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPS---- 452 (1024)
Q Consensus 377 ~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~---- 452 (1024)
..+ .+|..++.|++|.|++|++...--..|..+.+|+.|||++|.|++.+-.
T Consensus 332 l~~------------------------~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~ 387 (873)
T KOG4194|consen 332 LDE------------------------GSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVA 387 (873)
T ss_pred CCh------------------------hHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhh
Confidence 333 3455556666666666666533333444556666666666666644432
Q ss_pred -ccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccC
Q 001706 453 -KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDG 513 (1024)
Q Consensus 453 -~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 513 (1024)
...+.|+.|+|.+|+|.....+.|..+.+|++|||.+|-|....|..|..+ +|++|.++.
T Consensus 388 f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 388 FNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred hccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 223456667777777775555667777777777777777766666666666 666665543
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=337.42 Aligned_cols=265 Identities=19% Similarity=0.269 Sum_probs=204.0
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|++.+.||+|+||.||+|++..+++.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 68889999999999999999998999999999865432 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++++.+..+.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Df 144 (287)
T cd07848 81 YVEKNMLELLEEMP-------------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDF 144 (287)
T ss_pred cCCCCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 99987776554321 2478899999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh------
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY------ 925 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~------ 925 (1024)
|++....... ........|++.|+|||++.+..++.++||||+||++|||++|+.||.+.........+....
T Consensus 145 g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07848 145 GFARNLSEGS-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAE 223 (287)
T ss_pred cCcccccccc-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHH
Confidence 9998764321 122234568999999999999999999999999999999999999997654322111111100
Q ss_pred -----hccCCchhhhccCCCC------cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 -----AEEKPITDALDKGIAE------PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 -----~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...........+.... ......+..+.+++.+|++.||++||+++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 224 QMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000000 001113467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=331.16 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=199.4
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|+||.||++....+++.||+|++...........+.+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999989999999998643332223345567799999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~~~~~~~~-----------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~ 146 (277)
T cd05607 81 KYHIYNVGE-----------RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELK 146 (277)
T ss_pred HHHHHhccc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecC
Confidence 998865432 3478899999999999999999998 99999999999999999999999999998764
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
.. .......|+..|+|||++.+..++.++||||+||++|||++|+.||....................
T Consensus 147 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 214 (277)
T cd05607 147 DG---KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE--------- 214 (277)
T ss_pred CC---ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc---------
Confidence 32 122345689999999999999999999999999999999999999875432211111111111100
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
... .....+.++.+++.+||+.||++||+++|+++..
T Consensus 215 ~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 215 VKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 000 0112346789999999999999999998876433
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=345.94 Aligned_cols=256 Identities=23% Similarity=0.299 Sum_probs=205.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|++..+++.||||++.............+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999999899999999996543333444567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|
T Consensus 81 E~~~~g~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 144 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-------------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSD 144 (364)
T ss_pred CCCCCcHHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEee
Confidence 9999999999997543 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCc------------------------------------eecccccCcccCchhhccCCCCCCCCcchh
Q 001706 851 FGLAKMLAKQGEPH------------------------------------TMSAVAGSFGYFAPEYAYTTKVNEKIDIYS 894 (1024)
Q Consensus 851 Fgla~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvws 894 (1024)
||+++.+....... ......||+.|+|||++.+..++.++||||
T Consensus 145 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 224 (364)
T cd05599 145 FGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWS 224 (364)
T ss_pred cccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeec
Confidence 99987643211000 011245899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC---HHH
Q 001706 895 FGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS---MKE 971 (1024)
Q Consensus 895 lGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~e 971 (1024)
|||++|||++|..||...........+. .... ....+.....+..+.+++.+|+. +|.+|++ ++|
T Consensus 225 lG~il~el~~G~~Pf~~~~~~~~~~~i~----~~~~-------~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ 292 (364)
T cd05599 225 LGVIMYEMLVGYPPFCSDNPQETYRKII----NWKE-------TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNE 292 (364)
T ss_pred chhHHHHhhcCCCCCCCCCHHHHHHHHH----cCCC-------ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHH
Confidence 9999999999999997665432222111 1000 00001111223577889999996 9999997 888
Q ss_pred HHH
Q 001706 972 VLQ 974 (1024)
Q Consensus 972 vl~ 974 (1024)
+++
T Consensus 293 ll~ 295 (364)
T cd05599 293 IKS 295 (364)
T ss_pred Hhc
Confidence 875
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=307.33 Aligned_cols=259 Identities=25% Similarity=0.345 Sum_probs=218.4
Q ss_pred hhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccch-----hhhHHHHHHHHHHHHHHhcc-ccCceeeEEEE
Q 001706 686 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR-----KLNQKLEKEFIAEIEILGTI-RHANIVKLWCC 759 (1024)
Q Consensus 686 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 759 (1024)
.+.+...|...+.+|.|..++|.++.++.++..+|+|++.... ....+..+.-.+|+.+++++ .||+|+.+.++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 4556778999999999999999999999999999999885322 12345567888999999998 69999999999
Q ss_pred EecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEE
Q 001706 760 ISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839 (1024)
Q Consensus 760 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nil 839 (1024)
|+.+...++|+|.|+.|.|.|++...- .++++..++|+.|+..|++|||.. .||||||||+|||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~V-------------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENIL 155 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKV-------------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENIL 155 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhe-------------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhhee
Confidence 999999999999999999999998643 488999999999999999999999 9999999999999
Q ss_pred ECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccC------CCCCCCCcchhHHHHHHHHHhCCCCCCCCC
Q 001706 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT------TKVNEKIDIYSFGVVLLELVTGKEANYGDE 913 (1024)
Q Consensus 840 l~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslGvil~el~tg~~p~~~~~ 913 (1024)
+|++.++||+|||.|+.+.++. .....+|||+|.|||.+.. ..|+...|+||+||++|.++.|++||+...
T Consensus 156 lddn~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk 232 (411)
T KOG0599|consen 156 LDDNMNIKISDFGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK 232 (411)
T ss_pred eccccceEEeccceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH
Confidence 9999999999999999886543 3445789999999998763 357788999999999999999999997654
Q ss_pred CcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 914 HTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.-.+...+++.. ..+..+.+.+.+....+++.+|++.||.+|.|++|+++
T Consensus 233 QmlMLR~ImeGk-----------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 233 QMLMLRMIMEGK-----------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHHhcc-----------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 433333332211 12345566777788999999999999999999999984
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=347.73 Aligned_cols=274 Identities=23% Similarity=0.329 Sum_probs=211.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~ 763 (1024)
.++|++.+.||+|+||.||+|..... +..||||++.... .....+.+.+|+++++++. ||||+++++++.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 45788899999999999999986432 3469999986432 2334568999999999996 99999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccC----------------------------------------C----------
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSG----------------------------------------S---------- 793 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~----------------------------------------~---------- 793 (1024)
+..|+||||+++|+|.++++......... .
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999999997643210000 0
Q ss_pred ---------------------------------CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 794 ---------------------------------SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 794 ---------------------------------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
.......+++..+..++.|++.|++|||+. +|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 000113578889999999999999999998 99999999999999
Q ss_pred CCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHH
Q 001706 841 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAE 919 (1024)
Q Consensus 841 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~ 919 (1024)
+.++.+||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-- 348 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-- 348 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--
Confidence 9999999999999987643322222233456788999999999999999999999999999997 8888765322111
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
........ .....+...+..+.+++.+||+.||++||++.++.+.|+++.+
T Consensus 349 -~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 -FYNKIKSG----------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHHHHhcC----------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111111 1111223345788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=339.31 Aligned_cols=242 Identities=23% Similarity=0.325 Sum_probs=198.1
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||||++...........+.+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999989999999998654433334456778888998877 699999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 g~L~~~i~~~~-------------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~ 144 (320)
T cd05590 81 GDLMFHIQKSR-------------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 144 (320)
T ss_pred chHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCe
Confidence 99999987543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+ .....
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i----~~~~~----- 213 (320)
T cd05590 145 EGIFN--GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LNDEV----- 213 (320)
T ss_pred ecCcC--CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH----hcCCC-----
Confidence 54222 12233457899999999999999999999999999999999999999866543332222 11110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
..+...+.++.+++.+|++.||++||++.+
T Consensus 214 ------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 214 ------VYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 011123367889999999999999999843
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=343.91 Aligned_cols=245 Identities=25% Similarity=0.334 Sum_probs=201.7
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
+.||+|+||.||++.+..+++.||+|++.............+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999998899999999997654334444567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~ 144 (325)
T cd05594 81 ELFFHLSRER-------------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCK 144 (325)
T ss_pred cHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCe
Confidence 9999887543 38899999999999999999996 6 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++|||||||++|||++|..||...+.......+.. ...
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~---~~~------ 213 (325)
T cd05594 145 EGIKD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---EEI------ 213 (325)
T ss_pred ecCCC--CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc---CCC------
Confidence 54322 1222345699999999999999999999999999999999999999976544322222111 100
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
..+.....++.+++.+|++.||++|+ +++++++
T Consensus 214 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 214 ------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 01112346788999999999999996 8999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=340.74 Aligned_cols=245 Identities=20% Similarity=0.258 Sum_probs=198.4
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|....+++.||+|++...........+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999989999999999765444445567789999999988 699999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~~~~~~-------------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~ 144 (327)
T cd05617 81 GDLMFHMQRQR-------------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCK 144 (327)
T ss_pred CcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccce
Confidence 99999887543 388999999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC---cchHHHHHHHhhccCCch
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH---TSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 932 (1024)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.........
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 219 (327)
T cd05617 145 EGLGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--- 219 (327)
T ss_pred eccCC--CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---
Confidence 53221 1223346789999999999999999999999999999999999999964221 112222222221110
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
. ..+...+..+.+++.+|++.||++|+++.
T Consensus 220 ------~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 220 ------I--RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ------C--CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 1 11122335678999999999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=342.06 Aligned_cols=246 Identities=23% Similarity=0.335 Sum_probs=200.5
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+|+..+.||+|+||.||+|....+++.||+|++...........+.+..|.++++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999999899999999987554333444567888999998885 678888999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 Ey~~~g~L~~~i~~~~-------------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~D 144 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-------------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIAD 144 (323)
T ss_pred cCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEec
Confidence 9999999999987543 388999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+.. ..
T Consensus 145 fg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~----~~- 217 (323)
T cd05615 145 FGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME----HN- 217 (323)
T ss_pred cccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----CC-
Confidence 99987542221 122345689999999999999999999999999999999999999987654333222211 10
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
. ..+...+..+.+++.+|++.+|++|++..
T Consensus 218 --------~--~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 218 --------V--SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --------C--CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 0 11122346788999999999999999853
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=344.50 Aligned_cols=256 Identities=20% Similarity=0.214 Sum_probs=207.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||+|+++..........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999999999999999997654434455678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 e~~~~~~L~~~l~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~D 145 (330)
T cd05601 81 EYQPGGDLLSLLNRYE------------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLAD 145 (330)
T ss_pred CCCCCCCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEecc
Confidence 9999999999998653 2488899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc------CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY------TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
||++..+..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...........+
T Consensus 146 fg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i--- 221 (330)
T cd05601 146 FGSAARLTANKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI--- 221 (330)
T ss_pred CCCCeECCCCCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH---
Confidence 999987643322 2233456899999999986 456789999999999999999999999765433222111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ...+.....+..+.+++..|++ +|++||++.++++
T Consensus 222 -~~~~~~-------~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 222 -MNFQRF-------LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred -HcCCCc-------cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111110 0111111234678899999998 9999999999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=333.01 Aligned_cols=270 Identities=24% Similarity=0.388 Sum_probs=211.8
Q ss_pred hCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
++|.+.+.||+|+||.||++.. ..++..||+|.+... .....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 5688889999999999999975 234567999988543 23445679999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++++|.+++..................+++..++.++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999999986543211111122234589999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
++|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...........+
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i--- 235 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI--- 235 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence 99999999986543322222233445778999999999999999999999999999999 77787655433222221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
..... ...+...+..+.+++.+||+.||.+||++.|+.+.|+++.
T Consensus 236 -~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 236 -TQGRV----------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred -HcCCc----------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 11110 0001122357899999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=347.92 Aligned_cols=257 Identities=19% Similarity=0.248 Sum_probs=203.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||||++...........+.+.+|+++++.++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888999999999999999999999999999986544334445678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~D 144 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-------------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSD 144 (377)
T ss_pred eCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEee
Confidence 9999999999997543 378888999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCC-----------c----------------------------------eecccccCcccCchhhccCCC
Q 001706 851 FGLAKMLAKQGEP-----------H----------------------------------TMSAVAGSFGYFAPEYAYTTK 885 (1024)
Q Consensus 851 Fgla~~~~~~~~~-----------~----------------------------------~~~~~~gt~~y~aPE~~~~~~ 885 (1024)
||+++.+...... . ......||+.|+|||++.+..
T Consensus 145 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 224 (377)
T cd05629 145 FGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG 224 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC
Confidence 9999643211000 0 001246899999999999999
Q ss_pred CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC
Q 001706 886 VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS 965 (1024)
Q Consensus 886 ~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 965 (1024)
++.++|||||||++|||++|..||.+.........+.. .... +..+.......++.+++.+|+. +|.+
T Consensus 225 ~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~~--------~~~p~~~~~s~~~~dli~~lL~-~~~~ 292 (377)
T cd05629 225 YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN---WRET--------LYFPDDIHLSVEAEDLIRRLIT-NAEN 292 (377)
T ss_pred CCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc---cCCc--------cCCCCCCCCCHHHHHHHHHHhc-CHhh
Confidence 99999999999999999999999976554322221111 0000 0001111223578899999997 6766
Q ss_pred C---CCHHHHHHH
Q 001706 966 R---PSMKEVLQI 975 (1024)
Q Consensus 966 R---Ps~~evl~~ 975 (1024)
| +++.|+++.
T Consensus 293 r~~r~~~~~~l~h 305 (377)
T cd05629 293 RLGRGGAHEIKSH 305 (377)
T ss_pred cCCCCCHHHHhcC
Confidence 5 699998763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=338.13 Aligned_cols=263 Identities=23% Similarity=0.334 Sum_probs=205.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..++||+|+||.||+|.+..++..||+|++.... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 57899999999999999999999889999999886432 2344567999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... .+++..+..++.|++.|++|||+. .+|+||||||+||+++.++.+||+|
T Consensus 83 e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~D 147 (333)
T cd06650 83 EHMDGGSLDQVLKKAG-------------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCD 147 (333)
T ss_pred ecCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEee
Confidence 9999999999997543 378888999999999999999963 1699999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++..+... ......|+..|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 148 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (333)
T cd06650 148 FGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPA 223 (333)
T ss_pred CCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcc
Confidence 9998765322 122346899999999999999999999999999999999999998754432222111000000000
Q ss_pred ---------------------------chhhhc---cCCCCcc-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ---------------------------ITDALD---KGIAEPC-YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ---------------------------~~~~~~---~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.....+ ....... ......++.+++.+||+.||++||++.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 224 ESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000000 0000000 0012356889999999999999999999974
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=328.95 Aligned_cols=256 Identities=25% Similarity=0.358 Sum_probs=208.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.+|+..+.||+|+||.||+|.....++.||+|.+... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 3577788999999999999999888999999988532 223467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 82 e~~~~~~L~~~~~~~~~-----------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~d 147 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-----------QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 147 (263)
T ss_pred EeCCCCcHHHHHHhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCC
Confidence 99999999999975432 3588999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+...... .....
T Consensus 148 f~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~----~~~~~- 221 (263)
T cd05052 148 FGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE----LLEKG- 221 (263)
T ss_pred Ccccccccccee-eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH----HHHCC-
Confidence 999987643211 11112234568999999999999999999999999999998 788876544322211 11111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.....+...+..+.+++.+||+.||++||++.++++.|+.+
T Consensus 222 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 ---------YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11112223347899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=330.27 Aligned_cols=246 Identities=21% Similarity=0.277 Sum_probs=197.1
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|+||+||++.+..+++.||||++...........+.+..|+++++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999989999999998654333333446788999999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+..+.
T Consensus 81 ~~~~~~~~~---------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 81 RYHIYNVDE---------ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred HHHHHhccc---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 988854321 123588999999999999999999998 99999999999999999999999999997654
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................... .
T Consensus 149 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------~ 217 (280)
T cd05608 149 DGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND---------S 217 (280)
T ss_pred CCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc---------C
Confidence 3221 2234578999999999999999999999999999999999999997654322111111111110 0
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 969 (1024)
...+...+..+.+++.+||+.||++||++
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 218 --VTYPDKFSPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred --CCCcccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 01122345678899999999999999944
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=327.68 Aligned_cols=258 Identities=26% Similarity=0.427 Sum_probs=209.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
++|+..+.||+|+||.||+|..... ...||||.++... .......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 4688899999999999999988543 4579999885432 3344567999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++.... ..+++..+++++.|++.|++|||+. +|+||||||+||++++++.++
T Consensus 82 iv~e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~ 146 (266)
T cd05033 82 IITEYMENGSLDKFLREND------------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCK 146 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEE
Confidence 9999999999999997543 2488999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
++|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |..||............ .
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~ 222 (266)
T cd05033 147 VSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV----E 222 (266)
T ss_pred ECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH----H
Confidence 999999987753222222223345678999999999999999999999999999998 88888654433222221 1
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
... ..+.+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 223 ~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 223 DGY----------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred cCC----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 1111223346789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=343.40 Aligned_cols=250 Identities=28% Similarity=0.420 Sum_probs=199.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|.+..+++.||||++.... .....+.+.+|+++++.++|+||+++++++.+.+..++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 456778889999999999999998889999999985432 234457899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+.. ...+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 151 ~e~~~~~~L~~~~-----------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~ 210 (353)
T PLN00034 151 LEFMDGGSLEGTH-----------------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIA 210 (353)
T ss_pred EecCCCCcccccc-----------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEc
Confidence 9999999986422 245667889999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
|||+++.+..... ......||..|+|||++.. ...+.++|||||||++|||++|+.||...............
T Consensus 211 DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 288 (353)
T PLN00034 211 DFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI 288 (353)
T ss_pred ccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence 9999987643211 2234578999999998743 23456899999999999999999999754433322221111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ..........++.+++.+||+.||++||++.|+++
T Consensus 289 ~~~~-----------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 289 CMSQ-----------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred hccC-----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110 01112234467899999999999999999999987
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=331.88 Aligned_cols=265 Identities=24% Similarity=0.322 Sum_probs=204.0
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|....+++.||+|+++.... ......+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 4578889999999999999999998999999999864322 22235678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 82 ~e~~~-~~l~~~l~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~ 145 (288)
T cd07871 82 FEYLD-SDLKQYLDNCG------------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLA 145 (288)
T ss_pred EeCCC-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEC
Confidence 99997 59999887543 2377889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||+++...... .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||.+...........+.....
T Consensus 146 DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07871 146 DFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTP 223 (288)
T ss_pred cCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999997643221 12234567899999998865 568999999999999999999999997665433332222211100
Q ss_pred -----------CCchhhhccCCCCcc----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 -----------KPITDALDKGIAEPC----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 -----------~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........+...... ......+..+++.+|++.||.+|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 224 TEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000 0112356789999999999999999999974
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=338.33 Aligned_cols=245 Identities=23% Similarity=0.352 Sum_probs=200.5
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|+...+++.||||++...........+.+..|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999988999999999765433344456788899999876 799999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~ 144 (321)
T cd05591 81 GDLMFQIQRSR-------------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCK 144 (321)
T ss_pred CcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccce
Confidence 99999987543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...........+. ....
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~----~~~~----- 213 (321)
T cd05591 145 EGILN--GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL----HDDV----- 213 (321)
T ss_pred ecccC--CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH----cCCC-----
Confidence 64322 122334568999999999999999999999999999999999999998765433332221 1110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-------SMKEVLQ 974 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 974 (1024)
..+...+.++.+++.+|++.||++|| ++.++++
T Consensus 214 ------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 214 ------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 01111236788999999999999999 6666664
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=330.02 Aligned_cols=258 Identities=24% Similarity=0.324 Sum_probs=205.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
++|+..+.||+|+||.||+|.+..+++ .|++|.+... .......++..|+.+++.++||||+++++++. ....
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence 467888999999999999999876665 4777776422 12334467888999999999999999999875 4567
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++++||+++|+|.+++.... ..++|..+..++.||+.||+|||+. +++||||||+||++++++.+
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~ 148 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHR------------DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIV 148 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcE
Confidence 89999999999999997543 2488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++...............++..|+|||.+.+..++.++||||||+++||+++ |..||.+.......+.+
T Consensus 149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~---- 224 (279)
T cd05111 149 QIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL---- 224 (279)
T ss_pred EEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----
Confidence 9999999987644333333344567789999999999999999999999999999998 88888765433222221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
..... ...+..+...+.+++.+||..||++||++.|+++.|..+.
T Consensus 225 ~~~~~----------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 225 EKGER----------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred HCCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11111 0111122356788999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=347.14 Aligned_cols=257 Identities=26% Similarity=0.311 Sum_probs=209.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|++..+++.||||+++............+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999999899999999996544333344577999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 e~~~~~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~D 144 (350)
T cd05573 81 EYMPGGDLMNLLIRKD-------------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLAD 144 (350)
T ss_pred cCCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeec
Confidence 9999999999998643 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCC---------------------------CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHH
Q 001706 851 FGLAKMLAKQG---------------------------EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELV 903 (1024)
Q Consensus 851 Fgla~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~ 903 (1024)
||+++...... .........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 145 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 145 FGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred CCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc
Confidence 99998664332 011223456899999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 001706 904 TGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-MKEVLQI 975 (1024)
Q Consensus 904 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 975 (1024)
+|+.||...........+. ... .....+.....+..+.+++.+|++ ||++||+ ++|+++.
T Consensus 225 ~g~~Pf~~~~~~~~~~~i~----~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 225 YGFPPFYSDTLQETYNKII----NWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred cCCCCCCCCCHHHHHHHHh----ccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 9999998765332221111 100 000111111134678899999997 9999999 9999863
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=349.59 Aligned_cols=370 Identities=26% Similarity=0.397 Sum_probs=233.2
Q ss_pred CCCcccccCcccc-CCCccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEec
Q 001706 122 KLQNLDLSQNYFV-GPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGL 200 (1024)
Q Consensus 122 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 200 (1024)
..+-.|+++|.|+ +..|.....+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3444555555555 234444444555555555444444 44444444444444444444444 22333333333333333
Q ss_pred ccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccC
Q 001706 201 AYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (1024)
Q Consensus 201 s~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (1024)
..|++. ..-||..+..+..|+.||||+|+++ ..|..+..-+++-+|+||+|+|
T Consensus 86 R~N~LK-------------------------nsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I- 138 (1255)
T KOG0444|consen 86 RDNNLK-------------------------NSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI- 138 (1255)
T ss_pred hccccc-------------------------cCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc-
Confidence 333210 2233444445555555555555555 4455555445555555544444
Q ss_pred CCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccC
Q 001706 281 GEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGL 360 (1024)
Q Consensus 281 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 360 (1024)
..+....|.+++.|-+||||+|++. .+|..+..+..|++|+|++|.+...--..+..
T Consensus 139 ----------------------etIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPs 195 (1255)
T KOG0444|consen 139 ----------------------ETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPS 195 (1255)
T ss_pred ----------------------ccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCcc
Confidence 4222233445555555666666655 45555555555666666666554322233445
Q ss_pred CCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccc
Q 001706 361 HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLM 440 (1024)
Q Consensus 361 ~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 440 (1024)
|++|+.|++++.+=+ ...+|.++..+.+|..+|||.|++. .+|+.+.++.+|+.|+
T Consensus 196 mtsL~vLhms~TqRT-----------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLN 251 (1255)
T KOG0444|consen 196 MTSLSVLHMSNTQRT-----------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLN 251 (1255)
T ss_pred chhhhhhhcccccch-----------------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheec
Confidence 666777777665543 1246778888888899999999988 8888888888888888
Q ss_pred cccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccC-CC
Q 001706 441 LSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLS-GK 519 (1024)
Q Consensus 441 Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ 519 (1024)
||+|+|+ .+.-+.+.|.+|+.|++|.|+++ .+|..++.|+.|+.|++.+|+|+ ..
T Consensus 252 LS~N~it-----------------------eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeG 307 (1255)
T KOG0444|consen 252 LSGNKIT-----------------------ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEG 307 (1255)
T ss_pred cCcCcee-----------------------eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccC
Confidence 8888876 23345567778888888888888 78888888888888888888876 45
Q ss_pred CccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCcccccc-cccccccCCccccCCCc
Q 001706 520 LPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPD 593 (1024)
Q Consensus 520 ~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l~-l~~l~l~~N~l~g~~p~ 593 (1024)
||+.++++.+|+.+..++|+|. .+|..++.+..|+.|.|++|+|- ++|..|.-+. |..|||.+|.-.=.+|.
T Consensus 308 iPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 308 IPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred CccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 7888888888888888888886 78888888888888888888887 7888887774 88888888876655553
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=326.38 Aligned_cols=251 Identities=27% Similarity=0.363 Sum_probs=200.4
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
+.||+|+||.||+|++..+++.||+|.+... ........+.+|+++++.++||||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 4689999999999999888999999987533 23444578999999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||++..
T Consensus 79 ~L~~~~~~~~------------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 143 (252)
T cd05084 79 DFLTFLRTEG------------PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSRE 143 (252)
T ss_pred cHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcc
Confidence 9999997433 2478999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
...............+..|+|||.+.++.++.++||||+|+++|||++ |..||............ .
T Consensus 144 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~----~--------- 210 (252)
T cd05084 144 EEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI----E--------- 210 (252)
T ss_pred cccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH----H---------
Confidence 432211111111223467999999999999999999999999999998 76776543322111111 1
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
.......+...+..+.+++.+||+.+|++||++.|+.++|++
T Consensus 211 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 211 -QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred -cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 111112223345688999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=333.78 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=197.0
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||||+++............+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999988999999998654322233345677788888765 899999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 g~L~~~l~~~~-------------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05619 81 GDLMFHIQSCH-------------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcce
Confidence 99999997543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
...... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+ ....+
T Consensus 145 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i----~~~~~----- 213 (316)
T cd05619 145 ENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSI----RMDNP----- 213 (316)
T ss_pred ECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhCCC-----
Confidence 532211 1223456899999999999999999999999999999999999999765543322221 11110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK-EVL 973 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 973 (1024)
..+......+.+++.+||+.||++||++. ++.
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 214 ------CYPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ------CCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 01112235788999999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=354.87 Aligned_cols=255 Identities=23% Similarity=0.280 Sum_probs=206.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC-CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA-GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
..|...+.||+|+||.||+|....+ ++.||+|.+... .......+.+|+++++.++||||+++++++...+..|+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 3488889999999999999988766 778999976432 233345788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 144 ~E~~~gg~L~~~l~~~~~~---------~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~ 211 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKE---------HLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLG 211 (478)
T ss_pred EECCCCCCHHHHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEE
Confidence 9999999999988753210 13478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.+............ ..
T Consensus 212 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~----~~ 287 (478)
T PTZ00267 212 DFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY----GK 287 (478)
T ss_pred eCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----CC
Confidence 99999876443222233455699999999999999999999999999999999999999976543322221111 10
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+.+...+..+.+++.+||+.||++||++++++.
T Consensus 288 ----------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 288 ----------YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ----------CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 01112223467899999999999999999999864
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=338.28 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=194.5
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHH-HHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE-ILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||+||+|.+..+++.||||++.............+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999899999999986543322333345555555 56788999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 g~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~ 144 (323)
T cd05575 81 GELFFHLQRER-------------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCK 144 (323)
T ss_pred CCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCc
Confidence 99999987543 378889999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++|||||||++|||++|..||...+.....+.+. ...
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~~------ 212 (323)
T cd05575 145 EGIEH--SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL----NKP------ 212 (323)
T ss_pred ccccC--CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH----cCC------
Confidence 53221 122334568999999999999999999999999999999999999998655433222211 110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
. ......+..+.+++.+|++.||++||++++
T Consensus 213 ---~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 213 ---L--RLKPNISVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred ---C--CCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence 0 011122467889999999999999999853
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=343.98 Aligned_cols=257 Identities=21% Similarity=0.257 Sum_probs=206.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|....+++.||+|++...........+.+.+|+++++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 45788899999999999999999989999999998654333333445688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 122 ~Ey~~gg~L~~~l~~~--------------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~ 184 (370)
T cd05596 122 MEYMPGGDLVNLMSNY--------------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLA 184 (370)
T ss_pred EcCCCCCcHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEE
Confidence 9999999999998642 267778889999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC----CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.........+.
T Consensus 185 DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~--- 260 (370)
T cd05596 185 DFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM--- 260 (370)
T ss_pred eccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH---
Confidence 9999987543221 122345799999999988653 47889999999999999999999998765433222221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 975 (1024)
..... ...+.....+..+.+++.+|++.+|++ ||++.|+++.
T Consensus 261 -~~~~~-------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 261 -DHKNS-------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -cCCCc-------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11100 011111123467889999999999988 9999999753
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=368.00 Aligned_cols=435 Identities=31% Similarity=0.405 Sum_probs=246.7
Q ss_pred ceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeee
Q 001706 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (1024)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 177 (1024)
.|++|||++|++. ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|+|.+|.+. ..|..+..+++|++|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 3666666666554 55555666666666666666655 44555566666666666666665 556666666666666666
Q ss_pred ccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCC
Q 001706 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEG 257 (1024)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 257 (1024)
.|++. .+|..+..++.++.+..++|. .... ++... ++.++|..|.+.+.++..+.+++. .|+|++|.++
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~--~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~- 191 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNE--KIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME- 191 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcch--hhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-
Confidence 66665 555555566666666666552 1111 11111 455555555555555555544444 4555555554
Q ss_pred CcccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCc
Q 001706 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337 (1024)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 337 (1024)
-..+..+.+|+.|....|++... .....+++.|+.++|.++...+. ..-.+|+++++++|+++ .+|++++.+
T Consensus 192 --~~dls~~~~l~~l~c~rn~ls~l---~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~ 263 (1081)
T KOG0618|consen 192 --VLDLSNLANLEVLHCERNQLSEL---EISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGAC 263 (1081)
T ss_pred --hhhhhhccchhhhhhhhcccceE---EecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhc
Confidence 12234445555555555554421 11222444555555554421111 11234445555555554 334444444
Q ss_pred cccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeec
Q 001706 338 PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417 (1024)
Q Consensus 338 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 417 (1024)
.+|+.|+..+|+|+ .+|..+...++|.++.+..|.+. -+|.....++.|++|||
T Consensus 264 ~nle~l~~n~N~l~-------------------------~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 264 ANLEALNANHNRLV-------------------------ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceEecccchhHH-------------------------hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeee
Confidence 55555555555443 44444444444555554444444 45556666777777777
Q ss_pred ccccCccCCCccccccc--cccccccccCcccCCCCcc---cccCCCEEEcccCcCCCCcccccCCccccceeecCCccc
Q 001706 418 YSNRFSGELPTGLWTTF--NLSSLMLSDNTISGELPSK---TAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLF 492 (1024)
Q Consensus 418 s~N~l~~~~p~~~~~l~--~L~~L~Ls~N~i~~~~p~~---~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l 492 (1024)
..|+|. .+|+.+.... .|..|..+.|+++ ..|.. ....|+.|++.+|.++...-..+.+++.|++|+|++|+|
T Consensus 318 ~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 318 QSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred hhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 777776 5665444432 3566666677666 33321 223477777777777766666667777777777777777
Q ss_pred cccCcc-cccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCC-CCCC
Q 001706 493 SGEIPV-ELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG-EIPP 570 (1024)
Q Consensus 493 ~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g-~ip~ 570 (1024)
. .+|+ .+.++..|++|+||+|+|+ .+|+.+.++..|+.|...+|+|. ..| .+..++.|+.+|+|.|+|+- .+|.
T Consensus 396 ~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 396 N-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred c-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh
Confidence 6 4443 4566777777777777776 66777777777777777777776 566 67777777777777777764 3333
Q ss_pred cccccccccccccCCc
Q 001706 571 EIGQLKLNTFNLSSNK 586 (1024)
Q Consensus 571 ~~~~l~l~~l~l~~N~ 586 (1024)
..-.-+|++|||++|.
T Consensus 472 ~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 472 ALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hCCCcccceeeccCCc
Confidence 3333457777777775
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=337.62 Aligned_cols=245 Identities=25% Similarity=0.346 Sum_probs=200.9
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||||+++............+.+|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999988999999999765433344456788899999888 799999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~~~~~~-------------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 144 (318)
T cd05570 81 GDLMFHIQRSG-------------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCK 144 (318)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCe
Confidence 99999887543 388999999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+ .....
T Consensus 145 ~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i----~~~~~----- 213 (318)
T cd05570 145 EGILG--GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI----LEDEV----- 213 (318)
T ss_pred ecCcC--CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHH----HcCCC-----
Confidence 53221 11223356899999999999999999999999999999999999999765533322221 11110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM-----KEVLQ 974 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 974 (1024)
..+...+..+.+++.+||+.||++||++ .++++
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 ------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0111234678999999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=329.48 Aligned_cols=269 Identities=26% Similarity=0.404 Sum_probs=212.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
++|...+.||+|+||.||+|.... +++.||||.++.... ....+.+.+|+++++.++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 467888999999999999998743 357899999864332 3345789999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccC-CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSG-SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
.++||||+++++|.+++.......... ........+++..+..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 999999999999999998654211000 0112234588999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.++|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||..............
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 999999999976533322222233446788999999999999999999999999999998 9989876554433332221
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
. .....+...+..+.+++.+||+.||++||++.|+++.|++
T Consensus 240 ----~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 240 ----G----------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred ----C----------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1 1111112334678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=331.05 Aligned_cols=265 Identities=24% Similarity=0.333 Sum_probs=199.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc---ccCceeeEEEEEe-----
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI---RHANIVKLWCCIS----- 761 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~----- 761 (1024)
++|+..+.||+|+||.||+|++.. .+..||||+++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 368889999999999999998854 4688999988643322 12234566777777766 6999999999875
Q ss_pred cCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 762 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 762 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
.....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-----------~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~ 144 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-----------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVT 144 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEc
Confidence 2456899999996 699999875432 3478999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.++.+||+|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.........+
T Consensus 145 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 145 SSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred CCCCEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 9999999999999876432 2233456899999999999999999999999999999999999999876554433333
Q ss_pred HHHhhccCC--chhh---hccCC---CC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEKP--ITDA---LDKGI---AE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~~--~~~~---~~~~~---~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........+ .... ..... .. .........+.+++.+|++.||++||++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 221110000 0000 00000 00 000122356789999999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=329.77 Aligned_cols=269 Identities=26% Similarity=0.417 Sum_probs=209.1
Q ss_pred hCCCccceeeecCcEEEEEEEEc----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
++|+..+.||+|+||.||+|... ..+..||+|.+.... .......+.+|++++++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 56788899999999999999852 356789999986432 233456789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccC----CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSG----SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~----~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
++||||+++++|.+++.........+ ........+++.....++.|++.|++|||+. +++||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 99999999999999996443211100 0111124588899999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 921 (1024)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+.......+.+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999987644332222333446778999999998899999999999999999999 77787654332222211
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
..... .+.+...+..+.+++.+||+.||++||++.++.+.|.+
T Consensus 240 ----~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 ----RKRQL----------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ----HcCCc----------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11110 11122334678899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=340.40 Aligned_cols=265 Identities=25% Similarity=0.329 Sum_probs=200.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----Cce
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE-----NSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 766 (1024)
+|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|+++++.++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 47788999999999999999998999999999864322 223345788999999999999999999987543 247
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
|+||||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 142 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND-------------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKL 142 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc-------------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcE
Confidence 99999995 78999887543 388999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCC-CceecccccCcccCchhhccC--CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 847 KIADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+..
T Consensus 143 kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~ 222 (338)
T cd07859 143 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITD 222 (338)
T ss_pred EEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence 9999999986533221 112234578999999999876 6789999999999999999999999976543322221111
Q ss_pred HhhccC-------------CchhhhccCCCCc---ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 HYAEEK-------------PITDALDKGIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ~~~~~~-------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... .....+....... ........+.+++.+||+.||++||+++|+++
T Consensus 223 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 223 LLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 100000 0000000000000 00112356789999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=345.76 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=201.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||+|++.............+.+|++++..++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999999899999999996544333445678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|
T Consensus 81 E~~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~D 144 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-------------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSD 144 (360)
T ss_pred eCCCCccHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEee
Confidence 9999999999997543 378889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCC---------------------------------ceecccccCcccCchhhccCCCCCCCCcchhHHH
Q 001706 851 FGLAKMLAKQGEP---------------------------------HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897 (1024)
Q Consensus 851 Fgla~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv 897 (1024)
||+++.+...... .......||+.|+|||++.+..++.++||||+||
T Consensus 145 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 224 (360)
T cd05627 145 FGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGV 224 (360)
T ss_pred ccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccc
Confidence 9998754321100 0012346899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 001706 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS---MKEVL 973 (1024)
Q Consensus 898 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 973 (1024)
++|||++|+.||.+.........+. .... ....+.......++.+++.+|+ .||++|++ +.|++
T Consensus 225 ilyel~tG~~Pf~~~~~~~~~~~i~----~~~~-------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 225 IMYEMLIGYPPFCSETPQETYRKVM----NWKE-------TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred eeeecccCCCCCCCCCHHHHHHHHH----cCCC-------ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 9999999999997665433222211 1000 0000000112356777887766 49999985 45554
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=336.64 Aligned_cols=391 Identities=23% Similarity=0.222 Sum_probs=248.0
Q ss_pred eEEEccCCCCCCCCCccccCC--CCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeee
Q 001706 100 TTIDLSSNSIPGEFPEFLYNC--TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (1024)
Q Consensus 100 ~~L~L~~n~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 177 (1024)
..||.+.+.+...--..+..+ +.-+.||+|+|+++..-+..|.++++|+.++|..|.++ .||...+...+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 456777776653211112111 22345777777777666666777777777777777776 666655555667777777
Q ss_pred ccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCC
Q 001706 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEG 257 (1024)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 257 (1024)
+|.|+..-..++..++.|+.||||.|. ++..--.+|..-.++++|+|++|.|+.
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~--------------------------is~i~~~sfp~~~ni~~L~La~N~It~ 187 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNL--------------------------ISEIPKPSFPAKVNIKKLNLASNRITT 187 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhch--------------------------hhcccCCCCCCCCCceEEeeccccccc
Confidence 777665555556666666666666553 222222356666677777777777776
Q ss_pred CcccccCCCCCCcEEEccCCccCCCCCcchhhc-ccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCC
Q 001706 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGK 336 (1024)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 336 (1024)
.-...|..+.+|..|.|+.|+++..++..|..+ +|+.|+|..|+|.-.---.|.++++|+.|.|..|.++..-...|..
T Consensus 188 l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~ 267 (873)
T KOG4194|consen 188 LETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYG 267 (873)
T ss_pred cccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceee
Confidence 666667777777777777777765555555432 4555555555555222334555555555555555555444444555
Q ss_pred ccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceee
Q 001706 337 IPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQ 416 (1024)
Q Consensus 337 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~ 416 (1024)
+.++++|+|..|+++.+-..++-++++|+.|+||+|. |...-++++..+++|++|+
T Consensus 268 l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~Na------------------------I~rih~d~WsftqkL~~Ld 323 (873)
T KOG4194|consen 268 LEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNA------------------------IQRIHIDSWSFTQKLKELD 323 (873)
T ss_pred ecccceeecccchhhhhhcccccccchhhhhccchhh------------------------hheeecchhhhcccceeEe
Confidence 5555555555555554444444444444444444444 4445566778889999999
Q ss_pred cccccCccCCCccccccccccccccccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccC
Q 001706 417 LYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEI 496 (1024)
Q Consensus 417 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~ 496 (1024)
|++|+|+...+..|..+..|+.|.|++|.|+. +. ...|..+++|.+|||++|.|++.|
T Consensus 324 Ls~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~-l~---------------------e~af~~lssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 324 LSSNRITRLDEGSFRVLSQLEELNLSHNSIDH-LA---------------------EGAFVGLSSLHKLDLRSNELSWCI 381 (873)
T ss_pred ccccccccCChhHHHHHHHhhhhcccccchHH-HH---------------------hhHHHHhhhhhhhcCcCCeEEEEE
Confidence 99999997777788888888888888888872 21 123344455555666666555444
Q ss_pred c---ccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcC
Q 001706 497 P---VELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564 (1024)
Q Consensus 497 p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 564 (1024)
- ..|..|+.|+.|+|.+|+|....-..|..+.+|+.|||.+|.+...-|.+|..+ .|+.|-++.-.|
T Consensus 382 EDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 382 EDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred ecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 3 245668888888888888884444678888888888888888887788888888 888887764433
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=347.49 Aligned_cols=256 Identities=20% Similarity=0.251 Sum_probs=202.5
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|++.+.||+|+||.||+|+...+++.||||++.............+.+|++++++++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 68889999999999999999998999999999865433333445678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~g~L~~~i~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DF 145 (376)
T cd05598 82 YIPGGDMMSLLIRLG-------------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 145 (376)
T ss_pred CCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeC
Confidence 999999999997543 377888899999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCC-----------------------------------------CceecccccCcccCchhhccCCCCCCCC
Q 001706 852 GLAKMLAKQGE-----------------------------------------PHTMSAVAGSFGYFAPEYAYTTKVNEKI 890 (1024)
Q Consensus 852 gla~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~s 890 (1024)
|+|..+..... ........||+.|+|||++.+..++.++
T Consensus 146 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 225 (376)
T cd05598 146 GLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 225 (376)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcce
Confidence 99853311000 0011234699999999999999999999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC---
Q 001706 891 DIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP--- 967 (1024)
Q Consensus 891 DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--- 967 (1024)
||||+||++|||++|+.||.+.........+. .... ....+.....+..+.+++.+|+ .+|++|+
T Consensus 226 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~----~~~~-------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 226 DWWSVGVILYEMLVGQPPFLADTPAETQLKVI----NWET-------TLHIPSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred eeeeccceeeehhhCCCCCCCCCHHHHHHHHh----ccCc-------cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 99999999999999999998765433222111 0000 0011111123356677888876 5999999
Q ss_pred CHHHHHHH
Q 001706 968 SMKEVLQI 975 (1024)
Q Consensus 968 s~~evl~~ 975 (1024)
++.|+++.
T Consensus 294 t~~ell~h 301 (376)
T cd05598 294 GADEIKAH 301 (376)
T ss_pred CHHHHhCC
Confidence 88888753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=326.07 Aligned_cols=264 Identities=23% Similarity=0.369 Sum_probs=213.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||||.+......+.....++.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999998889999999886544334455678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ....+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 82 e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 149 (267)
T cd08229 82 ELADAGDLSRMIKHFKK---------QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred EecCCCCHHHHHHHhhc---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECc
Confidence 99999999999874322 123588999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++..+..... ......++..|+|||.+.+..++.++||||||+++|||++|..||.+.... ..... .....
T Consensus 150 fg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~-~~~~~--- 222 (267)
T cd08229 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLC-KKIEQ--- 222 (267)
T ss_pred chhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHh-hhhhc---
Confidence 999876643221 122346889999999999999999999999999999999999998754322 11111 11100
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...........+..+.+++.+||+.||++|||+.+|++.++++
T Consensus 223 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 223 ------CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ------CCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 0001111123456889999999999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=358.91 Aligned_cols=273 Identities=25% Similarity=0.294 Sum_probs=212.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|++.++||+|+||.||+|.+..+++.||||++...........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999999889999999997554444555678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||++||+|.+++....... ..........++..+++++.||++||+|||+. +|+||||||+||+++.++.++|+|
T Consensus 82 EY~eGGSL~~lL~s~~~~~--~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKE--SLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EcCCCCCHHHHHHHhhhcc--ccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEe
Confidence 9999999999997532110 00011123467888999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCC----------------CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC
Q 001706 851 FGLAKMLAKQGE----------------PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914 (1024)
Q Consensus 851 Fgla~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~ 914 (1024)
||+++....... ........||+.|+|||++.+..++.++||||+||++|||+||+.||.....
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~ 236 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence 999987621110 0011234689999999999999999999999999999999999999976432
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcC
Q 001706 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRCC 980 (1024)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~ 980 (1024)
...... ..... + .......+.+..+.+++.+|++.||++|| +++++.+.|+...
T Consensus 237 ~ki~~~--~~i~~--P--------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 237 RKISYR--DVILS--P--------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred hhhhhh--hhccC--h--------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 211110 00000 0 00001123346788999999999999995 5666777777664
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=334.06 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=197.3
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||+|+++............+..|.+++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999999999999999999654332233345677788888765 899999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 81 g~L~~~i~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05620 81 GDLMFHIQDKG-------------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCe
Confidence 99999987543 378889999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.....+.+ ....+
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~----~~~~~----- 213 (316)
T cd05620 145 ENVFG--DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI----RVDTP----- 213 (316)
T ss_pred ecccC--CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----HhCCC-----
Confidence 53221 12234467899999999999999999999999999999999999999766543322221 11110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK-EVL 973 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 973 (1024)
..+.....++.+++.+||+.||++||++. ++.
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 ------HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01111235788999999999999999985 454
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=353.31 Aligned_cols=259 Identities=25% Similarity=0.283 Sum_probs=208.9
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN---- 764 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 764 (1024)
..++|++.+.||+|+||+||+|....+++.||||++..... .......+.+|+.++..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999999988999999999865432 3344567889999999999999999987764322
Q ss_pred ----ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 765 ----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 765 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
..++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~---------~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl 176 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKT---------NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILL 176 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhcc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEE
Confidence 367999999999999999754321 23588899999999999999999998 99999999999999
Q ss_pred CCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 841 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 841 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
+.++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........
T Consensus 177 ~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 177 CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK 256 (496)
T ss_pred eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99999999999999876443222233456799999999999999999999999999999999999999976543222211
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .... ..+.+...+.++.+++.+||+.||++||++.++++
T Consensus 257 ~----~~~~----------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 257 T----LAGR----------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred H----hcCC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 1 1110 11122234467899999999999999999999975
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=337.21 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=202.2
Q ss_pred CCCccceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhh-hHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCce
Q 001706 692 SLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 766 (1024)
+|++.+.||+|+||.||+++.. .+++.||+|++...... .....+.+.+|+++++.+ +||+|+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999998763 46789999998654322 223346788999999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~ 144 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-------------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHV 144 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCE
Confidence 99999999999999997543 378899999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++.+...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+....
T Consensus 145 kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 223 (332)
T cd05614 145 VLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI 223 (332)
T ss_pred EEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999865433222 22345689999999998865 47889999999999999999999997544333222222222
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
.... ...+...+..+.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 224 LKCD-----------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred hcCC-----------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111 111122346788999999999999999 6667764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=340.36 Aligned_cols=257 Identities=22% Similarity=0.282 Sum_probs=204.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|....+++.||+|++...........+.+.+|+.+++.++||||+++++++.++...|+|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 35788999999999999999999989999999998654333334456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 122 ~Ey~~gg~L~~~l~~~--------------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 122 MEYMPGGDLVNLMSNY--------------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred EcCCCCCcHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEE
Confidence 9999999999999642 367888999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC----CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|||+|..+.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+.
T Consensus 185 DFG~a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~--- 260 (370)
T cd05621 185 DFGTCMKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM--- 260 (370)
T ss_pred ecccceecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHH---
Confidence 999998764322 1222356799999999998754 37889999999999999999999998665332222111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 975 (1024)
.... ....+.....+..+.+++..|+..++.+ |+++.|+++.
T Consensus 261 -~~~~-------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 261 -DHKN-------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -hCCc-------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1100 0111111223466788999999865544 8899998874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=333.15 Aligned_cols=249 Identities=28% Similarity=0.398 Sum_probs=210.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.-|...+.||+|+||.||-|++..+.+.||||++............++..|++.++.++|||++.+.|||-.+...++||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 45667788999999999999999999999999997776666677789999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||- |+-.|++...++ ++.+..+..|+.+.+.||+|||++ +.+|||||+.|||+++.|.||++|
T Consensus 106 EYCl-GSAsDlleVhkK------------plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaD 169 (948)
T KOG0577|consen 106 EYCL-GSASDLLEVHKK------------PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLAD 169 (948)
T ss_pred HHHh-ccHHHHHHHHhc------------cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeecc
Confidence 9996 788888886654 588889999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||.|....+ ...++|||.|||||++. .+.|+-++||||+|++..|+..+++|.+..+.-+....+. ..
T Consensus 170 FGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIA---QN 240 (948)
T KOG0577|consen 170 FGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---QN 240 (948)
T ss_pred ccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHH---hc
Confidence 999987633 23578999999999864 6789999999999999999999999987654322111111 11
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+. +.+ ...+.+..+..++..|+++-|.+|||..++++
T Consensus 241 es-------PtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 241 ES-------PTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CC-------CCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11 111 13456678999999999999999999998864
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=337.99 Aligned_cols=273 Identities=24% Similarity=0.372 Sum_probs=208.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec-C
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS-E 763 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-~ 763 (1024)
++|++.+.||+|+||.||+|...+ +++.||+|++..... ....+.+.+|+.+++++ +||||+++++++.. +
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 468889999999999999997533 347899999864332 23346788999999999 89999999998765 4
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc------------------------------------------------CCCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS------------------------------------------------GSSS 795 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~------------------------------------------------~~~~ 795 (1024)
...+++|||+++++|.+++......... ....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5688999999999999999754321000 0000
Q ss_pred cccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCccc
Q 001706 796 VHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875 (1024)
Q Consensus 796 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y 875 (1024)
.....++|..+.+++.||+.|++|||+. +|+||||||+||+++.++.++|+|||+++.+.............++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 0123689999999999999999999998 9999999999999999999999999999876443322233344567789
Q ss_pred CchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHH
Q 001706 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRL 954 (1024)
Q Consensus 876 ~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 954 (1024)
+|||++.+..++.++|||||||++|||++ |..||.+....... ........ ....+.....++.++
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~---~~~~~~~~----------~~~~~~~~~~~~~~l 308 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEF---CRRLKEGT----------RMRAPEYATPEIYSI 308 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHH---HHHHhccC----------CCCCCccCCHHHHHH
Confidence 99999999999999999999999999998 88888654322211 11111110 111112234678999
Q ss_pred HHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 955 ALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 955 i~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
+.+||+.+|++||++.|+++.|+++.+
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=344.44 Aligned_cols=255 Identities=19% Similarity=0.242 Sum_probs=200.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|+..+.||+|+||.||+|+...+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 57888999999999999999998999999999865433334456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~gg~L~~~l~~~~-------------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DF 145 (382)
T cd05625 82 YIPGGDMMSLLIRMG-------------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 145 (382)
T ss_pred CCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeEC
Confidence 999999999997543 377888899999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCC---------------------------------------------CceecccccCcccCchhhccCCCC
Q 001706 852 GLAKMLAKQGE---------------------------------------------PHTMSAVAGSFGYFAPEYAYTTKV 886 (1024)
Q Consensus 852 gla~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~ 886 (1024)
|+|..+..... ........||+.|+|||++.+..+
T Consensus 146 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 225 (382)
T cd05625 146 GLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGY 225 (382)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCC
Confidence 99753311000 000122468999999999999999
Q ss_pred CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCC
Q 001706 887 NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR 966 (1024)
Q Consensus 887 ~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 966 (1024)
+.++||||+||++|||++|+.||.+.........+.. .. .....+.......+..+++.+|+ .+|++|
T Consensus 226 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~--------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R 293 (382)
T cd05625 226 TQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVIN---WQ--------TSLHIPPQAKLSPEASDLIIKLC-RGPEDR 293 (382)
T ss_pred CCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHc---cC--------CCcCCCCcccCCHHHHHHHHHHc-cCHhHc
Confidence 9999999999999999999999986543322111110 00 00111111122356677777765 599999
Q ss_pred CC---HHHHHH
Q 001706 967 PS---MKEVLQ 974 (1024)
Q Consensus 967 Ps---~~evl~ 974 (1024)
++ +.|+++
T Consensus 294 ~~~~~~~ei~~ 304 (382)
T cd05625 294 LGKNGADEIKA 304 (382)
T ss_pred CCCCCHHHHhc
Confidence 87 777764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=328.07 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=201.9
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|+||+||+|.+..+++.||+|.+.............+.+|+++++.++|++++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999999989999999998554333333445688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 ~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg 147 (285)
T cd05632 82 MNGGDLKFHIYNMGN-----------PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred ccCccHHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCC
Confidence 999999998875432 3589999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
++....... ......|+..|+|||++.+..++.++|+||+||++|||++|..||...........+.........
T Consensus 148 ~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~-- 222 (285)
T cd05632 148 LAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE-- 222 (285)
T ss_pred cceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc--
Confidence 987653221 123356899999999999999999999999999999999999999765433222222221111110
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
......+..+.+++.+||+.||++||++.
T Consensus 223 ---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 223 ---------VYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred ---------ccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 11122345788999999999999999943
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=329.59 Aligned_cols=271 Identities=23% Similarity=0.341 Sum_probs=210.5
Q ss_pred CCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 692 SLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
+|++.+.||+|+||.||+|.... ....||+|.+..... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 36778899999999999998743 235689998854332 23356799999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccC-----------CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSG-----------SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~-----------~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
++|+||+++++|.+++.......... ........+++..++.++.|++.|++|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999987643211100 0011123588999999999999999999998 999999999
Q ss_pred CCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCC
Q 001706 836 SNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914 (1024)
Q Consensus 836 ~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~ 914 (1024)
+||++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.+...
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999999999986543332222233345678999999998899999999999999999999 8888865543
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
..+.... ... ...+.+...+.++.+++.+||+.+|++||+++|+++.|+++..
T Consensus 236 ~~~~~~~----~~~----------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ERLFNLL----KTG----------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHH----hCC----------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 3322221 111 1111122334678999999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=330.84 Aligned_cols=272 Identities=26% Similarity=0.369 Sum_probs=212.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
.++|+..+.||+|+||.||++..... ...||+|.+.... ..+....+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 35688889999999999999987533 3689999886432 233456799999999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCC---CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
+..++||||+++|+|.++++.......... .......+++..++.++.|++.|++|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 999999999999999999976432111111 001234689999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHH
Q 001706 841 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAE 919 (1024)
Q Consensus 841 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~ 919 (1024)
+.++.+|++|||+++.+.............++..|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 9999999999999987644322222233345678999999999999999999999999999998 888876544333222
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.... .. ....+......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 246 ~~~~----~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKE----GY----------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHc----CC----------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2111 11 11112233467899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=313.15 Aligned_cols=274 Identities=24% Similarity=0.325 Sum_probs=212.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCc-eeeEEEEEecCC----
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN-IVKLWCCISSEN---- 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~---- 764 (1024)
...|+..++||+|.||+||+|+...+|+.||+|+++.+... +.......+|+.+++.++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45677788899999999999999999999999999765432 223456789999999999999 999999988766
Q ss_pred --ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 765 --SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 765 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
..++||||++ -+|.+++....+.. ..++...+..++.|+++|++|||++ +|+||||||.||++++
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~---------~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLPKKP---------QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISS 155 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhccccc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECC
Confidence 7899999996 79999998766411 2456688999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
+|.+||+|||+|+.+.-. ....+..++|..|+|||++.+. .|+...||||+|||++||++++..|.+..+.+....+
T Consensus 156 ~G~lKlaDFGlAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I 233 (323)
T KOG0594|consen 156 SGVLKLADFGLARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI 233 (323)
T ss_pred CCcEeeeccchHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 999999999999976422 2234567788899999999887 7899999999999999999999999887765544444
Q ss_pred HHHhhccC--Cchh---hhccC--CCCcc-cHH-------HHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 001706 922 WRHYAEEK--PITD---ALDKG--IAEPC-YLE-------EMTTVYRLALICTSTLPSSRPSMKEVLQI--LRRC 979 (1024)
Q Consensus 922 ~~~~~~~~--~~~~---~~~~~--~~~~~-~~~-------~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 979 (1024)
.+...... .... ..+.. ..... +.. ...+..+++.+|++.+|.+|.|++.++.. ++..
T Consensus 234 f~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 234 FRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred HHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 43322111 0000 00111 11100 001 11478889999999999999999998874 4444
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=332.11 Aligned_cols=258 Identities=24% Similarity=0.299 Sum_probs=222.1
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCc
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENS 765 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 765 (1024)
..+...|+..+.||+|.||.||+++.+.+|+.+|+|++.+...........+.+|+++|+++. |||||.++++|++...
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 445667888899999999999999999999999999997765544445678999999999998 9999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC--
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-- 843 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-- 843 (1024)
+++|||++.||.|.+.+... .+++..+..++.|++.|++|||+. ||+|||+||+|+|+...
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~--------------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK--------------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDE 173 (382)
T ss_pred EEEEEEecCCchHHHHHHHc--------------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccC
Confidence 99999999999999999854 188899999999999999999998 99999999999999654
Q ss_pred --CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 844 --FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 844 --~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
+.+|++|||+|..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+.........+
T Consensus 174 ~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i 250 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI 250 (382)
T ss_pred CCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH
Confidence 4799999999998754 44566789999999999999999999999999999999999999999987655443322
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.... ..+..+..........+++..|+..||.+|++++++++.
T Consensus 251 ~~~~-----------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 251 LRGD-----------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HcCC-----------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111 123444555667888999999999999999999999984
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=327.68 Aligned_cols=267 Identities=22% Similarity=0.349 Sum_probs=206.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|+..+.||+|+||.||+|.+.+ .+..||||++.... ......++.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4678899999999999999998642 35679999875432 2234567899999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++......... ......+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMEN---NPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 156 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCC
Confidence 999999999999999999764321110 00123468889999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.++++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+..........
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~-- 234 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV-- 234 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--
Confidence 999999999876543222222222345778999999999999999999999999999999 56777654433222211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
.... . ...+...+..+.+++.+||+.||++||++.|+++.|++
T Consensus 235 --~~~~-~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 --MEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --HcCC-c---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111 0 01112234678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=336.51 Aligned_cols=247 Identities=25% Similarity=0.323 Sum_probs=197.3
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHH-HHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE-ILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||+||+|....+++.||+|++.............+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999899999999986543333344455666655 46778999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~ 144 (325)
T cd05604 81 GELFFHLQRER-------------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCK 144 (325)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcc
Confidence 99999887543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|..||...+......... ...
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~----~~~------ 212 (325)
T cd05604 145 EGIAQ--SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL----HKP------ 212 (325)
T ss_pred cCCCC--CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH----cCC------
Confidence 53221 122334578999999999999999999999999999999999999998765433222211 110
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
. .........+.+++.+|++.||++||++++.++.+
T Consensus 213 ---~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 213 ---L--VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred ---c--cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 0 00112335778999999999999999886544333
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=331.24 Aligned_cols=265 Identities=25% Similarity=0.352 Sum_probs=200.2
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.||+|+||.||+|....+++.||||++..... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3578999999999999999999988899999999854322 12234678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~ 145 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP------------GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLA 145 (303)
T ss_pred EECCC-cCHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEC
Confidence 99996 68888876543 2478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc-hHHHHHHHhhc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS-LAEWAWRHYAE 927 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~ 927 (1024)
|||+++..... ........+|+.|+|||++.+ ..++.++||||+||++|||++|..||.+..... ...........
T Consensus 146 Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (303)
T cd07869 146 DFGLARAKSVP--SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGT 223 (303)
T ss_pred CCCcceeccCC--CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCC
Confidence 99998754322 122334568899999998865 457889999999999999999999997643321 11111110000
Q ss_pred cC--------CchhhhccCCC--Cccc-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EK--------PITDALDKGIA--EPCY-------LEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~--------~~~~~~~~~~~--~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. ........... .+.. ......+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 224 PNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 00000000000 0000 001246789999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=326.81 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=206.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
++|+..+.||+|+||.||+|++..+++ .||+|++.... .....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 467888999999999999999766665 48999885432 33445789999999999999999999999875 457
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++++||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~------------~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~ 148 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENK------------DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHV 148 (279)
T ss_pred EEEEEcCCCCCHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcE
Confidence 89999999999999997643 2488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||...........+.
T Consensus 149 kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~--- 225 (279)
T cd05109 149 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE--- 225 (279)
T ss_pred EECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---
Confidence 9999999987643322222223345678999999999999999999999999999998 777776544332222211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
... ..+.+...+..+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 226 -~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 226 -KGE----------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred -CCC----------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 111122344678999999999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=334.72 Aligned_cols=247 Identities=24% Similarity=0.325 Sum_probs=196.3
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHH-HHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE-ILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|.+..+++.||+|++.............+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999999889999999986543322233344455544 56778999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~ 144 (325)
T cd05602 81 GELFYHLQRER-------------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK 144 (325)
T ss_pred CcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCc
Confidence 99999997543 367788889999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||++.+..++.++||||+||++|||++|..||...........+.. ...
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~---~~~------ 213 (325)
T cd05602 145 ENIEH--NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN---KPL------ 213 (325)
T ss_pred ccccC--CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh---CCc------
Confidence 54321 1223345699999999999999999999999999999999999999986554333222211 100
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
......+..+.+++.+|++.||.+||++.+.+..+
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 214 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 01112336788999999999999999987654433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=341.32 Aligned_cols=257 Identities=21% Similarity=0.281 Sum_probs=199.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++++......++|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 46999999999999999999999999999999652 235678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|++. ++|..++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 163 e~~~-~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~D 225 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR-------------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGD 225 (391)
T ss_pred ecCC-CCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEe
Confidence 9995 78888886543 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc-------hHHHHHH
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS-------LAEWAWR 923 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~-------~~~~~~~ 923 (1024)
||+|+...... ........||+.|+|||++.+..++.++||||+||++|||++|+.|+...+... ....+..
T Consensus 226 FG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~ 304 (391)
T PHA03212 226 FGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR 304 (391)
T ss_pred CCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH
Confidence 99997543221 122234579999999999999999999999999999999999998876532110 0111111
Q ss_pred Hhhc---cCC------chhhh----c-----cCCCC--cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 HYAE---EKP------ITDAL----D-----KGIAE--PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ~~~~---~~~------~~~~~----~-----~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ..+ ..... . ..... ......+.++.+++.+|++.||++|||++|+++
T Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 305 RSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 000 00000 0 00000 001123467889999999999999999999984
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=324.21 Aligned_cols=255 Identities=24% Similarity=0.398 Sum_probs=206.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 457888999999999999999875 45679999875422 2246789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.++++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+
T Consensus 80 ~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~ 145 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEG-----------GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIA 145 (261)
T ss_pred EecCCCCcHHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEEC
Confidence 999999999999975432 3478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...........+. ..
T Consensus 146 dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~----~~ 220 (261)
T cd05072 146 DFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ----RG 220 (261)
T ss_pred CCccceecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH----cC
Confidence 9999987643221 11223345678999999999999999999999999999998 888886554333222221 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
. ..+.....+..+.+++.+||+.+|++||+++++.+.|++
T Consensus 221 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 221 Y----------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred C----------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1 111112234678899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=327.71 Aligned_cols=274 Identities=24% Similarity=0.377 Sum_probs=210.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC----------------CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCcee
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA----------------GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~----------------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 754 (1024)
++|+..+.||+|+||.||+|..... +..||+|.+..... ....+.+.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCEe
Confidence 5788899999999999999887543 35689999864432 34567899999999999999999
Q ss_pred eEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCC
Q 001706 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 834 (1024)
Q Consensus 755 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 834 (1024)
++++++...+..++||||+++++|.+++.......... ......+++..++.++.|++.||+|||+. +++|||||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk 157 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL--ACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA 157 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc--cccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence 99999999999999999999999999997654211000 11223589999999999999999999998 99999999
Q ss_pred CCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh--CCCCCCCC
Q 001706 835 SSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT--GKEANYGD 912 (1024)
Q Consensus 835 ~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t--g~~p~~~~ 912 (1024)
|+||+++.++.++++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ +..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999999986544332223334456788999999998899999999999999999998 55666544
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
............+..... ....+.+...+.++.+++.+||+.||++||++.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 238 TDQQVIENAGHFFRDDGR-------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ChHHHHHHHHhccccccc-------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 333332222221111110 00011122234689999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=323.98 Aligned_cols=262 Identities=22% Similarity=0.327 Sum_probs=205.9
Q ss_pred CCccceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc----
Q 001706 693 LTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS---- 765 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 765 (1024)
|+..+.||+|+||.||+|....+ +..||+|+++.... .......+.+|+++++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 56678999999999999987543 47899999865332 23445789999999999999999999998866544
Q ss_pred --eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 766 --KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 766 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
.++|+||+++|+|..++...... .....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~-------~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLG-------GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLRED 149 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhcc-------CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCC
Confidence 79999999999999998654321 0123588999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 922 (1024)
+.+||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |..||.+.......+...
T Consensus 150 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~ 229 (273)
T cd05035 150 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR 229 (273)
T ss_pred CeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999987644332222223345678999999998999999999999999999999 667775544333222221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
. .. ....+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 230 ~----~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 H----GN----------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred c----CC----------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 11 1111223456889999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=333.30 Aligned_cols=245 Identities=25% Similarity=0.333 Sum_probs=197.6
Q ss_pred ceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhh-hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 697 NLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
+.||+|+||.||++... ..++.||||+++..... .......+.+|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999999863 46789999998654321 223345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 145 (323)
T cd05584 82 LSGGELFMHLEREG-------------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFG 145 (323)
T ss_pred CCCchHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCc
Confidence 99999999997543 367888889999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+. ....
T Consensus 146 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~---~~~~--- 217 (323)
T cd05584 146 LCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL---KGKL--- 217 (323)
T ss_pred CCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH---cCCC---
Confidence 987543221 12233568999999999999999999999999999999999999997655332222111 1110
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
..+......+.+++.+||+.||++|| ++.++++
T Consensus 218 ---------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 ---------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ---------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11122336788999999999999999 7777765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=322.37 Aligned_cols=251 Identities=27% Similarity=0.367 Sum_probs=202.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|... .+..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 46788899999999999999876 45679999875332 12357889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.++++... ..++|..++.++.|++.||+|||+. +|+||||+|+||+++.++.+|++|
T Consensus 79 e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d 143 (256)
T cd05114 79 EFMENGCLLNYLRQRQ------------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSD 143 (256)
T ss_pred EcCCCCcHHHHHHhCc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECC
Confidence 9999999999987533 2378999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...........+.. ..
T Consensus 144 ~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~----~~ 218 (256)
T cd05114 144 FGMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR----GF 218 (256)
T ss_pred CCCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----CC
Confidence 999876533211 11122345678999999998899999999999999999999 7888866554333332211 11
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
. ...+...+..+.+++.+||+.+|++||+++|+++.|
T Consensus 219 ~----------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 219 R----------LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C----------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0 001111235789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=329.05 Aligned_cols=269 Identities=25% Similarity=0.394 Sum_probs=209.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
.+|...+.||+|+||.||+|.... .+..||+|++.... .....+.+.+|+.+++.++||||+++++++.+...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 457778899999999999998753 35789999986433 23345679999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccC---CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSG---SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
.++++||+++++|.+++.......... ........+++..+..++.|++.|++|+|+. +|+||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence 999999999999999996432211000 0111134588999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 921 (1024)
++.+||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |..||.+.......+.+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999886544332222334456789999999998899999999999999999998 66676654332222211
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
. ... ..+.+..++..+.+++..||+.+|++||+++++++.|+.
T Consensus 240 ~----~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 R----NRQ----------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H----cCC----------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 111 112223445778999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=324.82 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=209.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
..+|+..+.||.|+||.||+|.... +..||+|.+.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3568888999999999999999986 8889999985432 23346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.++++.... ..+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+||+
T Consensus 81 ~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~ 146 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG-----------QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVA 146 (261)
T ss_pred EeecccCCHHHHHhcCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEc
Confidence 999999999999986432 3478999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||.+..+... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||...............
T Consensus 147 d~g~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---- 220 (261)
T cd05148 147 DFGLARLIKED--VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG---- 220 (261)
T ss_pred cccchhhcCCc--cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC----
Confidence 99999766332 112223446778999999998899999999999999999999 78888665433333322211
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
...+.+...+..+.+++.+||+.||++||+++++.+.|+.
T Consensus 221 ----------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 ----------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ----------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1111223344678999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=321.72 Aligned_cols=264 Identities=23% Similarity=0.364 Sum_probs=214.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||+|.++.....+....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46888899999999999999998889999999886543334445678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++...... ...+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.++++|
T Consensus 82 e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d 149 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQ---------KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ecCCCCCHHHHHHHhccc---------CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEec
Confidence 999999999998753221 13478899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++........ ......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.. ....
T Consensus 150 ~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~-~~~~---- 221 (267)
T cd08224 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLC-KKIE---- 221 (267)
T ss_pred cceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHH-hhhh----
Confidence 999876543211 122346788999999999999999999999999999999999998654321 11111 1111
Q ss_pred chhhhccCCCCcccH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 931 ITDALDKGIAEPCYL-EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.+...+.+. ..+..+.+++.+||+.+|++||++.+++++|+++.
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 222 ------KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 011111122 34467889999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=335.07 Aligned_cols=241 Identities=25% Similarity=0.349 Sum_probs=193.7
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHH-HHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE-ILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
++||+|+||.||+|++..+++.||+|++.............+.+|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999899999999986543333333455556654 57888999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
++|..++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 144 (321)
T cd05603 81 GELFFHLQRER-------------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCK 144 (321)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCc
Confidence 99998887533 377888889999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........||+.|+|||.+.+..++.++||||+||++|||++|..||.+.+.....+.+. .. +
T Consensus 145 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~----~~-~----- 212 (321)
T cd05603 145 EGVEP--EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL----HK-P----- 212 (321)
T ss_pred cCCCC--CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh----cC-C-----
Confidence 53221 122334568999999999999999999999999999999999999998765333222211 11 0
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
...+......+.+++.+|++.||.+||++.
T Consensus 213 -----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 -----LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 011122346788999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=325.78 Aligned_cols=264 Identities=25% Similarity=0.348 Sum_probs=207.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|+..+.||+|+||.||+|.+.. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3568888999999999999999876 67789999875332 2334567999999999999999999999999988
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++........ ....++|..+.+++.||+.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPE------RPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG 153 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC
Confidence 99999999999999999976542110 123589999999999999999999998 999999999999998764
Q ss_pred ---cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHH
Q 001706 845 ---KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 920 (1024)
Q Consensus 845 ---~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~ 920 (1024)
.+|++|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||...........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~ 233 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF 233 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 599999999987633221111122234568999999999999999999999999999997 8888765443322221
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
+ .... ....+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 234 ~----~~~~----------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 234 V----TGGG----------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred H----HcCC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1 1111 111122334678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=326.99 Aligned_cols=267 Identities=30% Similarity=0.425 Sum_probs=204.5
Q ss_pred CccceeeecCcEEEEEEEE----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceE
Q 001706 694 TESNLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKL 767 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 767 (1024)
+..+.||+|+||+||++.. ..++..||+|.++... .......+.+|+++++.++||||+++++++... ...+
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 7789999999999987653 3467789999986432 223456788999999999999999999987653 3578
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++
T Consensus 85 lv~e~~~~~~l~~~~~~~--------------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~ 147 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH--------------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVK 147 (283)
T ss_pred EEecCCCCCCHHHHHHHc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEE
Confidence 999999999999999642 388999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH--
Q 001706 848 IADFGLAKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH-- 924 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~-- 924 (1024)
|+|||+++.+........ .....++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ..+.....
T Consensus 148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~ 226 (283)
T cd05080 148 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQG 226 (283)
T ss_pred EeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhccccc
Confidence 999999987644322111 12234566799999999899999999999999999999999997543211 00000000
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
........+..+.....+.+...+..+.+++..||+.+|++||+++++++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00001111122222222233344578999999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=329.26 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=208.2
Q ss_pred hhCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
.++|...+.||+|+||.||+|.. ...+..||||+++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 45788899999999999999975 23456899998854322 33356799999999999 799999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +|+|+||||+||+++.+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~ 177 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-----------SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHG 177 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCC
Confidence 999999999999999999975432 2378999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 922 (1024)
+.++++|||+++.+.............++..|+|||.+.+..++.++||||+||++|||++ |..||..........
T Consensus 178 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~--- 254 (302)
T cd05055 178 KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFY--- 254 (302)
T ss_pred CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHH---
Confidence 9999999999986644322222223456788999999999999999999999999999998 888876543322111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...... .....+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 255 ~~~~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 255 KLIKEG----------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHcC----------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111111 11111122246789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=325.10 Aligned_cols=254 Identities=23% Similarity=0.308 Sum_probs=203.8
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|+||.||++....+++.||||.+...........+.+.+|+.++++++|++++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 56678899999999999999999999999998654333333445678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 ~~g~~L~~~l~~~~~-----------~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05630 82 MNGGDLKFHIYHMGE-----------AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLG 147 (285)
T ss_pred cCCCcHHHHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeecc
Confidence 999999999865432 3488899999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
++....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||.................. ..
T Consensus 148 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~ 221 (285)
T cd05630 148 LAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQ 221 (285)
T ss_pred ceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hh
Confidence 987653221 222346899999999999999999999999999999999999999765432211111111100 00
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 974 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 974 (1024)
. .........+.+++..||+.||++||+ +.|+++
T Consensus 222 ----~----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 ----E----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----h----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 111223357889999999999999999 777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=339.95 Aligned_cols=273 Identities=20% Similarity=0.329 Sum_probs=209.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~ 763 (1024)
.++|...+.||+|+||.||+|.+.+ .++.||||+++.... ....+.+.+|++++.++. ||||+++++++...
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3567888999999999999998642 456899999965432 233457899999999997 99999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc--------------C-------------------------------------
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS--------------G------------------------------------- 792 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~--------------~------------------------------------- 792 (1024)
+..++||||+++|+|.++++........ +
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 9999999999999999999864321000 0
Q ss_pred ----------------------------------CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 793 ----------------------------------SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 793 ----------------------------------~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
........++|..+..++.|++.|++|||+. +++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 0001123578888999999999999999988 999999999999
Q ss_pred EECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcch
Q 001706 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 917 (1024)
Q Consensus 839 ll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~ 917 (1024)
+++.++.+|++|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 999999999999999987543322222223456788999999999899999999999999999998 7778754332211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
......... ....+...+.++.+++.+||+.+|++||+++|+++.|+++.
T Consensus 351 ---~~~~~~~~~----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 ---FYNAIKRGY----------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ---HHHHHHcCC----------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111111 11112233478999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=330.53 Aligned_cols=270 Identities=27% Similarity=0.371 Sum_probs=208.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCc--EEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCce
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGE--FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 766 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 766 (1024)
+++|+..+.||+|+||.||+|.+..++. .+|+|.++.. ......+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 4578888999999999999999876665 4577776432 2234457889999999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCC---CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
++||||+++++|.++++.......... .......+++..++.++.|++.|++|||+. +++||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999986543211100 011123588999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 922 (1024)
+.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||.+..........
T Consensus 161 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~- 236 (303)
T cd05088 161 YVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL- 236 (303)
T ss_pred CcEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-
Confidence 99999999998642111 11111234678999999988889999999999999999998 88888755433322211
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.. ......+...+..+.+++.+||+.+|++||+++++++.|.++..
T Consensus 237 ---~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 237 ---PQ----------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred ---hc----------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 00111112234578899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=325.87 Aligned_cols=275 Identities=23% Similarity=0.341 Sum_probs=206.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC--------------CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA--------------GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 756 (1024)
.+|++.+.||+|+||.||++..... ...||+|.++... .......+.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 4788899999999999999876432 2358999986432 23445679999999999999999999
Q ss_pred EEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCC
Q 001706 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSS 836 (1024)
Q Consensus 757 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~ 836 (1024)
++++...+..++||||+++++|.+++........ .........+++..++.++.|++.|++|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIEST-FTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhcccccc-ccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 9999999999999999999999999965421000 00001123478899999999999999999998 9999999999
Q ss_pred CEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh--CCCCCCCCCC
Q 001706 837 NILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT--GKEANYGDEH 914 (1024)
Q Consensus 837 Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t--g~~p~~~~~~ 914 (1024)
||+++.++.+||+|||++................++..|+|||++.+..++.++|||||||++|||++ +..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 99999999999999999976543322222223345778999999999999999999999999999998 4556654433
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
..........+..... ......+...+..+.+++.+||+.||++||++++|++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGR-------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccc-------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 3222222111111000 00001111234689999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=325.09 Aligned_cols=267 Identities=22% Similarity=0.338 Sum_probs=210.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|++.+.||+|+||.||+|..... +..||+|.+.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 45788889999999999999987643 3789999985432 2233567889999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++........ .......++|..++.++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAE---NNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchh---hccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 99999999999999999976442110 001123578999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.+||+|||+++...............++..|+|||.+.+..++.++|||||||++||+++ |..||.+.......+...
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~- 235 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI- 235 (277)
T ss_pred CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-
Confidence 999999999986644322222233456788999999998899999999999999999998 777876554433322221
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
... ....+...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 236 ---~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 ---DGG----------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ---cCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111 011122235788999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=326.24 Aligned_cols=271 Identities=24% Similarity=0.400 Sum_probs=211.1
Q ss_pred hCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
.+|...+.||+|+||.||+|... .++..|++|.+.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45777889999999999999853 244568999875432 3345678999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccc---cCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLV---SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~---~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
.++||||+++++|.+++........ ..........++|..++.++.|++.|++|||++ +|+||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999976442100 001111123589999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 921 (1024)
++.++|+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.........+..
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99999999999976543322222233456788999999999999999999999999999999 88887665443322211
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... ....+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 239 ----~~~~----------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 239 ----TQGR----------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred ----hCCC----------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 1110 001112234678999999999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=336.77 Aligned_cols=257 Identities=21% Similarity=0.252 Sum_probs=203.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46899999999999999999999999999999998653333334456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 122 ~Ey~~gg~L~~~~~~~--------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 122 MEYMPGGDLVNLMSNY--------------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred EcCCCCCcHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEE
Confidence 9999999999998642 267788889999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC----CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|||+++...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+.......+.
T Consensus 185 DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~--- 260 (371)
T cd05622 185 DFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM--- 260 (371)
T ss_pred eCCceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH---
Confidence 999998764322 1222346799999999998754 37889999999999999999999998765432222211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 975 (1024)
..... ...+.....+..+.+++..|+..++.+ |+++.|+++.
T Consensus 261 -~~~~~-------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 261 -NHKNS-------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -cCCCc-------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11110 001111223467888999999844433 7788888864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=324.61 Aligned_cols=274 Identities=23% Similarity=0.370 Sum_probs=208.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcC----------------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCcee
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING----------------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 754 (1024)
++|+..+.||+|+||.||++.... ++..||+|++.... .......+.+|+++++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 468889999999999999985432 34479999985432 234457899999999999999999
Q ss_pred eEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCC
Q 001706 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 834 (1024)
Q Consensus 755 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 834 (1024)
++++++...+..++||||+++++|.+++....... .........+++..+..++.|++.|++|||+. +++|||||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk 157 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQE--AAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA 157 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccc--ccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence 99999999999999999999999999998654321 11112234588899999999999999999998 99999999
Q ss_pred CCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh--CCCCCCCC
Q 001706 835 SSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT--GKEANYGD 912 (1024)
Q Consensus 835 ~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t--g~~p~~~~ 912 (1024)
|+||+++.++.++++|||+++.+.............+++.|+|||...++.++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999986543322222223345678999999888899999999999999999998 66777654
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
............+..... ....+.+..++..+.+++.+||+.||++||++.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIENTGEFFRDQGR-------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHHHHHHHHhhccc-------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 433322211111111100 00011122334788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=325.30 Aligned_cols=269 Identities=22% Similarity=0.323 Sum_probs=207.9
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|++.+.||+|+||.||+|...+ .+..||+|.+.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4678999999999999999987542 34579999875432 2233456889999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++|+|.+++........ ........++..+.+++.|++.|++|||+. +|+||||||+||++++++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAE---NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccc---cCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 99999999999999999976432110 011123467788899999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.++++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.+...........
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~- 235 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM- 235 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-
Confidence 999999999986543222222222345678999999999999999999999999999999 666776544332222111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.... ...+...+..+.+++.+||+.||++||++.++++.|++..
T Consensus 236 ---~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 ---DGGY----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ---cCCC----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1100 0111223468999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=321.66 Aligned_cols=259 Identities=26% Similarity=0.471 Sum_probs=207.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc---EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
++|+..+.||+|+||.||+|....++. .||+|.+.... .....+.+..|+++++.++|||++++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 467788999999999999999865443 79999885432 2334577999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~k 147 (268)
T cd05063 83 IITEYMENGALDKYLRDHD------------GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECK 147 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEE
Confidence 9999999999999997533 2478999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 848 IADFGLAKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
++|||++........... ......+..|+|||++.+..++.++|||||||++|||++ |..||...........+
T Consensus 148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i---- 223 (268)
T cd05063 148 VSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI---- 223 (268)
T ss_pred ECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH----
Confidence 999999986643222111 111223567999999998899999999999999999998 89998765433222221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
... ...+...+.+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 224 ~~~----------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 224 NDG----------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred hcC----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 111 111222234578899999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=326.38 Aligned_cols=270 Identities=26% Similarity=0.445 Sum_probs=209.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.++|+..+.||+|+||.||+|...+ ++..||+|++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3568888999999999999998743 56789999986432 2344577999999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCC---------CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGS---------SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
..++||||+++++|.+++........... .......+++..++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 99999999999999999985432111000 111124578999999999999999999998 999999999
Q ss_pred CCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCC
Q 001706 836 SNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914 (1024)
Q Consensus 836 ~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~ 914 (1024)
+||+++.++.++|+|||++..+..............+..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543322222223345678999999999999999999999999999998 7778765443
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
...... ...... ...+...+.++.+++.+||+.||++||++.|+++.|++
T Consensus 239 ~~~~~~----~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EEVIYY----VRDGNV----------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHH----HhcCCC----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 322211 111110 11122334689999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=318.61 Aligned_cols=252 Identities=26% Similarity=0.379 Sum_probs=207.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||+|....+++.||+|.+.... ......+.+.+|+++++.++|||++++++++.+.+..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4677889999999999999999899999999885432 234456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.++++.... ..+++..++.++.|++.|+.|||+. +++||||+|+||+++.++.++|+||
T Consensus 80 ~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df 145 (256)
T cd08529 80 YAENGDLHKLLKMQRG-----------RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDL 145 (256)
T ss_pred eCCCCcHHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccc
Confidence 9999999999986432 3588899999999999999999988 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|+++.+..... ......+++.|+|||+..+..++.++|+||||+++|||++|+.||............ ...
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~--- 216 (256)
T cd08529 146 GVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI----IRG--- 216 (256)
T ss_pred ccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcC---
Confidence 99987643321 123346788999999999999999999999999999999999999765532221111 110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.........+..+.+++.+||+.+|++||++.++++
T Consensus 217 -------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 217 -------VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred -------CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 011111234468899999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=316.68 Aligned_cols=274 Identities=22% Similarity=0.277 Sum_probs=217.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.|+.-++||+|+||.||-++...+|+.||.|++.+.+......+.....|-.++++++.|.||.+--.|+..+..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 45667789999999999999999999999999986665555556677899999999999999999988899999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
..|.||+|.-++..... ..++++.++.+|.+|+.||++||.. +||+||+||+|||+|+.|+++|+|
T Consensus 265 tlMNGGDLkfHiyn~g~-----------~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISD 330 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-----------PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISD 330 (591)
T ss_pred EeecCCceeEEeeccCC-----------CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeec
Confidence 99999999999987764 4699999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
.|+|..+.++ ......+||.+|||||++.++.|+...|.||+||++|||+.|+.||.......-.+.+.+...+
T Consensus 331 LGLAvei~~g---~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--- 404 (591)
T KOG0986|consen 331 LGLAVEIPEG---KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--- 404 (591)
T ss_pred cceEEecCCC---CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc---
Confidence 9999987543 2334458999999999999999999999999999999999999999653221111111110000
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCc-ccCCCCCCCCCcCcccccccc
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGK-KMGRDVDSAPLLGTAGYLFGF 1009 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1009 (1024)
....++...+++..++....+.+||+ .+.|.+ +.+.+++.||+|+ ++.|.+
T Consensus 405 --------~~~ey~~kFS~eakslc~~LL~Kdp~------------------~RLGcrg~ga~evk~HpfFk--~lnw~r 456 (591)
T KOG0986|consen 405 --------DPEEYSDKFSEEAKSLCEGLLTKDPE------------------KRLGCRGEGAQEVKEHPFFK--DLNWRR 456 (591)
T ss_pred --------chhhcccccCHHHHHHHHHHHccCHH------------------HhccCCCcCcchhhhCcccc--cCCHhH
Confidence 01122233334444444444555554 455555 5788999999999 588876
Q ss_pred ccc
Q 001706 1010 KRS 1012 (1024)
Q Consensus 1010 ~~~ 1012 (1024)
.+.
T Consensus 457 lea 459 (591)
T KOG0986|consen 457 LEA 459 (591)
T ss_pred Hhc
Confidence 655
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=328.15 Aligned_cols=273 Identities=24% Similarity=0.364 Sum_probs=211.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEc-------CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEe
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDIN-------GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS 761 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 761 (1024)
.++|++.+.||+|+||.||+|+.. ..+..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 457888899999999999999752 234579999885432 233457899999999999 8999999999999
Q ss_pred cCCceEEEEeccCCCCHHHHhccCccccccCC---CCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 762 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 762 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
..+..++||||+++|+|.+++........... .......++|..+..++.|++.|++|||+. +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999986543110000 011124588999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcch
Q 001706 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 917 (1024)
Q Consensus 839 ll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~ 917 (1024)
+++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||.+......
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 999999999999999987644332222333456778999999999999999999999999999999 6667654432222
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
... ...... ...+...+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 249 ~~~----~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 249 FKL----LKEGHR----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHH----HHcCCc----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 221 111111 11122345788999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.45 Aligned_cols=254 Identities=27% Similarity=0.430 Sum_probs=204.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|++|.||+|... .++.||+|.++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 46888899999999999999875 456899999854321 2466889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|
T Consensus 81 e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d 146 (261)
T cd05068 81 ELMKYGSLLEYLQGGAG-----------RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVAD 146 (261)
T ss_pred ecccCCcHHHHHhccCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECC
Confidence 99999999999976432 3588999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||+++.+.... .........+..|+|||++.+..++.++||||||+++|||++ |+.||.+.........+ ....
T Consensus 147 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~ 221 (261)
T cd05068 147 FGLARVIKEDI-YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV----DQGY 221 (261)
T ss_pred cceEEEccCCc-ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----HcCC
Confidence 99998764321 111111223457999999999999999999999999999999 88887654432222211 1111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
..+.+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 222 ----------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 222 ----------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 111122334688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=321.66 Aligned_cols=261 Identities=21% Similarity=0.303 Sum_probs=201.7
Q ss_pred CccceeeecCcEEEEEEEEcCCCc--EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC------Cc
Q 001706 694 TESNLIGSGGSGQVYRIDINGAGE--FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------NS 765 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 765 (1024)
.+.+.||+|+||.||+|.....+. .||+|.++.... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 456889999999999999876664 699998754322 234457889999999999999999999976432 24
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++|+|.+++...... .....+++.....++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 150 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLG-------DCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMN 150 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhccc-------CCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCC
Confidence 68999999999999988533210 0123488999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
+||+|||+++.+.............+++.|+|||...+..++.++||||||+++|||++ |..||.+.......+.
T Consensus 151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~---- 226 (272)
T cd05075 151 VCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY---- 226 (272)
T ss_pred EEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----
Confidence 99999999987643322222223346678999999999999999999999999999999 6777765433222221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...... ...+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 227 ~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 LRQGNR----------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHcCCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111111 011122346789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=319.77 Aligned_cols=256 Identities=24% Similarity=0.322 Sum_probs=206.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh--hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
+.|+..+.||+|++|.||+|....+++.||+|.+...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999999888999999998643321 12334678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|
T Consensus 82 v~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l 145 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-------------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKL 145 (263)
T ss_pred EEEECCCCcHHHHHHHhC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 999999999999987543 377888999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCc-eecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 849 ADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
+|||+++......... ......++..|+|||.+.+..++.++||||+|+++|||++|+.||...+...... .....
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~ 222 (263)
T cd06625 146 GDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF---KIATQ 222 (263)
T ss_pred eecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH---HHhcc
Confidence 9999997653321111 1123457889999999999999999999999999999999999986543322111 11111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
......+......+.+++.+||+.+|++||++.|+++.
T Consensus 223 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 ----------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01111222344678899999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=319.07 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=199.6
Q ss_pred eeeecCcEEEEEEEE--cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 698 LIGSGGSGQVYRIDI--NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
.||+|+||.||+|.+ ..++..||+|+++... .+....+.+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 4567889999886443 23445678999999999999999999999875 4567899999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~ 143 (257)
T cd05116 80 GPLNKFLQKNK-------------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSK 143 (257)
T ss_pred CcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCcccc
Confidence 99999997533 378899999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 856 MLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 856 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
.......... .....+++.|+|||.+....++.++|||||||++|||++ |..||...........+ ....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i----~~~~---- 215 (257)
T cd05116 144 ALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMI----ESGE---- 215 (257)
T ss_pred ccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HCCC----
Confidence 7644322211 122234578999999988889999999999999999998 88888655433222221 1111
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
..+.+...+.++.+++.+||+.||++||++++|.+.|+..
T Consensus 216 ------~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 216 ------RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112223446789999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=321.40 Aligned_cols=258 Identities=25% Similarity=0.447 Sum_probs=208.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc---EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
..|+..+.||+|+||.||+|....++. .||||++.... .....++|..|+.+++.++||||+++++++.+++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 457788999999999999999876554 69999985432 3444678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~k 146 (269)
T cd05065 82 IITEFMENGALDSFLRQND------------GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCK 146 (269)
T ss_pred EEEecCCCCcHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEE
Confidence 9999999999999997543 2478999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecc-cc--cCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 848 IADFGLAKMLAKQGEPHTMSA-VA--GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~-~~--gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
++|||++..+........... .. .+..|+|||++.+..++.++|||||||++|||++ |..||..........++.
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~- 225 (269)
T cd05065 147 VSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE- 225 (269)
T ss_pred ECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-
Confidence 999999876643322211111 11 2457999999999999999999999999999886 888887655433322221
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
... ..+.+.+.+..+.+++.+||+.+|++||++.+++..|+++
T Consensus 226 ---~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 ---QDY----------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---cCC----------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111 1111223446788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=322.90 Aligned_cols=268 Identities=25% Similarity=0.388 Sum_probs=207.4
Q ss_pred hCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
.+|...+.||+|+||.||++... .++..||+|.+... .....+.+.+|+++++.++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 46777889999999999999742 34668999987533 23445789999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCcccc--ccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSL--VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
.++||||+++++|.+++....... ...........+++..++.++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 999999999999999998654211 1111122234589999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 922 (1024)
+.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||............
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~- 237 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI- 237 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH-
Confidence 9999999999976543222122223345678999999999999999999999999999998 77777554332222111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
..... ...+...+..+.+++.+||+.||++||++.|+.+.|++
T Consensus 238 ---~~~~~----------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 ---TQGRE----------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---HcCcc----------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11110 11112234678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=333.26 Aligned_cols=241 Identities=24% Similarity=0.297 Sum_probs=196.0
Q ss_pred ceeeecCcEEEEEEEE---cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEecc
Q 001706 697 NLIGSGGSGQVYRIDI---NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 773 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 773 (1024)
+.||+|+||.||++.. ..+++.||+|++..... .......+.+|++++++++||||+++++++.+.+..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999876 35688999999965432 2233456788999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccc
Q 001706 774 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL 853 (1024)
Q Consensus 774 ~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgl 853 (1024)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 144 (318)
T cd05582 81 RGGDLFTRLSKEV-------------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 144 (318)
T ss_pred CCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccC
Confidence 9999999987533 388999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 854 AKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 854 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.......+.. ...
T Consensus 145 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~---~~~---- 215 (318)
T cd05582 145 SKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK---AKL---- 215 (318)
T ss_pred CcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc---CCC----
Confidence 87653321 122345789999999999998999999999999999999999999976543322222111 100
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
..+...+..+.+++.+||+.||++||++.+
T Consensus 216 --------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 --------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111223467889999999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=316.92 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=199.0
Q ss_pred eeeecCcEEEEEEEEc--CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 698 LIGSGGSGQVYRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
.||+|+||.||+|... ..+..||+|++.... .....+.+.+|+.++++++||||+++++++. ....++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 3899999999999764 345679999885432 2344577999999999999999999999875 4578999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
++|.+++.... ..+++..+++++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 79 ~~L~~~l~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 143 (257)
T cd05115 79 GPLNKFLSGKK------------DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSK 143 (257)
T ss_pred CCHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccc
Confidence 99999987533 2488999999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 856 MLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 856 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
.+........ .....++..|+|||.+.+..++.++|||||||++||+++ |..||...........+ ...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~----- 214 (257)
T cd05115 144 ALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI----EQG----- 214 (257)
T ss_pred cccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----HCC-----
Confidence 6543322211 122234578999999998899999999999999999996 88888765433222111 111
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.....+..++.++.+++.+||..+|++||++.+|.+.|+..
T Consensus 215 -----~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 215 -----KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122233457889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=345.06 Aligned_cols=264 Identities=24% Similarity=0.296 Sum_probs=197.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-------
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------- 763 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------- 763 (1024)
.+|+..+.||+|+||.||+|....+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 46889999999999999999998899999999885332 2345799999999999999998876432
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...++||||++ +++.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~---------~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYAR---------NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDP 205 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcC
Confidence 23668999997 578777754321 123588999999999999999999998 9999999999999997
Q ss_pred CC-cEEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 843 EF-KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 843 ~~-~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
++ .+||+|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|..||.+.........
T Consensus 206 ~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 282 (440)
T PTZ00036 206 NTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR 282 (440)
T ss_pred CCCceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 64 79999999998764322 22345789999999988764 689999999999999999999999987654433322
Q ss_pred HHHHhhccCCchhhh--------c---c-----CCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 001706 921 AWRHYAEEKPITDAL--------D---K-----GIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 979 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~--------~---~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 979 (1024)
+...... +..+.. + + .+....+...+.++.+++.+||+.||.+||++.|+++ .++.+
T Consensus 283 i~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 283 IIQVLGT--PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHhCC--CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 2221110 000000 0 0 0000111123467899999999999999999999984 44443
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=316.39 Aligned_cols=250 Identities=25% Similarity=0.357 Sum_probs=200.4
Q ss_pred ceeeecCcEEEEEEEEcCCC---cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEecc
Q 001706 697 NLIGSGGSGQVYRIDINGAG---EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 773 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 773 (1024)
++||+|+||.||+|.....+ ..||+|.+...... ...+++.+|+++++.++||||+++++++. ....++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999875444 78999998654332 44578999999999999999999999876 45689999999
Q ss_pred CCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccc
Q 001706 774 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL 853 (1024)
Q Consensus 774 ~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgl 853 (1024)
++++|.+++.... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~ 141 (257)
T cd05060 78 PLGPLLKYLKKRR-------------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGM 141 (257)
T ss_pred CCCcHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccc
Confidence 9999999998543 378999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 854 AKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 854 a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
++.......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...+.......+. ....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~----~~~~- 216 (257)
T cd05060 142 SRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE----SGER- 216 (257)
T ss_pred cceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH----cCCc-
Confidence 987644332211 111223567999999999999999999999999999998 888886554333222221 1111
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.+.+...+..+.+++.+||+.+|++||++.++++.|++.
T Consensus 217 ---------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 ---------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 112223346788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=323.70 Aligned_cols=269 Identities=28% Similarity=0.396 Sum_probs=203.7
Q ss_pred hCCCccceeeecCcEEEEEEEE----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CC
Q 001706 691 SSLTESNLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--EN 764 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~ 764 (1024)
..|+..+.||+|+||.||++.. ..+++.||+|++... .....+.+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 3677889999999999999874 346789999998543 23445688999999999999999999998654 34
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~------------~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~ 145 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR------------ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESEN 145 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC------------cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCC
Confidence 6899999999999999997543 2478999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCcee-cccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTM-SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
.+||+|||+++........... ....++..|+|||++.+..++.++|||||||++|||++|..++...... ..... .
T Consensus 146 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~-~ 223 (284)
T cd05081 146 RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMM-G 223 (284)
T ss_pred eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhc-c
Confidence 9999999999876443222211 1223445699999999999999999999999999999998775432211 00000 0
Q ss_pred HhhccCC----chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 924 HYAEEKP----ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 924 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
....... +.+.+......+.....+..+.+++.+||+.+|++|||++|+++.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 224 NDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000 0111111111122233456799999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=329.49 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=201.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||++....+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999999899999999986543333444567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 e~~~g~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~D 145 (331)
T cd05597 81 DYYVGGDLLTLLSKFE------------DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLAD 145 (331)
T ss_pred ecCCCCcHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEE
Confidence 9999999999997532 2478889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||++..+..... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||...........+.
T Consensus 146 fg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~--- 221 (331)
T cd05597 146 FGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM--- 221 (331)
T ss_pred CCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHH---
Confidence 999976543221 12223468999999999863 457889999999999999999999997654332222111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 975 (1024)
....... .. ......+..+.+++.+|+..++++ ||++.++++.
T Consensus 222 -~~~~~~~-----~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 222 -NHKEHFQ-----FP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -cCCCccc-----CC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1110000 00 011113456788888877654443 7899888764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=317.35 Aligned_cols=252 Identities=24% Similarity=0.315 Sum_probs=206.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||++.+..+++.||+|.++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 47778999999999999999998999999998854322 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++..... ..+++...+.++.|++.|++|||+. +++|+||||+||+++.++.++++||
T Consensus 79 ~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 79 YCDGGDLMQKIKLQRG-----------KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred eCCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEccc
Confidence 9999999999875432 3478889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+........ ......+++.|+|||++.+..++.++|+||||+++|+|++|..||...+......... ...
T Consensus 145 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~----~~~-- 216 (255)
T cd08219 145 GSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC----QGS-- 216 (255)
T ss_pred Ccceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh----cCC--
Confidence 99976643221 2234568899999999999999999999999999999999999997654322211111 110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..+.+...+..+.+++.+||+.||++||++.|++..
T Consensus 217 --------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 011122234578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=322.07 Aligned_cols=266 Identities=21% Similarity=0.302 Sum_probs=211.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcC----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-CCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-ENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 765 (1024)
++|+..+.||+|+||.||+|.... .+..||+|++... ......+.+.+|+.++++++||||+++++++.. ...
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 567888999999999999999865 2578999988543 234446788999999999999999999998766 567
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++++||+++++|.+++....... ......+++..++.++.|++.|++|||+. +++||||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGE-----ANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCc
Confidence 899999999999999997653211 01124589999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
+|++|||+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.||...+......+..
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-- 233 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-- 233 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH--
Confidence 99999999986643322222223446778999999999899999999999999999999 888887654433222221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.... .......+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 234 --~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 234 --DGYR----------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred --cCCC----------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111 1111223467899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=325.73 Aligned_cols=270 Identities=26% Similarity=0.336 Sum_probs=208.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc--EEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE--FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 767 (1024)
++|+..+.||+|+||.||+|....++. .+++|.++... .....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 578889999999999999998876654 47888875322 223356789999999999 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCcccccc---CCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
+|+||+++++|.++++........ .........+++..++.++.|++.|++|||+. +|+||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 999999999999999764421110 00111123588999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.+||+|||++..... .........+..|+|||++.+..++.++|||||||++|||++ |..||............
T Consensus 157 ~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~-- 231 (297)
T cd05089 157 ASKIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL-- 231 (297)
T ss_pred eEEECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--
Confidence 999999999864311 111111223567999999999899999999999999999998 88898765433222211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 982 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 982 (1024)
.. +.....+...+..+.+++.+||+.+|.+||+++++++.|+.+...
T Consensus 232 --~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 232 --PQ----------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred --hc----------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11 111111222346788999999999999999999999999988743
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=317.87 Aligned_cols=252 Identities=24% Similarity=0.348 Sum_probs=201.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|.... +..||||.+..... ..+.+.+|+.++++++||||+++++++.+....++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 467888999999999999998754 45699998854321 2356899999999999999999999999988999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|
T Consensus 79 e~~~~~~l~~~i~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d 143 (256)
T cd05113 79 EYMSNGCLLNYLREHG------------KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSD 143 (256)
T ss_pred EcCCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECC
Confidence 9999999999997543 2478999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++...... ........++..|+|||.+.+..++.++||||||+++|||++ |..||...........+ ....
T Consensus 144 ~g~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~~ 218 (256)
T cd05113 144 FGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV----SQGL 218 (256)
T ss_pred CccceecCCCc-eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----hcCC
Confidence 99988654321 111222345678999999998899999999999999999999 88887654433222221 1111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
. ...+...+..+.+++.+||+.+|++||++.++++.++
T Consensus 219 ~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 219 R----------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred C----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0 0111122468899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=324.84 Aligned_cols=272 Identities=25% Similarity=0.372 Sum_probs=209.4
Q ss_pred hCCCccceeeecCcEEEEEEEEc-------CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec
Q 001706 691 SSLTESNLIGSGGSGQVYRIDIN-------GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS 762 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 762 (1024)
++|.+.+.||+|+||.||+|+.. .....||+|.++... .......+.+|+++++++ +||||+++++++.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 57788899999999999999753 234579999886432 233456789999999999 69999999999999
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccC---CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEE
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSG---SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nil 839 (1024)
.+..++||||+++|+|.+++.......... ........++|..+.+++.|++.|++|||+. +++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 999999999999999999998654211110 0111224589999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchH
Q 001706 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 918 (1024)
Q Consensus 840 l~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~ 918 (1024)
++.++.+||+|||.++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.........
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999986643222111122234567999999999999999999999999999999 77777654433222
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... ... ....+...+.++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 247 ~~~~----~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 247 KLLR----EGH----------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHH----cCC----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 2221 111 011122334678899999999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=320.37 Aligned_cols=259 Identities=24% Similarity=0.363 Sum_probs=208.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
.+|+..+.||+|+||.||+|....+++ .||+|....... ......+.+|+.++++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 467888999999999999998865554 689998754432 3445789999999999999999999999877 788
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 148 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD------------NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHV 148 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC------------CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeE
Confidence 999999999999999976432 388999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||.++...............++..|+|||.+....++.++|+||||+++||+++ |+.||.+.........+.
T Consensus 149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~--- 225 (279)
T cd05057 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE--- 225 (279)
T ss_pred EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh---
Confidence 9999999987654332222222334678999999988899999999999999999998 899987654333222221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... .+.+..+...+.+++.+||..||++||++.++++.|.++..
T Consensus 226 -~~~~----------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 -KGER----------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred -CCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111 11112233578899999999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=329.14 Aligned_cols=259 Identities=20% Similarity=0.238 Sum_probs=203.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||++....+++.||+|++.............+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999999899999999986543333344556889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ey~~~g~L~~~l~~~~------------~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~D 145 (332)
T cd05623 81 DYYVGGDLLTLLSKFE------------DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 145 (332)
T ss_pred eccCCCcHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEee
Confidence 9999999999997533 2478889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||++..+.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...+.......+..
T Consensus 146 fG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~-- 222 (332)
T cd05623 146 FGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN-- 222 (332)
T ss_pred cchheecccCC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC--
Confidence 99997653322 22223456999999999886 34688999999999999999999999986543332222111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 975 (1024)
..... .. .......+..+.+++.+|+..++++ |++++|+++.
T Consensus 223 -~~~~~------~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 223 -HKERF------QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -CCccc------cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 10000 00 0111223467888999988665554 6889988754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=356.98 Aligned_cols=437 Identities=29% Similarity=0.384 Sum_probs=330.5
Q ss_pred EEEEEeCCCcccccCCccccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeCCC
Q 001706 75 VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (1024)
Q Consensus 75 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 154 (1024)
+..|+++++.+. ..|..+..+.+|+.|+++.|.|. ..|.+.+++.+|++|+|.+|.+. ..|.++..+++|++||+|.
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccch
Confidence 778888877764 56888999999999999999998 88999999999999999999998 8899999999999999999
Q ss_pred cccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCccccc
Q 001706 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE 234 (1024)
Q Consensus 155 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 234 (1024)
|++. .+|..+..++.+.++..++|..... ++.+. ++++++..|. ..+.++..++.++. .|+|.+|.+.
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~--l~~~~~~~i~~l~~--~ldLr~N~~~-- 191 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNV--LGGSFLIDIYNLTH--QLDLRYNEME-- 191 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhh--cccchhcchhhhhe--eeecccchhh--
Confidence 9998 8999999999999999999933323 33333 7888888776 34556777777777 7999999987
Q ss_pred CchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCc
Q 001706 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLK 314 (1024)
Q Consensus 235 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 314 (1024)
--.+.++.+|+.|....|+++.. -...++|+.|+.++|.++ .....+...+|+++++++|+++ .+|++++.+.
T Consensus 192 -~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~-~~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~~ 264 (1081)
T KOG0618|consen 192 -VLDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLT-TLDVHPVPLNLQYLDISHNNLS-NLPEWIGACA 264 (1081)
T ss_pred -hhhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcce-eeccccccccceeeecchhhhh-cchHHHHhcc
Confidence 23577889999999999999732 224578999999999999 4334445558999999999999 5679999999
Q ss_pred ccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecc
Q 001706 315 NLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAF 394 (1024)
Q Consensus 315 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~ 394 (1024)
+|+.|+..+|+|+ .+|..+..+.+|+.|.+.+|.+. .+|+..+..++|+.|+|..|++. .+|+.+-.-.
T Consensus 265 nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~-------- 333 (1081)
T KOG0618|consen 265 NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVL-------- 333 (1081)
T ss_pred cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhh--------
Confidence 9999999999997 89999999999999999999999 67888999999999999999998 5555322111
Q ss_pred cCccCCCCCcCCCCccccceeecccccCccCCCc-cccccccccccccccCcccCC-CCcc-cccCCCEEEcccCcCCCC
Q 001706 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPT-GLWTTFNLSSLMLSDNTISGE-LPSK-TAWNLTRLEISNNRFSGQ 471 (1024)
Q Consensus 395 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~i~~~-~p~~-~~~~L~~L~Ls~N~l~~~ 471 (1024)
...|+.|+.+.|++. ..|. +=.....|+.|++.+|.++.. +|.. ...+|+.|+|++|++...
T Consensus 334 --------------~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 334 --------------NASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred --------------hHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 012444444555544 2221 111234566666666666533 2322 335666666666666655
Q ss_pred cccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccC-ccchhhhh
Q 001706 472 IQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG-EIPKAIGS 550 (1024)
Q Consensus 472 ~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g-~ip~~~~~ 550 (1024)
+...+.+|..|++|+||+|+++ .+|+.+..+..|++|...+|+|. ..| ++..+++|+.+|+|.|+|+. .+|.....
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 5566667777777777777777 66777777777777777777776 556 66777777777777777762 23333222
Q ss_pred ccccceecccCCc
Q 001706 551 LLVMVSLDLSGNQ 563 (1024)
Q Consensus 551 l~~L~~L~ls~N~ 563 (1024)
++|++|||++|.
T Consensus 476 -p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 476 -PNLKYLDLSGNT 487 (1081)
T ss_pred -cccceeeccCCc
Confidence 667777777776
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=324.64 Aligned_cols=263 Identities=24% Similarity=0.331 Sum_probs=205.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||++.+..++..||+|.+.... .......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36888999999999999999998889999999885432 2334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||+++++|.++++... .+++..+..++.|+++||+|||+ . +++||||||+||+++.++.++|+
T Consensus 79 ey~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~ 142 (308)
T cd06615 79 EHMDGGSLDQVLKKAG-------------RIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLC 142 (308)
T ss_pred eccCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEc
Confidence 9999999999997543 37888999999999999999997 4 89999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||++...... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...+................
T Consensus 143 dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 218 (308)
T cd06615 143 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGE 218 (308)
T ss_pred cCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcccccc
Confidence 99998765322 12335688999999999888899999999999999999999999875543322221110000000
Q ss_pred C-------------------chhhhcc----CCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 930 P-------------------ITDALDK----GIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 930 ~-------------------~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
. ..+..+. ............++.+++.+||+.||++||++.|+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 219 AKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000000 00000001134578999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=317.18 Aligned_cols=251 Identities=26% Similarity=0.359 Sum_probs=201.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.+|+..+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 35788899999999999999886 466799998853221 1346888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 79 e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d 143 (256)
T cd05059 79 EYMANGCLLNYLRERK------------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSD 143 (256)
T ss_pred ecCCCCCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECC
Confidence 9999999999997543 2478999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++...... ........++..|+|||.+.+..++.++||||||+++|||++ |..||............ ...
T Consensus 144 fg~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~- 217 (256)
T cd05059 144 FGLARYVLDDQ-YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV----SAG- 217 (256)
T ss_pred cccceeccccc-ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH----HcC-
Confidence 99998653321 111112234567999999999999999999999999999999 67777654433222211 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
.....+...+.++.+++.+||+.+|++||++.|+++.|
T Consensus 218 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 ---------YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11111222456899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=331.91 Aligned_cols=264 Identities=27% Similarity=0.326 Sum_probs=201.4
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC---
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--- 764 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 764 (1024)
.+.++|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 467899999999999999999999988999999999864422 2334567889999999999999999999886543
Q ss_pred ---ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 765 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 765 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
..|+||||+++ +|.+.++. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~---------------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~ 157 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM---------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 157 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc---------------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC
Confidence 47999999974 56665542 267788899999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.++.+||+|||+++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||.+.+........
T Consensus 158 ~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~ 234 (359)
T cd07876 158 SDCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 234 (359)
T ss_pred CCCCEEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9999999999999764321 2223457899999999999999999999999999999999999999865432211111
Q ss_pred HHHhh------------------ccCC-c-----hhhhccCC---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYA------------------EEKP-I-----TDALDKGI---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~------------------~~~~-~-----~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... ...+ . .+...... ...........+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 235 IEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 11100 0000 0 00000000 00001112356889999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=326.41 Aligned_cols=273 Identities=25% Similarity=0.367 Sum_probs=209.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC-------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEe
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS 761 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 761 (1024)
.++|.+.+.||+|+||.||+|...+ ....||+|.+.... .......+.+|+++++.+ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 3578899999999999999998643 23469999986532 233356788999999999 7999999999999
Q ss_pred cCCceEEEEeccCCCCHHHHhccCccccccC---CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 762 SENSKLLVYEYMENQSLDRWLHGRKRSLVSG---SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 762 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
+.+..++||||+++|+|.+++.......... ........++|..+++++.|++.|++|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 9999999999999999999998654211000 0011123589999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcch
Q 001706 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 917 (1024)
Q Consensus 839 ll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~ 917 (1024)
+++.++.+||+|||.++...............++..|+|||.+.+..++.++||||+||++|||++ |..||........
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 999999999999999876533221111122234578999999999999999999999999999999 6677754432222
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... ... .....+...+.++.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 252 ~~~~----~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 252 FKLL----KEG----------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHH----HcC----------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 2211 111 1111222344688899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=316.33 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=208.2
Q ss_pred ceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEecc
Q 001706 697 NLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 773 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 773 (1024)
+.||+|+||.||+|..... +..||+|.+....... ..+.+.+|+++++.++|+|++++++++.+....++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999765 8899999986544322 4678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccc
Q 001706 774 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL 853 (1024)
Q Consensus 774 ~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgl 853 (1024)
++++|.+++....... .......+++..++.++.|++.|++|||+. +++||||+|+||++++++.++|+|||.
T Consensus 79 ~~~~L~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 79 EGGDLLDYLRKSRPVF----PSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred cCCcHHHHHhhccccc----cccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 9999999998753210 001124589999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 854 AKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 854 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
+................++..|+|||.+....++.++||||+|+++|||++ |..||.........+... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~----~~---- 223 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR----KG---- 223 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH----cC----
Confidence 987754433233344567889999999998899999999999999999999 577876654332222211 11
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
.....+...+.++.+++.+||+.+|++||++.|+++.|+
T Consensus 224 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 ------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111222333578999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=304.40 Aligned_cols=267 Identities=23% Similarity=0.346 Sum_probs=220.0
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
..++|...+++|+|.||+|-.++-+.+++.||+|+++++..........-..|-++++..+||.+..+.-.|+..++.+.
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 45678889999999999999999999999999999998877777777788899999999999999999888999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+.||.|.-++...+ .+++...+.....|..||.|||++ +||+||+|.+|.|+|.||++||
T Consensus 246 VMeyanGGeLf~HLsrer-------------~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKi 309 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER-------------VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKI 309 (516)
T ss_pred EEEEccCceEeeehhhhh-------------cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEe
Confidence 999999999998887643 488888888999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
.|||+++--. .....+...+|||.|.|||++....|..+.|.|.+||++|||++|+.||+..+...+.+
T Consensus 310 tDFGLCKE~I--~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFe--------- 378 (516)
T KOG0690|consen 310 TDFGLCKEEI--KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFE--------- 378 (516)
T ss_pred eecccchhcc--cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHH---------
Confidence 9999997432 24456678899999999999999999999999999999999999999998766544333
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC-CCCHHHHHHHHhhcCCCCCcC-CcccCCCCCCCCCcCccccc
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS-RPSMKEVLQILRRCCPTENYG-GKKMGRDVDSAPLLGTAGYL 1006 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-RPs~~evl~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1006 (1024)
+|..|=-.-|.. -|-++-++.-|-+..|+++.| +..+++++.+|+||. ++.
T Consensus 379 -------------------------LIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~--~v~ 431 (516)
T KOG0690|consen 379 -------------------------LILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA--SVD 431 (516)
T ss_pred -------------------------HHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhc--cCC
Confidence 333333222322 234444444444444445554 446788889999998 777
Q ss_pred ccc
Q 001706 1007 FGF 1009 (1024)
Q Consensus 1007 ~~~ 1009 (1024)
|+.
T Consensus 432 W~~ 434 (516)
T KOG0690|consen 432 WEA 434 (516)
T ss_pred HHH
Confidence 773
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=316.05 Aligned_cols=254 Identities=30% Similarity=0.464 Sum_probs=203.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.||+|+||.||+|... .+..||+|.+..... ..+.+.+|+.++++++||+++++++++. ....++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 357888999999999999999876 456799998864322 1356899999999999999999999875 4568899
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.++++.... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.++|+
T Consensus 79 ~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~ 144 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEG-----------RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIA 144 (260)
T ss_pred EEecCCCcHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeC
Confidence 999999999999975432 3478999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||.+..+...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.+........... .
T Consensus 145 dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~----~- 218 (260)
T cd05070 145 DFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE----R- 218 (260)
T ss_pred CceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH----c-
Confidence 99999876432211 1122335678999999998999999999999999999999 777776544333222211 1
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
....+.+...+..+.+++.+||+.+|++||+++++.+.|++
T Consensus 219 ---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 ---------GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---------CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11112223345679999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=317.99 Aligned_cols=258 Identities=26% Similarity=0.426 Sum_probs=207.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCC---cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAG---EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
++|+..+.||+|+||.||+|....++ ..||+|.++... .....+.+.+|+.++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46788899999999999999875333 379999885432 2334578999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++
T Consensus 82 lv~e~~~~~~L~~~~~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD------------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEE
Confidence 9999999999999997543 2478999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCc-eecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 848 IADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
++|||++..+....... ......++..|+|||++.+..++.++|+||||+++||+++ |..||...........+.
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~--- 223 (267)
T cd05066 147 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE--- 223 (267)
T ss_pred eCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh---
Confidence 99999998764432211 1122233568999999999899999999999999999887 999987654433322221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
... ..+.....+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 224 -~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 224 -EGY----------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -CCC----------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111 0111223346789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=316.69 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=202.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..++||+|+||.||+|.+..+ ..||+|++..... ..+.+.+|+++++.++||||+++++++. ....++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 4688899999999999999988654 4699999864322 2356899999999999999999999875 45689999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|
T Consensus 80 e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~d 145 (262)
T cd05071 80 EYMSKGSLLDFLKGEMG-----------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 145 (262)
T ss_pred EcCCCCcHHHHHhhccc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEecc
Confidence 99999999999975432 3478999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++.+..... .......++..|+|||+..+..++.++||||||+++|||++ |..||......... ......
T Consensus 146 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~----~~~~~~- 219 (262)
T cd05071 146 FGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG- 219 (262)
T ss_pred CCceeecccccc-ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH----HHHhcC-
Confidence 999987643322 11223446678999999999999999999999999999999 66666544322211 111111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...+...+.+..+.+++.+||+.||++||+++++++.|+..
T Consensus 220 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 220 ---------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ---------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11122234457789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=319.06 Aligned_cols=255 Identities=31% Similarity=0.419 Sum_probs=204.7
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|+||+||++....+++.||+|++....... .......+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 566789999999999999999999999999997654322 2233456699999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++... ..+++..++.++.|+++||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 80 ~~~~~L~~~l~~~-------------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg 143 (260)
T PF00069_consen 80 CPGGSLQDYLQKN-------------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFG 143 (260)
T ss_dssp ETTEBHHHHHHHH-------------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGT
T ss_pred ccccccccccccc-------------ccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence 9999999999832 3488999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhcc-CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
.+... ...........++..|+|||.+. +..++.++||||+|+++|+|++|..||................... .
T Consensus 144 ~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~--~ 219 (260)
T PF00069_consen 144 SSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP--L 219 (260)
T ss_dssp TTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH--H
T ss_pred ccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc--c
Confidence 99765 12233445567899999999998 8889999999999999999999999998652222222111111100 0
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. . .. ........+.+++.+||+.||++||++.++++
T Consensus 220 ~~---~-~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 220 PS---S-SQ--QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HH---H-TT--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc---c-cc--ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 0 00 00011278999999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=315.18 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=201.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEe-cCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS-SENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~l 768 (1024)
.++|+..+.||+|+||.||++... +..||+|.+.... ..+.+.+|+.++++++|+|++++++++. +....++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEE
Confidence 357888899999999999999874 7789999885432 2467899999999999999999999754 4567899
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+++++|.++++.... ..+++..++.++.|++.|++|||++ +++||||||+||+++.++.+|+
T Consensus 78 v~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl 143 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR-----------SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKV 143 (256)
T ss_pred EEECCCCCcHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEe
Confidence 9999999999999976442 3478999999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
+|||+++...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...........+..
T Consensus 144 ~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~---- 214 (256)
T cd05082 144 SDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK---- 214 (256)
T ss_pred cCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc----
Confidence 9999987643221 12334568999999999999999999999999999998 8888765433222222111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.. ........+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 215 ~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 215 GY----------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CC----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 10 1111223346889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=338.00 Aligned_cols=373 Identities=25% Similarity=0.361 Sum_probs=264.7
Q ss_pred cCCCceeEEEccCCCCC-CCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccc
Q 001706 94 CDLKNLTTIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQ 172 (1024)
Q Consensus 94 ~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 172 (1024)
+-|+.++-.|+++|.++ +..|.....+++++.|.|...++. .+|..++.+.+|++|.+++|++. .+-..++.|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 44677889999999999 579999999999999999999998 89999999999999999999999 7888899999999
Q ss_pred eEeeeccccC-CCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeecc
Q 001706 173 TLYLYMNEFN-GTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251 (1024)
Q Consensus 173 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 251 (1024)
.+.+.+|++. .-+|..+..|..|+.||||+|+ ..+.|..+.+-.++-.|+||
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNq---------------------------L~EvP~~LE~AKn~iVLNLS 134 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQ---------------------------LREVPTNLEYAKNSIVLNLS 134 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhh---------------------------hhhcchhhhhhcCcEEEEcc
Confidence 9999999985 3578888899999999999986 45678888889999999999
Q ss_pred CCcCCCCcccccC-CCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccC
Q 001706 252 GNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEV 330 (1024)
Q Consensus 252 ~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 330 (1024)
+|+|. .||..++ +++.|-.||||+|++...+|..-....|++|+|++|.+...--..+..|++|+.|++++.+=+
T Consensus 135 ~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT--- 210 (1255)
T KOG0444|consen 135 YNNIE-TIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT--- 210 (1255)
T ss_pred cCccc-cCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch---
Confidence 99999 6776654 778888888888888755555444446666666666655332233344555555555554322
Q ss_pred CccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCcc
Q 001706 331 PASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCR 410 (1024)
Q Consensus 331 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~ 410 (1024)
...+|.++..+.+|..+|+|.|.+. .+|..+.+++
T Consensus 211 --------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-------------------------~vPecly~l~ 245 (1255)
T KOG0444|consen 211 --------------------LDNIPTSLDDLHNLRDVDLSENNLP-------------------------IVPECLYKLR 245 (1255)
T ss_pred --------------------hhcCCCchhhhhhhhhccccccCCC-------------------------cchHHHhhhh
Confidence 1234445555555555555555544 3334444445
Q ss_pred ccceeecccccCccCCCccccccccccccccccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCc
Q 001706 411 TLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNN 490 (1024)
Q Consensus 411 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N 490 (1024)
+|+.|+||+|+|+ ++-.......+|++|+||.|+++ .+|.+++.+++|+.|.+.+|
T Consensus 246 ~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-----------------------~LP~avcKL~kL~kLy~n~N 301 (1255)
T KOG0444|consen 246 NLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-----------------------VLPDAVCKLTKLTKLYANNN 301 (1255)
T ss_pred hhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-----------------------cchHHHhhhHHHHHHHhccC
Confidence 5555555555554 33322222333333333333333 33444444455555555555
Q ss_pred cccc-cCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCC
Q 001706 491 LFSG-EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 569 (1024)
Q Consensus 491 ~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip 569 (1024)
+++. -||..++.|.+|+++..++|+|. ..|..++.|..|+.|.|++|+|- .+|+.|.-|+.|+.|||..|.=- ..|
T Consensus 302 kL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL-VMP 378 (1255)
T KOG0444|consen 302 KLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL-VMP 378 (1255)
T ss_pred cccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc-cCC
Confidence 4431 46777777888888888888886 78888888888888888888887 78999999999999999988754 455
Q ss_pred Cc
Q 001706 570 PE 571 (1024)
Q Consensus 570 ~~ 571 (1024)
+-
T Consensus 379 PK 380 (1255)
T KOG0444|consen 379 PK 380 (1255)
T ss_pred CC
Confidence 53
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=335.02 Aligned_cols=263 Identities=22% Similarity=0.267 Sum_probs=202.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----ce
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-----SK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 766 (1024)
+|+..+.||+|+||.||+|.+..+++.||||++.... .+....+.+.+|+++++.++||||+++++++.... ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 4778899999999999999998889999999885432 22334567899999999999999999999998766 78
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
|+|+||+. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~ 142 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ-------------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVL 142 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCE
Confidence 99999997 67888776432 488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++..... .........+++.|+|||.+.+. .++.++||||+||++|||++|+.||.+.........+....
T Consensus 143 kL~Dfg~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 221 (372)
T cd07853 143 KICDFGLARVEEPD-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLL 221 (372)
T ss_pred EeccccceeecccC-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 99999999865332 22233445678999999998874 47899999999999999999999997665433322221111
Q ss_pred hccCCch----------hhhcc-CCCC-------cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPIT----------DALDK-GIAE-------PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~----------~~~~~-~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ..... ..+.. .... ........++.+++.+|++.||++||++.|+++
T Consensus 222 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 222 G-TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred C-CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0 00000 00000 0000 001122467889999999999999999999986
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=327.98 Aligned_cols=258 Identities=19% Similarity=0.236 Sum_probs=202.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+++...+++.||+|++.............+.+|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999999899999999986543333344566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 Ey~~gg~L~~~l~~~~------------~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~D 145 (331)
T cd05624 81 DYYVGGDLLTLLSKFE------------DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLAD 145 (331)
T ss_pred eCCCCCcHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEe
Confidence 9999999999997532 2478889999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+++.+.... ........||+.|+|||++.+ +.++.++|||||||++|||++|+.||...........+.
T Consensus 146 fG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~--- 221 (331)
T cd05624 146 FGSCLKMNQDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM--- 221 (331)
T ss_pred ccceeeccCCC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHH---
Confidence 99998764322 122234569999999999875 567889999999999999999999997654332222111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 974 (1024)
...... . . .....+.+.++.+++.+|+..++.+ |++++++++
T Consensus 222 ~~~~~~-~-----~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 222 NHEERF-Q-----F-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCCcc-c-----C-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 110000 0 0 0011123467888999999866544 467877764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=318.02 Aligned_cols=256 Identities=24% Similarity=0.277 Sum_probs=202.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.||+|+||.||+|....+++.||+|++..... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 4579999999999999999999988899999999854321 2235688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.++++... .+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+
T Consensus 85 ~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~ 148 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG-------------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLA 148 (267)
T ss_pred EeCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEC
Confidence 99999999999987533 378899999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|||++..+.... .......++..|+|||.+. ...++.++||||+||++|||++|+.||........... .
T Consensus 149 dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~----~- 221 (267)
T cd06646 149 DFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL----M- 221 (267)
T ss_pred cCccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee----e-
Confidence 999998663221 1122346888999999874 44578899999999999999999999864432111000 0
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
..... ..... ......+..+.+++.+||+.+|++||+++++++.+
T Consensus 222 ~~~~~---~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 222 SKSNF---QPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ecCCC---CCCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000 00000 01112346889999999999999999999998743
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=331.80 Aligned_cols=273 Identities=24% Similarity=0.366 Sum_probs=206.0
Q ss_pred hCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC-
Q 001706 691 SSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE- 763 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~- 763 (1024)
++|+..+.||+|+||.||+|.+ ..+++.||||+++.... ......+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 4788999999999999999974 23567899999864322 23356788999999999 689999999987654
Q ss_pred CceEEEEeccCCCCHHHHhccCcccccc----------------------------------------------------
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVS---------------------------------------------------- 791 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~---------------------------------------------------- 791 (1024)
...++||||+++|+|.+++.........
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 5678999999999999999754211000
Q ss_pred --CCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceeccc
Q 001706 792 --GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869 (1024)
Q Consensus 792 --~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 869 (1024)
.........+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..+............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 00001123578899999999999999999998 9999999999999999999999999999875433222222234
Q ss_pred ccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHH
Q 001706 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEM 948 (1024)
Q Consensus 870 ~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1024)
.+++.|+|||.+.+..++.++||||||+++|||++ |..||........ .......... ...+....
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~~~~~~----------~~~~~~~~ 308 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGTR----------MRAPDYTT 308 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH---HHHHHhccCC----------CCCCCCCC
Confidence 45678999999999999999999999999999997 7777755332211 1111111110 00111123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 949 TTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 949 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
..+.+++..||+.||++||++.|+++.|+.+..
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 578999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=323.95 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=205.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCc----EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
++|+..+.||+|+||.||+|.+..+++ .||+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 467788899999999999999866665 57888875432 233345789999999999999999999998654 56
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~ 148 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHK------------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHV 148 (303)
T ss_pred eeeehhcCCCCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCce
Confidence 79999999999999987543 2478899999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.........+.
T Consensus 149 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~--- 225 (303)
T cd05110 149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE--- 225 (303)
T ss_pred EEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---
Confidence 9999999987643322222233445778999999999999999999999999999997 888886544332222211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... .+.+..+...+.+++..||..+|++||+++++++.|+++..
T Consensus 226 -~~~~----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 226 -KGER----------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred -CCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1110 01111233578899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=321.03 Aligned_cols=264 Identities=25% Similarity=0.329 Sum_probs=197.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc---ccCceeeEEEEEec-----C
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI---RHANIVKLWCCISS-----E 763 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~-----~ 763 (1024)
+|+..+.||+|+||.||+|.+..+++.||+|.++..... ......+.+|+++++.+ +||||+++++++.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 477889999999999999999999999999988643221 11123456677777665 69999999998764 2
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
...++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~-----------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~ 144 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPP-----------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSG 144 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 45799999997 589888875432 3488999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
+.+||+|||+++...... ......+|..|+|||++.+..++.++||||+||++|||++|+.||.+............
T Consensus 145 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~ 221 (288)
T cd07863 145 GQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 221 (288)
T ss_pred CCEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHH
Confidence 999999999998764321 22335678999999999999999999999999999999999999876544332222222
Q ss_pred HhhccC--Cchhhh---ccCCC-------CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 HYAEEK--PITDAL---DKGIA-------EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ~~~~~~--~~~~~~---~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ...... ..... .....+....+.+++.+|++.||++||++.|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 222 LIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 110000 000000 00000 0011123456789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=319.46 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=199.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 5778889999999999999998899999999985432 23345679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+||
T Consensus 80 ~~~~~~l~~~~-----------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~df 139 (279)
T cd06619 80 FMDGGSLDVYR-----------------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDF 139 (279)
T ss_pred cCCCCChHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeC
Confidence 99999997542 267788899999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhhcc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL---AEWAWRHYAEE 928 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~---~~~~~~~~~~~ 928 (1024)
|++...... ......++..|+|||++.+..++.++||||||+++|||++|+.||........ ...........
T Consensus 140 g~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 215 (279)
T cd06619 140 GVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE 215 (279)
T ss_pred Ccceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc
Confidence 999765322 22345789999999999999999999999999999999999999865321110 00000100000
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
. .... .....+.++.+++.+||+.+|++||++.|+++.
T Consensus 216 ~------~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 216 D------PPVL---PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred C------CCCC---CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0 0000 011233578899999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=333.03 Aligned_cols=240 Identities=23% Similarity=0.281 Sum_probs=189.7
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc---ccCceeeEEEEEecCCceEEEEeccCC
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI---RHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
||+|+||+||+|.+..+++.||||++.............+..|..++... +||||+++++++.+....|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999999989999999998654332333344566677777665 699999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 81 g~L~~~l~~~~-------------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~ 144 (330)
T cd05586 81 GELFWHLQKEG-------------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSK 144 (330)
T ss_pred ChHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCc
Confidence 99999987543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1024)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|..||.+.+.......+ .....
T Consensus 145 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~---- 214 (330)
T cd05586 145 ANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI----AFGKV---- 214 (330)
T ss_pred CCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH----HcCCC----
Confidence 542221 122345689999999998765 4899999999999999999999999875543322211 11110
Q ss_pred hccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 935 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
.+.. ......+.+++.+||+.||++||++.
T Consensus 215 ---~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 215 ---RFPK---NVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred ---CCCC---ccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 0000 11235778999999999999998543
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=326.85 Aligned_cols=260 Identities=25% Similarity=0.292 Sum_probs=207.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-c-----CceeeEEEEEecCC
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-H-----ANIVKLWCCISSEN 764 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----pniv~l~~~~~~~~ 764 (1024)
.+|.+.+.||+|+||.|.||.+..+++.||||+++... ....+...|+++|..++ | -|+|+++++|.-.+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 37889999999999999999999999999999996543 33567788999999996 4 39999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE- 843 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~- 843 (1024)
+.+||+|.+. .+|+++++...- ..++...++.|+.||+.||..||+. +|||+||||+|||+.+.
T Consensus 262 HlciVfELL~-~NLYellK~n~f-----------~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~ 326 (586)
T KOG0667|consen 262 HLCIVFELLS-TNLYELLKNNKF-----------RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPK 326 (586)
T ss_pred ceeeeehhhh-hhHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCC
Confidence 9999999995 899999998764 5689999999999999999999999 99999999999999765
Q ss_pred -CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 844 -FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 -~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
..|||+|||+|++.... ...+.-+..|+|||++.+.+|+.+.||||||||++||++|.+.|.+++..+....+.
T Consensus 327 r~~vKVIDFGSSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~ 401 (586)
T KOG0667|consen 327 RSRIKVIDFGSSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARII 401 (586)
T ss_pred cCceeEEecccccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHH
Confidence 47999999999875332 125677889999999999999999999999999999999987777766555443332
Q ss_pred HHhhc--------cCCchhhhcc---------------------------------CCC-------CcccHHHHHHHHHH
Q 001706 923 RHYAE--------EKPITDALDK---------------------------------GIA-------EPCYLEEMTTVYRL 954 (1024)
Q Consensus 923 ~~~~~--------~~~~~~~~~~---------------------------------~~~-------~~~~~~~~~~l~~l 954 (1024)
+..-. ........+. +.. .......-..+.++
T Consensus 402 e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~df 481 (586)
T KOG0667|consen 402 EVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDF 481 (586)
T ss_pred HHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHH
Confidence 21100 0000000000 000 00011223668999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001706 955 ALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 955 i~~cl~~dP~~RPs~~evl~ 974 (1024)
+++|+.+||.+|+|+.|+++
T Consensus 482 lk~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 482 LKRCLEWDPAERITPAQALN 501 (586)
T ss_pred HHHHhccCchhcCCHHHHhc
Confidence 99999999999999999985
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=321.91 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=205.5
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
...+|+..+.||+|+||.||+|....+++.||+|.+..... ...+.+.+|+.+++.++|||++++++++.++...++
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 35678889999999999999999988899999998854332 224678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|
T Consensus 95 v~e~~~~~~L~~~~~~~--------------~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl 157 (296)
T cd06654 95 VMEYLAGGSLTDVVTET--------------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 157 (296)
T ss_pred eecccCCCCHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 99999999999998642 367889999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||++....... .......+++.|+|||.+.+..++.++|||||||++|||++|+.||............ ....
T Consensus 158 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~---~~~~ 232 (296)
T cd06654 158 TDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNG 232 (296)
T ss_pred Cccccchhccccc--cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH---hcCC
Confidence 9999987653321 1123346889999999999988999999999999999999999999765432211111 0000
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.+ ....+......+.+++.+||..||++||++.|+++
T Consensus 233 ~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 233 TP---------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CC---------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00 01112234467889999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=334.68 Aligned_cols=259 Identities=20% Similarity=0.254 Sum_probs=198.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|.+.+.||+|+||.||+|.+...++.||||... ...+.+|++++++++||||+++++++...+..++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46888899999999999999999889999999642 134568999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|++. ++|.+++.... ..++|..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 240 e~~~-~~L~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~D 303 (461)
T PHA03211 240 PKYR-SDLYTYLGARL------------RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGD 303 (461)
T ss_pred EccC-CCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcc
Confidence 9995 78988886543 2489999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCc----chHHHHHHHhh
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT----SLAEWAWRHYA 926 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~----~~~~~~~~~~~ 926 (1024)
||+++...............||+.|+|||++.+..++.++|||||||++|||++|..++...... .....+.+...
T Consensus 304 FGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~ 383 (461)
T PHA03211 304 FGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIR 383 (461)
T ss_pred cCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHH
Confidence 99998764332222223456999999999999999999999999999999999998766532211 11111111111
Q ss_pred ccC----Cchh--------hh--------ccCCCCc---ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEK----PITD--------AL--------DKGIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~----~~~~--------~~--------~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... .... .. ....... ........+.+++.+||+.||.+|||+.|+++
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 384 QAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred hhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 100 0000 00 0000000 00112346889999999999999999999986
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=315.89 Aligned_cols=258 Identities=23% Similarity=0.317 Sum_probs=194.6
Q ss_pred ceeeecCcEEEEEEEEcC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccC
Q 001706 697 NLIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
+.||+|+||.||+|.... ++..+|+|.++.... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 368999999999998643 456799998854432 2334578999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
+|+|.+++....... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 79 ~g~L~~~l~~~~~~~--------~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 79 LGDLKGYLRSCRKAE--------LMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred CCcHHHHHHHhhhcc--------cccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccc
Confidence 999999997643210 12466788889999999999999998 9999999999999999999999999998
Q ss_pred eecccCCCCceecccccCcccCchhhccCC-------CCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-------KVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 855 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
+...............++..|+|||++.+. .++.++||||||+++|||++ |..||..............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~--- 224 (269)
T cd05087 148 HNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR--- 224 (269)
T ss_pred ccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh---
Confidence 754332222222334577889999988643 35789999999999999996 8888865443322221111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
.. ......+... ......+.+++..|| .+|++||+++||++.|+
T Consensus 225 ~~--~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 225 EQ--QLKLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cc--cCCCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00 0111111111 122356788999999 58999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=348.30 Aligned_cols=267 Identities=22% Similarity=0.336 Sum_probs=206.9
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCc
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENS 765 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~ 765 (1024)
...++|++.+.||+|+||+||+|.+...+..||+|++.... ........+.+|+.+++.++||||++++++|.+ ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 45678999999999999999999999999999999985432 233445789999999999999999999998854 356
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccC----CCceEeCCCCCCCEEEC
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC----TPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~Dlk~~Nill~ 841 (1024)
+|+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+.. ..+|+||||||+|||++
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~---------~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKM---------FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 89999999999999999754321 135899999999999999999999852 13599999999999996
Q ss_pred CC-----------------CcEEEeccccceecccCCCCceecccccCcccCchhhccC--CCCCCCCcchhHHHHHHHH
Q 001706 842 SE-----------------FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLEL 902 (1024)
Q Consensus 842 ~~-----------------~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGvil~el 902 (1024)
.+ +.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 42 358999999997653321 2234578999999999864 4588999999999999999
Q ss_pred HhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH--HHHhhcC
Q 001706 903 VTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL--QILRRCC 980 (1024)
Q Consensus 903 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~~~ 980 (1024)
++|..||....... .+......... .. ....+..+.++|..||+.+|.+||++.|++ ..+....
T Consensus 237 LTGk~PF~~~~~~~---qli~~lk~~p~--------lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 237 CSGKTPFHKANNFS---QLISELKRGPD--------LP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHCCCCCCcCCcHH---HHHHHHhcCCC--------CC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 99999997543321 11111111110 00 011236788999999999999999999998 4555554
Q ss_pred C
Q 001706 981 P 981 (1024)
Q Consensus 981 ~ 981 (1024)
+
T Consensus 303 ~ 303 (1021)
T PTZ00266 303 P 303 (1021)
T ss_pred C
Confidence 3
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=314.01 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=204.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+.|+..++||+|+||.||+|... +++.||+|.+..... ....+.+|+.++++++|||++++++++. .+..++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 357888999999999999999865 567899999854332 2357889999999999999999998874 4578999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++
T Consensus 79 ~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~ 144 (260)
T cd05067 79 TEYMENGSLVDFLKTPEG-----------IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIA 144 (260)
T ss_pred EEcCCCCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEc
Confidence 999999999999875432 3588999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||++........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||.+........... ..
T Consensus 145 dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~----~~ 219 (260)
T cd05067 145 DFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE----RG 219 (260)
T ss_pred cCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH----cC
Confidence 9999977643211 11223345678999999999999999999999999999999 888887654333222211 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
...+.+...+.++.+++.+||+.+|++||+++++...|+.
T Consensus 220 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 220 ----------YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1111122234679999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=330.56 Aligned_cols=265 Identities=24% Similarity=0.280 Sum_probs=202.5
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC----
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE---- 763 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---- 763 (1024)
...++|+..+.||+|+||.||+|.+...++.||||++..... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 457899999999999999999999988899999999864322 233456788999999999999999999988643
Q ss_pred --CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 764 --NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 764 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
...++||||++ +++.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 93 ~~~~~~lv~e~~~-~~l~~~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~ 153 (355)
T cd07874 93 EFQDVYLVMELMD-ANLCQVIQM---------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 153 (355)
T ss_pred ccceeEEEhhhhc-ccHHHHHhh---------------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEC
Confidence 35799999997 467666642 367888999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.++.+||+|||+++.... ........+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+........
T Consensus 154 ~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 230 (355)
T cd07874 154 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230 (355)
T ss_pred CCCCEEEeeCcccccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999976532 22233457899999999999999999999999999999999999999765432222211
Q ss_pred HHHhhccC---------Cchhhhc---------------cCC---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEK---------PITDALD---------------KGI---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~---------~~~~~~~---------------~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........ ....... ... ...........+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 11110000 0000000 000 00011112356789999999999999999999997
Q ss_pred H
Q 001706 975 I 975 (1024)
Q Consensus 975 ~ 975 (1024)
.
T Consensus 311 h 311 (355)
T cd07874 311 H 311 (355)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=326.62 Aligned_cols=271 Identities=25% Similarity=0.375 Sum_probs=209.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS 762 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 762 (1024)
.+|++.+.||+|+||.||+|.... .+..||+|.++... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 368889999999999999997632 22368999875432 234457899999999999 79999999999999
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccC---CCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEE
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSG---SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nil 839 (1024)
.+..++||||+++|+|.+++.......... ........++|..+..++.|++.|++|||+. +++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence 999999999999999999998643211000 0011234588999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchH
Q 001706 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 918 (1024)
Q Consensus 840 l~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~ 918 (1024)
++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+.......
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999987643222222222334568999999999999999999999999999999 67777654432222
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
..+. ... ..+.+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 247 ~~~~----~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 247 KLLK----EGH----------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHH----cCC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 2111 111 11112233467889999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=313.84 Aligned_cols=253 Identities=28% Similarity=0.454 Sum_probs=201.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|...+.||+|++|.||+|..... ..||+|.+.... ...+.+.+|++++++++|||++++++++. .+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 4578888999999999999988654 469999875432 12457889999999999999999998875 45688999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|
T Consensus 80 e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~d 145 (260)
T cd05069 80 EFMGKGSLLDFLKEGDG-----------KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIAD 145 (260)
T ss_pred EcCCCCCHHHHHhhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECC
Confidence 99999999999975432 3478999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++....... .......++..|+|||...+..++.++||||||+++|||++ |..||.+........+. ....
T Consensus 146 fg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~ 220 (260)
T cd05069 146 FGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV----ERGY 220 (260)
T ss_pred CccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCC
Confidence 999987643221 11122345678999999999999999999999999999999 77787654433222221 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
..+.+...+..+.+++.+||+.||++||+++++++.|++
T Consensus 221 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 ----------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111222345788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=324.85 Aligned_cols=265 Identities=21% Similarity=0.315 Sum_probs=203.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|...+.||+|+||.||+|.+..+++.||+|++..... ......+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 3578889999999999999999988899999999864332 22234677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~ 146 (309)
T cd07872 83 FEYLD-KDLKQYMDDCG------------NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLA 146 (309)
T ss_pred EeCCC-CCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEC
Confidence 99997 58888886543 2478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||+++...... .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.+..+............
T Consensus 147 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 224 (309)
T cd07872 147 DFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTP 224 (309)
T ss_pred ccccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999997643221 12233467899999998865 468899999999999999999999997665443332222211100
Q ss_pred C-----------CchhhhccCCCC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 K-----------PITDALDKGIAE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~-----------~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .....-...... ......+.++.+++.+|++.||.+|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 225 TEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 000000000000 000122457789999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=316.02 Aligned_cols=262 Identities=27% Similarity=0.372 Sum_probs=201.1
Q ss_pred ceeeecCcEEEEEEEEcCCCc--EEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEecc
Q 001706 697 NLIGSGGSGQVYRIDINGAGE--FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYEYM 773 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 773 (1024)
+.||+|+||.||+|....++. .+|+|.++... .....+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999877665 46888875322 234456789999999999 7999999999999999999999999
Q ss_pred CCCCHHHHhccCcccccc---CCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 774 ENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 774 ~~gsL~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
++|+|.+++......... .........+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 999999999865421100 00011123588999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||++...... ........+..|+|||++....++.++|||||||++|||++ |..||.+.......... ....
T Consensus 156 fgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~----~~~~ 228 (270)
T cd05047 156 FGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL----PQGY 228 (270)
T ss_pred CCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH----hCCC
Confidence 9998632111 11111234567999999998899999999999999999997 88888654433222211 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
....+......+.+++.+||+.+|.+||++.|+++.|+++.
T Consensus 229 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 ----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 01111223457889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.13 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=202.3
Q ss_pred ceeeecCcEEEEEEEEcC-CC--cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEecc
Q 001706 697 NLIGSGGSGQVYRIDING-AG--EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 773 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 773 (1024)
+.||+|++|.||+|.+.. .+ ..||||.+...... ...+.+.+|++++++++||||+++++.+.+ ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999998754 33 36999998654432 556789999999999999999999999988 8899999999
Q ss_pred CCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccc
Q 001706 774 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGL 853 (1024)
Q Consensus 774 ~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgl 853 (1024)
++++|.+++..... ..++|..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+
T Consensus 78 ~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~ 143 (257)
T cd05040 78 PLGSLLDRLRKDAL-----------GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGL 143 (257)
T ss_pred CCCcHHHHHHhccc-----------ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccc
Confidence 99999999986441 2478999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 854 AKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 854 a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
++.+........ .....++..|+|||++.+..++.++|||||||++|||++ |..||.............. ...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~~~-- 218 (257)
T cd05040 144 MRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK---EGE-- 218 (257)
T ss_pred cccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---cCC--
Confidence 987654322222 123456789999999999999999999999999999999 8888865443332222211 000
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
....+...+..+.+++.+||+.+|++||+++|+++.|.
T Consensus 219 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 --------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01112233468899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=314.34 Aligned_cols=253 Identities=26% Similarity=0.343 Sum_probs=204.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh------hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL------NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
.|...+.||+|++|.||+|....+++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999999888899999988644322 12334679999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~ 144 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-------------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGG 144 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-------------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCC
Confidence 999999999999999997543 378889999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCC----ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 846 AKIADFGLAKMLAKQGEP----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
++|+|||.++........ .......++..|+|||.+.+..++.++||||+|+++|||++|+.||........ .
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~ 221 (267)
T cd06628 145 IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---I 221 (267)
T ss_pred EEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---H
Confidence 999999999876432111 111234578899999999999999999999999999999999999975432211 1
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... . ......+...+..+.+++.+||+.||++||++.|+++
T Consensus 222 ~~~~-~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 222 FKIG-E----------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHh-c----------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1100 0 0111122234478899999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=315.51 Aligned_cols=257 Identities=22% Similarity=0.295 Sum_probs=191.7
Q ss_pred eeeecCcEEEEEEEEcC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 698 LIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
.||+|+||.||+|.... ....+|+|.+.... .......+.+|+++++.++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996532 34578899775332 234456789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.+++...... .....++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 80 g~L~~~l~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 80 GDLKNYLRSNRGM--------VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred CcHHHHHHhcccc--------ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccc
Confidence 9999999765431 112356788899999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccC-------CCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhc
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYT-------TKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
...............++..|+|||+... ..++.++|||||||++|||++ |..||............ ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~ 225 (269)
T cd05042 149 EQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV---VRE 225 (269)
T ss_pred ccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH---hhc
Confidence 5433222222233446778999998753 356889999999999999999 55666544332221111 111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
.. ....... .....+..+.+++..|| .||++||+++||++.|.
T Consensus 226 ~~--~~~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 226 QD--IKLPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cC--ccCCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 10 0111111 11223466778999999 59999999999999873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=312.82 Aligned_cols=249 Identities=28% Similarity=0.420 Sum_probs=205.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||.|+||.||+|... ++.||||.++.... ..+++.+|+.+++.++|+||+++++++.+....++||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 46788899999999999999874 78899999865432 4578999999999999999999999999899999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|
T Consensus 80 e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d 145 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-----------AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSD 145 (256)
T ss_pred EecCCCcHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcc
Confidence 99999999999976542 2489999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.++...... .....+..|+|||++.+..++.++||||||+++||+++ |..||............. ...
T Consensus 146 ~g~~~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~----~~~ 216 (256)
T cd05039 146 FGLAKEASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE----KGY 216 (256)
T ss_pred ccccccccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh----cCC
Confidence 99998653221 12334668999999998899999999999999999997 888876543332222211 110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
....+...+..+.+++.+||+.+|++||++.|++++|+.
T Consensus 217 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 217 ----------RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ----------CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 011112234788999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=330.51 Aligned_cols=264 Identities=24% Similarity=0.292 Sum_probs=202.5
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC----
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE---- 763 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---- 763 (1024)
...++|+..+.||+|+||.||+|.+...++.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 356789999999999999999999988899999999864322 233356788999999999999999999887543
Q ss_pred --CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 764 --NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 764 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
...|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 160 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQM---------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHh---------------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEEC
Confidence 35799999997 577776642 367888999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.++.+||+|||+++.... ........+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+
T Consensus 161 ~~~~~kL~DfG~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 237 (364)
T cd07875 161 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237 (364)
T ss_pred CCCcEEEEeCCCccccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999976532 22223457899999999999999999999999999999999999999766543322222
Q ss_pred HHHhhccCC---------chhhhc--------------cCC----CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEKP---------ITDALD--------------KGI----AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~~---------~~~~~~--------------~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........+ +..... ... ...........+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 211100000 000000 000 00001112356789999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=319.18 Aligned_cols=269 Identities=27% Similarity=0.378 Sum_probs=204.3
Q ss_pred CCCccceeeecCcEEEEEEEE----cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--Cc
Q 001706 692 SLTESNLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NS 765 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 765 (1024)
-|++.+.||+|+||.||+++. ..++..||+|.++... .....+.+.+|+++++.++|||++++++++.+. ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 367788999999999999974 3457889999986432 234456899999999999999999999998775 56
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++++|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 147 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK------------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 147 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCC
Confidence 899999999999999986543 2478999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
++|+|||+++.+........ .....++..|+|||.+.+..++.++||||||+++|||++++.|+....... .. ....
T Consensus 148 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-~~-~~~~ 225 (284)
T cd05079 148 VKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-LK-MIGP 225 (284)
T ss_pred EEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh-hh-hccc
Confidence 99999999987644322211 223456778999999998899999999999999999999887653211000 00 0000
Q ss_pred hhccCC---chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 925 YAEEKP---ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 925 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
...... .......+...+.+...+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 226 THGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000 0000111111112223457899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=311.39 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=217.1
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
..+..-|...+.||+|.|+.|-.|++.-+|+.||||++.+.. .+......+.+|++.|+.++|||||++|++...+...
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTK-lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKl 92 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKL 92 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccc-cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceE
Confidence 344556788899999999999999999999999999996543 3455567899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC-CCCc
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD-SEFK 845 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~ 845 (1024)
|+|.|.-++|+|++|+-++.. .+.+....+++.||..|+.|+|+. .+|||||||+||.+- .-|-
T Consensus 93 yLiLELGD~GDl~DyImKHe~------------Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGl 157 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEE------------GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGL 157 (864)
T ss_pred EEEEEecCCchHHHHHHhhhc------------cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCc
Confidence 999999999999999987653 588899999999999999999998 999999999998765 4589
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCC-CCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVN-EKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
||+.|||++-.+.++. ..+..+|+..|-|||++.+..|+ ++.||||+|||||-+++|+.||....+.+..
T Consensus 158 VKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL------ 228 (864)
T KOG4717|consen 158 VKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL------ 228 (864)
T ss_pred eEeeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh------
Confidence 9999999998876543 33456899999999999999996 5799999999999999999999876554332
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..++|... ..+...+.++.++|..|+..||.+|.+..||+.
T Consensus 229 -------TmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 229 -------TMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -------hhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 33344333 235667789999999999999999999999985
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=332.96 Aligned_cols=260 Identities=24% Similarity=0.270 Sum_probs=200.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
..+|.+.+.||+|+||.||++...+ .+..||||.+... +...+|+++++.++||||+++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 4578999999999999999997643 4578999987432 23568999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+. ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++
T Consensus 163 lv~e~~~-~~l~~~l~~~-------------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~ 225 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS-------------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAV 225 (392)
T ss_pred EEehhcC-CCHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEE
Confidence 9999996 7888888432 2488999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
|+|||+++...............||+.|+|||++.+..++.++||||+||++|||++|+.||.+................
T Consensus 226 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~ 305 (392)
T PHA03207 226 LGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRC 305 (392)
T ss_pred EccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHH
Confidence 99999998765443333334567999999999999999999999999999999999999999875543222211111100
Q ss_pred c--CCc----------hhh---hccCCCCccc-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 E--KPI----------TDA---LDKGIAEPCY-------LEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~--~~~----------~~~---~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .+. ... .......+.. .....++.+++.+|+..||++||++.|++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 306 MQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred hccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 000 000 0000000000 112356788999999999999999999986
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=310.54 Aligned_cols=248 Identities=25% Similarity=0.369 Sum_probs=199.0
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
++||+|+||.||+|... ++..||+|.+.... .......+.+|+++++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 36899999999999865 57889999885432 2344567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... ..+++..+..++.|++.|+.|+|+. +++||||+|+||+++.++.+|++|||++..
T Consensus 78 ~L~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 78 DFLSFLRKKK------------DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred cHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCcccee
Confidence 9999987533 2378999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
..... ........++..|+|||++.+..++.++||||||+++||+++ |..||.+.........+ ....
T Consensus 143 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~----~~~~------ 211 (250)
T cd05085 143 EDDGI-YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV----EKGY------ 211 (250)
T ss_pred ccccc-cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH----HcCC------
Confidence 43221 111122334678999999999999999999999999999998 88888655433222211 1111
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
....+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 212 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 212 ----RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11111223468899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=314.12 Aligned_cols=255 Identities=29% Similarity=0.433 Sum_probs=206.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.||+|+||.||+|... ++..||||.+..... ..+++.+|++++++++||||+++++++......++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 457888999999999999999876 457799998854321 246789999999999999999999999998999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++
T Consensus 80 ~e~~~~~~L~~~i~~~~~-----------~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~ 145 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEG-----------KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIA 145 (261)
T ss_pred EeccCCCCHHHHHhcccc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEEC
Confidence 999999999999976442 3588999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||.+..+.... .........+..|+|||.+.+..++.++||||+|+++||+++ |+.||.+.............
T Consensus 146 d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~---- 220 (261)
T cd05034 146 DFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG---- 220 (261)
T ss_pred ccccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----
Confidence 999998764321 111122234568999999999999999999999999999999 88888654433222222111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
...+.+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 ----------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 ----------YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111122234678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=311.05 Aligned_cols=253 Identities=25% Similarity=0.338 Sum_probs=208.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|+..+.||.|+||.||.++...+++.|++|.+..... .....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 47788999999999999999988999999998854322 23445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+||
T Consensus 80 ~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~ 145 (256)
T cd08221 80 YANGGTLYDKIVRQKG-----------QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDF 145 (256)
T ss_pred ecCCCcHHHHHHhccc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcC
Confidence 9999999999986532 3478899999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|++........ ......+++.|+|||...+..++.++||||||+++|||++|..||............. ...
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~----~~~-- 217 (256)
T cd08221 146 GISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV----QGN-- 217 (256)
T ss_pred cceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----cCC--
Confidence 99987643321 2234568999999999998889999999999999999999999987654332222111 110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..+.....+.++.+++.+||+.+|++||++.|+++.
T Consensus 218 --------~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 218 --------YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --------CCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 011112334678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=310.18 Aligned_cols=250 Identities=28% Similarity=0.389 Sum_probs=200.2
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
++||+|+||.||+|.+.. ++.||+|.+..... ......+.+|++++++++||||+++++++.+....++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999877 89999998854432 234578999999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
+|.+++.... ..+++..+..++.+++.|++|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 78 ~l~~~l~~~~------------~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 78 SLLTFLRKKK------------NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred cHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 9999997533 2378889999999999999999998 999999999999999999999999999876
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
...............+..|+|||.+.+..++.++|||||||++|||++ |..||............. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~----~-------- 210 (251)
T cd05041 143 EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE----S-------- 210 (251)
T ss_pred ccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh----c--------
Confidence 532211111112234567999999998899999999999999999999 666765544322222211 1
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
......+...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 211 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 211 --GYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred --CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 01111222345689999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=310.79 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=204.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-CCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-ENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~ 770 (1024)
+|+..+.||+|++|.||++....+++.||+|++.... ......+.+.+|++++++++|||++++++.+.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN-ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh-cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4788899999999999999998889999999985432 223445678999999999999999999988764 44678999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 80 e~~~~~~l~~~l~~~~~-----------~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~d 145 (257)
T cd08223 80 GFCEGGDLYHKLKEQKG-----------KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGD 145 (257)
T ss_pred cccCCCcHHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEec
Confidence 99999999999975432 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++....... .......+++.|+|||++.+..++.++||||+|+++|||++|+.||...+......... ...
T Consensus 146 f~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~----~~~- 218 (257)
T cd08223 146 LGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRII----EGK- 218 (257)
T ss_pred ccceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH----hcC-
Confidence 99998764322 12234568899999999999999999999999999999999999987544322211111 110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
....+...+..+.+++.+||+.||++||++.|+++
T Consensus 219 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 219 ---------LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ---------CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 01122334468999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=323.70 Aligned_cols=265 Identities=21% Similarity=0.243 Sum_probs=198.5
Q ss_pred ccceeeec--CcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 695 ESNLIGSG--GSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 695 ~~~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
..++||+| +|++||++....+++.||+|++..... .....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 35689999 789999999999999999999865432 233456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+
T Consensus 81 ~~~~~l~~~~~~~~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~ 146 (327)
T cd08227 81 MAYGSAKDLICTHFM-----------DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR 146 (327)
T ss_pred cCCCcHHHHHHhhcc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccc
Confidence 999999999975432 2478999999999999999999998 99999999999999999999999998
Q ss_pred cceecccCCCCc-----eecccccCcccCchhhccC--CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 853 LAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 853 la~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
.+......+... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (327)
T cd08227 147 SNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT 226 (327)
T ss_pred hhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCC
Confidence 765432211111 1122346778999999876 468899999999999999999999997533222111110000
Q ss_pred hcc--------------CCchhhhc-----------------cCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEE--------------KPITDALD-----------------KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~--------------~~~~~~~~-----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... .......+ .....+........+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 227 VPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 00000000 00001112233467899999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=313.58 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=195.0
Q ss_pred ceeeecCcEEEEEEEEcC---CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEe-cCCceEEEEec
Q 001706 697 NLIGSGGSGQVYRIDING---AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS-SENSKLLVYEY 772 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~e~ 772 (1024)
+.||+|+||.||+|.... ....||+|++... ......+.+.+|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998643 3457999987432 12334578889999999999999999999765 45668999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++..... ...+..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 79 ~~~~~L~~~~~~~~~------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 79 MKHGDLRNFIRSETH------------NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred CCCCCHHHHHHhcCC------------CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcc
Confidence 999999999975432 356778889999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCC--ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC-CCCcchHHHHHHHhhccC
Q 001706 853 LAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG-DEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 853 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~ 929 (1024)
+++........ .......++..|+|||.+.+..++.++|||||||++|||++|+.|+.. .+........ ....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~----~~~~ 219 (262)
T cd05058 144 LARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL----LQGR 219 (262)
T ss_pred ccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----hcCC
Confidence 99765332111 111233456789999999989999999999999999999997665443 3222222111 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
....+...+..+.+++..||+.+|++||++.|+++.|+++.
T Consensus 220 ----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 ----------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 11111223467889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=316.11 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=201.3
Q ss_pred ceeeecCcEEEEEEEEcCCC------cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 697 NLIGSGGSGQVYRIDINGAG------EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.||+|+||.||+|+..... +.||+|.+.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 46899999999999875433 679999875432 1233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-----c
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-----K 845 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~ 845 (1024)
||+++++|.+++....... .....+++..++.++.|++.|++|||+. +++|+||+|+||+++.++ .
T Consensus 79 e~~~~~~L~~~l~~~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 79 ELMEGGDLLSYLRDARVER------FGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred eccCCCcHHHHHHHhhhcc------cCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcc
Confidence 9999999999997543210 0123478999999999999999999988 999999999999999887 8
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
++++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...........+
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~--- 226 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV--- 226 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH---
Confidence 99999999976543322222223345688999999999999999999999999999998 88888654432222211
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
.... ....+...+..+.+++.+||+.+|++||+++++.+.|++
T Consensus 227 -~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 227 -TAGG----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -hcCC----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1110 111122345678899999999999999999999998863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=303.78 Aligned_cols=249 Identities=23% Similarity=0.325 Sum_probs=209.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
-|.+..++|+|+||.||+|.++.+|+.||+|.+..+.. .+++..|+.++++++.|++|++||.|......++|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 46677899999999999999999999999999865443 5789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
||..|+..+.++.+.+ .+.+..+..+....+.||+|||.. .-+|||||+.|||++.+|.+|++||
T Consensus 109 YCGAGSiSDI~R~R~K------------~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADF 173 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRK------------PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADF 173 (502)
T ss_pred hcCCCcHHHHHHHhcC------------CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhc
Confidence 9999999999987654 588999999999999999999998 8899999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.|..+.+ .........||+.|||||++..-.|..++||||+|++..||..|++||.+-.+-. .-+. +
T Consensus 174 GVAGQLTD--TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR------AIFM----I 241 (502)
T KOG0574|consen 174 GVAGQLTD--TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR------AIFM----I 241 (502)
T ss_pred cccchhhh--hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc------eeEe----c
Confidence 99976533 2223345789999999999999999999999999999999999999986422110 0000 0
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.-...+.+ ..++..+.++-++++.|+-+.|++|.++.++++
T Consensus 242 PT~PPPTF--~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 242 PTKPPPTF--KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred cCCCCCCC--CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 00111112 235677889999999999999999999998875
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=316.96 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=205.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||+||++....+++.||+|++.... .....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 56888899999999999999998889999999885432 2344678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++...+ .+++..+..++.+++.|+.|||+. .+++||||+|+||+++.++.++|+|
T Consensus 83 e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d 147 (284)
T cd06620 83 EFMDCGSLDRIYKKGG-------------PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCD 147 (284)
T ss_pred ecCCCCCHHHHHHhcc-------------CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEcc
Confidence 9999999999987533 378999999999999999999963 1899999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc--------hHHHHH
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS--------LAEWAW 922 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~--------~~~~~~ 922 (1024)
||++....... .....|+..|+|||++.+..++.++|||||||++||+++|+.||....... ......
T Consensus 148 ~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd06620 148 FGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ 223 (284)
T ss_pred CCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHH
Confidence 99986542211 123468999999999988899999999999999999999999997543311 111111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..... ..........+..+.+++.+||+.||++||++.|+++.
T Consensus 224 ~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 224 QIVQE----------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HHhhc----------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11110 00011112244678999999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=319.96 Aligned_cols=260 Identities=21% Similarity=0.285 Sum_probs=206.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||++.....++.||+|.+...........+.+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 57888999999999999999998999999999865433334445688899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 82 ~~~g~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~df 145 (305)
T cd05609 82 YVEGGDCATLLKNIG-------------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDF 145 (305)
T ss_pred cCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeC
Confidence 999999999997543 378899999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCC-------------CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchH
Q 001706 852 GLAKMLAKQG-------------EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918 (1024)
Q Consensus 852 gla~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~ 918 (1024)
|+++...... .........++..|+|||.+.+..++.++|+||||+++|||++|..||.+.......
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~ 225 (305)
T cd05609 146 GLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 225 (305)
T ss_pred CCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9986421100 000111245788999999999889999999999999999999999999765433222
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.... ...... .. .....+..+.+++.+||+.||++||++.++.+.++..
T Consensus 226 ~~~~---~~~~~~-----~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 226 GQVI---SDDIEW-----PE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHH---hcccCC-----CC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 2111 110000 00 0012346789999999999999999987777666553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=316.27 Aligned_cols=271 Identities=29% Similarity=0.389 Sum_probs=208.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcC----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CC
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--EN 764 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~ 764 (1024)
+.|+..+.||+|+||.||+|.... ++..||||++...... ...+.+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 356777899999999999998643 4788999998654332 346789999999999999999999999877 55
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~------------~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~ 146 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD------------QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESED 146 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc------------ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCC
Confidence 78999999999999999986442 488999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCcee-cccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTM-SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
.++++|||.+............ ....++..|+|||...+..++.++||||||+++|||++|+.|+......... ++..
T Consensus 147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~ 225 (284)
T cd05038 147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR-MIGI 225 (284)
T ss_pred CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc-cccc
Confidence 9999999999876533222221 1234556799999999889999999999999999999999987643221100 0000
Q ss_pred Hh--hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 924 HY--AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 924 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
.. .....+.+.+......+.+..++.++.+++.+||+.+|++||++.|++++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 226 AQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00 000000111111112222233447899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=318.38 Aligned_cols=266 Identities=24% Similarity=0.343 Sum_probs=201.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||+|....+++.||||+++.... .....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 47788999999999999999988899999999854322 22234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++ ++|.+++..... ...+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++|+||
T Consensus 80 ~~~-~~l~~~~~~~~~----------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 145 (285)
T cd07861 80 FLS-MDLKKYLDSLPK----------GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADF 145 (285)
T ss_pred cCC-CCHHHHHhcCCC----------CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcc
Confidence 997 689888875432 13588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc---
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE--- 927 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 927 (1024)
|++...... ........+++.|+|||.+.+. .++.++||||+||++|||++|+.||.+...........+....
T Consensus 146 g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T cd07861 146 GLARAFGIP--VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTE 223 (285)
T ss_pred cceeecCCC--cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 998765322 1122334568899999988654 5788999999999999999999998765432211111110000
Q ss_pred --------cCCchhhhcc---CCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 --------EKPITDALDK---GIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 --------~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.......... ..........+.++.+++.+||+.||++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 224 DVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 0000001113467789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=317.64 Aligned_cols=260 Identities=25% Similarity=0.326 Sum_probs=209.5
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
+...+|+..+.||+|+||.||+|....+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 445789999999999999999999988899999999854322 23466889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++
T Consensus 93 lv~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~ 155 (297)
T cd06656 93 VVMEYLAGGSLTDVVTET--------------CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVK 155 (297)
T ss_pred EeecccCCCCHHHHHHhC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 999999999999998642 367889999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
|+|||++....... .......+++.|+|||...+..++.++|||||||++|+|++|..||...+......... ..
T Consensus 156 l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~---~~ 230 (297)
T cd06656 156 LTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TN 230 (297)
T ss_pred ECcCccceEccCCc--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec---cC
Confidence 99999987653321 11233568889999999999899999999999999999999999997654321111000 00
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcCC
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCCP 981 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 981 (1024)
..+ ....+...+..+.+++.+||+.+|++||+++++++ .++.+.+
T Consensus 231 ~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 231 GTP---------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred CCC---------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 000 00112233466889999999999999999999997 5555554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=315.30 Aligned_cols=250 Identities=23% Similarity=0.321 Sum_probs=200.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|++.+.||+|+||.||+|....++..+|+|.+... .....+.+.+|+++++.++|||++++++++...+..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 56778899999999999999988999999988432 233456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|..++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||
T Consensus 84 ~~~~~l~~~~~~~~------------~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg 148 (282)
T cd06643 84 CAGGAVDAVMLELE------------RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFG 148 (282)
T ss_pred cCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccc
Confidence 99999999886432 2488999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
++...... ........++..|+|||++. +..++.++|||||||++|||++|+.||............ ...
T Consensus 149 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~ 223 (282)
T cd06643 149 VSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKS 223 (282)
T ss_pred cccccccc--ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHH---hhc
Confidence 98765322 11223456889999999874 445788999999999999999999998754432211111 111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+ . ...+...+..+.+++.+||+.||++||++.++++
T Consensus 224 ~~~-------~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 224 EPP-------T--LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CCC-------C--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0 0112223467899999999999999999998865
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=316.43 Aligned_cols=265 Identities=23% Similarity=0.346 Sum_probs=203.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+++++.++|||++++++++.+....++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 367888999999999999999988899999998854322 2223456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|..+..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|
T Consensus 80 e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~d 143 (286)
T cd07847 80 EYCDHTVLNELEKNPR-------------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCD 143 (286)
T ss_pred eccCccHHHHHHhCCC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECc
Confidence 9999998888765432 388999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||++........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+.............
T Consensus 144 fg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T cd07847 144 FGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLI 221 (286)
T ss_pred cccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999987644321 1223457889999999876 4678999999999999999999999976554322221111110000
Q ss_pred ----------Cc-hhhhccCCCC-----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 ----------PI-TDALDKGIAE-----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ----------~~-~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. .....+.... ......+..+.+++.+||+.||++||++.|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 222 PRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 0000000000 001122467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=314.08 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=202.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|....+++.||+|.++... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 457888899999999999999998889999999985432 22345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++|+
T Consensus 85 ~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~ 148 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG-------------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLA 148 (267)
T ss_pred EeccCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEC
Confidence 99999999999987543 378899999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|||++...... ........|+..|+|||++. ...++.++||||+||++|||++|..||.......... ....
T Consensus 149 dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~---~~~~ 223 (267)
T cd06645 149 DFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTK 223 (267)
T ss_pred cceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH---hhhc
Confidence 99998765322 12223457899999999874 4568899999999999999999999986543221111 0000
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ..... .....+..+.+++.+|++.+|++||+++++++
T Consensus 224 ~~~~-----~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 224 SNFQ-----PPKLK--DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cCCC-----CCccc--ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000 00000 00112356889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=310.03 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=206.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||++....+++.||+|.+..... .....+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 47888999999999999999988899999999854322 23345688999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++..... ..+++..+.+++.|++.|++|||+. +++|+||+|+||+++.++.++++||
T Consensus 80 ~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~ 145 (256)
T cd08218 80 YCEGGDLYKKINAQRG-----------VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDF 145 (256)
T ss_pred cCCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeec
Confidence 9999999999975432 2478889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+..+.... .......+++.|+|||++.+..++.++|||||||++|||++|+.||...+.......+ ....
T Consensus 146 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~---~~~~--- 217 (256)
T cd08218 146 GIARVLNSTV--ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI---IRGS--- 217 (256)
T ss_pred cceeecCcch--hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH---hcCC---
Confidence 9997653321 1122345788999999999999999999999999999999999998755433222211 1111
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
....+......+.+++.+||+.+|++||++.|+++
T Consensus 218 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 218 --------YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --------CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 01112233467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=312.72 Aligned_cols=258 Identities=25% Similarity=0.342 Sum_probs=205.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 767 (1024)
++|+..+.||+|+||.||+|..... ...||||...... .....+.+.+|+.+++.++||||+++++++.+ ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 3577889999999999999987533 3469999875433 23445789999999999999999999998875 4578
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++
T Consensus 83 lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK------------YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeE
Confidence 9999999999999997543 2478999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
++|||+++...... ........++..|+|||.+....++.++||||||+++||+++ |..||.+.......... .
T Consensus 148 l~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~----~ 222 (270)
T cd05056 148 LGDFGLSRYLEDES-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI----E 222 (270)
T ss_pred EccCceeeeccccc-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----H
Confidence 99999998764332 112223334568999999988889999999999999999986 99998765433222211 1
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
.... ...+...+..+.+++.+||..+|++||++.++++.|++...
T Consensus 223 ~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 223 NGER----------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred cCCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111 11122334688999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=318.43 Aligned_cols=257 Identities=25% Similarity=0.339 Sum_probs=207.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
...|+..+.||.|++|.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++|||++++++++.+.+..++|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 456888899999999999999998899999999885432 22346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 95 ~e~~~~~~L~~~~~~--------------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~ 157 (296)
T cd06655 95 MEYLAGGSLTDVVTE--------------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLT 157 (296)
T ss_pred EEecCCCcHHHHHHh--------------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEc
Confidence 999999999998863 2378999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||++........ ......++..|+|||.+.+..++.++|||||||++|||++|+.||...+.......... ...
T Consensus 158 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~---~~~ 232 (296)
T cd06655 158 DFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NGT 232 (296)
T ss_pred cCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCC
Confidence 9999876533211 12334688899999999998999999999999999999999999976553222111111 000
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 980 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 980 (1024)
+ ....+...+..+.+++.+||+.||++||++.++++ .++.+.
T Consensus 233 ~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 233 P---------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred c---------ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0 00112233467889999999999999999999984 444433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=315.30 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=199.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC-----
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE----- 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~----- 763 (1024)
...|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +||||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 346788889999999999999999899999999985432 2235788999999998 799999999998653
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~-----------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~ 146 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG-----------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTE 146 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECC
Confidence 457899999999999999986432 3588999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++.++|+|||++...... ........|+..|+|||++. +..++.++||||+||++|||++|+.||........
T Consensus 147 ~~~~~l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~ 224 (272)
T cd06637 147 NAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA 224 (272)
T ss_pred CCCEEEccCCCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 999999999999765322 11233456889999999886 34678899999999999999999999865432211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... . .. .........+..+.+++.+||+.||.+||+++|+++
T Consensus 225 ~~~~~----~-~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 225 LFLIP----R-NP--------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHh----c-CC--------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11110 0 00 001111123457889999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=310.27 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=198.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCceE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENSKL 767 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~ 767 (1024)
+|+..+.||+|+||.||+|....++..||+|++..... ...+....+.+|+.+++.++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 57888999999999999999988899999998854322 123345678999999999999999999998865 35678
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+++||+++++|.+++.... .+++...+.++.|++.||+|||+. +|+||||+|+||+++.++.++
T Consensus 83 l~~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~ 146 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG-------------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVK 146 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEE
Confidence 9999999999999997543 378888999999999999999988 999999999999999999999
Q ss_pred EeccccceecccCCC-CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|+|||+++....... ........++..|+|||.+.+..++.++||||+||++|||++|+.||...+... .......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~---~~~~~~~ 223 (266)
T cd06651 147 LGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA---AIFKIAT 223 (266)
T ss_pred EccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH---HHHHHhc
Confidence 999999876532111 111223457889999999999999999999999999999999999987543211 1111100
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. .....+......+.+++ .||..+|++||+++|+++
T Consensus 224 ~~----------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 224 QP----------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CC----------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00 01111222335566676 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=309.56 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=204.1
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|... .+..||+|.+... ....+.+.+|++++++++|+||+++++++.+ ...++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 457888999999999999999865 4567999987542 2234678999999999999999999999887 778999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+
T Consensus 79 ~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~ 144 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEG-----------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIA 144 (260)
T ss_pred EEeCCCCcHHHHHHhCCc-----------cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEEC
Confidence 999999999999976432 3478899999999999999999988 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||.+....... ........++..|+|||++....++.++|+|||||++||+++ |..||...+......+.. ..
T Consensus 145 d~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~----~~ 219 (260)
T cd05073 145 DFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE----RG 219 (260)
T ss_pred CCcceeeccCCC-cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh----CC
Confidence 999997654321 111222345678999999998899999999999999999999 777876654433322221 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
. ..+.....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 220 ~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 220 Y----------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred C----------CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1 111122334678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=309.85 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=205.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.||+|.+..... .+.+.+|++++++++||||+++++++.+....++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578889999999999999999988889999999854321 578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 78 e~~~~~~L~~~l~~~~------------~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~d 142 (256)
T cd06612 78 EYCGAGSVSDIMKITN------------KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLAD 142 (256)
T ss_pred ecCCCCcHHHHHHhCc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcc
Confidence 9999999999997533 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++........ ......++..|+|||++.+..++.++||||||+++|||++|+.||............ ..
T Consensus 143 fg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~----~~--- 213 (256)
T cd06612 143 FGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI----PN--- 213 (256)
T ss_pred cccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh----cc---
Confidence 999987643221 223345788999999999999999999999999999999999998754332111100 00
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ..+......+.+++.+||+.||++||++.|+++
T Consensus 214 ---~~~~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 214 ---KPPPTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---CCCCCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000001 112233467899999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=314.98 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=202.1
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.|++.+.||.|+||.||+|++..++..||+|++... .....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5688899999999999999999988999999998543 2344677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|..++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 89 e~~~~~~l~~~~~~~~------------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 153 (292)
T cd06644 89 EFCPGGAVDAIMLELD------------RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLAD 153 (292)
T ss_pred ecCCCCcHHHHHHhhc------------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEcc
Confidence 9999999998876433 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||.+...... ........+++.|+|||++. ...++.++|||||||++|||++|..||......... ...
T Consensus 154 fg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~ 227 (292)
T cd06644 154 FGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL----LKI 227 (292)
T ss_pred Cccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH----HHH
Confidence 9998754221 12223456888999999885 345788999999999999999999998654422111 111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... .. ...+...+.++.+++.+||+.||++||++.|+++
T Consensus 228 ~~~~~------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 228 AKSEP------PT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred hcCCC------cc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11100 00 0112233457889999999999999999999865
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=309.74 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=207.0
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK---LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
+|+..+.||+|++|.||+|....+++.||+|++..... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47778999999999999999988899999999864332 112345789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-cEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAK 847 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~k 847 (1024)
||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++ .++
T Consensus 81 v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~ 144 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-------------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLR 144 (268)
T ss_pred EEeccCCCcHHHHHHHhC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 999999999999997533 378899999999999999999998 999999999999998876 599
Q ss_pred EeccccceecccCCCC--ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 848 IADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|+|||.+..+...... .......++..|+|||.+.+..++.++||||+|+++|||++|..||................
T Consensus 145 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (268)
T cd06630 145 IADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA 224 (268)
T ss_pred EcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Confidence 9999998776432111 11223467889999999988899999999999999999999999986544333222222111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. ......+......+.+++.+|++.+|++||++.|+++
T Consensus 225 ~~----------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 SA----------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred cc----------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 10 1111223344578899999999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=310.25 Aligned_cols=259 Identities=26% Similarity=0.370 Sum_probs=207.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||.|+||+||+|....++..||+|++...... ...+.+.+|+++++.++|||++++++.+.+.+..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 3688899999999999999998888999999998543322 24578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|
T Consensus 79 e~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~d 145 (267)
T cd06610 79 PYLSGGSLLDIMKSSYP----------RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIAD 145 (267)
T ss_pred eccCCCcHHHHHHHhcc----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 99999999999975432 13488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCc--eecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||++..+....... ......++..|+|||++... .++.++|+|||||++|||++|+.||.......... +....
T Consensus 146 f~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~---~~~~~ 222 (267)
T cd06610 146 FGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM---LTLQN 222 (267)
T ss_pred cchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHH---HHhcC
Confidence 99998765433221 22334688999999998877 78999999999999999999999987544322111 11111
Q ss_pred cCCchhhhccCCCCc-ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEP-CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+ ..... .....+..+.+++.+||+.||++||++.|+++
T Consensus 223 ~~~-------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 DPP-------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCC-------CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 110 01110 01234577899999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=319.98 Aligned_cols=265 Identities=26% Similarity=0.392 Sum_probs=202.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|.+..+++.||+|++...... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 3678889999999999999999888999999987543322 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.++..... .++|..++.++.|++.|++|||+. +++||||+|+||++++++.++|+|
T Consensus 80 e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~d 143 (286)
T cd07846 80 EFVDHTVLDDLEKYPN-------------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCD 143 (286)
T ss_pred ecCCccHHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEe
Confidence 9999999988765432 378999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc--
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE-- 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-- 927 (1024)
||++....... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||..................
T Consensus 144 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T cd07846 144 FGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLI 221 (286)
T ss_pred eeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCc
Confidence 99998764332 22233567899999998875 45788999999999999999999888654432211111110000
Q ss_pred --------cCCch-hhhccCCCC-----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 --------EKPIT-DALDKGIAE-----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 --------~~~~~-~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..++. ......... ......+..+.+++.+||+.+|++||+++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 222 PRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000 000000000 001123467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=311.31 Aligned_cols=250 Identities=24% Similarity=0.310 Sum_probs=205.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|+..+.||.|+||.||+|.+..++..||+|++.... .......+.+|+++++.++||||+++++++.+....++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45777889999999999999998889999999885432 2344578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++... .+++.....++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 82 e~~~~~~L~~~i~~~--------------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~d 144 (277)
T cd06640 82 EYLGGGSALDLLRAG--------------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLAD 144 (277)
T ss_pred ecCCCCcHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcc
Confidence 999999999998642 367888899999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++....... .......++..|+|||++.+..++.++|+|||||++|||++|..||............
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~--------- 213 (277)
T cd06640 145 FGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI--------- 213 (277)
T ss_pred cccceeccCCc--cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh---------
Confidence 99997664322 1222346788999999999889999999999999999999999998754432211100
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
............+..+.+++.+||+.+|++||++.++++.
T Consensus 214 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 214 -----PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -----hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0111122234456788999999999999999999999763
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=315.12 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=204.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....++..||+|.++... .......+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 36788899999999999999998889999999885432 2334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|..++..... ...+++..+..++.|++.|+.|||+. .+|+||||||+||+++.++.++|+|
T Consensus 79 e~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 79 EYMDAGSLDKLYAGGVA----------TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred eecCCCCHHHHHHhccc----------cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEee
Confidence 99999999999875321 13589999999999999999999963 2899999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCC------CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK------VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
||.+..+... ......+++.|+|||.+.+.. ++.++||||+||++|||++|+.||...............
T Consensus 147 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 147 FGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred cCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 9998765322 122345788999999886543 478999999999999999999999654432222211111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .. .....+.....++.+++.+||+.+|++||++.+++.
T Consensus 223 ~-~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 223 V-DG----------DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred h-hc----------CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1 10 011223335578899999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=308.48 Aligned_cols=240 Identities=21% Similarity=0.325 Sum_probs=187.2
Q ss_pred ceeeecCcEEEEEEEEcCC------------CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 697 NLIGSGGSGQVYRIDINGA------------GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
+.||+|+||.||+|+.... ...||+|.+... .......+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 4689999999999986422 235899987443 2334567899999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|..++.... ..+++..+++++.||+.|++|||+. +|+||||||+||+++.++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~ 142 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS------------DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREG 142 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCC
Confidence 9999999999999999887543 2488999999999999999999998 999999999999998766
Q ss_pred c-------EEEeccccceecccCCCCceecccccCcccCchhhcc-CCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 001706 845 K-------AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHT 915 (1024)
Q Consensus 845 ~-------~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~ 915 (1024)
. ++++|||++..... .....++..|+|||.+. +..++.++|||||||++|||++ |..|+......
T Consensus 143 ~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~ 216 (262)
T cd05077 143 IDGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA 216 (262)
T ss_pred ccCCCCceeEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence 4 89999999865422 12345788899999886 4678999999999999999985 66665443221
Q ss_pred chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 916 SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
... .. .... ... .......+.+++.+||+.||++||++.++++.+
T Consensus 217 ~~~-~~----~~~~-------~~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 217 EKE-RF----YEGQ-------CML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHH-HH----HhcC-------ccC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 111 11 0100 000 111235788999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=315.63 Aligned_cols=249 Identities=25% Similarity=0.315 Sum_probs=203.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|++++++++||||+++++++......++||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 34667788999999999999998889999999885432 2334568999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 82 e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~d 144 (277)
T cd06642 82 EYLGGGSALDLLKP--------------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLAD 144 (277)
T ss_pred EccCCCcHHHHhhc--------------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcc
Confidence 99999999998863 2378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++..+.... .......++..|+|||++.+..++.++|||||||++|||++|+.|+............ ...
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~-- 216 (277)
T cd06642 145 FGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI----PKN-- 216 (277)
T ss_pred ccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh----hcC--
Confidence 99997654321 1122345788999999999999999999999999999999999998654332211111 000
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.........+..+.+++.+||+.+|++||++.|+++
T Consensus 217 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 217 --------SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred --------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011112233467889999999999999999999997
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=326.18 Aligned_cols=256 Identities=23% Similarity=0.293 Sum_probs=195.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|++.+.||+|+||.||+|....+++.||+|+.... ....|+.++++++||||+++++++......++|+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 4689999999999999999999988999999975322 2356899999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+. ++|.+++.... ..+++..+..|+.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 137 e~~~-~~l~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 200 (357)
T PHA03209 137 PHYS-SDLYTYLTKRS------------RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGD 200 (357)
T ss_pred EccC-CcHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEec
Confidence 9995 68888886533 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH-------H
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW-------R 923 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~-------~ 923 (1024)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||+++..++............. .
T Consensus 201 fG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~ 277 (357)
T PHA03209 201 LGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLK 277 (357)
T ss_pred CccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHH
Confidence 9999753221 12234568999999999999999999999999999999999877765443322111110 0
Q ss_pred HhhccC----Cch---------hhhcc--CCCCcc-------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 HYAEEK----PIT---------DALDK--GIAEPC-------YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ~~~~~~----~~~---------~~~~~--~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ... ...+. ....+. ....+....+++.+||+.||++|||+.|+++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 278 IISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000000 000 00000 000000 0011235567999999999999999999885
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=314.08 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=204.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||++.+..+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999998889999999986544434445678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|
T Consensus 81 e~~~~~~L~~~~~~~~-------------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d 144 (290)
T cd05580 81 EYVPGGELFSHLRKSG-------------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITD 144 (290)
T ss_pred ecCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEee
Confidence 9999999999997643 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++...... .....+++.|+|||.+.+..++.++||||||+++|||++|..||...+....... ......
T Consensus 145 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~ 215 (290)
T cd05580 145 FGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK----ILEGKV 215 (290)
T ss_pred CCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCc
Confidence 9999876432 2234688999999999888899999999999999999999999876552221111 111110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVL 973 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl 973 (1024)
..+......+.+++.+||..||++|+ +++|++
T Consensus 216 -----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 216 -----------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -----------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 11112246788999999999999998 555554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=310.57 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=202.0
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh-------hHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-------NQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
+|...+.||+|+||.||+|....+++.||+|.++..... .....+.+.+|+++++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 366778999999999999998888999999987532211 1122457889999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~ 145 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-------------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADG 145 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-------------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCC
Confidence 9999999999999999997643 378889999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCC--CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK--VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
.++++|||+++...............++..|+|||.+.... ++.++||||+|+++||+++|..||...+... ...
T Consensus 146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~ 222 (272)
T cd06629 146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA---AMF 222 (272)
T ss_pred eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH---HHH
Confidence 99999999997653322222223456788999999987655 8899999999999999999999985433211 111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ...... .......+..+.+++.+||..||++||+++|+++
T Consensus 223 ~~~~~~--~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 223 KLGNKR--SAPPIP----PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred Hhhccc--cCCcCC----ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111010 000001 1111223468889999999999999999999886
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=308.35 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=202.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK---LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
+|+..+.||.|+||.||+|... +++.||||.+..... ...+....+.+|+++++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 4778899999999999999864 688999998864321 123334679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|
T Consensus 80 v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l 143 (265)
T cd06631 80 FMEFVPGGSISSILNRFG-------------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKL 143 (265)
T ss_pred EEecCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEe
Confidence 999999999999997543 377889999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCC----CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 849 ADFGLAKMLAKQG----EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 849 ~DFgla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
+|||.+....... .........++..|+|||++.+..++.++||||+|+++|||++|..||...+..........
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~- 222 (265)
T cd06631 144 IDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGA- 222 (265)
T ss_pred ccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhh-
Confidence 9999987653211 11122345688999999999999999999999999999999999999975432221111100
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ....+......+.+++.+||+.+|++||++.|+++
T Consensus 223 --~~~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 --HRGL---------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --ccCC---------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 01112223467899999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=309.46 Aligned_cols=247 Identities=28% Similarity=0.418 Sum_probs=199.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||++.. .++.||+|.++... ..+.+.+|+.++++++|||++++++++... ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 5688899999999999999875 57789999985432 235788999999999999999999998654 479999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 78 e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~D 143 (254)
T cd05083 78 ELMSKGNLVNFLRTRGR-----------ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSD 143 (254)
T ss_pred ECCCCCCHHHHHHhcCc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECC
Confidence 99999999999976432 3478899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.+...... ......+..|+|||.+.+..++.++||||||+++|||++ |+.||............. .
T Consensus 144 fg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~----~-- 212 (254)
T cd05083 144 FGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE----K-- 212 (254)
T ss_pred Cccceecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh----C--
Confidence 9998764321 112334568999999998999999999999999999998 888876554332222111 1
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
+.........+..+.+++.+||+.+|++||+++++++.|++
T Consensus 213 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 213 --------GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --------CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11111122334678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=309.04 Aligned_cols=254 Identities=24% Similarity=0.306 Sum_probs=201.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--Cce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 766 (1024)
.+|+..+.||+|+||.||+|....+++.||||.+..... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 468888999999999999999988899999998854322 1233457889999999999999999999998764 467
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+++++|.+++.... .+++....+++.|++.||+|||+. +++|+||+|+||+++.++.+
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 145 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-------------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNV 145 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCE
Confidence 89999999999999987543 367888899999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCC-ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
+|+|||.++........ .......++..|+|||.+.+..++.++|||||||++|||++|+.||........ .....
T Consensus 146 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~~~ 222 (265)
T cd06652 146 KLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA---IFKIA 222 (265)
T ss_pred EECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH---HHHHh
Confidence 99999998765322111 122334588899999999988999999999999999999999999865422211 11111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. ......+......+.+++.+|+. +|++||+++|+++
T Consensus 223 ~~----------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 223 TQ----------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred cC----------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00 01112233445678889999995 8999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=312.51 Aligned_cols=245 Identities=24% Similarity=0.292 Sum_probs=196.7
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|+||+||+|....+++.||+|.+.............+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999889999999998654322233455678899999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+....
T Consensus 81 ~~~l~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~ 146 (277)
T cd05577 81 KYHIYNVGE-----------PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELK 146 (277)
T ss_pred HHHHHHcCc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence 999976542 2488999999999999999999998 99999999999999999999999999987653
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
.. .......++..|+|||++.+..++.++||||+|+++|||++|+.||...........+......
T Consensus 147 ~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------- 212 (277)
T cd05577 147 GG---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE----------- 212 (277)
T ss_pred cC---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-----------
Confidence 31 1223346788999999999888999999999999999999999999765442222222111110
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
.....+...+..+.+++.+||+.||++||+++|
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 011112223567899999999999999995444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=311.92 Aligned_cols=249 Identities=26% Similarity=0.322 Sum_probs=204.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||.|++|.||+|.+..+++.||+|++.... .......+.+|+++++.++|||++++++++.++...++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 5778889999999999999998899999999985432 23335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++... .+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++++||
T Consensus 80 ~~~~~~L~~~~~~~--------------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (274)
T cd06609 80 YCGGGSCLDLLKPG--------------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADF 142 (274)
T ss_pred eeCCCcHHHHHhhc--------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccc
Confidence 99999999998743 378999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|+++...... .......+++.|+|||++.+..++.++||||||+++|||++|..||...+.......+. ...
T Consensus 143 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~----~~~-- 214 (274)
T cd06609 143 GVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP----KNN-- 214 (274)
T ss_pred ccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh----hcC--
Confidence 9998764321 12234568889999999999899999999999999999999999986544222111111 110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ...+..+.+++.+||..||++||+++++++
T Consensus 215 ----~~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 215 ----PPSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----CCCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000000 013467889999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=307.90 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=205.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|....+++.||||.+..... .....+.+.+|+++++.++|||++++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 47788999999999999999988999999999865432 33446789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-CcEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~D 850 (1024)
|+++++|.+++..... ..+++..+.+++.|++.|++|||++ +++||||+|+||+++.+ +.+|++|
T Consensus 80 ~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d 145 (256)
T cd08220 80 YAPGGTLAEYIQKRCN-----------SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGD 145 (256)
T ss_pred cCCCCCHHHHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcc
Confidence 9999999999976432 3478899999999999999999998 99999999999999865 4689999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||.+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......... ..
T Consensus 146 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~---~~-- 217 (256)
T cd08220 146 FGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS---GT-- 217 (256)
T ss_pred CCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh---cC--
Confidence 99998764322 12234678899999999988899999999999999999999999876554332222211 00
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+.+...+..+.+++..||+.+|++||++.|+++
T Consensus 218 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 218 ---------FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00111223467889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=316.80 Aligned_cols=258 Identities=23% Similarity=0.319 Sum_probs=206.5
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||+|....+++.||+|.+...........+.+.+|+++++.++||||+++++.+.+....++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 67888999999999999999988899999999876544333456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+.+++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+||
T Consensus 82 ~~~~~~L~~~~~~~~~-----------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~df 147 (316)
T cd05574 82 YCPGGELFRLLQRQPG-----------KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDF 147 (316)
T ss_pred ecCCCCHHHHHHhCCC-----------CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeec
Confidence 9999999999875432 3588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCC---------------------------ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh
Q 001706 852 GLAKMLAKQGEP---------------------------HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT 904 (1024)
Q Consensus 852 gla~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t 904 (1024)
|++......... .......||..|+|||++.+..++.++||||||+++|||++
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~ 227 (316)
T cd05574 148 DLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY 227 (316)
T ss_pred chhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh
Confidence 998754322110 01123457889999999999999999999999999999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 905 GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 905 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
|..||.+.+......... ......+.....+..+.+++.+||+.||++||+++..++.+
T Consensus 228 g~~pf~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l 286 (316)
T cd05574 228 GTTPFKGSNRDETFSNIL-------------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI 286 (316)
T ss_pred CCCCCCCCchHHHHHHHh-------------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHH
Confidence 999997655432221111 11111111111457899999999999999999944443333
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=307.77 Aligned_cols=254 Identities=25% Similarity=0.304 Sum_probs=205.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|+||.||+|....+++.+|+|.+..... ...+.+.+|++++++++||||+++++++.+.+..+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 568888999999999999999988889999999864322 24578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 80 e~~~~~~l~~~~~~~~------------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d 144 (262)
T cd06613 80 EYCGGGSLQDIYQVTR------------GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLAD 144 (262)
T ss_pred eCCCCCcHHHHHHhhc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECc
Confidence 9999999999987642 2478899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCC---CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||.+....... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.............. .
T Consensus 145 ~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~---~ 219 (262)
T cd06613 145 FGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK---S 219 (262)
T ss_pred cccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---c
Confidence 99987654321 122335678899999998877 889999999999999999999999876443221111100 0
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.-. ... .......+.++.+++.+||..+|.+||++.+++.
T Consensus 220 ~~~-----~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 220 NFP-----PPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cCC-----Ccc--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 000 0112334567899999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=310.28 Aligned_cols=240 Identities=20% Similarity=0.309 Sum_probs=187.1
Q ss_pred eeeecCcEEEEEEEEcC------------------------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCce
Q 001706 698 LIGSGGSGQVYRIDING------------------------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 753 (1024)
.||+|+||.||+|.... ....||+|++... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 68999999999987532 1235899988432 22345678899999999999999
Q ss_pred eeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCC
Q 001706 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 833 (1024)
Q Consensus 754 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 833 (1024)
+++++++.+....++||||+++|+|..++.... ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dl 143 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK------------GRVPVAWKITVAQQLASALSYLEDK---NLVHGNV 143 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCC
Confidence 999999999999999999999999999987533 2478899999999999999999998 9999999
Q ss_pred CCCCEEECCCC-------cEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHH-h
Q 001706 834 KSSNILLDSEF-------KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELV-T 904 (1024)
Q Consensus 834 k~~Nill~~~~-------~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~-t 904 (1024)
||+||+++.++ .++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +
T Consensus 144 kp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 144 CAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred CcccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 99999997653 3899999988653221 12356788999998865 56899999999999999995 6
Q ss_pred CCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 905 GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 905 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
|..||............ ..... ... .....+.+++.+||+.+|++||+++++++.|.
T Consensus 218 g~~p~~~~~~~~~~~~~----~~~~~--------~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 218 GEVPLKERTPSEKERFY----EKKHR--------LPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred CCCCccccChHHHHHHH----HhccC--------CCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 77777654432221111 11110 111 11246889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=317.71 Aligned_cols=265 Identities=23% Similarity=0.345 Sum_probs=202.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||+++++++.+++..++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 4578889999999999999999988899999999854322 12234677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 83 ~e~~~-~~l~~~l~~~~------------~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 146 (301)
T cd07873 83 FEYLD-KDLKQYLDDCG------------NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLA 146 (301)
T ss_pred Eeccc-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEEC
Confidence 99997 68998887543 2478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||++....... .......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...+.......+.......
T Consensus 147 dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 224 (301)
T cd07873 147 DFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTP 224 (301)
T ss_pred cCcchhccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 999987543221 122334578899999987654 57889999999999999999999997655432222221111000
Q ss_pred C--Cchhhhc---------cCCCCcc----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 K--PITDALD---------KGIAEPC----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~--~~~~~~~---------~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ....... +.....+ ....+..+.+++.+|++.||.+|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 225 TEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 0000000 0000000 1122456789999999999999999999886
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=335.05 Aligned_cols=259 Identities=19% Similarity=0.209 Sum_probs=192.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc------cCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR------HANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~l~~~~~~~ 763 (1024)
.++|++.++||+|+||+||+|.+...++.||||+++... ...+.+..|+++++.++ |++++++++++...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 467999999999999999999998889999999985422 12334556666666664 45689999988764
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEEC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~ 841 (1024)
+.+++|||++ +++|.+++.... .+++..+..|+.||+.||+|||+ . +|+||||||+|||++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHG-------------PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 5688999988 688998887543 38899999999999999999996 5 899999999999998
Q ss_pred CCC----------------cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC
Q 001706 842 SEF----------------KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905 (1024)
Q Consensus 842 ~~~----------------~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg 905 (1024)
.++ .+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 765 49999999875421 123346799999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHhhc-------cC---Cchhhhc------cCCC--------C---cccHHHHHHHHHHHHHc
Q 001706 906 KEANYGDEHTSLAEWAWRHYAE-------EK---PITDALD------KGIA--------E---PCYLEEMTTVYRLALIC 958 (1024)
Q Consensus 906 ~~p~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~------~~~~--------~---~~~~~~~~~l~~li~~c 958 (1024)
+.||.+.+.......+...... .. ...+... .... . .........+.+++.+|
T Consensus 342 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 421 (467)
T PTZ00284 342 KLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGL 421 (467)
T ss_pred CCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHh
Confidence 9999765543322221111000 00 0000000 0000 0 00001135678999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 001706 959 TSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 959 l~~dP~~RPs~~evl~ 974 (1024)
++.||++||+++|+++
T Consensus 422 L~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 422 LHYDRQKRLNARQMTT 437 (467)
T ss_pred CCcChhhCCCHHHHhc
Confidence 9999999999999986
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=306.64 Aligned_cols=254 Identities=25% Similarity=0.313 Sum_probs=199.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+.+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+++++.++||||+++++++..++..++|+
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 34445578999999999999998889999999885432 234567999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-CCcEEEe
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIA 849 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~ 849 (1024)
||+++++|.+++...... ...++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+
T Consensus 85 e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 85 EQVPGGSLSALLRSKWGP----------LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred ecCCCCCHHHHHHHhccc----------CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEe
Confidence 999999999999854220 1127788889999999999999998 9999999999999987 6799999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCC--CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK--VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
|||.+....... .......+++.|+|||++.+.. ++.++||||||+++|||++|+.||..........+......
T Consensus 152 dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~- 228 (268)
T cd06624 152 DFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK- 228 (268)
T ss_pred cchhheecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc-
Confidence 999987653321 1222345789999999987644 78899999999999999999999865432221111110000
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.....+.....++.+++.+||+.+|++||++.|+++
T Consensus 229 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 -----------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -----------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 011122234467889999999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=307.34 Aligned_cols=253 Identities=30% Similarity=0.468 Sum_probs=203.8
Q ss_pred CCccceeeecCcEEEEEEEEcCCC----cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAG----EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
++..+.||.|+||.||++.....+ ..||+|+++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 356788999999999999997655 8899999854432 2246789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
+|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+++
T Consensus 79 i~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l 144 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-----------KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKI 144 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-----------ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEE
Confidence 9999999999999986442 1288999999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
+|||.+.......... .....+++.|+|||.+.+..++.++||||+|+++|||++ |..||.........+... .
T Consensus 145 ~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~----~ 219 (258)
T smart00219 145 SDFGLSRDLYDDDYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK----K 219 (258)
T ss_pred cccCCceecccccccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh----c
Confidence 9999998765432211 112336789999999988899999999999999999999 666665543322222221 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
.. ....+...+.++.+++.+|++.||++||++.|+++.|
T Consensus 220 ~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 220 GY----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CC----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11 0111222456889999999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=307.67 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=201.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.+|+..+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|++++++++|||++++++++.+....++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 46778899999999999999875 467899998854322 1356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|
T Consensus 79 e~~~~~~L~~~~~~~~~------------~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d 143 (256)
T cd05112 79 EFMEHGCLSDYLRAQRG------------KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSD 143 (256)
T ss_pred EcCCCCcHHHHHHhCcc------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECC
Confidence 99999999999875432 378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.+....... ........++.+|+|||.+.+..++.++||||+|+++|||++ |..||.........+.. ....
T Consensus 144 ~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~ 218 (256)
T cd05112 144 FGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI----NAGF 218 (256)
T ss_pred CcceeecccCc-ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH----hCCC
Confidence 99987653321 111222335678999999998999999999999999999998 88887654433222221 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
. ...+...+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 219 ~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 219 R----------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred C----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0 0001112367999999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=324.03 Aligned_cols=260 Identities=23% Similarity=0.309 Sum_probs=199.3
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE----- 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 763 (1024)
+.++|+..+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45689999999999999999999988899999999864322 223345678999999999999999999887543
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~ 153 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC--------------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNE 153 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECC
Confidence 3468999998 7899888753 2388899999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+........
T Consensus 154 ~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 228 (343)
T cd07878 154 DCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRI 228 (343)
T ss_pred CCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 999999999999865322 234568999999999877 56899999999999999999999999765433222222
Q ss_pred HHHhhccCCchhhhc-----------cCCCCcc-------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEKPITDALD-----------KGIAEPC-------YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~-----------~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... +..+... ..+.... .....+.+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 229 MEVVGT--PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHhCC--CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111100 0000000 0000000 0011245789999999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=312.94 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=203.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|++.+.||.|+||.||+|....++..||+|++... .....+.+.+|++++++++||||+++++.+.++...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 35688889999999999999999888999999998543 233456799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.++|+
T Consensus 81 ~e~~~~~~L~~~~~~~~------------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~ 145 (280)
T cd06611 81 IEFCDGGALDSIMLELE------------RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLA 145 (280)
T ss_pred eeccCCCcHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEc
Confidence 99999999999987543 2488999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
|||++...... ........+++.|+|||.+. ...++.++||||||+++|||++|+.||...+...... .
T Consensus 146 d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~----~ 219 (280)
T cd06611 146 DFGVSAKNKST--LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL----K 219 (280)
T ss_pred cCccchhhccc--ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH----H
Confidence 99998754322 11223456889999999875 3456789999999999999999999987654322111 1
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ... ..+...+..+.+++.+||+.+|++||++.++++
T Consensus 220 ~~~~~~------~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 220 ILKSEP------PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HhcCCC------CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 111100 000 111223467889999999999999999999976
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=318.89 Aligned_cols=248 Identities=27% Similarity=0.368 Sum_probs=204.2
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQ 776 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 776 (1024)
-++|+|.||+||.|++.++....|||-+... +.+..+-+.+|+...+.++|.|||+++|++.+.+..-+.||-++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 3689999999999999999999999988432 2344567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-CCcEEEeccccce
Q 001706 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIADFGLAK 855 (1024)
Q Consensus 777 sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DFgla~ 855 (1024)
+|.++++..-+.. .-.+.++-.+..||++||.|||+. .|||||||-+|||++. .|.+||+|||-++
T Consensus 658 SLSsLLrskWGPl----------KDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsK 724 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPL----------KDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSK 724 (1226)
T ss_pred cHHHHHHhccCCC----------ccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccch
Confidence 9999998765421 125677788999999999999999 9999999999999965 6999999999998
Q ss_pred ecccCCCCceecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
.+..- ......+.||..|||||++..+ .|+.++|||||||++.||.||++||.........-+.. .+.+
T Consensus 725 RLAgi--nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-GmyK------ 795 (1226)
T KOG4279|consen 725 RLAGI--NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-GMYK------ 795 (1226)
T ss_pred hhccC--CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-ccee------
Confidence 87432 2233457899999999999876 58899999999999999999999997544322111111 1111
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...+.+.+.+.+...++.+|+..||..||+++++++
T Consensus 796 -----vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 -----VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -----cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 123556777888999999999999999999999985
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=317.32 Aligned_cols=246 Identities=24% Similarity=0.395 Sum_probs=199.2
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc--eEEEEec
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR-KLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS--KLLVYEY 772 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lv~e~ 772 (1024)
..+||+|+|-+||||.+..+|..||--.++... .......++|..|+++++.|+||||+++|.+|.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999998888888755442221 1223445899999999999999999999999987654 7799999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-CcEEEecc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADF 851 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DF 851 (1024)
+..|+|..|.++.++ ++......|++||++||.|||++ +|+|+|||||-+|||++.+ |.|||+|.
T Consensus 125 ~TSGtLr~Y~kk~~~-------------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDL 190 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-------------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDL 190 (632)
T ss_pred ccCCcHHHHHHHhcc-------------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecch
Confidence 999999999998775 78889999999999999999998 8999999999999999986 99999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC-CCCcchHHHHHHHhhccCC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG-DEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~ 930 (1024)
|+|..... ......+|||.|||||... ..|.+..||||||+.++||+|+..||.. .... .+++++..+.+
T Consensus 191 GLAtl~r~----s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A----QIYKKV~SGiK 261 (632)
T KOG0584|consen 191 GLATLLRK----SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA----QIYKKVTSGIK 261 (632)
T ss_pred hHHHHhhc----cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH----HHHHHHHcCCC
Confidence 99987632 1233478999999999877 8999999999999999999999999853 2222 23333333322
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
-... . ... .+++.++|.+|+.. .++||++.|+++
T Consensus 262 P~sl-~-kV~-------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 262 PAAL-S-KVK-------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHh-h-ccC-------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1111 1 111 26788999999999 999999999985
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=310.10 Aligned_cols=242 Identities=19% Similarity=0.323 Sum_probs=189.6
Q ss_pred ceeeecCcEEEEEEEEcCCCc-------EEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 697 NLIGSGGSGQVYRIDINGAGE-------FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+.||+|+||.||+|.....+. .||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999998754433 4888877432 234456788999999999999999999999998999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc----
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK---- 845 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---- 845 (1024)
|||+++|+|.++++.... .+++..++.++.||+.|++|||+. +|+||||||+||+++.++.
T Consensus 78 ~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~ 142 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN------------LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTG 142 (258)
T ss_pred EecCCCCcHHHHHhcCCC------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccC
Confidence 999999999999986542 478899999999999999999998 9999999999999988765
Q ss_pred ----EEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 846 ----AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 846 ----~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
++++|||.+..... .....++..|+|||++.+. .++.++||||||+++|||++|..++...........
T Consensus 143 ~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~ 216 (258)
T cd05078 143 NPPFIKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ 216 (258)
T ss_pred CCceEEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH
Confidence 69999998865422 1234578899999998864 578999999999999999999655443222111111
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
. ..... ..+.....++.+++.+||+.||++||+++++++.|.
T Consensus 217 ~---~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 F---YEDRH------------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred H---HHccc------------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 11100 111122357899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=310.32 Aligned_cols=265 Identities=23% Similarity=0.396 Sum_probs=205.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-----CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
++|+..+.||+|+||.||+|+... ....||+|.+.... .....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 568888999999999999998643 34679999874322 23345789999999999999999999999999899
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++|+|.++++...... .......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~----~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKD----EKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred ceEEEEecCCCcHHHHHHhccccc----ccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCc
Confidence 999999999999999998654210 001123589999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHHH
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 924 (1024)
++++|||++...... .........++..|+|||.+.+..++.++||||||+++|||++ |..||............
T Consensus 156 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~--- 231 (275)
T cd05046 156 VKVSLLSLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL--- 231 (275)
T ss_pred EEEcccccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH---
Confidence 999999998754322 1222233456778999999998889999999999999999999 66677543332222211
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
... .. ........+..+.+++.+||+.+|++||++.|+++.|.+
T Consensus 232 -~~~-~~--------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 -QAG-KL--------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -HcC-Cc--------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 110 00 011112234688999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=315.96 Aligned_cols=204 Identities=25% Similarity=0.385 Sum_probs=162.9
Q ss_pred cceeeecCcEEEEEEEEc--CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCceEEEEe
Q 001706 696 SNLIGSGGSGQVYRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENSKLLVYE 771 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 771 (1024)
.++||+|+||.||+|... .+++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999865 3568899999854321 2457789999999999999999998854 456789999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE----CCCCcEE
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL----DSEFKAK 847 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~k 847 (1024)
|+. ++|.+++....... .......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~----~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07868 81 YAE-HDLWHIIKFHRASK----ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred ccC-CCHHHHHHhccccc----ccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEE
Confidence 996 68888876433211 001123588899999999999999999998 99999999999999 4567899
Q ss_pred EeccccceecccCCCC-ceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 848 IADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
|+|||+|+.+...... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 153 l~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 153 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred EeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999999876432211 123346789999999998774 5899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=309.95 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=202.2
Q ss_pred CCccceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----
Q 001706 693 LTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN----- 764 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 764 (1024)
|+..+.||+|+||.||+|... .+++.||||++..... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 556788999999999999864 3568899999865432 2334577899999999999999999999875532
Q ss_pred -ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 765 -SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 765 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
..++++||+++|+|.+++...... .....+++...++++.|++.|++|||+. +|+||||||+||+++.+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~ 149 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIG-------EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNEN 149 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhccc-------CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCC
Confidence 247899999999999988643210 0012478889999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 922 (1024)
+.+|++|||.++...............+++.|++||.+....++.++||||||+++|||++ |..||.+.+......+..
T Consensus 150 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 229 (273)
T cd05074 150 MTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI 229 (273)
T ss_pred CCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999986643322222223345678999999999999999999999999999999 677776544333222221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
. .... ..+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 230 ~----~~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 K----GNRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred c----CCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 1100 01122346899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=313.47 Aligned_cols=265 Identities=23% Similarity=0.354 Sum_probs=203.3
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh--hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+|+..+.||+|+||.||+|....+++.||||.+...... .......+..|++++++++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 367788999999999999999888999999998654322 123346678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+ +++|.+++.... ..+++..++.++.||++||+|||+. +|+||||+|+||+++.++.++|+
T Consensus 81 ~e~~-~~~L~~~i~~~~------------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~ 144 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS------------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLA 144 (298)
T ss_pred Eccc-CCCHHHHHhccC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEc
Confidence 9999 899999997543 1488999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||+++....... ......+++.|+|||.+.+ ..++.++|||||||++|||++|..+|.+.................
T Consensus 145 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~ 222 (298)
T cd07841 145 DFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTP 222 (298)
T ss_pred cceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCC
Confidence 9999987644321 2223456788999998865 467889999999999999999977776554333222221111000
Q ss_pred --------CCchhhhccCCCCc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 --------KPITDALDKGIAEP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 --------~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.............. ........+.+++.+||+.||++||+++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 223 TEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred chhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000000000000 11223467889999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=302.49 Aligned_cols=274 Identities=23% Similarity=0.331 Sum_probs=227.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 768 (1024)
..+|.-..+||+|+||.|-.|..+++.+.||||+++++....+...+--+.|-++++.. +-|.++.+..+|+..++.|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 45788889999999999999999999999999999887766555566667788888876 67899999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+.||+|--++++.++ +.+..+..+|..||-||-+||++ ||++||||.+|||+|.+|++||
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk-------------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi 491 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK-------------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKI 491 (683)
T ss_pred EEEEecCchhhhHHHHhcc-------------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEe
Confidence 9999999999999987665 67778888999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||+++--.- ...+.....|||.|+|||++...+|+.+.|.|||||+||||+.|+.||.++++.++.+.+.....
T Consensus 492 ~DFGmcKEni~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-- 567 (683)
T KOG0696|consen 492 ADFGMCKENIF--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-- 567 (683)
T ss_pred eeccccccccc--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC--
Confidence 99999874221 23344568899999999999999999999999999999999999999999988777666544321
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCccccccc
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFG 1008 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1024)
.++...+.+..++....+.+.|.+|.. .+.....++++||||. -++|.
T Consensus 568 -------------syPKslSkEAv~ickg~ltK~P~kRLG-----------------cg~~ge~di~~H~FFR--~iDWe 615 (683)
T KOG0696|consen 568 -------------SYPKSLSKEAVAICKGLLTKHPGKRLG-----------------CGPEGERDIREHPFFR--RIDWE 615 (683)
T ss_pred -------------cCcccccHHHHHHHHHHhhcCCccccC-----------------CCCccccchhhCcchh--hccHH
Confidence 233344466777778888888887742 1234557899999999 78888
Q ss_pred cccccch
Q 001706 1009 FKRSKKV 1015 (1024)
Q Consensus 1009 ~~~~~~~ 1015 (1024)
+.+.++-
T Consensus 616 k~E~~ei 622 (683)
T KOG0696|consen 616 KLERREI 622 (683)
T ss_pred HHhhccC
Confidence 7666543
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=315.00 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=201.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|.....||+|+||.||++....++..||||.+.... ....+.+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 3444567999999999999998889999999884322 3345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+||
T Consensus 100 ~~~~~~L~~~~~~~--------------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~df 162 (292)
T cd06658 100 FLEGGALTDIVTHT--------------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDF 162 (292)
T ss_pred CCCCCcHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccC
Confidence 99999999988532 378889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|++....... .......++..|+|||.+.+..++.++||||||+++|||++|+.||...........+...
T Consensus 163 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~------- 233 (292)
T cd06658 163 GFCAQVSKEV--PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN------- 233 (292)
T ss_pred cchhhccccc--ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------
Confidence 9987653221 1223356889999999999889999999999999999999999998765432221111110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
...... ........+.+++.+||..||++||++.|+++.
T Consensus 234 ---~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 234 ---LPPRVK--DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---CCCccc--cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001111 011233578889999999999999999999963
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=308.41 Aligned_cols=251 Identities=22% Similarity=0.294 Sum_probs=206.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||.|+||.||+|.+..++..||+|++...........+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 47788999999999999999988899999999965544344556789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~ 144 (258)
T cd05578 81 LLLGGDLRYHLSQKV-------------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDF 144 (258)
T ss_pred CCCCCCHHHHHHhcC-------------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeec
Confidence 999999999997542 378899999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+....... ......++..|+|||.+.+..++.++|+||+|+++|+|++|..||....... ..+........
T Consensus 145 ~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~--- 217 (258)
T cd05578 145 NIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-RDQIRAKQETA--- 217 (258)
T ss_pred ccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-HHHHHHHhccc---
Confidence 9987654322 2234567889999999998889999999999999999999999997665431 12221111110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM--KEVL 973 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 973 (1024)
....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 218 --------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 --------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111222334788999999999999999999 5543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.48 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=204.9
Q ss_pred CCCccceeeecCcEEEEEEEEcC-CCcEEEEEEeccch-------hhhHHHHHHHHHHHHHHhc-cccCceeeEEEEEec
Q 001706 692 SLTESNLIGSGGSGQVYRIDING-AGEFVAVKRIWNNR-------KLNQKLEKEFIAEIEILGT-IRHANIVKLWCCISS 762 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~ 762 (1024)
.|+..+.||+|+||.||+|.... .++.+|+|.+.... ........++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37778899999999999999877 67899999875322 1223345678889998875 699999999999999
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEEC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~ 841 (1024)
.+..++||||+++++|.+++..... ....+++..+++++.|++.|+.|||+ . +++||||+|+||+++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~ 148 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKE---------KKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLG 148 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEEC
Confidence 9999999999999999999864321 02358889999999999999999996 5 899999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.++.++|+|||.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...+........
T Consensus 149 ~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~ 225 (269)
T cd08528 149 EDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKI 225 (269)
T ss_pred CCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHH
Confidence 99999999999998754332 334456889999999999989999999999999999999999998655433222211
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
.. .. . ........+..+.+++.+||+.||++||++.|+..+++
T Consensus 226 ~~----~~-~--------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VE----AV-Y--------EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hh----cc-C--------CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11 00 0 00001122367889999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=313.33 Aligned_cols=252 Identities=28% Similarity=0.387 Sum_probs=203.3
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
..+.|+..+.||+|+||.||+|....+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 34568888999999999999999988899999999865444444555789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||++ |++.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|
T Consensus 93 v~e~~~-g~l~~~~~~~~------------~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL 156 (307)
T cd06607 93 VMEYCL-GSASDILEVHK------------KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKL 156 (307)
T ss_pred EHHhhC-CCHHHHHHHcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEE
Confidence 999997 67777765432 2488999999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
+|||++...... ....+++.|+|||++. ...++.++||||||+++|||++|..||...+........
T Consensus 157 ~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~---- 226 (307)
T cd06607 157 ADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---- 226 (307)
T ss_pred eecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH----
Confidence 999998764321 2346788999999874 456889999999999999999999998765432221111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.... .........+..+.+++.+||+.||++||++.+++..
T Consensus 227 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 227 AQND---------SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hcCC---------CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0011122345678999999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=307.03 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=189.6
Q ss_pred eeeecCcEEEEEEEEcCC--CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 698 LIGSGGSGQVYRIDINGA--GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
.||+|+||.||+|..... ...+++|.+.... .....+.+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 589999999999975432 3356777664332 233457899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.++++..... ....++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 80 ~~L~~~l~~~~~~---------~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 80 GDLKSYLSQEQWH---------RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred CcHHHHHHhhhcc---------cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEeccccccc
Confidence 9999999864321 12356677889999999999999998 99999999999999999999999999986
Q ss_pred ecccCCCCceecccccCcccCchhhccC-------CCCCCCCcchhHHHHHHHHHhCC-CCCCCCCCcchHHHHHHHhhc
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYT-------TKVNEKIDIYSFGVVLLELVTGK-EANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslGvil~el~tg~-~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
...............++..|+|||++.. ..++.++|||||||++|||++++ .||...........+.. +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~---~ 224 (268)
T cd05086 148 SRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIK---D 224 (268)
T ss_pred ccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---h
Confidence 4322211122234567889999998753 24578999999999999999865 45544333222222111 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
. .....++.+.. .....+.+++..|| .+|++||+++|+++.|.
T Consensus 225 -~-~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 225 -Q-QVKLFKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -c-ccccCCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1 11111222221 13357788999999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=310.60 Aligned_cols=257 Identities=23% Similarity=0.290 Sum_probs=200.2
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEe-----c
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS-----S 762 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-----~ 762 (1024)
..++|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4678999999999999999999998889999999875322 1235678899999999 6999999999874 3
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
++..++||||+++++|.+++..... ....+++..+..++.|+++|+.|||+. +++||||||+||+++.
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~ 159 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLK---------RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT 159 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhc---------cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC
Confidence 4568999999999999998864321 123578889999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++.++++|||+++.+.... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||........
T Consensus 160 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred CCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 9999999999998663321 12233468999999998753 4578899999999999999999999875433211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.. ...... .... ..+......+.+++.+||+.||++||++.|+++.
T Consensus 238 ~~----~~~~~~------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LF----KIPRNP------PPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred Hh----hccccC------CCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 10 000000 0000 0111123578899999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=314.79 Aligned_cols=264 Identities=23% Similarity=0.332 Sum_probs=199.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|.+..+|+.||+|+++.... .......+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 37778899999999999999998999999999864322 22234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++ ++|.+++.... ..+++..++.++.||++||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 80 ~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~df 143 (284)
T cd07839 80 YCD-QDLKKYFDSCN------------GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADF 143 (284)
T ss_pred cCC-CCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECcc
Confidence 997 58888876432 2488999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCc-chHHHHHHHh----
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHT-SLAEWAWRHY---- 925 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~-~~~~~~~~~~---- 925 (1024)
|+++.+.... .......++..|+|||.+.+. .++.++||||+||++|||++|+.|+...... .......+..
T Consensus 144 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07839 144 GLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 221 (284)
T ss_pred chhhccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 9997653221 122334578899999988765 4689999999999999999999997644322 1111111110
Q ss_pred -------hccCCchhhhc--cCCC-CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 -------AEEKPITDALD--KGIA-EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 -------~~~~~~~~~~~--~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........... .... .......+.++.+++.+||+.||.+|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 222 EESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000000 0000 0011123467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=307.42 Aligned_cols=260 Identities=25% Similarity=0.352 Sum_probs=202.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv 769 (1024)
+|...+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|++++++++||||+++++++.+ .+..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 57778999999999999999988899999999864322 2445779999999999999999999998865 3468999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+
T Consensus 80 ~e~~~~~~L~~~l~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~ 147 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKK---------RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLC 147 (287)
T ss_pred EEecCCCCHHHHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEe
Confidence 999999999998764321 123478889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC--cchHHHHHHHhhc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH--TSLAEWAWRHYAE 927 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~ 927 (1024)
|||++....... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ....+.. ....
T Consensus 148 dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~- 221 (287)
T cd06621 148 DFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL-SYIV- 221 (287)
T ss_pred eccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH-HHHh-
Confidence 999987543221 1234578899999999999999999999999999999999999876532 1111111 1111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........+. .......+..+.+++.+||+.+|++||++.|+++
T Consensus 222 ~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 222 NMPNPELKDE---PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCCchhhccC---CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1111111000 0111123467899999999999999999999886
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.01 Aligned_cols=239 Identities=21% Similarity=0.356 Sum_probs=189.8
Q ss_pred ceeeecCcEEEEEEEEcCCC----------cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 697 NLIGSGGSGQVYRIDINGAG----------EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
+.||+|+||.||+|.+...+ ..|++|.+..... . ...+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---D-SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---h-HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999997665 3578887643321 1 5788999999999999999999999887 778
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC--
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-- 844 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-- 844 (1024)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~ 140 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN------------NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLN 140 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc------------CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccc
Confidence 999999999999999986442 478899999999999999999998 999999999999999887
Q ss_pred -----cEEEeccccceecccCCCCceecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhC-CCCCCCCCCcc
Q 001706 845 -----KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTG-KEANYGDEHTS 916 (1024)
Q Consensus 845 -----~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg-~~p~~~~~~~~ 916 (1024)
.+|++|||++..... .....++..|+|||++.+. .++.++||||||+++|||++| ..|+.......
T Consensus 141 ~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~ 214 (259)
T cd05037 141 EGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE 214 (259)
T ss_pred cCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence 799999999876532 1223466789999998876 789999999999999999995 55554433221
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 917 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
...+ +..... ... .....+.+++.+||..+|++||++.|+++.|.
T Consensus 215 ~~~~----~~~~~~--------~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 215 KERF----YQDQHR--------LPM----PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHH----HhcCCC--------CCC----CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111 110000 000 11168889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.95 Aligned_cols=245 Identities=24% Similarity=0.260 Sum_probs=190.4
Q ss_pred eeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhc---cccCceeeEEEEEecCCceEEEEeccC
Q 001706 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT---IRHANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~---l~hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
.||+|+||.||++....+++.||+|.+.............+.+|..+++. .+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999988899999998865432222223334455544443 479999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
+++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++
T Consensus 81 ~~~L~~~i~~~~-------------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~ 144 (279)
T cd05633 81 GGDLHYHLSQHG-------------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA 144 (279)
T ss_pred CCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcc
Confidence 999999987543 389999999999999999999998 9999999999999999999999999998
Q ss_pred eecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 855 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
...... ......|+..|+|||.+.+ ..++.++||||+||++|||++|..||.......... .......
T Consensus 145 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~------ 213 (279)
T cd05633 145 CDFSKK----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT------ 213 (279)
T ss_pred eecccc----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhc------
Confidence 765322 1123468999999998864 568999999999999999999999997654333221 1111100
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
.....+...+.++.+++.+||+.||++|| +++|+++
T Consensus 214 -----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 214 -----VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred -----CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 01112223446888999999999999999 5776655
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=312.02 Aligned_cols=265 Identities=26% Similarity=0.356 Sum_probs=205.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|.+..++..||||++..... .....+.+.+|+.++++++|||++++++++.++...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 47788999999999999999988899999999865432 23345679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+ +++|.+++.... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.++++||
T Consensus 80 ~~-~~~L~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~df 143 (286)
T cd07832 80 YM-PSDLSEVLRDEE------------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADF 143 (286)
T ss_pred cc-CCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeee
Confidence 99 999999987543 2488999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
|.+........ .......++..|+|||.+.+. .++.++||||+|+++|||++|..+|.+...................
T Consensus 144 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07832 144 GLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNE 222 (286)
T ss_pred eecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCCh
Confidence 99987643321 122345688999999988654 4689999999999999999997777655443333332222111100
Q ss_pred --------chhh---hccCCC----CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 --------ITDA---LDKGIA----EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 --------~~~~---~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+. ...... .....+....+.+++.+|++.+|++||++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 223 ETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 000000 0001123478899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=304.62 Aligned_cols=255 Identities=29% Similarity=0.405 Sum_probs=204.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|....+++.||+|.++..... ....+.+.+|+++++.++|+||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 477889999999999999999888999999998654332 3456889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+||
T Consensus 80 ~~~~~~L~~~~~~~~-------------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~ 143 (264)
T cd06626 80 YCSGGTLEELLEHGR-------------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDF 143 (264)
T ss_pred cCCCCcHHHHHhhcC-------------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccc
Confidence 999999999997543 377889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCce--ecccccCcccCchhhccCCC---CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 852 GLAKMLAKQGEPHT--MSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 852 gla~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|++........... .....+++.|+|||++.+.. ++.++||||||+++||+++|+.||...+...... .....
T Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~--~~~~~ 221 (264)
T cd06626 144 GCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM--FHVGA 221 (264)
T ss_pred ccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH--HHHhc
Confidence 99987644322111 12346788999999988776 8899999999999999999999997543221111 11000
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... ..+ +........+.+++.+||+.+|++||++.|++.
T Consensus 222 ~~~-------~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 GHK-------PPI--PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCC-------CCC--CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 000 111122467789999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=304.42 Aligned_cols=251 Identities=28% Similarity=0.369 Sum_probs=203.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+|+..+.||+|++|.||+|....+++.||+|.+..... ..++..+.+.+|+++++.++||||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 36777899999999999999988899999998854321 1234457899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+
T Consensus 81 ~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~ 144 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-------------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLA 144 (258)
T ss_pred EEecCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEc
Confidence 99999999999997533 378899999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCC-CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||.+....... ......++..|+|||.+.... ++.++|+||||+++|||++|+.||...... .........
T Consensus 145 d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~- 217 (258)
T cd06632 145 DFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV---AAVFKIGRS- 217 (258)
T ss_pred cCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH---HHHHHHHhc-
Confidence 999987653322 223456889999999987776 899999999999999999999998654421 111111110
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... ...+......+.+++.+||+.+|++||++.+++.
T Consensus 218 ~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 218 KEL---------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ccC---------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000 0111223467889999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=306.32 Aligned_cols=240 Identities=25% Similarity=0.283 Sum_probs=197.1
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||.|++|.||+|....+++.||+|++...........+.+.+|+++++.++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999888999999998655444445567899999999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 81 ~~~l~~~~-------------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~ 144 (262)
T cd05572 81 WTILRDRG-------------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLK 144 (262)
T ss_pred HHHHhhcC-------------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccC
Confidence 99997643 378889999999999999999998 99999999999999999999999999998764
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
... ......++..|+|||.+.+..++.++|+||+|+++|||++|..||...+... .......... .
T Consensus 145 ~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~----------~ 210 (262)
T cd05572 145 SGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEIYNDILKG----------N 210 (262)
T ss_pred ccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHHHHHHhcc----------C
Confidence 322 2223467889999999988889999999999999999999999997655311 1111111100 0
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCC
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPS 968 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 968 (1024)
.....+......+.+++.+||+.+|++||+
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLG 240 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcC
Confidence 011122222578999999999999999999
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=314.21 Aligned_cols=204 Identities=25% Similarity=0.392 Sum_probs=162.4
Q ss_pred cceeeecCcEEEEEEEEcC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCceEEEEe
Q 001706 696 SNLIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENSKLLVYE 771 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 771 (1024)
..+||+|+||.||+|.... ++..||+|.+..... ...+.+|+++++.++||||+++++++.. ....++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 3689999999999998753 557899998854321 2457889999999999999999998854 557899999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE----CCCCcEE
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL----DSEFKAK 847 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~k 847 (1024)
|++ ++|.+++....... .......+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~----~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07867 81 YAE-HDLWHIIKFHRASK----ANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred eeC-CcHHHHHHhhhccc----cCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEE
Confidence 987 57888876432210 011123588899999999999999999998 99999999999999 4567899
Q ss_pred EeccccceecccCCCC-ceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 848 IADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
|+|||+++.+...... .......+|+.|+|||++.+. .++.++||||+||++|||+||..||...
T Consensus 153 l~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 153 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred EeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999999876433221 122345689999999998764 5789999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=305.84 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=206.0
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec--CCceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--ENSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv 769 (1024)
+|+..+.||.|+||.||+|.+..+++.||+|++..... .....+.+.+|+++++.++||||+++++++.. ....+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 47778899999999999999988899999998854322 34445778999999999999999999997754 4567999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhcccc-----ccCCCceEeCCCCCCCEEECCCC
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH-----HDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
|||+++++|.+++..... ....+++..++.++.|++.|++||| +. +++||||+|+||+++.++
T Consensus 80 ~e~~~~~~L~~~l~~~~~---------~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~ 147 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKK---------ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANN 147 (265)
T ss_pred ehhccCCCHHHHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCC
Confidence 999999999999975422 1235889999999999999999999 66 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
.+|++|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.....+.+
T Consensus 148 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--- 222 (265)
T cd08217 148 NVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI--- 222 (265)
T ss_pred CEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH---
Confidence 999999999987643321 123356899999999999989999999999999999999999999765532222211
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. +.....+...+..+.+++.+|++.+|++||++.+|++
T Consensus 223 -~~----------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 223 -KE----------GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -hc----------CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11 1111222344578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=305.46 Aligned_cols=250 Identities=24% Similarity=0.321 Sum_probs=203.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
+-|+..+.||+|+||.||+|....+++.||||...... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 34777889999999999999998889999999874332 2234568999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+++++|.+++... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 82 e~~~~~~l~~~i~~~--------------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~d 144 (277)
T cd06641 82 EYLGGGSALDLLEPG--------------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLAD 144 (277)
T ss_pred EeCCCCcHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEee
Confidence 999999999998632 378999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||++..+.... .......++..|+|||.+.+..++.++|+|||||++|||++|..||........... .....
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~- 217 (277)
T cd06641 145 FGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL----IPKNN- 217 (277)
T ss_pred cccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH----HhcCC-
Confidence 99987654321 112234678899999999988899999999999999999999999865432221111 11110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
........+..+.+++.+||+.+|++||++.++++.
T Consensus 218 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 ---------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---------CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011112234678899999999999999999999973
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=311.24 Aligned_cols=266 Identities=24% Similarity=0.315 Sum_probs=203.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKL 767 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 767 (1024)
.++|+..+.||+|+||.||+|....+++.||+|.++..... ......+.+|+.++++++||||+++++++... ...+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 45788899999999999999999888999999998654322 23345678899999999999999999998777 8899
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+||||++ ++|.+++.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++
T Consensus 83 lv~e~~~-~~L~~~~~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~ 146 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK------------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILK 146 (293)
T ss_pred EEehhcC-cCHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEE
Confidence 9999997 59999887543 2488999999999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|+|||++..+.... .......+++.|+|||.+.+. .++.++|+||+|+++|||++|..||...........+.....
T Consensus 147 l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~ 224 (293)
T cd07843 147 ICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLG 224 (293)
T ss_pred EeecCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 99999998764432 122334578899999988765 468999999999999999999999876543332222211110
Q ss_pred -----------ccC-----CchhhhccCCCCcccHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 -----------EEK-----PITDALDKGIAEPCYLE-EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 -----------~~~-----~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... .........+....+.. ....+.+++.+||+.||++||++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 225 TPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00000000001111111 2467889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=311.34 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=204.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|.+..+++.||||+++... ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 5788899999999999999998889999999885432 223345789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++++.+..+.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+||
T Consensus 81 ~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 144 (288)
T cd07833 81 YVERTLLELLEASP-------------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDF 144 (288)
T ss_pred cCCCCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEee
Confidence 99987776655432 2378899999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc---
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE--- 927 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 927 (1024)
|.+........ .......++..|+|||++.+. .++.++||||||+++|||++|+.||.+....+...........
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07833 145 GFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPP 223 (288)
T ss_pred ecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99987644322 122345678899999999888 8899999999999999999999988755432211111110000
Q ss_pred --------cCCchh--hhccC----CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 --------EKPITD--ALDKG----IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 --------~~~~~~--~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...... ..... .....+...+.++.+++.+||+.+|++||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 00000 000011122578999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=309.25 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=201.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 769 (1024)
..|++.+.||+||.+.||++...+ .+.||+|++... ..+......|..|+..|.+++ |.+||++++|-..++..|+|
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 468899999999999999998764 456777766433 335666789999999999995 99999999999889999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||=+ .+|..+|++.... ..+| .++.+..|++.|+.+.|.+ ||||.||||.|+++- .|.+||+
T Consensus 439 mE~Gd-~DL~kiL~k~~~~-----------~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLI 501 (677)
T KOG0596|consen 439 MECGD-IDLNKILKKKKSI-----------DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLI 501 (677)
T ss_pred eeccc-ccHHHHHHhccCC-----------CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEee
Confidence 99874 8999999987652 2345 7888999999999999999 999999999999984 5699999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC-----------CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchH
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----------KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~ 918 (1024)
|||.|..+..+.........+||+.||+||.+... ++++++||||+|||||+|+.|+.||..-.
T Consensus 502 DFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----- 576 (677)
T KOG0596|consen 502 DFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----- 576 (677)
T ss_pred eechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----
Confidence 99999998877777777788999999999987643 35678999999999999999999985321
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLE-EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+.. +..+.+++-..+++.- ...++.++|+.|+..||++||+..|+++
T Consensus 577 -n~~aK------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 577 -NQIAK------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -HHHHH------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11221 1222222221111111 1123899999999999999999999986
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=302.02 Aligned_cols=252 Identities=29% Similarity=0.439 Sum_probs=207.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||+|....+++.||||++..... ....+.+.+|++++++++|||++++++++...+..++|||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 57788999999999999999998899999999865432 1446789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|+++++|.+++.... .+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~d 143 (264)
T cd06623 80 YMDGGSLADLLKKVG-------------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIAD 143 (264)
T ss_pred ecCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 999999999997542 37889999999999999999999 8 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||.+......... .....++..|+|||.+.+..++.++|+||||+++|||++|..||.........+.. .......
T Consensus 144 f~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~-~~~~~~~- 219 (264)
T cd06623 144 FGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM-QAICDGP- 219 (264)
T ss_pred CccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH-HHHhcCC-
Confidence 9999876432221 12346788999999999999999999999999999999999998765432222211 1111110
Q ss_pred chhhhccCCCCcccHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLE-EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
....+.. .+..+.+++.+||+.+|++||++.|+++
T Consensus 220 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 220 ---------PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred ---------CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0111112 4468899999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=337.48 Aligned_cols=268 Identities=26% Similarity=0.390 Sum_probs=213.0
Q ss_pred CCccceeeecCcEEEEEEEEcC-------CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCC
Q 001706 693 LTESNLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSEN 764 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 764 (1024)
....+.+|+|.||.|++|.... ....||||.++..... ...+.+..|+++|+.+ +||||+.++|+|...+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 3455699999999999987531 1457999998765543 5568999999999999 6999999999999999
Q ss_pred ceEEEEeccCCCCHHHHhccCc-cccccCCCCccc--ccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRK-RSLVSGSSSVHQ--HVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
..++|+||++.|+|.+|++..+ ............ ..+...+.+.++.|||.||+||++. ++|||||.++|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 9999999999999999999877 111111100111 2488899999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCCceecccc--cCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCC--Ccch
Q 001706 842 SEFKAKIADFGLAKMLAKQGEPHTMSAVA--GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE--HTSL 917 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~--~~~~ 917 (1024)
++..+||+|||+|+...+.+.... .... -...|||||.+....|+.++|||||||+||||+|.+.+++.+- ..++
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l 531 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL 531 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH
Confidence 999999999999997655433322 2222 3456999999999999999999999999999999665554431 1111
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.+.+..+.+...+..+..+++++|+.||+.+|++||+++|+++.++...
T Consensus 532 --------------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 532 --------------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred --------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1223344455566677899999999999999999999999999999864
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=305.60 Aligned_cols=251 Identities=29% Similarity=0.406 Sum_probs=204.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|++++++++||||+++++++......++|+|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 57778899999999999999998899999999865432 3456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|+++++|.+++.... ..+++..+.+++.|++.|++|||+ . +++||||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d 144 (265)
T cd06605 80 YMDGGSLDKILKEVQ------------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCD 144 (265)
T ss_pred ecCCCcHHHHHHHcc------------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEee
Confidence 999999999998643 247888999999999999999998 7 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCC--cchHHHHHHHhhcc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH--TSLAEWAWRHYAEE 928 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~ 928 (1024)
||.+........ ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||...+. ....+.........
T Consensus 145 ~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd06605 145 FGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP 220 (265)
T ss_pred cccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC
Confidence 999876532211 115688899999999999999999999999999999999999865421 11111111111110
Q ss_pred CCchhhhccCCCCcccHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLE-EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ...+.. .+..+.+++..||..||++||++.|++.
T Consensus 221 ~-----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 P-----------PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred C-----------CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0 011111 4567899999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=316.94 Aligned_cols=250 Identities=23% Similarity=0.309 Sum_probs=204.6
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|.++-.+|.|+||.||+|..+.++-..|-|++. .......++|.-|++|++.++||+||++++.|.-++..+++.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIe---tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIE---TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhc---ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 456667899999999999998777778888873 22345578899999999999999999999998888999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
|.||..+..+-.-.+ ++...++.-+++|++.||.|||++ .|+|||||+.|||++-+|.++++|||
T Consensus 111 C~GGAVDaimlEL~r------------~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGR------------VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred cCCchHhHHHHHhcc------------ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccc
Confidence 999999998877653 588999999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
.+..... .......++|||+|||||+.+ ..+|+.++||||||++|.||..+.+|...-.+-.+ +......
T Consensus 176 VSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV---llKiaKS 250 (1187)
T KOG0579|consen 176 VSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIAKS 250 (1187)
T ss_pred ccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH---HHHHhhc
Confidence 8855322 223345688999999999765 56899999999999999999999988765433211 1111111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+. +.+ -.+......+.+++.+|+.+||..||+++++++
T Consensus 251 eP-------PTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 251 EP-------PTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CC-------Ccc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11 111 235666788999999999999999999999874
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=312.30 Aligned_cols=248 Identities=23% Similarity=0.376 Sum_probs=200.1
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|.....||+|+||.||+|....+++.||+|++.... ....+.+.+|+.+++.++|||++++++++..++..++|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 334457999999999999998889999999985422 22346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++.. ..+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 100 ~~~~~L~~~~~~--------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 100 LQGGALTDIVSQ--------------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred CCCCCHHHHHhh--------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeech
Confidence 999999998753 2378899999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
++..+.... .......++..|+|||++.+..++.++|||||||++|||++|..||............ .......
T Consensus 163 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~ 236 (297)
T cd06659 163 FCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL----RDSPPPK 236 (297)
T ss_pred hHhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hccCCCC
Confidence 987553321 1223456889999999999989999999999999999999999999765433222111 1111000
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .........+.+++.+||+.+|++||++.|+++
T Consensus 237 ------~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 237 ------L--KNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred ------c--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0 001122356889999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=308.06 Aligned_cols=252 Identities=22% Similarity=0.298 Sum_probs=198.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec------
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS------ 762 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------ 762 (1024)
...|+..+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +||||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 457888899999999999999998889999999884432 2345688899999998 69999999998853
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
....++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~ 156 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKG-----------NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTE 156 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 4568999999999999999975442 3477888999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++.++|+|||++....... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||........
T Consensus 157 ~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~ 234 (282)
T cd06636 157 NAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA 234 (282)
T ss_pred CCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence 9999999999987553211 1223356889999999875 34678899999999999999999999865432211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ... ... .......+..+.+++.+||+.||.+||++.|+++
T Consensus 235 ~~~~----~~~------~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 LFLI----PRN------PPP---KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhhH----hhC------CCC---CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1100 000 000 0111223467999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=310.10 Aligned_cols=255 Identities=28% Similarity=0.379 Sum_probs=204.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|+..+.||+|+||.||+|....++..||+|++.............+.+|+++++.++|||++++++++.+....++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34777889999999999999998889999999986543334455578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||++ |++.+++.... ..++|..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|
T Consensus 105 e~~~-g~l~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~d 168 (317)
T cd06635 105 EYCL-GSASDLLEVHK------------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLAD 168 (317)
T ss_pred eCCC-CCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEec
Confidence 9997 57877775433 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||++..... .....+++.|+|||++. .+.++.++|||||||++|||++|+.||...+.......... .
T Consensus 169 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~---~ 239 (317)
T cd06635 169 FGSASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ---N 239 (317)
T ss_pred CCCccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---c
Confidence 999865432 12346788999999874 45789999999999999999999999876543222111111 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
.. ........+..+.+++.+||+.+|++||++.++++......
T Consensus 240 ~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 240 ES----------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred cC----------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 10 11112233467889999999999999999999998665544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=305.72 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=200.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc---cCceeeEEEEEecCCceEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR---HANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~l 768 (1024)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|++++++++ |||++++++++.+....++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4677889999999999999998889999999885432 2233467889999999996 9999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
||||+++++|.+++... .+++...+.++.|++.|++|||+. +|+||||+|+||+++.++.+++
T Consensus 80 v~e~~~~~~L~~~~~~~--------------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l 142 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG--------------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKL 142 (277)
T ss_pred EEecCCCCcHHHHHHcc--------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEE
Confidence 99999999999998642 378999999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
+|||++..+.... .......|+..|+|||.+.++ .++.++|||||||++|||++|..||............ ..
T Consensus 143 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~----~~ 216 (277)
T cd06917 143 CDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI----PK 216 (277)
T ss_pred ccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc----cc
Confidence 9999998765432 222334688999999988754 4689999999999999999999998754332211100 00
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ....+.. ...+.++.+++.+||+.||++||++.|+++
T Consensus 217 -~-----~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 217 -S-----KPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -C-----CCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0 0011111 113467899999999999999999999976
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=305.65 Aligned_cols=249 Identities=22% Similarity=0.365 Sum_probs=201.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|...+.||+|++|.||++....+++.||+|++... .....+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 455567999999999999998888999999987432 22334668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++||
T Consensus 97 ~~~~~~L~~~~~~~--------------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~ 159 (285)
T cd06648 97 FLEGGALTDIVTHT--------------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDF 159 (285)
T ss_pred ccCCCCHHHHHHhC--------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEccc
Confidence 99999999998752 378889999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+...... ........|++.|+|||.+.+..++.++|||||||++|||++|+.||...+........ .....
T Consensus 160 g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~----~~~~~- 232 (285)
T cd06648 160 GFCAQVSKE--VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI----RDNLP- 232 (285)
T ss_pred ccchhhccC--CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH----HhcCC-
Confidence 988754332 11223356889999999999889999999999999999999999998765433222211 11110
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... .....+..+.+++.+||+.+|++||++.++++
T Consensus 233 -----~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 233 -----PKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -----CCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000 01113467899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=308.98 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=204.0
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|...+.||+|+||.||++....++..||+|.+... .....+.+.+|+.+++.++|||++++++++...+..++|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 46888999999999999999998888899999998432 223346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 95 ~e~~~~~~L~~~~~~~--------------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~ 157 (293)
T cd06647 95 MEYLAGGSLTDVVTET--------------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 157 (293)
T ss_pred EecCCCCcHHHHHhhc--------------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEc
Confidence 9999999999998742 367889999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||++........ ......+++.|+|||.+.+..++.++||||||+++||+++|..||............. ....
T Consensus 158 dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~---~~~~ 232 (293)
T cd06647 158 DFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGT 232 (293)
T ss_pred cCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh---cCCC
Confidence 9999876543221 2233468889999999988889999999999999999999999997543321111110 0000
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+ ...........+.+++.+||+.+|++||++.+++.
T Consensus 233 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 233 P---------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred C---------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01112223457889999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=307.78 Aligned_cols=256 Identities=25% Similarity=0.339 Sum_probs=200.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE---- 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~---- 763 (1024)
..++|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence 4678999999999999999999998899999999985432 2235677899999999 899999999988653
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
+..++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~ 163 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLI---------CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT 163 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC
Confidence 358999999999999998874321 123488999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCC-----CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++.+||+|||++........ ......++..|+|||.+... .++.++|||||||++|||++|+.||........
T Consensus 164 ~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~ 241 (291)
T cd06639 164 EGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT 241 (291)
T ss_pred CCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH
Confidence 99999999999876533211 12234678899999987654 368899999999999999999999876443211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. . ...... ... ..+......+.+++.+||+.+|++||++.|+++
T Consensus 242 ~~---~-~~~~~~------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 242 LF---K-IPRNPP------PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH---H-HhcCCC------CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 1 100000 001 011223457899999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=285.54 Aligned_cols=261 Identities=24% Similarity=0.314 Sum_probs=212.7
Q ss_pred cCcchhHhhhCCCcc-ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEE
Q 001706 682 LGFTESNILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCC 759 (1024)
Q Consensus 682 ~~~~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 759 (1024)
..|.+..++++|++. ++||-|-.|.|..+..+.+++.+|+|++... ....+|++..-+. .|||||.++++
T Consensus 52 m~~k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidV 123 (400)
T KOG0604|consen 52 MDFKEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDV 123 (400)
T ss_pred cchhcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehh
Confidence 344556677888775 5789999999999999999999999998432 3466788877666 59999999998
Q ss_pred Eec----CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 760 ISS----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 760 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
|.. .....+|||.|+||.|...++.++. ..+++.++.+|+.||+.|+.|||+. .|.||||||
T Consensus 124 yeNs~~~rkcLLiVmE~meGGeLfsriq~~g~-----------~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKp 189 (400)
T KOG0604|consen 124 YENSYQGRKCLLIVMECMEGGELFSRIQDRGD-----------QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKP 189 (400)
T ss_pred hhhhccCceeeEeeeecccchHHHHHHHHccc-----------ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCCh
Confidence 754 4567899999999999999998774 5699999999999999999999999 999999999
Q ss_pred CCEEECC---CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 836 SNILLDS---EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 836 ~Nill~~---~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
+|+|.+. +..+||+|||+|+.-. ..........|+.|.|||++...+|+...|+||+||++|-|++|-+||+..
T Consensus 190 ENLLyt~t~~na~lKLtDfGFAK~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~ 266 (400)
T KOG0604|consen 190 ENLLYTTTSPNAPLKLTDFGFAKETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_pred hheeeecCCCCcceEecccccccccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccccc
Confidence 9999975 4579999999998643 244556678899999999999999999999999999999999999999875
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
....+..-..+.+..+ ...+..+.+...++...++|+.+++.+|++|.|..|+++
T Consensus 267 hg~aispgMk~rI~~g-------qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 267 HGLAISPGMKRRIRTG-------QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCccCChhHHhHhhcc-------CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 4332221111222111 123445566777888999999999999999999999875
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=306.95 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=195.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-HhccccCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
++|+..+.||+|+||.||+|.+..+++.||+|+++..... .....+..|+.+ ++..+||||+++++++...+..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 3678889999999999999999989999999998654321 223455566665 5566899999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ |+|.+++...... ...+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+
T Consensus 79 ~e~~~-~~l~~~l~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~ 146 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDK---------GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLC 146 (283)
T ss_pred hhhhc-ccHHHHHHHhccC---------CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEe
Confidence 99996 7888888653221 135899999999999999999999742 79999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
|||++..+... .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||...... .+......
T Consensus 147 dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~ 221 (283)
T cd06617 147 DFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--FQQLKQVV 221 (283)
T ss_pred ecccccccccc---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--HHHHHHHH
Confidence 99999865322 12223457889999998865 45688999999999999999999998643211 11111111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... .... ....+.++.+++.+||..+|++||++.++++
T Consensus 222 ~~~~-------~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 222 EEPS-------PQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred hcCC-------CCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100 0010 1123467899999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=310.45 Aligned_cols=265 Identities=27% Similarity=0.380 Sum_probs=201.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||.|++|.||+|....+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 47788999999999999999988899999998864332 22234578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++||
T Consensus 80 ~~~-~~l~~~~~~~~~-----------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~df 144 (284)
T cd07860 80 FLH-QDLKKFMDASPL-----------SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADF 144 (284)
T ss_pred ccc-cCHHHHHHhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 996 689998875432 3588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCC-CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
|++....... .......++..|+|||.+.+.. ++.++||||||+++|||+||+.||.+.+.........+.......
T Consensus 145 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07860 145 GLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 222 (284)
T ss_pred cchhhcccCc--cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9987653221 1222345688999999887654 588999999999999999999999765433222111111100000
Q ss_pred -c----------hhhhccCCCC---cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 -I----------TDALDKGIAE---PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 -~----------~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .......... .........+.+++.+||+.||++||+++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 223 VVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 0000000000 000112356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=314.59 Aligned_cols=263 Identities=24% Similarity=0.309 Sum_probs=201.5
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE----- 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 763 (1024)
+.++|+..+.||+|+||.||+|....+++.||+|++..... .....+.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 56789999999999999999999998999999999854322 233346678899999999999999999988643
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...|+||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~---------------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~ 153 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM---------------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 153 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh---------------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECC
Confidence 35799999996 588887752 267788899999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
++.+||+|||+++..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||...+.......+.
T Consensus 154 ~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~ 230 (353)
T cd07850 154 DCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKII 230 (353)
T ss_pred CCCEEEccCccceeCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 999999999999875332 12233467889999999999999999999999999999999999997654322221111
Q ss_pred HHhhc------------------cC------CchhhhccCC----CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 923 RHYAE------------------EK------PITDALDKGI----AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 923 ~~~~~------------------~~------~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... .. .......... ...........+.+++.+|++.||++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 231 EQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11000 00 0000000000 00001123466889999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=310.71 Aligned_cols=255 Identities=28% Similarity=0.353 Sum_probs=214.9
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCce
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 766 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 766 (1024)
..-+..|.+.+.||+|.|++|..|++..++..||+|.+.+.... ......+.+|+++|+.++|||||+++.+...+...
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 34456788899999999999999999999999999999766543 33345599999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
|+||||+.+|.+++|+....+ ........++.|+.+|++|||++ .|||||||++||+++.+.++
T Consensus 131 ylV~eya~~ge~~~yl~~~gr-------------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKHGR-------------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNI 194 (596)
T ss_pred EEEEEeccCchhHHHHHhccc-------------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccce
Confidence 999999999999999998775 45578889999999999999999 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCC-CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||++.++.. .......+|++.|.|||++.+.+| .+++|+||+|+++|-|+.|..||.+..-..+...+
T Consensus 195 kIaDfgfS~~~~~---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv---- 267 (596)
T KOG0586|consen 195 KIADFGFSTFFDY---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV---- 267 (596)
T ss_pred eeeccccceeecc---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh----
Confidence 9999999998853 334456789999999999999887 57899999999999999999999887654433222
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
+...++.+++. ..++.+++++++..+|.+|++.+++.+.-
T Consensus 268 ---------l~gk~rIp~~m--s~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 268 ---------LRGKYRIPFYM--SCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred ---------eeeeeccccee--echhHHHHHHhhccCccccCCHHHhhhhc
Confidence 11122222222 24677899999999999999999998643
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=306.19 Aligned_cols=265 Identities=24% Similarity=0.355 Sum_probs=198.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|+..+.||+|++|.||+|....+++.||||.+...... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 46788999999999999999999888999999998543221 1224567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ ++|.+++..... .+++...+.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~e~~~-~~L~~~~~~~~~------------~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 145 (291)
T cd07844 82 FEYLD-TDLKQYMDDCGG------------GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLA 145 (291)
T ss_pred EecCC-CCHHHHHHhCCC------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEEC
Confidence 99998 599998875432 478899999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCc-chHHHHHHHhhc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHT-SLAEWAWRHYAE 927 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~-~~~~~~~~~~~~ 927 (1024)
|||+++...... .......++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... ......+.....
T Consensus 146 dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T cd07844 146 DFGLARAKSVPS--KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGT 223 (291)
T ss_pred ccccccccCCCC--ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCC
Confidence 999987542211 11222346789999998875 45789999999999999999999998654421 111111111000
Q ss_pred cCC--------chhhhccCCCC--cc-------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKP--------ITDALDKGIAE--PC-------YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~--------~~~~~~~~~~~--~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+ ........... .. .........+++.+|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 224 PTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 00000000000 00 0011256789999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=303.34 Aligned_cols=255 Identities=24% Similarity=0.333 Sum_probs=201.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCC----
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSEN---- 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~---- 764 (1024)
.++|+..+.||+|++|.||+|....+++.||+|++.... ...+.+.+|+++++++ +||||+++++++.+..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 568999999999999999999998888999999885432 2346789999999999 7999999999986644
Q ss_pred --ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 765 --SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 765 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
..++||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~ 148 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRK---------KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTK 148 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEcc
Confidence 48999999999999999875331 013588999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-----CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++.++++|||.+....... .......++..|+|||++.. ..++.++||||||+++|||++|..||........
T Consensus 149 ~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 226 (275)
T cd06608 149 NAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA 226 (275)
T ss_pred CCeEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH
Confidence 9999999999987653321 22234568899999998753 3467899999999999999999999865432211
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... ... . ... ..........+.+++.+||..||++||++.|+++
T Consensus 227 ~~~~----~~~-~-----~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 227 LFKI----PRN-P-----PPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHh----hcc-C-----CCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111 000 0 000 1112224568899999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=301.07 Aligned_cols=245 Identities=21% Similarity=0.250 Sum_probs=192.5
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHh-ccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG-TIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.||+|+||.||+|....+++.||||++.............+..|..++. ..+|||++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999998889999999986543222233344555655544 45899999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 82 ~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 145 (260)
T cd05611 82 GDCASLIKTLG-------------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSR 145 (260)
T ss_pred CCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccce
Confidence 99999997543 378889999999999999999998 99999999999999999999999999987
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1024)
.... .....++..|+|||.+.+..++.++||||+|+++|||++|..||...+........ .....
T Consensus 146 ~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~----- 210 (260)
T cd05611 146 NGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNI----LSRRI----- 210 (260)
T ss_pred eccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----Hhccc-----
Confidence 6432 12345788999999998888999999999999999999999999765433222111 11100
Q ss_pred ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..........+..+.+++.+||+.+|++||++.++.+
T Consensus 211 --~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 211 --NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred --CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 0001111123478899999999999999998765544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=303.15 Aligned_cols=252 Identities=25% Similarity=0.365 Sum_probs=203.8
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||+|....++..||+|.+.... ......+.+.+|+++++.++||||+++++.+.+....++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK-MPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhh-ccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 3677889999999999999999889999999985532 222335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-cEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~D 850 (1024)
|+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++ .++++|
T Consensus 80 ~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d 145 (257)
T cd08225 80 YCDGGDLMKRINRQRG-----------VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGD 145 (257)
T ss_pred cCCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecc
Confidence 9999999999975432 2478999999999999999999998 999999999999999885 469999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 930 (1024)
||.+....... .......|++.|+|||+..+..++.++||||||+++|||++|+.||....... .........
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~-- 218 (257)
T cd08225 146 FGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ---LVLKICQGY-- 218 (257)
T ss_pred cccchhccCCc--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHhccc--
Confidence 99987664322 12223468899999999998899999999999999999999999986543322 221111110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .+.....+..+.+++.+||+.+|++||++.|+++
T Consensus 219 ~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 219 F---------APISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred C---------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0 0111123357889999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=342.45 Aligned_cols=255 Identities=27% Similarity=0.343 Sum_probs=208.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.-+++....||.|.||.||-|....+|+..|+|-++-.... ....+.+.+|..++..++|||+|++||+-...+..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34677889999999999999999999999999977543222 44567899999999999999999999999899999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||||++|+|.+.+.... ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++
T Consensus 1313 MEyC~~GsLa~ll~~gr-------------i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~ 1376 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR-------------IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYG 1376 (1509)
T ss_pred HHHhccCcHHHHHHhcc-------------hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEee
Confidence 99999999999998543 356666778899999999999999 99999999999999999999999
Q ss_pred ccccceecccCC--CCceecccccCcccCchhhccCCC---CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 850 DFGLAKMLAKQG--EPHTMSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 850 DFgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
|||.|+.+.... .+.......||+.|||||++.+.. ...++||||+|||..||+||+.||..-+... +
T Consensus 1377 DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~----a--- 1449 (1509)
T KOG4645|consen 1377 DFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW----A--- 1449 (1509)
T ss_pred cccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh----H---
Confidence 999999886542 122234567999999999998654 5678999999999999999999987544321 1
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
++-.+..+-..+.+...+.+=.+++..|+..||++|.++.|+++
T Consensus 1450 ------IMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1450 ------IMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ------HHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11122222223445556677889999999999999999988776
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=304.84 Aligned_cols=262 Identities=20% Similarity=0.233 Sum_probs=189.2
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEeccchhhh--HH------HHHHHHHHHHHHhccccCceeeEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLN--QK------LEKEFIAEIEILGTIRHANIVKLWCC 759 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~--~~------~~~~~~~E~~~l~~l~hpniv~l~~~ 759 (1024)
++|++.++||+|+||.||+|....+ +..+|+|+........ +. .......+...+..+.|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5789999999999999999998766 5677777643221110 00 01123344455666789999999987
Q ss_pred EecCC----ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 760 ISSEN----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 760 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
+.... ..++++|++. .++.+.+.... ..++..+..++.|++.|++|||+. +|+||||||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp 154 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-------------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKP 154 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc-------------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 65543 3467888774 46666665322 256778899999999999999998 999999999
Q ss_pred CCEEECCCCcEEEeccccceecccCCCC-----ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCC
Q 001706 836 SNILLDSEFKAKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY 910 (1024)
Q Consensus 836 ~Nill~~~~~~kl~DFgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~ 910 (1024)
+||+++.++.++|+|||+|+.+...+.. .......||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 155 ~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~ 234 (294)
T PHA02882 155 ENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWK 234 (294)
T ss_pred HHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999876432211 11223469999999999999999999999999999999999999997
Q ss_pred CCCC-cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 911 GDEH-TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 911 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
+... ..........+...- ..... .....+..+.+++..||..+|++||+++++.+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 235 GFGHNGNLIHAAKCDFIKRL-----HEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred ccccchHHHHHhHHHHHHHh-----hhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 6532 222221111111100 00000 01123477999999999999999999999998763
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=314.18 Aligned_cols=269 Identities=28% Similarity=0.381 Sum_probs=202.9
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC--C
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE--N 764 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~--~ 764 (1024)
.+.++|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++++ +||||+++++++... .
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 456789999999999999999999988899999998854322 223345677899999999 999999999988653 3
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++||||++ ++|..++... .++|..+..++.|++.||+|||+. +|+||||+|+||+++.++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~--------------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~ 144 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN--------------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDC 144 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCC
Confidence 6899999997 6999888643 377889999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCC---ceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 845 KAKIADFGLAKMLAKQGEP---HTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
.+||+|||.+......... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+.........
T Consensus 145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~ 224 (337)
T cd07852 145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK 224 (337)
T ss_pred cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 9999999999876443221 22334568899999998765 4678899999999999999999999875543322222
Q ss_pred HHHHhhcc-------------CCchhhhccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 921 AWRHYAEE-------------KPITDALDKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 921 ~~~~~~~~-------------~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
........ ....+....... .......+.++.+++.+||+.||++||++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 225 IIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 11111000 000000000000 00011134678999999999999999999999963
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=308.07 Aligned_cols=259 Identities=27% Similarity=0.363 Sum_probs=197.4
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 769 (1024)
++|+..+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.++.++. ||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 355667889999999999999998999999999864332 234567899999999996 99999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+. +++.++...... .....+++..+..++.|++.|++|||+. .+++||||||+||+++.++.++|+
T Consensus 82 ~e~~~-~~l~~l~~~~~~--------~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~ 150 (288)
T cd06616 82 MELMD-ISLDKFYKYVYE--------VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLC 150 (288)
T ss_pred Eeccc-CCHHHHHHHHHH--------hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEe
Confidence 99986 465554321100 0013588999999999999999999963 289999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC---CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|||+++.+.... ......++..|+|||++.+. .++.++||||+||++|||++|+.||.... ...........
T Consensus 151 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~ 225 (288)
T cd06616 151 DFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVK 225 (288)
T ss_pred ecchhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcC
Confidence 999997653321 22234678899999998876 68999999999999999999999986543 11111111111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... ..+........+..+.+++.+||+.||++||++.|+++
T Consensus 226 ~~~-------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 226 GDP-------PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCC-------CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110 11111111234568899999999999999999999886
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=331.75 Aligned_cols=256 Identities=29% Similarity=0.412 Sum_probs=190.9
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC--
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-- 764 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-- 764 (1024)
.....+|++.+.||+||||.|||++.+-+|+.||||++.... +......+.+|++.+++|+|||||+++..|.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 456778899999999999999999999999999999996654 4555678999999999999999999986542111
Q ss_pred --------------------------------------------------------------------------------
Q 001706 765 -------------------------------------------------------------------------------- 764 (1024)
Q Consensus 765 -------------------------------------------------------------------------------- 764 (1024)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred -------------------------------------ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHH
Q 001706 765 -------------------------------------SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807 (1024)
Q Consensus 765 -------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 807 (1024)
..||-||||+..++.++++..... -.-...|
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~------------~~~d~~w 700 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN------------SQRDEAW 700 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc------------hhhHHHH
Confidence 115566666665555555543310 0245678
Q ss_pred HHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc----------------cCCCCceeccccc
Q 001706 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA----------------KQGEPHTMSAVAG 871 (1024)
Q Consensus 808 ~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~----------------~~~~~~~~~~~~g 871 (1024)
+++.+|+.|++|+|++ |||||||||.||++|+++.|||+|||+|+... ........+..+|
T Consensus 701 rLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VG 777 (1351)
T KOG1035|consen 701 RLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVG 777 (1351)
T ss_pred HHHHHHHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccc
Confidence 9999999999999999 99999999999999999999999999998722 0112224567889
Q ss_pred CcccCchhhccCCC---CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCC--cccHH
Q 001706 872 SFGYFAPEYAYTTK---VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAE--PCYLE 946 (1024)
Q Consensus 872 t~~y~aPE~~~~~~---~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 946 (1024)
|..|+|||++.+.. |+.|+|+||+|||++||+. ||...-+ ...+...... ..+.. ....+
T Consensus 778 TalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME---Ra~iL~~LR~---------g~iP~~~~f~~~ 842 (1351)
T KOG1035|consen 778 TALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME---RASILTNLRK---------GSIPEPADFFDP 842 (1351)
T ss_pred eeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH---HHHHHHhccc---------CCCCCCcccccc
Confidence 99999999987654 9999999999999999985 4543211 0011111111 11111 11223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 947 EMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 947 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+.=..++.++++.||++||||.|++.
T Consensus 843 ~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 843 EHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 3345578999999999999999999986
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=334.47 Aligned_cols=273 Identities=22% Similarity=0.253 Sum_probs=214.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|.+.++||+|+||.|..++.+.+++.||.|++.+..-........|..|-.+|..-+.+.|+.+.-.|+|..+.|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 35789999999999999999999999999999998553222223345789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||||+||+|-.++.+.. .+++..++.++..|..||.-+|+. |+|||||||+|||+|..|++||+
T Consensus 154 MdY~pGGDlltLlSk~~-------------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLA 217 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFD-------------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLA 217 (1317)
T ss_pred EecccCchHHHHHhhcC-------------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeec
Confidence 99999999999998654 388999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhcc----C-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY----T-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
|||.+-.+..++ .......+|||-|.+||++. + +.|++.+|.||+||++|||+.|..||+.+.-...+..++..
T Consensus 218 DFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h 296 (1317)
T KOG0612|consen 218 DFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH 296 (1317)
T ss_pred cchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch
Confidence 999998775543 33455678999999999886 3 67999999999999999999999999976554444333322
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCCCCCcCccc
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAG 1004 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1024)
. . .+..|...+.+. .++++++.|--. .+..=|+.+..+++.||||. |
T Consensus 297 k----~-------~l~FP~~~~VSe------------------eakdLI~~ll~~--~e~RLgrngiedik~HpFF~--g 343 (1317)
T KOG0612|consen 297 K----E-------SLSFPDETDVSE------------------EAKDLIEALLCD--REVRLGRNGIEDIKNHPFFE--G 343 (1317)
T ss_pred h----h-------hcCCCcccccCH------------------HHHHHHHHHhcC--hhhhcccccHHHHHhCcccc--C
Confidence 0 0 011110111222 344444444222 23333466778889999999 8
Q ss_pred cccccccc
Q 001706 1005 YLFGFKRS 1012 (1024)
Q Consensus 1005 ~~~~~~~~ 1012 (1024)
++|.-.|.
T Consensus 344 ~~W~~iR~ 351 (1317)
T KOG0612|consen 344 IDWDNIRE 351 (1317)
T ss_pred CChhhhhh
Confidence 99976655
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=295.52 Aligned_cols=250 Identities=27% Similarity=0.373 Sum_probs=205.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||++....+++.|++|++..... ...+.+.+|+++++.++||+++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 36778899999999999999988899999999865432 345789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 78 ~~~~~~L~~~~~~~~------------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (253)
T cd05122 78 FCSGGSLKDLLKSTN------------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDF 142 (253)
T ss_pred cCCCCcHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeec
Confidence 999999999987643 2489999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......... ...
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~ 214 (253)
T cd05122 143 GLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-----NGP 214 (253)
T ss_pred ccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----cCC
Confidence 99987644321 2345688999999999988899999999999999999999999875532221111110 000
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. . ......+..+.+++.+||+.||++||++.|+++
T Consensus 215 ~~-----~--~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 215 PG-----L--RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CC-----c--CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 0 011112467899999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=303.88 Aligned_cols=253 Identities=27% Similarity=0.376 Sum_probs=205.9
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 768 (1024)
..+.|+..+.||+|++|.||+|.+..++..||+|++..... ..+.+.+|+++++.++|+|++++++++......++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 45568888999999999999999988899999999854332 35678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|
T Consensus 93 v~e~~~~~~L~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l 157 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF------------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKL 157 (286)
T ss_pred EEeccCCCcHHHHHHHhc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEE
Confidence 999999999999998643 2488999999999999999999998 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
+|||.+........ ......++..|+|||.+.+..++.++|||||||++|||++|..||............. ...
T Consensus 158 ~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~---~~~ 232 (286)
T cd06614 158 ADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT---TKG 232 (286)
T ss_pred Cccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcC
Confidence 99999876533211 1223457889999999998899999999999999999999999986543322111110 000
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .. .......+..+.+++.+||+.+|.+||++.++++
T Consensus 233 ~--~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 233 I--PP-------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred C--CC-------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0 00 0111123467899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=298.39 Aligned_cols=254 Identities=28% Similarity=0.384 Sum_probs=208.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv 769 (1024)
+|+..+.||+|++|.||+|....++..|++|++..... .....+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 36778899999999999999988899999999865432 234567899999999999999999999999888 889999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
+||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+
T Consensus 80 ~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~ 143 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-------------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLA 143 (260)
T ss_pred EEecCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEc
Confidence 99999999999997543 488999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||.+................++..|+|||...+..++.++||||||+++|+|++|..||...+.. ....+... .
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~-- 218 (260)
T cd06606 144 DFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--MAALYKIG-S-- 218 (260)
T ss_pred ccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHhcc-c--
Confidence 999998765433211133456889999999999888999999999999999999999999765521 11111111 0
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.......+...+..+.+++.+|++.+|++||++.|+++
T Consensus 219 -------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 -------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00111122233578999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=307.89 Aligned_cols=274 Identities=21% Similarity=0.305 Sum_probs=202.1
Q ss_pred cchhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC
Q 001706 684 FTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE 763 (1024)
Q Consensus 684 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 763 (1024)
+...+..++|+..+.||+|+||.||+|....+++.||||.+..... .......+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 5 FPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred CcccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 3445567889999999999999999999998999999998854322 122234567899999999999999999988665
Q ss_pred C--------ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 764 N--------SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 764 ~--------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
+ ..++||||+. ++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p 147 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN------------VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKA 147 (310)
T ss_pred cccccCCCceEEEEEcCCC-cCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 4 3499999997 58888876533 2488999999999999999999998 999999999
Q ss_pred CCEEECCCCcEEEeccccceecccCCCC--ceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 836 SNILLDSEFKAKIADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 836 ~Nill~~~~~~kl~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
+||+++.++.+||+|||++..+...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.+.
T Consensus 148 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 148 ANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred HHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999866432211 122334578899999988765 4788999999999999999999998765
Q ss_pred CCcchHHHHHHHhhccC-------Cchhhhcc-CCCCcc---------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 913 EHTSLAEWAWRHYAEEK-------PITDALDK-GIAEPC---------YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+.......+........ ...+..+. ...... .......+.+++.+||+.||++||+++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 228 TEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 43322222111110000 00000000 000000 0001245678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=310.25 Aligned_cols=271 Identities=21% Similarity=0.299 Sum_probs=200.0
Q ss_pred CCCccceeeecCcEEEEEEEEcC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceE
Q 001706 692 SLTESNLIGSGGSGQVYRIDING--AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKL 767 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 767 (1024)
.|+..+.||+|+||.||+|.... .++.||+|.+...........+.+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 36778899999999999999987 7899999998654322223346678899999999999999999999887 7899
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC----C
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS----E 843 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----~ 843 (1024)
+||||++ +++.+++...... ....+++..++.++.|++.|++|||+. +|+||||||+||+++. +
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQA--------KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccC--------CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCcc
Confidence 9999997 4677776543321 012578889999999999999999998 9999999999999999 8
Q ss_pred CcEEEeccccceecccCCC-CceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc-----
Q 001706 844 FKAKIADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTS----- 916 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~----- 916 (1024)
+.+||+|||+++....... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||.+.....
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch
Confidence 9999999999987643322 1222345678899999988764 57899999999999999999999997654332
Q ss_pred ----hHHHHHHH-----------hhccCCchhhhccCCCCccc----H-------HHHHHHHHHHHHccCCCCCCCCCHH
Q 001706 917 ----LAEWAWRH-----------YAEEKPITDALDKGIAEPCY----L-------EEMTTVYRLALICTSTLPSSRPSMK 970 (1024)
Q Consensus 917 ----~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~----~-------~~~~~l~~li~~cl~~dP~~RPs~~ 970 (1024)
....+... ...........+........ . ....++.+++.+|++.||++||++.
T Consensus 229 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 308 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308 (316)
T ss_pred hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 00000000 00000000000000000000 0 2235788999999999999999999
Q ss_pred HHHH
Q 001706 971 EVLQ 974 (1024)
Q Consensus 971 evl~ 974 (1024)
|+++
T Consensus 309 eil~ 312 (316)
T cd07842 309 EALE 312 (316)
T ss_pred HHhc
Confidence 9975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=313.21 Aligned_cols=267 Identities=24% Similarity=0.317 Sum_probs=200.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE----- 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 763 (1024)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 3467999999999999999999998899999999985321 223456788999999999999999999887553
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
...++|+||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~--------------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~ 142 (336)
T cd07849 81 NDVYIVQELME-TDLYKLIKT--------------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTN 142 (336)
T ss_pred ceEEEEehhcc-cCHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCC
Confidence 35799999997 588877753 2488999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCC-ceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
+.+||+|||++......... .......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.+.+........
T Consensus 143 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~ 222 (336)
T cd07849 143 CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLI 222 (336)
T ss_pred CCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999875432211 12233568899999998754 56889999999999999999999999765432221111
Q ss_pred HHHhhccC--Cchhhh-----------ccCCCCc---ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 922 WRHYAEEK--PITDAL-----------DKGIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 922 ~~~~~~~~--~~~~~~-----------~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
........ ...... ......+ .......++.+++.+||+.||++||++.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 223 LGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 000000 0000000 011224678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=303.41 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=202.0
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||.|+||.||++.+..+++.||+|++...........+.+.+|++++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999888999999998655443445567899999999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++....
T Consensus 81 ~~~l~~~~-------------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~ 144 (265)
T cd05579 81 ASLLENVG-------------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGL 144 (265)
T ss_pred HHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence 99997543 378999999999999999999998 99999999999999999999999999987643
Q ss_pred cCCC------CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 859 KQGE------PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 859 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
.... ........++..|+|||...+..++.++||||||+++||+++|..||.............. ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~---- 217 (265)
T cd05579 145 VRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN---GK---- 217 (265)
T ss_pred cCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC----
Confidence 3211 1122345578899999999988899999999999999999999999976553332222111 00
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
...+.....+..+.+++.+||+.+|++||++.++.+.|+
T Consensus 218 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 ------IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ------cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 001111112478899999999999999999966665443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=300.41 Aligned_cols=245 Identities=23% Similarity=0.250 Sum_probs=189.7
Q ss_pred eeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHH---HHhccccCceeeEEEEEecCCceEEEEeccC
Q 001706 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE---ILGTIRHANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~---~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
.||+|+||.||+|....+++.||+|.+.............+..|.. .++...||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4799999999999998889999999886533221222223344443 4444579999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
+++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 81 g~~L~~~l~~~~-------------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~ 144 (278)
T cd05606 81 GGDLHYHLSQHG-------------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA 144 (278)
T ss_pred CCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCc
Confidence 999999886432 489999999999999999999998 9999999999999999999999999998
Q ss_pred eecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchh
Q 001706 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933 (1024)
Q Consensus 855 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1024)
..+... ......|+..|+|||.+.++ .++.++||||+||++|||++|+.||..................
T Consensus 145 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------ 214 (278)
T cd05606 145 CDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM------ 214 (278)
T ss_pred cccCcc----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc------
Confidence 765322 11234689999999998754 6899999999999999999999999765332222111111000
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001706 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 974 (1024)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 974 (1024)
. ...+...+..+.+++.+|+..+|.+|| ++.|+++
T Consensus 215 --~----~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 215 --A----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --C----CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 0 011112346889999999999999999 8888864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=305.65 Aligned_cols=264 Identities=24% Similarity=0.340 Sum_probs=199.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++|+..+.||+|++|.||+|.+..+++.||+|.+..... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 568889999999999999999988899999998854322 2233467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-CCcEEEe
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIA 849 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~ 849 (1024)
||++ ++|.+++..... ..+++..+..++.||+.||+|||+. +++||||+|+||+++. ++.+||+
T Consensus 81 e~~~-~~l~~~~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~ 145 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD-----------FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLA 145 (294)
T ss_pred eccc-ccHHHHHHhCCC-----------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEc
Confidence 9996 688888764332 2357788889999999999999998 9999999999999985 5679999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||++...... ........+++.|+|||++.+. .++.++||||+||++|||++|+.||..................
T Consensus 146 dfg~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~- 222 (294)
T PLN00009 146 DFGLARAFGIP--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGT- 222 (294)
T ss_pred ccccccccCCC--ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-
Confidence 99999765322 1122334578899999988764 5789999999999999999999998765433222211111100
Q ss_pred CCchhhhc------------cCCCCc----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALD------------KGIAEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~------------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+...... ...... .....+.++.+++.+|++.+|++||++.++++
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 223 -PNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred -CChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 000000 01122356889999999999999999999986
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=298.49 Aligned_cols=254 Identities=23% Similarity=0.296 Sum_probs=201.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--Cce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR--KLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 766 (1024)
.+|+..+.||+|+||.||+|.+..++..||+|.+.... .........+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36788899999999999999998889999999874321 12234457899999999999999999999998764 457
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++|+||+++++|.+++.... .+++....+++.|++.|++|||+. +++||||+|+||+++.++.+
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-------------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~ 145 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-------------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNV 145 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCE
Confidence 89999999999999987543 377888999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCC-CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
+|+|||+++....... ........++..|+|||.+.+..++.++|+|||||++|||++|+.||....... .+.+..
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~ 222 (264)
T cd06653 146 KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA---AIFKIA 222 (264)
T ss_pred EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH---HHHHHH
Confidence 9999999976532111 111233568899999999999889999999999999999999999986543221 111111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. ......+......+.+++.+||+ +|.+||++.+++.
T Consensus 223 ~~----------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 TQ----------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred cC----------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11 11111233344678999999999 5799999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=279.87 Aligned_cols=253 Identities=24% Similarity=0.396 Sum_probs=200.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 768 (1024)
.++.+....||.|..|.||+++...++...|||.++.. .+.+..+++...+.++..-. +|+||+.+|||.....+++
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 34555667799999999999999999999999998654 34555678888888887764 9999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
.||.|. ..++.+++... +++++...-++...+..||.||-++ .+|+|||+||+|||+|+.|++|+
T Consensus 169 cMelMs-~C~ekLlkrik------------~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKl 233 (391)
T KOG0983|consen 169 CMELMS-TCAEKLLKRIK------------GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKL 233 (391)
T ss_pred HHHHHH-HHHHHHHHHhc------------CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEe
Confidence 999995 55666666544 3477777789999999999999876 39999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCC---CCCCCCcchhHHHHHHHHHhCCCCCCCCC-CcchHHHHHHH
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGKEANYGDE-HTSLAEWAWRH 924 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslGvil~el~tg~~p~~~~~-~~~~~~~~~~~ 924 (1024)
||||.+-++-+ +...+...|-+.|||||.+... +|+-++||||||++++|+.||+.||.+.+ +.+... .
T Consensus 234 CDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt----k 306 (391)
T KOG0983|consen 234 CDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT----K 306 (391)
T ss_pred ecccccceeec---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH----H
Confidence 99999977633 3344556788999999988744 68889999999999999999999998643 222211 1
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+....+ +.+.. ....++.+.+++..|+.+|+.+||.+.++++
T Consensus 307 vln~eP------P~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 307 VLNEEP------PLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHhcCC------CCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 111111 11111 1225678999999999999999999999875
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=302.30 Aligned_cols=265 Identities=25% Similarity=0.375 Sum_probs=202.5
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||.|++|.||+|++..+++.||||+++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 47788999999999999999988999999999865432 2223567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++ ++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++||
T Consensus 79 ~~~-~~l~~~~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 79 YMD-KDLKKYMDTHGV----------RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred cCC-ccHHHHHHhcCC----------CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeec
Confidence 998 589888875432 13589999999999999999999988 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc--
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE-- 928 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 928 (1024)
|++....... .......++..|+|||.+.+. .++.++||||+||++|||++|..||.+.+...............
T Consensus 145 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07836 145 GLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTE 222 (284)
T ss_pred chhhhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh
Confidence 9997653221 122334578899999988664 56889999999999999999999987665443322222111000
Q ss_pred ---------CCchhhhccCC---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 ---------KPITDALDKGI---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ---------~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........... ........+..+.+++.+|++.||.+||+++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 223 STWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000 00011123467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=283.23 Aligned_cols=260 Identities=24% Similarity=0.313 Sum_probs=203.9
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEEEeccCC
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
+.+|+|+|+.|--+....++..||||++.+. ....+.++.+|++++...+ |+||+.++++|+++...|+|||-|.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 6799999999999998889999999998443 4567789999999999995 99999999999999999999999999
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC---cEEEeccc
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF---KAKIADFG 852 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DFg 852 (1024)
|+|..++++++ .+++..+.++..+|+.||.+||.+ ||.|||+||+|||-.... -||||||.
T Consensus 161 GplLshI~~~~-------------~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 161 GPLLSHIQKRK-------------HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred chHHHHHHHhh-------------hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999765 489999999999999999999998 999999999999997664 48999999
Q ss_pred cceecccCCC-----CceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc------
Q 001706 853 LAKMLAKQGE-----PHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS------ 916 (1024)
Q Consensus 853 la~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~------ 916 (1024)
++.-+....+ .......+|+-.|||||+.. ...|+.+.|.||+|||+|-|++|-.||.+....+
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG 304 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG 304 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence 8865432211 11223466888999999754 2358889999999999999999999998643321
Q ss_pred -hH----HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcCCC
Q 001706 917 -LA----EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCCPT 982 (1024)
Q Consensus 917 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~ 982 (1024)
.. +.....+.++. ..+....+...+.+..+++...+..|+..|.++.+++. ..+.+.+.
T Consensus 305 e~Cr~CQ~~LFesIQEGk-------YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 305 EVCRVCQNKLFESIQEGK-------YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred CccHHHHHHHHHHHhccC-------CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 11 11111111111 11222233344567788999999999999999999986 34444443
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=302.99 Aligned_cols=260 Identities=22% Similarity=0.236 Sum_probs=197.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecC--CceEEE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSE--NSKLLV 769 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~lv 769 (1024)
|+..+.||+|+||.||+|....++..||+|+++...... ......+|+.+++++. |||++++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 566788999999999999998889999999986543211 1234557888999885 99999999999887 889999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||++ +++.+++.... ..++|..++.++.|++.||+|||+. +++||||+|+||+++. +.+||+
T Consensus 79 ~e~~~-~~l~~~l~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~ 141 (282)
T cd07831 79 FELMD-MNLYELIKGRK------------RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLA 141 (282)
T ss_pred EecCC-ccHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEE
Confidence 99997 68888876533 2488999999999999999999998 9999999999999999 999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
|||+++...... ......++..|+|||++.+ ..++.++||||+||++|||++|..||.+.+..+............
T Consensus 142 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07831 142 DFGSCRGIYSKP---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTP 218 (282)
T ss_pred ecccccccccCC---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 999998764322 2223457889999997654 567889999999999999999999997665443333322211110
Q ss_pred CC----------chhhhccCCC----CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KP----------ITDALDKGIA----EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~----------~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. .......... .......+..+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00 0000000000 0001233578999999999999999999999976
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=328.10 Aligned_cols=274 Identities=21% Similarity=0.237 Sum_probs=192.9
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCC-cEEEEE--------------EeccchhhhHHHHHHHHHHHHHHhccccCc
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAG-EFVAVK--------------RIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK--------------~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 752 (1024)
.+.++|++.+.||+|+||+||++...... ..+++| ++.+...........+.+|++++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 45678999999999999999998764322 222222 111111112234567899999999999999
Q ss_pred eeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCC
Q 001706 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRD 832 (1024)
Q Consensus 753 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 832 (1024)
|+++++++.+.+..|+|+|++. ++|.+++...... ............++.|++.||+|||++ +|+|||
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~--------~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrD 292 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFD--------WKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRD 292 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhcccc--------ccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 9999999999999999999995 6787777643211 011233556778999999999999998 999999
Q ss_pred CCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 833 VKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 833 lk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
|||+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|+.++...
T Consensus 293 LKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~ 371 (501)
T PHA03210 293 IKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGD 371 (501)
T ss_pred CCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccC
Confidence 999999999999999999999987643322 2223457899999999999999999999999999999999998765543
Q ss_pred CCcchHHHHHHHhhccC----C-------chhhhccC-C--CCcc------cHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 001706 913 EHTSLAEWAWRHYAEEK----P-------ITDALDKG-I--AEPC------YLEEMTTVYRLALICTSTLPSSRPSMKEV 972 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~----~-------~~~~~~~~-~--~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~ev 972 (1024)
................. . +.+.++.. . .... ......++.+++.+|++.||++||++.|+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el 451 (501)
T PHA03210 372 GGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL 451 (501)
T ss_pred CCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH
Confidence 32221111111111000 0 00000000 0 0000 00112456778999999999999999999
Q ss_pred HH
Q 001706 973 LQ 974 (1024)
Q Consensus 973 l~ 974 (1024)
++
T Consensus 452 L~ 453 (501)
T PHA03210 452 LA 453 (501)
T ss_pred hh
Confidence 86
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=304.99 Aligned_cols=264 Identities=28% Similarity=0.381 Sum_probs=201.8
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--CceEEEE
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKLLVY 770 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~ 770 (1024)
|++.+.||+|+||.||+|....+++.||+|++.... ........+.+|+++++.++|||++++++++.+. +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567789999999999999998889999999997553 2233346788999999999999999999999887 8899999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||++ ++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||+|+||++++++.++++|
T Consensus 80 e~~~-~~l~~~~~~~~------------~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d 143 (287)
T cd07840 80 EYMD-HDLTGLLDSPE------------VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLAD 143 (287)
T ss_pred cccc-ccHHHHHhccC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcc
Confidence 9997 58988886542 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
||.+........ .......++..|+|||.+.+ ..++.++||||||+++|||++|..||....................
T Consensus 144 ~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07840 144 FGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPT 222 (287)
T ss_pred ccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc
Confidence 999987644321 12233456788999997765 4678999999999999999999999876554332222221110000
Q ss_pred C-----chhh-----h------ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 P-----ITDA-----L------DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~-----~~~~-----~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .... . ............+..+.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 223 DENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 0000 0 000000000002567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=300.76 Aligned_cols=263 Identities=25% Similarity=0.332 Sum_probs=200.8
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc---ccCceeeEEEEEecCCc----
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI---RHANIVKLWCCISSENS---- 765 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~---- 765 (1024)
|++.+.||+|+||.||+|....+++.||+|+++.... .......+.+|+.+++++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 5677899999999999999988899999999865433 222345667788877766 59999999999988776
Q ss_pred -eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 766 -KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 766 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
.+++|||+. ++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~-----------~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~ 144 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPK-----------PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDG 144 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCC
Confidence 899999997 589998875432 2488999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
.+||+|||.+..+.... ......++..|+|||.+.+..++.++|||||||++|||++|..||.+.........+...
T Consensus 145 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07838 145 QVKIADFGLARIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDV 221 (287)
T ss_pred CEEEeccCcceeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHH
Confidence 99999999998764322 122335788999999999999999999999999999999998888765544333322221
Q ss_pred hhccCCch---------hhhccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 925 YAEEKPIT---------DALDKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~---------~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........ ........ .....+....+.+++.+||+.||++||++.|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 222 IGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 11100000 00000000 0111233467789999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=305.50 Aligned_cols=264 Identities=27% Similarity=0.364 Sum_probs=200.4
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||.|++|.||+|.+..++..||+|++..... .....+.+.+|+++++.++|||++++++++.+.+..++||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 5677899999999999999988899999999864422 222345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
++ ++|.+++..... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++|+|||
T Consensus 80 ~~-~~l~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~ 144 (283)
T cd07835 80 LD-LDLKKYMDSSPL-----------TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFG 144 (283)
T ss_pred cC-cCHHHHHhhCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecc
Confidence 95 799999876542 3489999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC--
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK-- 929 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 929 (1024)
.+....... .......++..|+|||++.+. .++.++||||||+++|||++|..||...+.......+.+......
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd07835 145 LARAFGVPV--RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDED 222 (283)
T ss_pred cccccCCCc--cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChH
Confidence 997653221 112233568899999987664 578899999999999999999999876543221111111100000
Q ss_pred ---------CchhhhccC---CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 ---------PITDALDKG---IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ---------~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
......... .........+..+.+++.+||+.||++||+++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 223 VWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000 000111122367889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=307.01 Aligned_cols=267 Identities=28% Similarity=0.344 Sum_probs=201.9
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC--Cce
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSK 766 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 766 (1024)
..++|+..+.||+|+||.||+|.+..+++.||+|+++..... ......+.+|++++++++|||++++++++.+. +..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 357899999999999999999999989999999998643321 12233567899999999999999999998764 468
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||++ ++|.+++.... ..+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~------------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 147 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP------------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCL 147 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 99999997 58888887533 3488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||+|||.+....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+.......+....
T Consensus 148 kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~ 225 (309)
T cd07845 148 KIADFGLARTYGLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLL 225 (309)
T ss_pred EECccceeeecCCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 999999998764322 12223345788999998865 457899999999999999999999997655443333222211
Q ss_pred hccC-Cc----------hhhhccCCCCc----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 926 AEEK-PI----------TDALDKGIAEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 926 ~~~~-~~----------~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... .. ........... ........+.+++.+|++.||++||++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 226 GTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 00 00000000000 00112467789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=302.85 Aligned_cols=246 Identities=21% Similarity=0.356 Sum_probs=199.7
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccC
Q 001706 695 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 695 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
...+||+|+||.||++....+++.||||++... .......+.+|+.+++.++|||++++++++...+..++||||++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 346799999999999999889999999987432 22345679999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
+++|.+++... .+++.....++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++
T Consensus 101 ~~~L~~~~~~~--------------~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~ 163 (292)
T cd06657 101 GGALTDIVTHT--------------RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 163 (292)
T ss_pred CCcHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccc
Confidence 99999987532 378899999999999999999998 9999999999999999999999999998
Q ss_pred eecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhh
Q 001706 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934 (1024)
Q Consensus 855 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1024)
....... .......+++.|+|||.+.+..++.++|+||+|+++|||++|..||.+...............
T Consensus 164 ~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-------- 233 (292)
T cd06657 164 AQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------- 233 (292)
T ss_pred eeccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC--------
Confidence 7653321 122335688999999999888899999999999999999999999876544322222211110
Q ss_pred hccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 935 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... .....+..+.+++.+||+.+|.+||++.++++
T Consensus 234 --~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 234 --PKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred --cccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0000 11122356788999999999999999999886
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=307.70 Aligned_cols=263 Identities=21% Similarity=0.283 Sum_probs=196.4
Q ss_pred ceeeec--CcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccC
Q 001706 697 NLIGSG--GSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 697 ~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
..||+| +||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 999999999988999999999865432 23445789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+
T Consensus 83 ~~~l~~~l~~~~~-----------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~ 148 (328)
T cd08226 83 YGSANSLLKTYFP-----------EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHL 148 (328)
T ss_pred CCCHHHHHHhhcc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHH
Confidence 9999999886432 3478899999999999999999988 9999999999999999999999999865
Q ss_pred eecccCCCCce-----ecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh-
Q 001706 855 KMLAKQGEPHT-----MSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA- 926 (1024)
Q Consensus 855 ~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~- 926 (1024)
........... .....++..|+|||++.+. .++.++||||+||++|||++|..||.................
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 149 YSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred hhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 43322111111 1112345679999998764 478999999999999999999999875433221111000000
Q ss_pred cc--------------------------CCch-----hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EE--------------------------KPIT-----DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~--------------------------~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.. .... .........+........+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 0000 000011112223345678999999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=302.80 Aligned_cols=265 Identities=25% Similarity=0.321 Sum_probs=197.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+.|+..+.||+|+||.||+|....+++.||+|++..... ......+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3578889999999999999999988899999999854322 12234677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+. +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 82 ~e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~ 145 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP------------GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLA 145 (291)
T ss_pred Eeccc-CCHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEe
Confidence 99996 77777765432 2367888889999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCc-chHHHHHHHhhc
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHT-SLAEWAWRHYAE 927 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~-~~~~~~~~~~~~ 927 (1024)
|||+++...... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ......+.....
T Consensus 146 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~ 223 (291)
T cd07870 146 DFGLARAKSIPS--QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGV 223 (291)
T ss_pred ccccccccCCCC--CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCC
Confidence 999987543221 112234578899999988764 5788999999999999999999998754321 111111110000
Q ss_pred c-----------CCchhhhccCC-CCc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 E-----------KPITDALDKGI-AEP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~-----------~~~~~~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ........... ... ........+.+++.+|++.||++|||+.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 224 PTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred CChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 00000000000 000 00011357789999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=283.40 Aligned_cols=280 Identities=20% Similarity=0.280 Sum_probs=223.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 768 (1024)
+++|...++||+|+|++|..+++..+.+.||+|+++++...+++..+-++.|..+..+- +||.+|.+..+|+.+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 56789999999999999999999999999999999887766666677788898888877 79999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 848 (1024)
|.||++||+|--+++.+.+ ++++.++.+...|+.||.|||+. ||++||+|..||++|.+|++|+
T Consensus 329 vieyv~ggdlmfhmqrqrk-------------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikl 392 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-------------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKL 392 (593)
T ss_pred EEEEecCcceeeehhhhhc-------------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceee
Confidence 9999999999888776554 89999999999999999999999 9999999999999999999999
Q ss_pred eccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC----CCCcchHHHHHHH
Q 001706 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG----DEHTSLAEWAWRH 924 (1024)
Q Consensus 849 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~----~~~~~~~~~~~~~ 924 (1024)
.|+|+++--.. .....+..+|||.|.|||.+++..|....|.|++||+++||+.|+.||.- +.+....++..+.
T Consensus 393 tdygmcke~l~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv 470 (593)
T KOG0695|consen 393 TDYGMCKEGLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV 470 (593)
T ss_pred cccchhhcCCC--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH
Confidence 99999875322 23345678999999999999999999999999999999999999999962 1222233333332
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcc--cCCCCCCCCCcCc
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKK--MGRDVDSAPLLGT 1002 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~ 1002 (1024)
+.+. .++.+. ..+-....+++.-+++||.+| .|.+. .-.++.+|+||.
T Consensus 471 ilek---------qiripr--slsvkas~vlkgflnkdp~er------------------lgc~~~~g~~dik~h~ffr- 520 (593)
T KOG0695|consen 471 ILEK---------QIRIPR--SLSVKASHVLKGFLNKDPKER------------------LGCRPQTGFSDIKSHAFFR- 520 (593)
T ss_pred Hhhh---------cccccc--eeehhhHHHHHHhhcCCcHHh------------------cCCCcccchhhhhcchhhh-
Confidence 2221 111111 111233344555555555555 44433 456889999999
Q ss_pred cccccccccccchhcc
Q 001706 1003 AGYLFGFKRSKKVAAE 1018 (1024)
Q Consensus 1003 ~~~~~~~~~~~~~~~~ 1018 (1024)
.++|.++++|...+-
T Consensus 521 -~idwd~leqk~v~pp 535 (593)
T KOG0695|consen 521 -SIDWDLLEQKQVLPP 535 (593)
T ss_pred -hCCHHHHhhcccCCC
Confidence 899999999877653
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=296.16 Aligned_cols=254 Identities=27% Similarity=0.391 Sum_probs=208.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|+||.||++.+..++..||+|++..... .....+.+.+|+++++.++|||++++.+.+.+.+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 47778899999999999999988899999999865432 23456779999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++..... ....+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+||
T Consensus 80 ~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~ 147 (258)
T cd08215 80 YADGGDLSQKIKKQKK---------EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDF 147 (258)
T ss_pred ecCCCcHHHHHHHhhc---------cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCc
Confidence 9999999999986531 113589999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+....... .......+++.|+|||...+..++.++||||+|+++|+|++|+.||...+......... ...
T Consensus 148 ~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~----~~~-- 219 (258)
T cd08215 148 GISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL----KGQ-- 219 (258)
T ss_pred cceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh----cCC--
Confidence 9998764432 12334568889999999999999999999999999999999999986654332222111 100
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+.+......+.+++.+||..+|++||++.|+++
T Consensus 220 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 220 --------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11112233467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=297.58 Aligned_cols=252 Identities=27% Similarity=0.346 Sum_probs=207.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|++.+.||+|+||.||++....+++.||+|.+..... .......+.+|+++++.++||||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 47778899999999999999988899999999864332 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++...... ...+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+|++||
T Consensus 80 ~~~~~~L~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~ 147 (256)
T cd08530 80 YAPFGDLSKAISKRKKK---------RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDL 147 (256)
T ss_pred hcCCCCHHHHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeec
Confidence 99999999998763321 23588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|++...... ......+++.|+|||...+..++.++|+||+|+++|||++|+.||...+..........
T Consensus 148 g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-------- 215 (256)
T cd08530 148 GISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR-------- 215 (256)
T ss_pred cchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------
Confidence 999876443 12234578899999999999999999999999999999999999976554322221111
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+...........++.+++.+|++.+|++||++.|+++
T Consensus 216 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 ------GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111122344578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=303.91 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=200.6
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
..|+..+.||+|+||.||+|+...+++.||+|.+...........+++.+|+++++.++|||++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777789999999999999998889999999886433333444567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
||+. |++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|
T Consensus 95 e~~~-~~l~~~~~~~~------------~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~d 158 (308)
T cd06634 95 EYCL-GSASDLLEVHK------------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGD 158 (308)
T ss_pred EccC-CCHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECC
Confidence 9996 68887775432 2378899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||++...... ....+++.|+|||.+. ...++.++|||||||++|||++|+.||...+........ ...
T Consensus 159 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~ 229 (308)
T cd06634 159 FGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQN 229 (308)
T ss_pred cccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH---hhc
Confidence 9998765321 2345788999999874 356788999999999999999999998654322111111 000
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 977 (1024)
. ............+.+++.+||+.+|++||++.++++.-.
T Consensus 230 ~----------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 230 E----------SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred C----------CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 0 011111233467889999999999999999999997533
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=303.59 Aligned_cols=253 Identities=24% Similarity=0.325 Sum_probs=206.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 769 (1024)
++|...+.||+|+||.||+|....+++.||+|++...........+.+.+|++++++++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999998899999999986543333444578999999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++++
T Consensus 81 ~e~~~~~~L~~~l~~~~-------------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~ 144 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-------------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKIT 144 (280)
T ss_pred EcCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEec
Confidence 99999999999997543 489999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCCCC------------------ceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 850 DFGLAKMLAKQGEP------------------HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 850 DFgla~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
|||++......... .......++..|+|||...+..++.++||||+|+++||+++|+.||..
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 145 DFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred CCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999876433211 122334578899999999988899999999999999999999999876
Q ss_pred CCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 001706 912 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM----KEVLQ 974 (1024)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 974 (1024)
........... ... ...+...+..+.+++.+||+.+|++||++ .|+++
T Consensus 225 ~~~~~~~~~~~---~~~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 225 SNEYLTFQKIL---KLE------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ccHHHHHHHHH---hcC------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 54322211111 000 11112224678999999999999999999 66653
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=304.41 Aligned_cols=268 Identities=27% Similarity=0.354 Sum_probs=202.4
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN---- 764 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 764 (1024)
..++|+..+.||+|+||.||+|....+++.||+|+++.... .......+.+|+++++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 46789999999999999999999988899999999864432 1222356788999999999999999999887654
Q ss_pred ------ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 765 ------SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 765 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
..++|+||+++ ++.+++.... ..+++..++.++.|++.||+|||+. +|+||||+|+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~ni 147 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL------------VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNI 147 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 78999999985 7777766432 2488999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcch
Q 001706 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917 (1024)
Q Consensus 839 ll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~ 917 (1024)
++++++.+||+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+....
T Consensus 148 li~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~ 226 (302)
T cd07864 148 LLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ 226 (302)
T ss_pred EECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999987643321 11222346788999998765 4578899999999999999999999876554433
Q ss_pred HHHHHHHhhccCCc--hhhh--------ccC--C---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 918 AEWAWRHYAEEKPI--TDAL--------DKG--I---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 918 ~~~~~~~~~~~~~~--~~~~--------~~~--~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...+........+. .... +.. . ........+..+.+++..||+.||++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33332221111000 0000 000 0 00001112467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=302.90 Aligned_cols=269 Identities=22% Similarity=0.300 Sum_probs=199.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCc----
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENS---- 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~---- 765 (1024)
++|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 368888999999999999999998999999998754322 1222357888999999995 6999999999877655
Q ss_pred -eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-C
Q 001706 766 -KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-E 843 (1024)
Q Consensus 766 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~ 843 (1024)
.|+||||+++ +|.+++...... ....+++..++.++.||+.||+|||+. +|+||||+|+||+++. +
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~--------~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~ 147 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRG--------PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQK 147 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCC
Confidence 8999999985 899888754321 013579999999999999999999998 9999999999999998 8
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
+.+||+|||.++.+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||.+.........+.
T Consensus 148 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 148 GLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred CeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 8999999999986532211 1223356888999998765 457899999999999999999999987654332221111
Q ss_pred HHhhccCC--------chhhhc-cCCCC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 923 RHYAEEKP--------ITDALD-KGIAE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 923 ~~~~~~~~--------~~~~~~-~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........ ...... ..... .........+.+++.+||+.||++||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11100000 000000 00000 000123467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=293.89 Aligned_cols=250 Identities=29% Similarity=0.437 Sum_probs=205.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+|+..+.||+|++|.||++.....++.||+|.+..... .....+.+.+|++++++++|||++++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 47778999999999999999988899999999866533 23445789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+||
T Consensus 80 ~~~~~~L~~~~~~~~-------------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~ 143 (254)
T cd06627 80 YAENGSLRQIIKKFG-------------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADF 143 (254)
T ss_pred cCCCCcHHHHHHhcc-------------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEecc
Confidence 999999999987543 388999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCc
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 931 (1024)
|.+........ ......++..|+|||...+..++.++||||+|+++|+|++|+.||....... ..+.......
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~-- 216 (254)
T cd06627 144 GVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA---ALFRIVQDDH-- 216 (254)
T ss_pred ccceecCCCcc--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHhccCC--
Confidence 99987644322 1233567889999999988888999999999999999999999987544211 1111111100
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
...+...+..+.+++.+||..+|++||++.|++.
T Consensus 217 ---------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 ---------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0111223467889999999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=302.32 Aligned_cols=247 Identities=28% Similarity=0.406 Sum_probs=198.7
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|...+.||+|+||.||+|....+++.||+|++...........+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66667899999999999999888999999998654443444456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+. +++.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 103 ~~-~~l~~~l~~~~------------~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 103 CL-GSASDLLEVHK------------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred CC-CCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecC
Confidence 96 67888776433 2478999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhcc---CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
++..... .....++..|+|||++. ...++.++|||||||++|||++|..||...+......... ....
T Consensus 167 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~---~~~~ 237 (313)
T cd06633 167 SASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---QNDS 237 (313)
T ss_pred CCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCC
Confidence 8864321 22356888999999874 4568889999999999999999999987654332222111 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
+ .......+..+.+++.+||+.+|++||++.+++.
T Consensus 238 ~----------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 238 P----------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred C----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0011122356889999999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=294.30 Aligned_cols=245 Identities=21% Similarity=0.284 Sum_probs=191.8
Q ss_pred hhhCCCcccee--eecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCc
Q 001706 689 ILSSLTESNLI--GSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENS 765 (1024)
Q Consensus 689 ~~~~~~~~~~i--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 765 (1024)
+.+.|+..+.+ |+|+||.||++....++..+|+|.+...... . .|+.....+ +|||++++++++...+.
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------~--~e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------A--IEPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------h--hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 45566666666 9999999999999889999999998542211 0 122222222 79999999999999999
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF- 844 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~- 844 (1024)
.++||||+++++|.+++.... .+++..+..++.|+++|++|||+. +++||||+|+||+++.++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG-------------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKD 147 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCC
Confidence 999999999999999997543 488999999999999999999998 999999999999999998
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
.++|+|||.+...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||............+..
T Consensus 148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 221 (267)
T PHA03390 148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK 221 (267)
T ss_pred eEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence 9999999998765322 1246889999999999999999999999999999999999999754433221111111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-MKEVLQ 974 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 974 (1024)
... . ........+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 222 ~~~-~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 222 RQQ-K----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hhc-c----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 000 0 00112234578899999999999999996 588774
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=309.00 Aligned_cols=266 Identities=23% Similarity=0.326 Sum_probs=201.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec----CCce
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----ENSK 766 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~ 766 (1024)
++|+..+.||+|+||.||+|....+++.||+|++..... .....+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 678888999999999999999998999999999865322 22335677889999999999999999887753 3468
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+. ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~ 146 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-------------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCEL 146 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcE
Confidence 99999996 68999887533 388999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCC--ceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 847 KIADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
||+|||++......... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+.......+..
T Consensus 147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~ 226 (334)
T cd07855 147 RIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226 (334)
T ss_pred EecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHH
Confidence 99999999765432211 12234568899999998765 4688999999999999999999999976543322211111
Q ss_pred Hhhcc----------CCchhhhcc-CCCCc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 HYAEE----------KPITDALDK-GIAEP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ~~~~~----------~~~~~~~~~-~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... ..+...... ..... .....+.++.+++.+||+.+|++||++++++.
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 10000 000000000 00000 01223578999999999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=299.08 Aligned_cols=259 Identities=22% Similarity=0.278 Sum_probs=201.7
Q ss_pred CCCccceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhhh-HHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCce
Q 001706 692 SLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLN-QKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 766 (1024)
+|+..+.||+|++|.||++... .+++.||||+++...... ....+.+.+|+++++++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677889999999999998863 356789999986433222 23456788999999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~ 144 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-------------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHV 144 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-------------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCE
Confidence 99999999999999987532 378889999999999999999988 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCC--CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK--VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
+++|||+++.+...... ......++..|+|||...+.. .+.++||||||+++|||++|..||...............
T Consensus 145 ~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 223 (288)
T cd05583 145 VLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR 223 (288)
T ss_pred EEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH
Confidence 99999998765433211 122345789999999987665 788999999999999999999998644322211111111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 978 (1024)
.... ..+.+......+.+++.+||+.||++||++.++.+.|+.
T Consensus 224 ~~~~-----------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 224 ILKS-----------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHcc-----------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 1111 011122234678899999999999999999888776544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=307.85 Aligned_cols=270 Identities=24% Similarity=0.313 Sum_probs=203.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----C
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE-----N 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 764 (1024)
..+|.+.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3578889999999999999999998999999999864322 222345677899999999999999999887653 3
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++|+||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~ 145 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ-------------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANC 145 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 5799999996 78988887533 388899999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
.+||+|||+++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+..........
T Consensus 146 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 223 (337)
T cd07858 146 DLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE 223 (337)
T ss_pred CEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence 99999999998764322 22334567889999998765 4688999999999999999999999876543222211111
Q ss_pred Hhhcc----------CCchhhhcc---CCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 001706 924 HYAEE----------KPITDALDK---GIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI--LRRC 979 (1024)
Q Consensus 924 ~~~~~----------~~~~~~~~~---~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 979 (1024)
..... ......... ... .......+..+.+++.+||+.+|++||+++|+++. +...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 10000 000000000 000 00112345678899999999999999999999875 5554
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-33 Score=309.03 Aligned_cols=203 Identities=30% Similarity=0.425 Sum_probs=176.3
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC------Cce
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------NSK 766 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~ 766 (1024)
|...+.||+|+||.||+|+.+.+|+.||||.+.... ..+..+...+|++++++++|||||++++.-.+. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 445678999999999999999999999999986644 345578899999999999999999998875443 356
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC--CCC
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD--SEF 844 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~ 844 (1024)
.+|||||.+|||...+..... ...+++...+.+..+++.||.|||++ +|+||||||.||++- ++|
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN----------~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedg 159 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN----------AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDG 159 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc----------ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCC
Confidence 899999999999999997765 35799999999999999999999999 999999999999983 334
Q ss_pred c--EEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCC
Q 001706 845 K--AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDE 913 (1024)
Q Consensus 845 ~--~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~ 913 (1024)
. -||+|||.|+-+.++ ......+||..|.+||.... +.|+..+|.|||||++||++||..||....
T Consensus 160 q~IyKLtDfG~Arel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 160 QSIYKLTDFGAARELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ceEEeeecccccccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 3 699999999987544 36778899999999999884 888999999999999999999999997643
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-32 Score=298.19 Aligned_cols=263 Identities=25% Similarity=0.343 Sum_probs=204.0
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|++|.||+|....+++.+|+|++..... .......+.+|++++++++||||+++++++.++...++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 5667899999999999999988899999999865432 223456888999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
++ +++.+++.... ..+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|||
T Consensus 80 ~~-~~l~~~l~~~~------------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~ 143 (283)
T cd05118 80 MD-TDLYKLIKDRQ------------RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFG 143 (283)
T ss_pred cC-CCHHHHHHhhc------------ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeee
Confidence 97 48888887533 2488999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC-
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP- 930 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 930 (1024)
.+....... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...+..+.............+
T Consensus 144 ~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd05118 144 LARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE 221 (283)
T ss_pred eeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchH
Confidence 998764432 122335678899999998876 7899999999999999999999998765543322222111100000
Q ss_pred ----chh--------hhccCC--CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ----ITD--------ALDKGI--AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ----~~~--------~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... ...... ........+.++.+++.+||+.||.+||++.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 000000 00111234578999999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=299.25 Aligned_cols=262 Identities=24% Similarity=0.291 Sum_probs=199.0
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEEEe
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e 771 (1024)
|+..+.||+|++|+||+|....+++.||||++...... .......+|+..+++++ |||++++++++.+.+..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 56778999999999999999888999999998543221 22334567999999998 9999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|+ +|+|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+||
T Consensus 79 ~~-~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 79 YM-EGNLYQLMKDRKG-----------KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred cC-CCCHHHHHHhccc-----------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeec
Confidence 99 7899998876541 3489999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCceecccccCcccCchhhcc-CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc--
Q 001706 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE-- 928 (1024)
Q Consensus 852 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 928 (1024)
|.+....... ......++..|+|||.+. ...++.++|+||||+++|||++|+.||...................
T Consensus 144 ~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (283)
T cd07830 144 GLAREIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTK 220 (283)
T ss_pred ccceeccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCCh
Confidence 9998654322 223356788999999875 4457899999999999999999998886654332222111100000
Q ss_pred ----------CCchhhhccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 ----------KPITDALDKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ----------~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
............ ..........+.+++.+||+.||++||++.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 221 QDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000000 0001112467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.8e-32 Score=297.26 Aligned_cols=248 Identities=22% Similarity=0.285 Sum_probs=193.7
Q ss_pred CCCccceeeecCcEEEEEEEEc---CCCcEEEEEEeccchhhh-HHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCce
Q 001706 692 SLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLN-QKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 766 (1024)
.|+..+.||+|+||.||+|... .+|..||+|+++...... ....+.+.+|+++++++ +|++|+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3677889999999999999874 368899999986533222 23346788999999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~ 144 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-------------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 144 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCE
Confidence 99999999999999997543 377888999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
||+|||++....... ........|+..|+|||.+.+. .++.++||||||+++|||++|..||...............
T Consensus 145 kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~ 223 (290)
T cd05613 145 VLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR 223 (290)
T ss_pred EEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH
Confidence 999999997653322 1222235688999999998753 4678999999999999999999998643322211111111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP 967 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 967 (1024)
..... .+.+......+.+++.+||+.||++||
T Consensus 224 ~~~~~-----------~~~~~~~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 224 ILKSE-----------PPYPQEMSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred hhccC-----------CCCCccCCHHHHHHHHHHhcCCHHHhc
Confidence 11110 111222346788999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-32 Score=300.47 Aligned_cols=257 Identities=22% Similarity=0.234 Sum_probs=191.2
Q ss_pred CcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCHHHHh
Q 001706 703 GSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL 782 (1024)
Q Consensus 703 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 782 (1024)
++|.||.++...+++.||||++.... ......+.+.+|+++++.++||||+++++++.+.+..+++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44556666666689999999986542 23345678999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCC
Q 001706 783 HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862 (1024)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~ 862 (1024)
..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+..+...+.
T Consensus 91 ~~~~~-----------~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 91 KTHFP-----------EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred HHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccc
Confidence 86432 2478888999999999999999998 999999999999999999999999999876543222
Q ss_pred C-----ceecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH-Hhh---ccCC-
Q 001706 863 P-----HTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR-HYA---EEKP- 930 (1024)
Q Consensus 863 ~-----~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~---~~~~- 930 (1024)
. .......++..|+|||++.+. .++.++|||||||++|||++|..||.............. ... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence 1 112234577889999998763 588999999999999999999999976433221110000 000 0000
Q ss_pred ------chh----h----hccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 ------ITD----A----LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 ------~~~----~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
... . ...............++.+++.+||+.||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 0 0000111222334467889999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=283.82 Aligned_cols=265 Identities=18% Similarity=0.235 Sum_probs=213.9
Q ss_pred hCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-CC
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-EN 764 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 764 (1024)
.+++....+.+|.||.||.|.+... .+.|.||.++... ++-....+..|.-.+..+.|||+..+.+.+.+ ..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 3455667789999999999977543 3347777764432 23445778999999999999999999998754 56
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..+.+|.++.-|+|..|+...+... ....+.+.-.+...++.|++.|++|||.+ +|||.||.++|.++|+..
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~-----~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDD-----PSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCC-----CccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 7899999999999999999555322 22345577778889999999999999999 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHh-CCCCCCCCCCcchHHHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 923 (1024)
.|||+|=.+++.+.+.+..--.........||+||.+....|+.++|||||||+||||+| |+.|+..-++.++..++.+
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 999999999998876554433344456678999999999999999999999999999999 6778776666655544433
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
+.+...+.+++.+++.+|.-||..+|++||+++|++.-|.+.
T Consensus 514 --------------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 514 --------------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred --------------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 334455667889999999999999999999999999888654
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-32 Score=303.32 Aligned_cols=268 Identities=23% Similarity=0.302 Sum_probs=198.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN----- 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 764 (1024)
.++|+..+.||+|+||.||+|....+++.||||++...... ......+.+|+++++.++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 57899999999999999999999888999999988543221 122346778999999999999999998875433
Q ss_pred ---ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEEC
Q 001706 765 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 841 (1024)
Q Consensus 765 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 841 (1024)
..++|+||+. +++...+.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~~------------~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~ 149 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENPS------------VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILID 149 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhccc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 4699999997 46777666432 2489999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecccCCCC---------ceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 842 SEFKAKIADFGLAKMLAKQGEP---------HTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 842 ~~~~~kl~DFgla~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
+++.++|+|||+++........ ...+...+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+
T Consensus 150 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 150 NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999765432211 112234568889999987654 578999999999999999999999876
Q ss_pred CCCcchHHHHHHHhhccCC--------chhhhccCCCCc-------ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 912 DEHTSLAEWAWRHYAEEKP--------ITDALDKGIAEP-------CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..................+ +....+...... ........+.+++.+|++.||++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 230 KSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 5543333322221111000 000000000000 01112257889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-32 Score=303.86 Aligned_cols=268 Identities=23% Similarity=0.276 Sum_probs=200.6
Q ss_pred hhCCC-ccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHH-----------HHHHHHHHHHHHhccccCceeeEE
Q 001706 690 LSSLT-ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK-----------LEKEFIAEIEILGTIRHANIVKLW 757 (1024)
Q Consensus 690 ~~~~~-~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~l~ 757 (1024)
.++|. ..+.||+|+||.||+|.+...++.||||++......... ....+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 34564 357799999999999999888999999998543221100 113578999999999999999999
Q ss_pred EEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCC
Q 001706 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 837 (1024)
Q Consensus 758 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 837 (1024)
+++...+..++||||++ |+|.+++.... .+++.....++.|++.|++|||+. +++||||+|+|
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-------------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~n 149 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI-------------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPAN 149 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHH
Confidence 99999999999999997 68999886433 378899999999999999999998 99999999999
Q ss_pred EEECCCCcEEEeccccceecccCC------------CCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHh
Q 001706 838 ILLDSEFKAKIADFGLAKMLAKQG------------EPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVT 904 (1024)
Q Consensus 838 ill~~~~~~kl~DFgla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~t 904 (1024)
|+++.++.++++|||.+....... .........++..|+|||.+.+. .++.++||||+||++|||++
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t 229 (335)
T PTZ00024 150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229 (335)
T ss_pred eEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999999999999998664111 01112234467889999998764 46889999999999999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhccCC--chhhh--------ccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 905 GKEANYGDEHTSLAEWAWRHYAEEKP--ITDAL--------DKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 905 g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
|..||...+.......+......... ..... ..... ..........+.+++.+|++.+|++||+++|
T Consensus 230 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 309 (335)
T PTZ00024 230 GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE 309 (335)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence 99999776544333322221111000 00000 00000 0001122467889999999999999999999
Q ss_pred HHH
Q 001706 972 VLQ 974 (1024)
Q Consensus 972 vl~ 974 (1024)
++.
T Consensus 310 ~l~ 312 (335)
T PTZ00024 310 ALK 312 (335)
T ss_pred Hhc
Confidence 985
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.7e-32 Score=289.96 Aligned_cols=240 Identities=28% Similarity=0.356 Sum_probs=198.6
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|+||.||++....+++.||+|++...........+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999888999999998665443344567899999999999999999999999999999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+++.... .+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+....
T Consensus 81 ~~~l~~~~-------------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 144 (250)
T cd05123 81 FSHLSKEG-------------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELS 144 (250)
T ss_pred HHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecc
Confidence 99997543 378999999999999999999998 99999999999999999999999999998764
Q ss_pred cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC
Q 001706 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938 (1024)
Q Consensus 859 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1024)
... .......++..|+|||...+...+.++|+||||+++||+++|..||...+.......+.. ..
T Consensus 145 ~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~---------- 209 (250)
T cd05123 145 SEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK---DP---------- 209 (250)
T ss_pred cCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc---CC----------
Confidence 321 123345678899999999988899999999999999999999999976543222221111 10
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 939 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
...+...+..+.+++.+||..||++||++++
T Consensus 210 --~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 --LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1111222467889999999999999999955
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=296.36 Aligned_cols=254 Identities=26% Similarity=0.407 Sum_probs=196.4
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 768 (1024)
.++|+..+.||+|+||.||+|.+..+++.||||+++.... ......+.+|+.++.+. .||||+++++++.+....++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 4678889999999999999999988899999999864322 22345667788777776 49999999999999999999
Q ss_pred EEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEeCCCCCCCEEECCCCcEE
Q 001706 769 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
||||++ +++.++..... ..+++..+..++.|++.|++|||+ . +|+||||+|+||++++++.+|
T Consensus 92 v~e~~~-~~l~~l~~~~~------------~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~k 155 (296)
T cd06618 92 CMELMS-TCLDKLLKRIQ------------GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVK 155 (296)
T ss_pred EeeccC-cCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEE
Confidence 999985 57777765422 248899999999999999999996 4 899999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccCCC----CCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK----VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
|+|||++..+.... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+....
T Consensus 156 L~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~ 230 (296)
T cd06618 156 LCDFGISGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTK 230 (296)
T ss_pred ECccccchhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHH
Confidence 99999987653321 122345788999999987654 788999999999999999999998643211 111111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
......+ .... ......++.+++.+||+.||++||++.++++.
T Consensus 231 ~~~~~~~-------~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 231 ILQEEPP-------SLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HhcCCCC-------CCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111 0000 01234678999999999999999999999853
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-32 Score=303.30 Aligned_cols=271 Identities=25% Similarity=0.301 Sum_probs=208.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----ce
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-----SK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 766 (1024)
+|++.+.||.|++|.||+|....+++.||||++..... .....+.+.+|+++++.++||||+++++++.+.. ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 47788999999999999999988899999999865321 2334567999999999999999999999987765 78
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
|+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~-------------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~ 142 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ-------------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDL 142 (330)
T ss_pred EEEecchh-hhHHHHHhCCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 99999997 58988887533 488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCC-CceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHH
Q 001706 847 KIADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 924 (1024)
+|+|||.+........ ........++..|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.........+...
T Consensus 143 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 222 (330)
T cd07834 143 KICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEV 222 (330)
T ss_pred EEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHh
Confidence 9999999987644321 1123345678899999999888 8899999999999999999999999776543332222221
Q ss_pred hhccC----------Cchhhhcc---CCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 001706 925 YAEEK----------PITDALDK---GIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 980 (1024)
Q Consensus 925 ~~~~~----------~~~~~~~~---~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 980 (1024)
..... .....+.. ... .......+..+.+++.+||+.+|++||++.++++ .+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 11000 00000000 000 0001123467899999999999999999999997 365554
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=325.72 Aligned_cols=150 Identities=28% Similarity=0.400 Sum_probs=136.0
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+++|.+.++||+|+||.||+|.+..+++.||||+++............+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46788899999999999999999988999999999765444455567899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++.... .+++..++.++.||+.||+|||.. +|+||||||+|||++.++.+||+
T Consensus 83 mEy~~g~~L~~li~~~~-------------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~ 146 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-------------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLT 146 (669)
T ss_pred EeCCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEE
Confidence 99999999999997543 377888999999999999999998 99999999999999999999999
Q ss_pred ccccce
Q 001706 850 DFGLAK 855 (1024)
Q Consensus 850 DFgla~ 855 (1024)
|||+++
T Consensus 147 DFGls~ 152 (669)
T cd05610 147 DFGLSK 152 (669)
T ss_pred eCCCCc
Confidence 999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=301.04 Aligned_cols=262 Identities=23% Similarity=0.316 Sum_probs=197.6
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC-----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE----- 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 763 (1024)
+.++|+..+.||+|+||.||+|....+++.||+|++..... .....+.+.+|+.++++++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 45789999999999999999999888899999999865322 223346788999999999999999999987543
Q ss_pred -CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 764 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 764 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
...+++++++ +++|.+++... .+++..++.++.|+++|++|||+. +|+||||||+||+++.
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~ 155 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKCQ--------------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 155 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcC
Confidence 3467888887 78998887632 378999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
++.+||+|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+........
T Consensus 156 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~ 230 (345)
T cd07877 156 DCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 230 (345)
T ss_pred CCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999876422 1233567889999998866 56888999999999999999999998654433222211
Q ss_pred HHHhhccC-Cch---------hhhc--cCCCCcc----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEK-PIT---------DALD--KGIAEPC----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~-~~~---------~~~~--~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.+...... ... .... ....... .......+.+++.+|++.||++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 11110000 000 0000 0000000 0012457889999999999999999999985
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-32 Score=276.34 Aligned_cols=211 Identities=25% Similarity=0.385 Sum_probs=174.6
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCC----cEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-C
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAG----EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-E 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 763 (1024)
....|+....||+|.||.||+|....+. ..+|+|+++.+...+ .......+|+.+++.++|||++.+..++-. +
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 4567999999999999999999654332 269999997654322 223567899999999999999999988766 7
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
..+++++||.+ -+|...++-..... ...++...+..|+.||+.|+.|||+. =|+||||||.|||+..+
T Consensus 101 ~~v~l~fdYAE-hDL~~II~fHr~~~--------~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgd 168 (438)
T KOG0666|consen 101 KKVWLLFDYAE-HDLWHIIKFHRASK--------AKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGD 168 (438)
T ss_pred ceEEEEehhhh-hhHHHHHHHhccch--------hccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEecc
Confidence 88999999998 58888888665421 24688899999999999999999998 79999999999999888
Q ss_pred ----CcEEEeccccceecccCCCCc-eecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 844 ----FKAKIADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 844 ----~~~kl~DFgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
|.|||+|||+|+.+...-.+. .....+.|..|+|||.+.+. .|+++.||||.|||+.||+|-.+.|.+.
T Consensus 169 gperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 169 GPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred CCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 899999999999886543332 33456789999999998876 5899999999999999999998888764
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=298.62 Aligned_cols=263 Identities=27% Similarity=0.328 Sum_probs=199.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec-CCceE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-ENSKL 767 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~ 767 (1024)
+.++|+..+.||.|+||.||+|....+++.||||++..... .....+.+.+|+++++.++||||+++++++.. ....+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 45679999999999999999999998999999998854322 22335678899999999999999999998865 56789
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 847 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 847 (1024)
+|+||+ +++|.++++.. .+++.....++.|++.||+|||+. +|+||||+|+||+++.++.++
T Consensus 87 lv~e~~-~~~L~~~~~~~--------------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 87 FVTELL-GTDLHRLLTSR--------------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred EEeehh-ccCHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEE
Confidence 999998 57898888632 367788889999999999999998 999999999999999999999
Q ss_pred EeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh-
Q 001706 848 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY- 925 (1024)
Q Consensus 848 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~- 925 (1024)
|+|||.+..... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.+..
T Consensus 149 l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~ 223 (328)
T cd07856 149 ICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLG 223 (328)
T ss_pred eCccccccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999875422 1123457889999998766 568999999999999999999999987654322111111100
Q ss_pred ----------hccCCchhhhccCCCCccc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 926 ----------AEEKPITDALDKGIAEPCY-----LEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 926 ----------~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.......-..........+ ......+.+++.+|++.+|++||++.+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 224 TPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000000111 1123678999999999999999999999753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=294.77 Aligned_cols=263 Identities=28% Similarity=0.374 Sum_probs=202.6
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|+..+.||+|++|.||+|+...+++.||+|++.... ......+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 456678999999999999999889999999986543 2233346788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
++ ++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||
T Consensus 80 ~~-~~l~~~i~~~~------------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g 143 (282)
T cd07829 80 CD-MDLKKYLDKRP------------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFG 143 (282)
T ss_pred cC-cCHHHHHHhhc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCC
Confidence 98 69999998643 2488999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCC-
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP- 930 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 930 (1024)
.++....... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.....................
T Consensus 144 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (282)
T cd07829 144 LARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEE 221 (282)
T ss_pred cccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHH
Confidence 9987643221 22234567789999998776 8899999999999999999999888765543322222211100000
Q ss_pred -------c---hhhhccC---CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 931 -------I---TDALDKG---IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 931 -------~---~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. ....... ............+.+++.+||+.||++||++.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0000000 000001112467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=298.91 Aligned_cols=267 Identities=21% Similarity=0.307 Sum_probs=201.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN---- 764 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 764 (1024)
+.++|++.+.||+|+||.||+|....++..||||++..... .....+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 45679999999999999999999988999999999854322 2334567889999999999999999999886543
Q ss_pred --ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 765 --SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 765 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
..++||||+ +++|.+++.. ..+++..++.++.|++.|++|||+. +|+||||||+||+++.
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~--------------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~ 153 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH--------------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNE 153 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 358999999 6899888763 2378999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
++.++++|||++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|..||.+.+........
T Consensus 154 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~ 228 (343)
T cd07880 154 DCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEI 228 (343)
T ss_pred CCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999998765321 123457889999998876 45889999999999999999999999765432211111
Q ss_pred HHHhhcc----------CCchhhhc--cCCCC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 001706 922 WRHYAEE----------KPITDALD--KGIAE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 979 (1024)
Q Consensus 922 ~~~~~~~----------~~~~~~~~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 979 (1024)
....... ........ ..... .........+.+++.+|++.||++||++.++++ .++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 229 MKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 1100000 00000000 00000 001122356889999999999999999999983 44444
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-32 Score=292.00 Aligned_cols=254 Identities=26% Similarity=0.311 Sum_probs=199.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
+|...+.||+|+||.||++.+...+..+++|+++.... ........+.+|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47778899999999999999877777777777653221 1122345677899999999999999999999988899999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|||+++++|.+++..... ....+++..++.++.|++.|++|||+. +++|+||+|+||+++. +.++++
T Consensus 81 ~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~ 147 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH---------TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIG 147 (260)
T ss_pred EEeCCCCCHHHHHHHHhh---------cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeec
Confidence 999999999999875322 124589999999999999999999998 9999999999999975 579999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||.++...... .......+++.|+|||...+..++.++|+||||+++|+|++|..||....... ...... ..
T Consensus 148 d~g~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~---~~~~~~-~~- 220 (260)
T cd08222 148 DFGVSRLLMGSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS---VVLRIV-EG- 220 (260)
T ss_pred ccCceeecCCCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHH-cC-
Confidence 999998764322 12233567889999999988889999999999999999999999986543221 111111 11
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.....+...+.++.+++.+||+.+|++||++.|+++
T Consensus 221 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 221 ---------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 011122344578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=302.50 Aligned_cols=267 Identities=23% Similarity=0.304 Sum_probs=199.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC------
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------ 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 763 (1024)
..+|...+.||+|+||.||+|.+..+++.||||++..... .......+.+|+++++.++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3578888999999999999999988899999999864322 223345688999999999999999999988654
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
..+++|+||+. .+|.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~---------------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMG---------------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNED 153 (342)
T ss_pred ceEEEEecccc-cCHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 24689999996 47766542 2378899999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
+.+||+|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+........+
T Consensus 154 ~~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~ 228 (342)
T cd07879 154 CELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 228 (342)
T ss_pred CCEEEeeCCCCcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999876422 1223467889999999876 468899999999999999999999998654322222111
Q ss_pred HHhhccC----------Cchhhhcc--CCCCc----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcCC
Q 001706 923 RHYAEEK----------PITDALDK--GIAEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCCP 981 (1024)
Q Consensus 923 ~~~~~~~----------~~~~~~~~--~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 981 (1024)
....... ........ ..... ........+.+++.+||+.||++||+++|++. .+++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 1100000 00000000 00000 00112356889999999999999999999984 4666654
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-33 Score=296.48 Aligned_cols=247 Identities=23% Similarity=0.288 Sum_probs=208.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
++++++...+|-|+||.|-.+........+|+|++++....+.+..+.+..|-.+|...+.|.||++|..|.+.+++|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 55677788899999999999988766666999999888777778888999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||-|-||.+...++.++. ++..+...++..+.+|++|||++ +||+|||||+|.++|.+|-+||.
T Consensus 499 mEaClGGElWTiLrdRg~-------------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLV 562 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS-------------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLV 562 (732)
T ss_pred HHhhcCchhhhhhhhcCC-------------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEe
Confidence 999999999999997654 88888999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 929 (1024)
|||+|+.+..+... -.++|||.|.|||++.+..++.++|.||+|+++||+++|.+||.+.++-.....+.+.....
T Consensus 563 DFGFAKki~~g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i- 638 (732)
T KOG0614|consen 563 DFGFAKKIGSGRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI- 638 (732)
T ss_pred ehhhHHHhccCCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-
Confidence 99999998654433 34689999999999999999999999999999999999999999888766555554433221
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC
Q 001706 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS 968 (1024)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 968 (1024)
..+........++|++.++.+|.+|..
T Consensus 639 ------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 ------------EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ------------hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 112222345556666666666766653
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=298.32 Aligned_cols=265 Identities=25% Similarity=0.291 Sum_probs=195.7
Q ss_pred CCCccceeeecCcEEEEEEEEcCC--CcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec----CC
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGA--GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS----EN 764 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~ 764 (1024)
+|+..+.||+|+||.||++..... +..||+|++..... .....+.+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 367788999999999999999877 88999999854322 223356788999999999 59999999987532 24
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..++++||+. ++|.+++.... .+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~ 142 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ-------------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADC 142 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCC
Confidence 5788999986 68998886433 388999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecccCCCC--ceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 845 KAKIADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
.+||+|||+++.+...... .......||..|+|||++.+ ..++.++||||+||++|+|++|..||...+........
T Consensus 143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~ 222 (332)
T cd07857 143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQI 222 (332)
T ss_pred CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHH
Confidence 9999999999866432211 11233568999999998765 46899999999999999999999998765432222211
Q ss_pred HHHhh-----------ccC--CchhhhccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYA-----------EEK--PITDALDKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~-----------~~~--~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... ... ........... ..........+.+++.+|++.||++||++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11100 000 00000000000 0000112467889999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-32 Score=303.65 Aligned_cols=260 Identities=25% Similarity=0.330 Sum_probs=200.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc---
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS--- 765 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--- 765 (1024)
+.++|+..+.||+|++|.||+|....+++.||||++..... .....+.+.+|+.+++.++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 45678899999999999999999988899999998854322 22334667889999999999999999887765544
Q ss_pred ---eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 766 ---KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 766 ---~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
.++|+||+ +++|.+++.. ..+++..++.++.|++.|++|||+. +|+||||+|+||+++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~--------------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~ 153 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC--------------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNE 153 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC
Confidence 89999999 5799998874 2488999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecccCCCCceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHH
Q 001706 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921 (1024)
Q Consensus 843 ~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~ 921 (1024)
++.++|+|||++...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 154 ~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i 228 (343)
T cd07851 154 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRI 228 (343)
T ss_pred CCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999999999999765322 233467889999998865 36788999999999999999999999765443222221
Q ss_pred HHHhhccCCchhhh------------c---cCCCCc---ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 922 WRHYAEEKPITDAL------------D---KGIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 922 ~~~~~~~~~~~~~~------------~---~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... .+..... . ...... .....+..+.+++.+|++.||++||++.|+++
T Consensus 229 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 229 MNLVG--TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHhcC--CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 11110 0000000 0 000000 00112467899999999999999999999975
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-32 Score=290.56 Aligned_cols=246 Identities=26% Similarity=0.342 Sum_probs=200.5
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCC
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 775 (1024)
.+++|+|.||+||-|+++.+|+.||||++.+.+. ....+..+.+|+.|++.+.||.||.+-..|+..+..+.|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrF-p~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRF-PTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccC-CCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 4789999999999999999999999999976554 344458899999999999999999999999999999999999975
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC---CcEEEeccc
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE---FKAKIADFG 852 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DFg 852 (1024)
.-|.-.+...+ ..+++.....++.||+.||.|||.+ +|+|+||||+|||+.+. -.+||||||
T Consensus 648 DMLEMILSsEk------------gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 648 DMLEMILSSEK------------GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred hHHHHHHHhhc------------ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccc
Confidence 44444444333 3588888889999999999999998 99999999999999754 469999999
Q ss_pred cceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCch
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1024)
+|+++.+.. .....+||+.|.|||+++...|...-|+||.|||+|--++|..||..+++.. +.+.. .
T Consensus 713 fARiIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQN--------A 779 (888)
T KOG4236|consen 713 FARIIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQN--------A 779 (888)
T ss_pred ceeecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhc--------c
Confidence 999985543 3345789999999999999999999999999999999999999997654322 11111 0
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
..+. ....+.+.....+++|...++..-.+|-+.++.+
T Consensus 780 aFMy---Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 780 AFMY---PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cccc---CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1111 1122345557788999999999999998887754
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=300.74 Aligned_cols=264 Identities=23% Similarity=0.314 Sum_probs=194.9
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC------
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------ 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 763 (1024)
..+|+..+.||.|+||.||+|....++..||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 3578889999999999999999998999999998854322 3346788999999999999999999776543
Q ss_pred --------CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCC
Q 001706 764 --------NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835 (1024)
Q Consensus 764 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 835 (1024)
...++||||++ ++|.+++.. ..+++..++.++.|++.|++|||+. +|+||||||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--------------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp 142 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ--------------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKP 142 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc--------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCH
Confidence 35789999997 689888753 2378899999999999999999998 999999999
Q ss_pred CCEEECC-CCcEEEeccccceecccCCCC-ceecccccCcccCchhhccC-CCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 836 SNILLDS-EFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 836 ~Nill~~-~~~~kl~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
+||+++. ++.++++|||.++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 143 ~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 143 ANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred HHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999985 567899999999765322111 11122357889999997654 56788999999999999999999999765
Q ss_pred CCcchHHHHHHHhhccC---------Cchhhhc-cCCCCc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 913 EHTSLAEWAWRHYAEEK---------PITDALD-KGIAEP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
................. ....... ...... .......++.+++.+||+.||++||++.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 223 HELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 43222211111100000 0000000 000000 01122357889999999999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=245.97 Aligned_cols=202 Identities=26% Similarity=0.453 Sum_probs=173.4
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.|...++||+|.||+||+|+...+++.||+|+++.+.. ++.......+|+-+++.++|.|||++++....++...+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46667899999999999999999999999999976543 23334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
||. .+|..|...-.. .++.+..+.++.|+++|+.++|++ .+.|||+||.|.+++.+|+.|++||
T Consensus 82 ~cd-qdlkkyfdslng------------~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladf 145 (292)
T KOG0662|consen 82 FCD-QDLKKYFDSLNG------------DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADF 145 (292)
T ss_pred Hhh-HHHHHHHHhcCC------------cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEeccc
Confidence 995 788888876543 478889999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCCc-eecccccCcccCchhhccCCC-CCCCCcchhHHHHHHHHHhCCCCCCCCC
Q 001706 852 GLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDE 913 (1024)
Q Consensus 852 gla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGvil~el~tg~~p~~~~~ 913 (1024)
|+|+.++ .+. ..+....|..|.+|.++.+.+ |+...|+||.||++.|+...+.|...+.
T Consensus 146 glarafg---ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~ 206 (292)
T KOG0662|consen 146 GLARAFG---IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_pred chhhhcC---CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence 9998763 222 344567889999999998875 7889999999999999999776655443
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-32 Score=279.02 Aligned_cols=260 Identities=22% Similarity=0.257 Sum_probs=204.1
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-c-C----ceeeEEEEEec
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-H-A----NIVKLWCCISS 762 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-p----niv~l~~~~~~ 762 (1024)
+..+|++...+|+|.||.|-++.+...+..||||+++... ...+..+-|+++++++. + | -+|.+.+||.-
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 3678999999999999999999998889999999986543 34567788999999993 2 2 46777788999
Q ss_pred CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC
Q 001706 763 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842 (1024)
Q Consensus 763 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 842 (1024)
.++.++|+|.+ |-|+++++....- .+++..+++.|+.|++++++|||+. +++|-||||+||++.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y-----------~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvs 227 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNY-----------IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVS 227 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCc-----------cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEec
Confidence 99999999999 5699999997553 4688899999999999999999999 9999999999999942
Q ss_pred --------------------CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHH
Q 001706 843 --------------------EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902 (1024)
Q Consensus 843 --------------------~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el 902 (1024)
...|+++|||.|++.... .+..+.|..|.|||++.+-.++.++||||+||||+|+
T Consensus 228 s~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 228 SEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred cceEEEeccCCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 235899999999874322 2456789999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccC-----------------C--------C--------CcccHHHHH
Q 001706 903 VTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG-----------------I--------A--------EPCYLEEMT 949 (1024)
Q Consensus 903 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~--------~--------~~~~~~~~~ 949 (1024)
+||...|+..+..+... .++.+.+.-+ ..++... . . ......+..
T Consensus 303 ytG~~LFqtHen~EHLa-MMerIlGp~P-~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~ 380 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLA-MMERILGPIP-SRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHV 380 (415)
T ss_pred eccceecccCCcHHHHH-HHHHhhCCCc-HHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHh
Confidence 99999998776444221 1111111110 0000000 0 0 011233456
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 950 TVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 950 ~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.+++|+++|+..||.+|+|++|+++
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhc
Confidence 7999999999999999999999875
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=287.86 Aligned_cols=209 Identities=22% Similarity=0.321 Sum_probs=179.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
-|..++.||-|+||+|.++.-.++...||.|.+++...........++.|-.||..-..+.||++|-.|+|.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 46677889999999999999888888999999876655555666789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++||++-.+|-..+ .+.+..++.++..+..|+++.|.. |+|||||||+|||||.||++||.||
T Consensus 710 YIPGGDmMSLLIrmg-------------IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG-------------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred ccCCccHHHHHHHhc-------------cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeec
Confidence 999999999987654 478888888999999999999998 9999999999999999999999999
Q ss_pred ccceec---------ccCCCCc-------------------------------eecccccCcccCchhhccCCCCCCCCc
Q 001706 852 GLAKML---------AKQGEPH-------------------------------TMSAVAGSFGYFAPEYAYTTKVNEKID 891 (1024)
Q Consensus 852 gla~~~---------~~~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sD 891 (1024)
|++.-+ ..++..+ ..-..+||+.|+|||++....|+..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 998533 2111100 011235999999999999999999999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCCcc
Q 001706 892 IYSFGVVLLELVTGKEANYGDEHTS 916 (1024)
Q Consensus 892 vwslGvil~el~tg~~p~~~~~~~~ 916 (1024)
.||.|||||||+.|+.||..+....
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCc
Confidence 9999999999999999998765443
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=280.24 Aligned_cols=262 Identities=26% Similarity=0.343 Sum_probs=206.3
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHH----HHHHHHHHHHHhccccCceeeEEEEEec-CC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL----EKEFIAEIEILGTIRHANIVKLWCCISS-EN 764 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 764 (1024)
-++|-..+++|+|||+.||+|.+....+.||||+-.....+.++. .+...+|.+|.+.+.||.||++|+++.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 456777899999999999999998889999999865444443322 3567899999999999999999999865 56
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE- 843 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~- 843 (1024)
..+-|+|||+|.+|+-|++..+. +++..++.|+.||..||.||.+. .++|+|-||||.|||+-..
T Consensus 542 sFCTVLEYceGNDLDFYLKQhkl-------------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gt 607 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKL-------------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGT 607 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhh-------------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCc
Confidence 78899999999999999987653 88999999999999999999998 7899999999999999543
Q ss_pred --CcEEEeccccceecccCCCCc-----eecccccCcccCchhhccC----CCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 844 --FKAKIADFGLAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYT----TKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 844 --~~~kl~DFgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
|.+||.|||+++.+.++.... ..+...||+.|++||.+.- .+.+.|.||||.|||+|.++.|+.||..+
T Consensus 608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 789999999999886654332 2345679999999997653 35788999999999999999999999754
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.... .+.+...+....+-.+ +..+....+..++|++|+.+--+.|....++..
T Consensus 688 qsQQ-------dILqeNTIlkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 688 QSQQ-------DILQENTILKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhHH-------HHHhhhchhcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 3221 1222222222221111 222334467788999999999999988887753
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-33 Score=271.39 Aligned_cols=259 Identities=27% Similarity=0.372 Sum_probs=199.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.++....||.|+||+|+|-.++..|+..|||+++.... ....+++..|.+...+- ++||||++||.+..++..++.|
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM 142 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM 142 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence 34455679999999999999999999999999965443 45567888888877665 7999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|.|. .|++.+-+..-. .....+++...-.|+.....||.||-+. ..|+|||+||+|||++..|.+|+||
T Consensus 143 ELMd-~SlDklYk~vy~--------vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCD 211 (361)
T KOG1006|consen 143 ELMD-ISLDKLYKRVYS--------VQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCD 211 (361)
T ss_pred HHHh-hhHHHHHHHHHH--------HHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeec
Confidence 9996 677655432110 1124577777778888899999999875 3899999999999999999999999
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCC--CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhcc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 928 (1024)
||.+-.+. ++...+.-.|-..|||||.+... .|+-+|||||+|++|||+.||..|+.+-+ +..+.+.......
T Consensus 212 FGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--svfeql~~Vv~gd 286 (361)
T KOG1006|consen 212 FGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--SVFEQLCQVVIGD 286 (361)
T ss_pred ccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH--HHHHHHHHHHcCC
Confidence 99987653 23334455677889999988743 48889999999999999999999986432 2333343333333
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.++... .....+....+.+++.-|+.+|-..||.+.++.+
T Consensus 287 pp~l~~------~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 287 PPILLF------DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCeecC------cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 332211 1112345678999999999999999999999875
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=293.44 Aligned_cols=241 Identities=23% Similarity=0.230 Sum_probs=196.8
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 767 (1024)
+.++|.....+|.|+|+.|-.+.+..+++..+||++... ..+-.+|+.++... +||||+++.+.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-------~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-------ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-------ccccccccchhhhhcCCCcceeecceecCCceee
Confidence 345677777799999999999999999999999998544 23455677777777 6999999999999999999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE-CCCCcE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL-DSEFKA 846 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~ 846 (1024)
+|||.+.|+-+.+.+...+. .. ..+..|+.+++.|+.|||++ |+|||||||+|||+ ++++++
T Consensus 393 ~v~e~l~g~ell~ri~~~~~-------------~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~l 455 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE-------------FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHL 455 (612)
T ss_pred eeehhccccHHHHHHHhcch-------------hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcE
Confidence 99999999988887775442 22 67778999999999999998 99999999999999 588999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
+|+|||.++..... ....+-|..|.|||+.....|++++|+||+|++||+|++|+.||...... ..+.....
T Consensus 456 rltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~ 527 (612)
T KOG0603|consen 456 RLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQ 527 (612)
T ss_pred EEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhc
Confidence 99999999875332 33456688999999999999999999999999999999999999765433 11111111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. .......+....+|+.+|++.||.+||++.++..
T Consensus 528 ~-------------~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 528 M-------------PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred C-------------CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1 1111334567889999999999999999999875
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=277.86 Aligned_cols=222 Identities=21% Similarity=0.140 Sum_probs=178.1
Q ss_pred cCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCHHHH
Q 001706 702 GGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRW 781 (1024)
Q Consensus 702 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 781 (1024)
|.+|.||++.+..+++.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999985532 233444555556799999999999999999999999999999999
Q ss_pred hccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCC
Q 001706 782 LHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861 (1024)
Q Consensus 782 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~ 861 (1024)
+.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+......
T Consensus 76 l~~~~-------------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~- 138 (237)
T cd05576 76 ISKFL-------------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS- 138 (237)
T ss_pred HHHhc-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-
Confidence 87543 378999999999999999999998 9999999999999999999999999987665322
Q ss_pred CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCC
Q 001706 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAE 941 (1024)
Q Consensus 862 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1024)
.....++..|+|||...+..++.++||||+|+++|||++|..|+...... ..... ..
T Consensus 139 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------~~~~~----------~~ 195 (237)
T cd05576 139 ----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------INTHT----------TL 195 (237)
T ss_pred ----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------ccccc----------cc
Confidence 12234577899999998888999999999999999999999876432110 00000 00
Q ss_pred cccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001706 942 PCYLEEMTTVYRLALICTSTLPSSRPSMKE 971 (1024)
Q Consensus 942 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 971 (1024)
..+......+.+++.+|++.||++||++.+
T Consensus 196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 196 NIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 111223467889999999999999999743
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-32 Score=268.50 Aligned_cols=271 Identities=22% Similarity=0.335 Sum_probs=203.1
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEec----
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS---- 762 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~---- 762 (1024)
.+....|....+||+|.||.||+|+...+++.||+|++..+.... ..-....+|++++..++|+|++.+++.|..
T Consensus 13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lkHenv~nliEic~tk~Tp 91 (376)
T KOG0669|consen 13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATP 91 (376)
T ss_pred eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence 445667888899999999999999999999999999765432211 123457889999999999999999876632
Q ss_pred ----CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 763 ----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 763 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
....|+||++|+ -+|.-.+.... ..++..++.+++.++..||.|+|.. .|+|||+||.||
T Consensus 92 ~~r~r~t~ylVf~~ce-hDLaGlLsn~~------------vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNv 155 (376)
T KOG0669|consen 92 TNRDRATFYLVFDFCE-HDLAGLLSNRK------------VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANV 155 (376)
T ss_pred cccccceeeeeHHHhh-hhHHHHhcCcc------------ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhE
Confidence 345899999997 58888887654 3588899999999999999999998 999999999999
Q ss_pred EECCCCcEEEeccccceecccCC--CCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCc
Q 001706 839 LLDSEFKAKIADFGLAKMLAKQG--EPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915 (1024)
Q Consensus 839 ll~~~~~~kl~DFgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~ 915 (1024)
|++.+|.+||+|||+|+.+.... .....+..+.|..|++||.+.+. .|+++.|||+.|||+.||+||.+.+.++...
T Consensus 156 LIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq 235 (376)
T KOG0669|consen 156 LITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ 235 (376)
T ss_pred EEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH
Confidence 99999999999999997664322 22234556679999999988765 6899999999999999999999998876654
Q ss_pred chHHHHHHHhhc----cC------CchhhhccC-CCCcc---cHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 916 SLAEWAWRHYAE----EK------PITDALDKG-IAEPC---YLEE------MTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 916 ~~~~~~~~~~~~----~~------~~~~~~~~~-~~~~~---~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.....+...... .+ ++...+... +.... ..+. ..+..+++..++..||.+|+++++++.
T Consensus 236 qql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 236 QQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 433333221100 00 011111000 10000 0111 136788999999999999999999985
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-30 Score=250.03 Aligned_cols=198 Identities=24% Similarity=0.326 Sum_probs=170.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecC--Cce
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSE--NSK 766 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~ 766 (1024)
.++|++.+++|+|.|+.||.|....+.+.++||+++... .+.+.+|+++++.+. ||||+++++.+.++ ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 568999999999999999999988889999999996543 478999999999996 99999999998775 567
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-Cc
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FK 845 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~ 845 (1024)
.+|+||+.+.+...... .++...+...+.+++.||.|+|+. ||.|||+||.||++|.. -.
T Consensus 111 aLiFE~v~n~Dfk~ly~----------------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rk 171 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYP----------------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRK 171 (338)
T ss_pred hhHhhhhccccHHHHhh----------------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhce
Confidence 89999999988766543 467778889999999999999999 99999999999999976 67
Q ss_pred EEEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCc
Q 001706 846 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~ 915 (1024)
.+++|+|+|.++.++.+.. ....+..|.-||.+... .|+..-|+|||||++.+|+..+.||..+.+.
T Consensus 172 LrlIDWGLAEFYHp~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN 239 (338)
T KOG0668|consen 172 LRLIDWGLAEFYHPGKEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 239 (338)
T ss_pred eeeeecchHhhcCCCceee---eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence 9999999999987654433 34567788999988764 5788999999999999999999999765444
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=269.06 Aligned_cols=239 Identities=32% Similarity=0.436 Sum_probs=194.2
Q ss_pred CcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCHHHHh
Q 001706 703 GSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL 782 (1024)
Q Consensus 703 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 782 (1024)
+||.||+|....+++.||+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999988899999999865432211 578999999999999999999999999889999999999999999998
Q ss_pred ccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCC
Q 001706 783 HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862 (1024)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~ 862 (1024)
.... .+++..++.++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 79 ~~~~-------------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~- 141 (244)
T smart00220 79 KKRG-------------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG- 141 (244)
T ss_pred Hhcc-------------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-
Confidence 7543 178899999999999999999998 99999999999999999999999999998764332
Q ss_pred CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC-CCCcchHHHHHHHhhccCCchhhhccCCCC
Q 001706 863 PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG-DEHTSLAEWAWRHYAEEKPITDALDKGIAE 941 (1024)
Q Consensus 863 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1024)
......+++.|++||...+..++.++||||+|+++|++++|..||.. .+.....+... ...... .
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~----~~~~~~--------~ 207 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG----KPKPPF--------P 207 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh----ccCCCC--------c
Confidence 33345688899999999988899999999999999999999999876 33222222111 110000 0
Q ss_pred cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 942 PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 942 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
......+.++.+++.+||..+|++||++.++++
T Consensus 208 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 208 PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000003468899999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=285.98 Aligned_cols=253 Identities=21% Similarity=0.299 Sum_probs=206.0
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEec-----C
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS-----E 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-----~ 763 (1024)
.+.|.+.+.||.|.+|.||+++...+++.+|||+...... ..+++..|.++++.. .|||++.+++++.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 4567788999999999999999999999999999865443 345677889999988 69999999998853 5
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
+..+||||||.+||..|+++.-.. ..+.|..+.-|++.++.|+.+||.. .++|||||-.|||++.+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g-----------~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKG-----------NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTEN 159 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcc-----------cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEecc
Confidence 688999999999999999997663 5699999999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCC-----CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~ 918 (1024)
+.||++|||.+..+.. .........|||.|||||++... .|+.++|+||+|++..||.-|.+|+.+.-+..
T Consensus 160 ~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-- 235 (953)
T KOG0587|consen 160 AEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-- 235 (953)
T ss_pred CcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--
Confidence 9999999999977633 23334457899999999998643 57779999999999999999999876543210
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..+ .+.....+. ...+....+++.++|..|+.+|.++||++.++++
T Consensus 236 ----aLF----~IpRNPPPk--Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 ----ALF----LIPRNPPPK--LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ----hhc----cCCCCCCcc--ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 000 011111111 1235667789999999999999999999998874
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=294.24 Aligned_cols=271 Identities=17% Similarity=0.170 Sum_probs=170.6
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCC----CcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEE-----
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGA----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCC----- 759 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~----- 759 (1024)
..++|...+.||+|+||.||+|.+..+ +..||||++...... +....| .++...+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 356899999999999999999999888 899999987532211 111111 1111112222222111
Q ss_pred -EecCCceEEEEeccCCCCHHHHhccCcccccc-----C-CCCc-ccccCChHHHHHHHHHHHhhhccccccCCCceEeC
Q 001706 760 -ISSENSKLLVYEYMENQSLDRWLHGRKRSLVS-----G-SSSV-HQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 831 (1024)
Q Consensus 760 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~-~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 831 (1024)
.......++||||+++++|.++++........ + .... .........+..++.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566789999999999999999754321000 0 0000 001122345668999999999999998 99999
Q ss_pred CCCCCCEEECC-CCcEEEeccccceecccCCCCceecccccCcccCchhhccCC----------------------CCCC
Q 001706 832 DVKSSNILLDS-EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT----------------------KVNE 888 (1024)
Q Consensus 832 Dlk~~Nill~~-~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ 888 (1024)
||||+|||++. ++.+||+|||+|+.+... .........+|+.|||||.+... .++.
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 99999999986 589999999999865432 22233456789999999965432 2345
Q ss_pred CCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhh---hccCCCC------cccHHHHHHHHHHHHHcc
Q 001706 889 KIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA---LDKGIAE------PCYLEEMTTVYRLALICT 959 (1024)
Q Consensus 889 ~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~l~~li~~cl 959 (1024)
++||||+||++|||+++..++... .................+ ....... ...........+++.+|+
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSN----LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchH----HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 679999999999999976654321 111100000000000000 0000000 000001234558999999
Q ss_pred CCCCCCCCCHHHHHH
Q 001706 960 STLPSSRPSMKEVLQ 974 (1024)
Q Consensus 960 ~~dP~~RPs~~evl~ 974 (1024)
+.||++|||++|+++
T Consensus 435 ~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 435 RFKGRQRISAKAALA 449 (566)
T ss_pred cCCcccCCCHHHHhC
Confidence 999999999999986
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=241.23 Aligned_cols=204 Identities=25% Similarity=0.394 Sum_probs=170.0
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 769 (1024)
+.+.....||+|++|.|-+-++..+|...|||+++... +.+..++..+|+.+..+. .+|.+|.|||...+.+..++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 34455677999999999999999999999999996543 355567888999988776 799999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||.|. .||+.+-.+.-+ ....+++...-+||..|..||.|||++. .++|||+||+|||++.+|.||+|
T Consensus 124 ME~M~-tSldkfy~~v~~---------~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 124 MELMD-TSLDKFYRKVLK---------KGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred HHHhh-hhHHHHHHHHHh---------cCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEc
Confidence 99996 788877664322 1245888888899999999999999874 89999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhccC----CCCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT----TKVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
|||.+-.+.+ +...+...|-..|||||.+.. ..|+-++||||+|+++.||.+++.||..
T Consensus 192 DFGIsG~L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 192 DFGISGYLVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred ccccceeehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 9999987633 222333456678999998764 3688899999999999999999999853
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=253.76 Aligned_cols=266 Identities=25% Similarity=0.317 Sum_probs=201.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC-----ce
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-----SK 766 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 766 (1024)
+.+..+.||-|+||.||.+++..+|+.||+|++.... .+-...+.+.+|++++...+|.|++..++..+-.. ..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3445688999999999999999999999999985432 23344678999999999999999999887765432 45
Q ss_pred EEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcE
Q 001706 767 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846 (1024)
Q Consensus 767 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 846 (1024)
|.|+|.|. .+|++.+-.. +.++-..+.-+.+||++||+|||+. +|.||||||.|.+++++...
T Consensus 133 YV~TELmQ-SDLHKIIVSP-------------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvL 195 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSP-------------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCIL 195 (449)
T ss_pred HHHHHHHH-hhhhheeccC-------------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceE
Confidence 78899986 6787776543 3477788889999999999999998 99999999999999999999
Q ss_pred EEeccccceecccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
||||||+|+.-.. ++...++....|..|+|||.+++. .|+.+.||||.||++.|++.++..|....+....+.+....
T Consensus 196 KICDFGLARvee~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLL 274 (449)
T KOG0664|consen 196 KICDFGLARTWDQ-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLL 274 (449)
T ss_pred Eecccccccccch-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHh
Confidence 9999999987533 455567777889999999999876 58999999999999999999998887655544333332211
Q ss_pred ----------hccCCchhhhccCCCCc---------ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 926 ----------AEEKPITDALDKGIAEP---------CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 926 ----------~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
..+..-..++..+...+ .+...-.+-..+...++..||.+|.+..+.+...
T Consensus 275 GTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 275 GTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred CCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 01111111111111110 0112224556788889999999999999987654
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=279.79 Aligned_cols=272 Identities=18% Similarity=0.185 Sum_probs=183.5
Q ss_pred hhCCCccceeeecCcEEEEEEEEc----------------CCCcEEEEEEeccchhhhH-----------HHHHHHHHHH
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDIN----------------GAGEFVAVKRIWNNRKLNQ-----------KLEKEFIAEI 742 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~ 742 (1024)
.++|.+.++||+|+||.||+|... ..++.||||++........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999642 2356799999864322110 0122344577
Q ss_pred HHHhccccCce-----eeEEEEEec--------CCceEEEEeccCCCCHHHHhccCccccc-----------cCCCCccc
Q 001706 743 EILGTIRHANI-----VKLWCCISS--------ENSKLLVYEYMENQSLDRWLHGRKRSLV-----------SGSSSVHQ 798 (1024)
Q Consensus 743 ~~l~~l~hpni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~~~-----------~~~~~~~~ 798 (1024)
.++.+++|.++ ++++++|.. .+..++||||+++++|.++++....... ........
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777866544 667777643 3568999999999999999986432110 00011122
Q ss_pred ccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCch
Q 001706 799 HVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878 (1024)
Q Consensus 799 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aP 878 (1024)
..++|..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ........+|+.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeCh
Confidence 3468889999999999999999998 99999999999999999999999999997653321 1111223357899999
Q ss_pred hhccCCCC----------------------CCCCcchhHHHHHHHHHhCCC-CCCCCCCcchH-------HHHHHHhhcc
Q 001706 879 EYAYTTKV----------------------NEKIDIYSFGVVLLELVTGKE-ANYGDEHTSLA-------EWAWRHYAEE 928 (1024)
Q Consensus 879 E~~~~~~~----------------------~~~sDvwslGvil~el~tg~~-p~~~~~~~~~~-------~~~~~~~~~~ 928 (1024)
|.+..... ..+.||||+||++|||++|.. |+......... ...|+.+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98764321 134799999999999999886 44321111000 0011111110
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCC---CCCCCHHHHHH
Q 001706 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLP---SSRPSMKEVLQ 974 (1024)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 974 (1024)
...............+++.+++..+| .+|+|++|+++
T Consensus 460 ---------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 ---------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ---------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111122334678889999999876 68999999875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=284.22 Aligned_cols=245 Identities=25% Similarity=0.357 Sum_probs=186.3
Q ss_pred CccceeeecCcEE-EEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEEe
Q 001706 694 TESNLIGSGGSGQ-VYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 694 ~~~~~ig~G~~g~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
...+++|.|+.|+ ||+|.. .++.||||++-. ...+...+|+..++.- +|||||++++.-.++...|+..|
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred ccHHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 3346789999985 899998 588999998843 2246788999999988 69999999999889999999999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC---C--CcE
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---E--FKA 846 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~ 846 (1024)
.|. .+|.+++...... .....-...+.+..|++.|+++||+. +||||||||.|||++. + ..+
T Consensus 584 LC~-~sL~dlie~~~~d---------~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra 650 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLD---------VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRA 650 (903)
T ss_pred Hhh-hhHHHHHhccccc---------hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeE
Confidence 996 8999999975110 00111134568899999999999998 9999999999999976 3 468
Q ss_pred EEeccccceecccCCCCc-eecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC-CCCCCCCCCcchHHHHHHH
Q 001706 847 KIADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG-KEANYGDEHTSLAEWAWRH 924 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~ 924 (1024)
+|+|||+++....+.... ......||.+|+|||++....-+.++||||+||++|+.++| .+||...-..+ ..
T Consensus 651 ~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~------~N 724 (903)
T KOG1027|consen 651 KISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ------AN 724 (903)
T ss_pred EecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh------hh
Confidence 999999999886554332 24556799999999999999999999999999999999998 56765421110 01
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 925 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
+..+..-.. ......++ +..++|.+|++.||..||++.+|+
T Consensus 725 Il~~~~~L~------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 725 ILTGNYTLV------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred hhcCcccee------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 111110000 00111112 678999999999999999999996
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=270.09 Aligned_cols=201 Identities=27% Similarity=0.378 Sum_probs=177.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHH-----HHHHHHHHHHHhccc---cCceeeEEEEEe
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL-----EKEFIAEIEILGTIR---HANIVKLWCCIS 761 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~---hpniv~l~~~~~ 761 (1024)
..+|+..+.+|+|+||.|+.|.++.+...|+||.+.+++..-+.. ...+..|+.||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 456899999999999999999999988899999998776543322 235889999999997 999999999999
Q ss_pred cCCceEEEEecc-CCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 762 SENSKLLVYEYM-ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 762 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
+.+.+|++||-. ++.+|.+++...++ +++....-|+.||+.|+++||++ +|||||||-+||.+
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~-------------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv 703 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR-------------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV 703 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc-------------cchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence 999999999974 46799999987664 88999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCC-CCCCcchhHHHHHHHHHhCCCCCC
Q 001706 841 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANY 910 (1024)
Q Consensus 841 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGvil~el~tg~~p~~ 910 (1024)
+.+|-+||+|||.|.+... .....++||..|.|||++.+.+| ...-|||++|++||.++....||+
T Consensus 704 d~~g~~klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ecCCeEEEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999999987533 34456789999999999999988 456899999999999999998886
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-29 Score=243.83 Aligned_cols=260 Identities=19% Similarity=0.322 Sum_probs=200.3
Q ss_pred CcchhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEE-E
Q 001706 683 GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCC-I 760 (1024)
Q Consensus 683 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~-~ 760 (1024)
+...-++.+.|++.+.+|+|.||.+-.++++++...+++|.++.+. ...++|.+|...--.| .|.||+.-|+. |
T Consensus 16 el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 16 ELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred cccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 3344567889999999999999999999999999999999986543 3357899998765556 59999988864 6
Q ss_pred ecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 761 SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 761 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
+..+.++.++||++.|+|..-+.. ..+.+....+++.|+++|+.|||++ .+||||||.+|||+
T Consensus 92 qt~d~YvF~qE~aP~gdL~snv~~--------------~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLi 154 (378)
T KOG1345|consen 92 QTSDAYVFVQEFAPRGDLRSNVEA--------------AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILI 154 (378)
T ss_pred hcCceEEEeeccCccchhhhhcCc--------------ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEE
Confidence 777888999999999999987764 2377888899999999999999999 99999999999999
Q ss_pred -CCC-CcEEEeccccceecccCCCCceecccccCcccCchhhccCC-----CCCCCCcchhHHHHHHHHHhCCCCCCCCC
Q 001706 841 -DSE-FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGDE 913 (1024)
Q Consensus 841 -~~~-~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslGvil~el~tg~~p~~~~~ 913 (1024)
+.| ..||+||||.++..+. .......+..|.+||..... ...+.+|||.||+++|.++||+.||+...
T Consensus 155 f~~df~rvKlcDFG~t~k~g~-----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 155 FDADFYRVKLCDFGLTRKVGT-----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred ecCCccEEEeeecccccccCc-----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence 333 5799999999876421 22233456789999976532 35778999999999999999999998655
Q ss_pred CcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 914 HTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..+...|-|..+.++... . +. ......++...++.++-+..+|++|-...++.++
T Consensus 230 ~~d~~Y~~~~~w~~rk~~-~-~P-----~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 230 IMDKPYWEWEQWLKRKNP-A-LP-----KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred ccCchHHHHHHHhcccCc-c-Cc-----hhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 445555556655554432 1 11 1122234677888899999999999555555443
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=254.80 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=116.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-----c---CceeeEEEEEec
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-----H---ANIVKLWCCISS 762 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---pniv~l~~~~~~ 762 (1024)
.+|-+.++||-|.|++||+|-+....+.||+|+.+.. +...+....||+++++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 5788999999999999999999999999999999654 345677889999999984 2 489999999865
Q ss_pred ----CCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCE
Q 001706 763 ----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838 (1024)
Q Consensus 763 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 838 (1024)
+.++++|+|+. |.+|..++....- +.++...+.+|++||+.||.|||+.| ||+|-||||+||
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~Y-----------rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENv 219 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNY-----------RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENV 219 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCC-----------CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCccee
Confidence 45789999999 6889999886543 56899999999999999999999998 999999999999
Q ss_pred EEC
Q 001706 839 LLD 841 (1024)
Q Consensus 839 ll~ 841 (1024)
|+.
T Consensus 220 Ll~ 222 (590)
T KOG1290|consen 220 LLC 222 (590)
T ss_pred eee
Confidence 984
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=240.36 Aligned_cols=212 Identities=40% Similarity=0.576 Sum_probs=185.0
Q ss_pred eeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCH
Q 001706 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL 778 (1024)
Q Consensus 699 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 778 (1024)
||+|++|.||++....+++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998779999999986543211 357899999999999999999999999998999999999999999
Q ss_pred HHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-CCcEEEeccccceec
Q 001706 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIADFGLAKML 857 (1024)
Q Consensus 779 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DFgla~~~ 857 (1024)
.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+...
T Consensus 79 ~~~~~~~~------------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 79 KDLLKENE------------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred HHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 99987542 2478899999999999999999998 9999999999999999 899999999999876
Q ss_pred ccCCCCceecccccCcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhc
Q 001706 858 AKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936 (1024)
Q Consensus 858 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1024)
..... ......+...|++||..... .++.++|+|++|++++++
T Consensus 144 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 144 TSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred cCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 43321 23335678899999998887 888999999999999999
Q ss_pred cCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 937 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..+.+++..|++.+|++||+++++++.
T Consensus 188 ------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 467889999999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-27 Score=240.31 Aligned_cols=261 Identities=26% Similarity=0.302 Sum_probs=198.6
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecC------
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------ 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 763 (1024)
..+|...+.+|.|.- .|..|-+.-.+++||+|+.-.+.. +....++..+|..++..++|+||++++.++.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~-n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQ-NQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccc-cCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 346777788899988 677777777899999998866533 344467889999999999999999999998654
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
...|+|||||. .+|...++. .++=.+...|..|++.|++|||+. ||+||||||+||++..+
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~~---------------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~ 154 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVILM---------------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSD 154 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHHH---------------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecch
Confidence 35799999996 789888872 245577889999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 844 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
+.+||.|||+|+.-. ....++.++.|..|.|||++-+..+.+.+||||.||++.||++|+..|.+.+..+....+.+
T Consensus 155 ~~lKi~dfg~ar~e~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~ 231 (369)
T KOG0665|consen 155 CTLKILDFGLARTED---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIE 231 (369)
T ss_pred hheeeccchhhcccC---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHH
Confidence 999999999998642 22467788899999999999988899999999999999999999988876543221111100
Q ss_pred ------------------HhhccC------Cchhhh-ccCCCC--cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 924 ------------------HYAEEK------PITDAL-DKGIAE--PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 924 ------------------~~~~~~------~~~~~~-~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.+.... ...+.+ |..+.. +...-......+++.+|+..||++|.+++++++
T Consensus 232 ~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 232 QLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000000 000000 000000 011122345678999999999999999999986
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-28 Score=255.48 Aligned_cols=428 Identities=24% Similarity=0.250 Sum_probs=255.9
Q ss_pred EEEEeCCCcccc---cCCccccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeC
Q 001706 76 TGISLRHKDITQ---KIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (1024)
Q Consensus 76 ~~l~l~~~~l~~---~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 152 (1024)
..++.++.+++. .+|+ .-+.++|..|+|+...|.+|+.+++||.||||+|.|+.+-|++|.+|.+|..|-+
T Consensus 49 ~~VdCr~~GL~eVP~~LP~------~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvl 122 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPP------ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVL 122 (498)
T ss_pred ceEEccCCCcccCcccCCC------cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHh
Confidence 344555555543 3454 3488999999999777888999999999999999999999999999998877766
Q ss_pred CC-cccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccc-cccccCCCcEEEccCCc
Q 001706 153 GG-NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI-EFGMLKKLKTLWMTEAN 230 (1024)
Q Consensus 153 s~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~-~~~~l~~L~~L~L~~n~ 230 (1024)
-+ |+|+......|++|..|+.|.+.-|++.-+..+.|..|++|..|.+..|.+ ..++. +|..+..++++.+..|.
T Consensus 123 yg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~---q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 123 YGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKI---QSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred hcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhh---hhhccccccchhccchHhhhcCc
Confidence 55 999955556899999999999999999988888999999999999988852 23333 66677777777766655
Q ss_pred ccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhc--ccc-cccCCCCcCCCCCC
Q 001706 231 LIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL--KLT-DIDLSMNNLTGSIP 307 (1024)
Q Consensus 231 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~--~L~-~L~Ls~N~l~~~~p 307 (1024)
+. ..++++.+.. ++. ..|..++...-.....+.++++..+-+.-+... .+. .+....+...-...
T Consensus 200 ~i-----cdCnL~wla~-~~a------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~ 267 (498)
T KOG4237|consen 200 FI-----CDCNLPWLAD-DLA------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPA 267 (498)
T ss_pred cc-----cccccchhhh-HHh------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChH
Confidence 32 1122222221 111 122223333344444455555544443333222 111 12222222222222
Q ss_pred cccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhcccc
Q 001706 308 EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387 (1024)
Q Consensus 308 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 387 (1024)
..|..+++|+.|+|++|+|++.-+.+|.++..+++|.|..|+|..+-...|.+++.|+.|+|.+|+|+...|..
T Consensus 268 ~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~a------ 341 (498)
T KOG4237|consen 268 KCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGA------ 341 (498)
T ss_pred HHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccc------
Confidence 45777777777777777777777777777777777777777777666666777777777777777776544443
Q ss_pred ccceecccCccCCCCCcCCCCccccceeecccccCccCC-CccccccccccccccccCcccCCCCcccccCCCEEEcccC
Q 001706 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL-PTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNN 466 (1024)
Q Consensus 388 L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N 466 (1024)
|..+..|..|+|-.|.+.-.- -.|+.. .|..+.-.|..|-..+..++.++++.+
T Consensus 342 ------------------F~~~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~~~~~Cq~p~~~~~~~~~dv 396 (498)
T KOG4237|consen 342 ------------------FQTLFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVVGNPRCQSPGFVRQIPISDV 396 (498)
T ss_pred ------------------ccccceeeeeehccCcccCccchHHHHH-------HHhhCCCCCCCCCCCCchhccccchhc
Confidence 444444444444444433100 000000 112222122222222223444444444
Q ss_pred cCCCC---cccc---------cCCccccc-eeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeE
Q 001706 467 RFSGQ---IQRG---------VGSWKNLI-VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 533 (1024)
Q Consensus 467 ~l~~~---~~~~---------~~~~~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 533 (1024)
.+... .|++ -...+-+. +...|++.+. .+|..+ -..-++|+|.+|.++ .+|.+ .+.+| .+
T Consensus 397 ~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i--P~d~telyl~gn~~~-~vp~~--~~~~l-~~ 469 (498)
T KOG4237|consen 397 AFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI--PVDVTELYLDGNAIT-SVPDE--LLRSL-LL 469 (498)
T ss_pred cccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC--CchhHHHhcccchhc-ccCHH--HHhhh-hc
Confidence 33211 1111 11122222 2334444444 444433 233567788888887 67776 56677 78
Q ss_pred eccCccccCccchhhhhccccceecccCC
Q 001706 534 NLARNELSGEIPKAIGSLLVMVSLDLSGN 562 (1024)
Q Consensus 534 ~L~~N~l~g~ip~~~~~l~~L~~L~ls~N 562 (1024)
|||+|+++-.--..|.+++.|.+|-||+|
T Consensus 470 dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 470 DLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred ccccCceehhhcccccchhhhheeEEecC
Confidence 88888887555566777777777777766
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=251.60 Aligned_cols=263 Identities=23% Similarity=0.236 Sum_probs=207.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc------cCceeeEEEEEecC
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR------HANIVKLWCCISSE 763 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~l~~~~~~~ 763 (1024)
-..|.+.-..|+|-|++|.+|.+...|..||||++... +.+.+.=+.|+++|++|+ --|+++++-.|...
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 35688888889999999999999888999999999654 345667788999999995 34899999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
.++|||||-+. .+|.+.+++.+. ...+....+..++.|+.-||..|-.. +|+|.||||.|||+.+.
T Consensus 507 nHLClVFE~Ls-lNLRevLKKyG~----------nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 507 NHLCLVFEPLS-LNLREVLKKYGR----------NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred ceeEEEehhhh-chHHHHHHHhCc----------ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 99999999885 899999998776 24588889999999999999999987 99999999999999986
Q ss_pred -CcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 844 -FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 844 -~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
..+||||||.|.+..+. ..+.+..+..|.|||++.+-.|+...|+||.||+|||++||+..|.+.....+....+
T Consensus 573 k~iLKLCDfGSA~~~~en----eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASEN----EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred cceeeeccCccccccccc----cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 56899999999876443 3344566778999999999999999999999999999999999998876666555443
Q ss_pred HHh------------------hccCC----------------chhhhcc------CC-----CCcccHHHHHHHHHHHHH
Q 001706 923 RHY------------------AEEKP----------------ITDALDK------GI-----AEPCYLEEMTTVYRLALI 957 (1024)
Q Consensus 923 ~~~------------------~~~~~----------------~~~~~~~------~~-----~~~~~~~~~~~l~~li~~ 957 (1024)
... ..... +...+.+ .+ ...........+.+|+..
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 211 00000 0000000 00 001122234678899999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001706 958 CTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 958 cl~~dP~~RPs~~evl~ 974 (1024)
|+..||++|.+..++++
T Consensus 729 ml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALK 745 (752)
T ss_pred HhccChhhcCCHHHHhc
Confidence 99999999999988765
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=233.13 Aligned_cols=201 Identities=35% Similarity=0.495 Sum_probs=173.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
|...+.||+|++|.||++....+++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 45678899999999999999887899999998654321 2467899999999999999999999999998999999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
+++++|.+++..... .+++..+..++.+++.+++|||+. +++|+|++|.||+++.++.++|+|||
T Consensus 79 ~~~~~L~~~~~~~~~------------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g 143 (225)
T smart00221 79 CEGGDLFDYLRKKGG------------KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFG 143 (225)
T ss_pred cCCCCHHHHHHhccc------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCc
Confidence 999999999986432 178889999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCceecccccCcccCchhhc-cCCCCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEYA-YTTKVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 853 la~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
.+..+.... ........++..|++||.. ....++.++|||+||+++|||++|+.||..
T Consensus 144 ~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 144 LARFIHRDL-AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeeEecCcc-cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 998765432 1122335677889999998 667788899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=277.85 Aligned_cols=355 Identities=21% Similarity=0.221 Sum_probs=232.2
Q ss_pred CEEEEEeCCCcccc--cCCccccCCCceeEEEccCCC------CCCCCCccccCCC-CCCcccccCccccCCCccccccC
Q 001706 74 SVTGISLRHKDITQ--KIPPIICDLKNLTTIDLSSNS------IPGEFPEFLYNCT-KLQNLDLSQNYFVGPIPSDIDRI 144 (1024)
Q Consensus 74 ~v~~l~l~~~~l~~--~~~~~~~~l~~L~~L~L~~n~------l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l 144 (1024)
.|.++.+.-..+.. .-+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| ..
T Consensus 533 ~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~ 610 (1153)
T PLN03210 533 KVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RP 610 (1153)
T ss_pred eeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-Cc
Confidence 45666655444432 123568888888888886653 3335677676664 5888888888876 677777 46
Q ss_pred CCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEE
Q 001706 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTL 224 (1024)
Q Consensus 145 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L 224 (1024)
.+|+.|+|++|++. .+|..+..+++|++|+|++|...+.+|. ++.+++|+.|+|++|. ....+|..++.+++|+.|
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~--~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCS--SLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCC--CccccchhhhccCCCCEE
Confidence 78888888888887 6777888888888888887765446664 7788888888888875 345678888888888888
Q ss_pred EccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcC--
Q 001706 225 WMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNL-- 302 (1024)
Q Consensus 225 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l-- 302 (1024)
++++|+..+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|+|++|.+. .+|..+...+|+.|++.++..
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEK 761 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhh
Confidence 888887777777765 6788888888887655555542 456788888888876 345544445677777765332
Q ss_pred -----CCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCC
Q 001706 303 -----TGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGP 377 (1024)
Q Consensus 303 -----~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~ 377 (1024)
....+..+...++|+.|+|++|...+.+|.+++++++|+.|++++|..-+.+|..+ .+++|+.|++++|.....
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRT 840 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccc
Confidence 11122223334567777777776666677777777777777777765444556554 566777777776654444
Q ss_pred CChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccccccC
Q 001706 378 LPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDN 444 (1024)
Q Consensus 378 ~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 444 (1024)
+|.. ..+|+.|++++|.+. .+|.++.++++|+.|+|++|+--..+|..+..+.+|+.|++++|
T Consensus 841 ~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 841 FPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 4432 234555555555554 35555555555555555553222245555555555555555554
|
syringae 6; Provisional |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-27 Score=256.40 Aligned_cols=250 Identities=25% Similarity=0.301 Sum_probs=199.8
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.++|....++|.|.||.|||+++..+++..|||+++.+.. ....-+++|+-+++..+||||+.+++.+-..+..+++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~---dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG---DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC---ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 4578888999999999999999999999999999976543 2346678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
||||.+|+|.+.-+... .+++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++
T Consensus 91 MEycgggslQdiy~~Tg-------------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvkla 154 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG-------------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLA 154 (829)
T ss_pred EEecCCCcccceeeecc-------------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeec
Confidence 99999999999888654 377888889999999999999998 88999999999999999999999
Q ss_pred ccccceecccCCCCceecccccCcccCchhhc---cCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhh
Q 001706 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA---YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926 (1024)
Q Consensus 850 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 926 (1024)
|||.+-.+.. .-.....+.||+.|||||+. +.+.|...+|||+.|++..|+---+.|....-+.. + .+.
T Consensus 155 Dfgvsaqita--ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr----~--l~L 226 (829)
T KOG0576|consen 155 DFGVSAQITA--TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR----A--LFL 226 (829)
T ss_pred ccCchhhhhh--hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH----H--HHH
Confidence 9999866532 22234467899999999975 45678999999999999999988777654322110 0 010
Q ss_pred ccCCchhhhccCCCC---cccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 927 EEKPITDALDKGIAE---PCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 927 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
.. ..+... .-.....+.+.++++.|+-++|++||++..++
T Consensus 227 mT-------kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 227 MT-------KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred hh-------ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 00 111111 11223346788999999999999999987653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=236.83 Aligned_cols=200 Identities=27% Similarity=0.438 Sum_probs=168.0
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcC---CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDING---AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
.+.+.|...++||+|.|++||++.+.. ..+.||+|.+..... ...+.+|++++..+ .+.||+++.+++...
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 456678999999999999999998866 678999999855433 35689999999999 599999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
+.+.+|+||++.....++... ++...+...++.+..||+++|.. |||||||||.|++.+..
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----------------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~ 168 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----------------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRR 168 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----------------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccc
Confidence 999999999999988888763 66788899999999999999999 99999999999999864
Q ss_pred -CcEEEeccccceecccCC------------------------------------------CCceecccccCcccCchhh
Q 001706 844 -FKAKIADFGLAKMLAKQG------------------------------------------EPHTMSAVAGSFGYFAPEY 880 (1024)
Q Consensus 844 -~~~kl~DFgla~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE~ 880 (1024)
+.-.|+|||+|..++... .........||++|.|||+
T Consensus 169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence 778999999996221100 0001122459999999998
Q ss_pred ccC-CCCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 881 AYT-TKVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 881 ~~~-~~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
+.. ...+++.||||.|||+.-+++++.||..
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFK 280 (418)
T ss_pred HhhccCcCCccceeeccceeehhhcccccccc
Confidence 775 4678899999999999999999999974
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-26 Score=240.98 Aligned_cols=422 Identities=21% Similarity=0.209 Sum_probs=261.0
Q ss_pred CEEEEEeCCCcccccCCccccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccC-ccccCCCccccccCCCCcEEeC
Q 001706 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQ-NYFVGPIPSDIDRISGLQCIDL 152 (1024)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L 152 (1024)
..+.|+|..|+|+...|.+|+.+++|+.||||+|+|+.+-|.+|.++.+|..|-+-+ |+|+....+.|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 478899999999998889999999999999999999999999999999998887777 9999777789999999999999
Q ss_pred CCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCccc
Q 001706 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLI 232 (1024)
Q Consensus 153 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 232 (1024)
.-|++.-.....|..|++|..|.+..|.+..+--..|..+.+++.+.+..|... ..-+|+++- ...
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i----------cdCnL~wla----~~~ 213 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI----------CDCNLPWLA----DDL 213 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc----------cccccchhh----hHH
Confidence 999999888889999999999999999999444459999999999999988621 122222221 011
Q ss_pred ccCchhhcCCCCCCeeeccCCcCCCCcccccCC-CCCCcEEEccCCccCCCCCc-chhhc-ccccccCCCCcCCCCCCcc
Q 001706 233 GEIPEAMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPS-SVEAL-KLTDIDLSMNNLTGSIPEE 309 (1024)
Q Consensus 233 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~L~~N~l~~~~~~-~~~~~-~L~~L~Ls~N~l~~~~p~~ 309 (1024)
...|..++...-..-..+.++++...-+..|.. +..+..=..+.+...+..|. .|..+ +|+.|+|++|+|+++-+.+
T Consensus 214 a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~a 293 (498)
T KOG4237|consen 214 AMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGA 293 (498)
T ss_pred hhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhh
Confidence 122333333333333344444444222222221 11111111122222222222 23322 5666777777777667777
Q ss_pred cCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCC-hhhhccccc
Q 001706 310 FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLP-ENLCAGGVL 388 (1024)
Q Consensus 310 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p-~~~~~~~~L 388 (1024)
|..+..++.|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|..+.+|..|.|-.|.+.-.-- .|+..
T Consensus 294 Fe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~---- 369 (498)
T KOG4237|consen 294 FEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE---- 369 (498)
T ss_pred hcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH----
Confidence 7777777777777777775555667777777777777777777777777777778888777777652110 11111
Q ss_pred cceecccCccCCCCCcCCCCccccceeecccccCc---cCCCccccccccccccccccCcccCCCCcccccCCC-EEEcc
Q 001706 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS---GELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLT-RLEIS 464 (1024)
Q Consensus 389 ~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~-~L~Ls 464 (1024)
.+..+.-.|..|- ++-..++.++++.+.+. ...|++.+... ++.-|. .++-+. ...-|
T Consensus 370 ---Wlr~~~~~~~~~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------s~~cP~-~c~c~~tVvRcS 431 (498)
T KOG4237|consen 370 ---WLRKKSVVGNPRC--QSPGFVRQIPISDVAFGDFRCGGPEELGCLT------------SSPCPP-PCTCLDTVVRCS 431 (498)
T ss_pred ---HHhhCCCCCCCCC--CCCchhccccchhccccccccCCccccCCCC------------CCCCCC-CcchhhhhHhhc
Confidence 1122222222221 11123455555555443 22233221110 001111 011121 12223
Q ss_pred cCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCc
Q 001706 465 NNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARN 538 (1024)
Q Consensus 465 ~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 538 (1024)
++.++ .+|..+. ..-++|.+.+|.++ .+|.+ .+.+| .+||++|+++-.--..|.++++|..|-||+|
T Consensus 432 nk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 432 NKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred ccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 33333 3333221 23445566666666 66666 46666 7777777777444456777778888777766
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-25 Score=221.82 Aligned_cols=255 Identities=21% Similarity=0.289 Sum_probs=197.7
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.++....+|.+...|+.|+|++.++ .+++|++. .+....+..++|.+|...++...||||+.+++.|..+....++.
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqgn--divakil~-vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQGN--DIVAKILN-VREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred hhhhhhhhhccCCCcccccccccCc--chhhhhhh-hhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 3455567788999999999999644 46777663 34455566688999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
.||+.|+|+..+++... -..+-.++.+++.++|+|++|||+. ++-|.---+.++.|++|++.+++|+-
T Consensus 267 q~mp~gslynvlhe~t~-----------vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism 334 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTS-----------VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM 334 (448)
T ss_pred eeccchHHHHHHhcCcc-----------EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec
Confidence 99999999999998764 3567778899999999999999987 55555667999999999999888752
Q ss_pred cccceecccCCCCceecccccCcccCchhhccCCCC---CCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV---NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
+-+++. .......-.|.||+||.+...+- -.++|+|||++++||+.|+..||..-.+-+.
T Consensus 335 -ad~kfs------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec---------- 397 (448)
T KOG0195|consen 335 -ADTKFS------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC---------- 397 (448)
T ss_pred -ccceee------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----------
Confidence 212221 11122334688999999886643 3579999999999999999999975432110
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
-..+.-.+++...++..+..+.++|.-|+++||.+||.++.|+-.|+++.
T Consensus 398 ---gmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 398 ---GMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ---hhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 01122233444445556688999999999999999999999999998863
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=271.40 Aligned_cols=336 Identities=21% Similarity=0.270 Sum_probs=261.4
Q ss_pred chhhcCCCCCCeeeccCCc------CCCCcccccCCCC-CCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCc
Q 001706 236 PEAMSNLSSLEILALNGNH------LEGAIPSGLFLLN-NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPE 308 (1024)
Q Consensus 236 p~~l~~l~~L~~L~L~~N~------l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 308 (1024)
+.+|.+|.+|+.|.+..+. +...+|..+..++ +|+.|.+.+|.++ .+|..+...+|++|++++|++. .++.
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFRPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCCccCCcEEECcCcccc-cccc
Confidence 3467778888888776553 2334566666654 5888888888776 4455566667888888888887 5677
Q ss_pred ccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccc
Q 001706 309 EFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388 (1024)
Q Consensus 309 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L 388 (1024)
.+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++.+++|+.|++++|...+.+|..+ .+++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 778888888888888765556664 7788888888888887667788888888888888888876666777665 67888
Q ss_pred cceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccccccCccc-------CCCCc--ccccCCC
Q 001706 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS-------GELPS--KTAWNLT 459 (1024)
Q Consensus 389 ~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~-------~~~p~--~~~~~L~ 459 (1024)
+.|.+++|...+.+|.. .++|+.|+|++|.+. .+|..+ .+.+|+.|++.++... ...+. ..+.+|+
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~ 781 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT 781 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccch
Confidence 88888888777777754 357889999999987 678765 5778888888774322 11111 1235899
Q ss_pred EEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCcc
Q 001706 460 RLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539 (1024)
Q Consensus 460 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 539 (1024)
.|+|++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|+|++|.....+|.. .++|+.|+|++|.
T Consensus 782 ~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~ 857 (1153)
T PLN03210 782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTG 857 (1153)
T ss_pred heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCC
Confidence 99999999888999999999999999999986555888776 7999999999998665566654 3689999999999
Q ss_pred ccCccchhhhhccccceecccC-CcCCCCCCCcccccc-cccccccCCc
Q 001706 540 LSGEIPKAIGSLLVMVSLDLSG-NQFSGEIPPEIGQLK-LNTFNLSSNK 586 (1024)
Q Consensus 540 l~g~ip~~~~~l~~L~~L~ls~-N~l~g~ip~~~~~l~-l~~l~l~~N~ 586 (1024)
++ .+|.+++.+++|+.|+|++ |++. .+|..+..++ |+.++++++.
T Consensus 858 i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 858 IE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred Cc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 98 7999999999999999998 6666 6888888884 8999998874
|
syringae 6; Provisional |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=256.79 Aligned_cols=114 Identities=33% Similarity=0.473 Sum_probs=53.4
Q ss_pred CCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeeccc
Q 001706 244 SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFS 323 (1024)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 323 (1024)
.-..|+|++|.|+ .+|..+. .+|+.|++++|+|+.. |.. ..+|++|+|++|+|+ .+|.. .++|+.|++++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~L-P~l--p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSL-PAL--PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCC-CCC--CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 3445666666666 4555443 2556666666665532 221 124555555555555 23321 23455555555
Q ss_pred ccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCC
Q 001706 324 NHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFS 375 (1024)
Q Consensus 324 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 375 (1024)
|+++ .+|..+ ..|+.|++++|+|+. +|. .+++|+.|+|++|+++
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLA 315 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccc
Confidence 5554 233211 334445555555542 222 1234555555555544
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-24 Score=254.86 Aligned_cols=269 Identities=26% Similarity=0.378 Sum_probs=183.6
Q ss_pred CCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeeccc
Q 001706 268 NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFN 347 (1024)
Q Consensus 268 ~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 347 (1024)
+-..|+|++|.|+. +|..+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|++++
T Consensus 202 ~~~~LdLs~~~Lts-LP~~l~-~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 202 GNAVLNVGESGLTT-LPDCLP-AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CCcEEEcCCCCCCc-CCcchh-cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 35677888888874 444333 26777778888777 35542 467777777777777 44532 35677777777
Q ss_pred ccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCC
Q 001706 348 NSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 427 (1024)
Q Consensus 348 N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 427 (1024)
|+|+. +|.. +.+|+.|++++|+++ .+ |.. .++|+.|+|++|+|+ .+|
T Consensus 272 N~L~~-Lp~l---p~~L~~L~Ls~N~Lt-~L------------------------P~~---p~~L~~LdLS~N~L~-~Lp 318 (788)
T PRK15387 272 NPLTH-LPAL---PSGLCKLWIFGNQLT-SL------------------------PVL---PPGLQELSVSDNQLA-SLP 318 (788)
T ss_pred Cchhh-hhhc---hhhcCEEECcCCccc-cc------------------------ccc---ccccceeECCCCccc-cCC
Confidence 77763 3332 245666777777666 22 321 256778888888877 355
Q ss_pred ccccccccccccccccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCc
Q 001706 428 TGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507 (1024)
Q Consensus 428 ~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 507 (1024)
.. ..+|+.|++++|+|++ +|. ...+|++|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+
T Consensus 319 ~l---p~~L~~L~Ls~N~L~~-LP~-lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~ 385 (788)
T PRK15387 319 AL---PSELCKLWAYNNQLTS-LPT-LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLK 385 (788)
T ss_pred CC---cccccccccccCcccc-ccc-cccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccc
Confidence 42 2356777888888873 553 23578888888888885 3432 246777888888888 46653 35688
Q ss_pred EEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCccccc-ccccccccCCc
Q 001706 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNK 586 (1024)
Q Consensus 508 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l-~l~~l~l~~N~ 586 (1024)
.|+|++|+|+ .+|... .+|+.|++++|+|+ .+|... .+|+.|++++|+|+ .+|..++.+ .|..|+|++|+
T Consensus 386 ~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 386 ELIVSGNRLT-SLPVLP---SELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred eEEecCCccc-CCCCcc---cCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCC
Confidence 8899999888 466533 57888899999988 577643 45778889999988 788888877 48888999999
Q ss_pred cccCCCccccccccC
Q 001706 587 LYGNIPDEFNNLAYD 601 (1024)
Q Consensus 587 l~g~~p~~~~~~~~~ 601 (1024)
|+|.+|..+..++..
T Consensus 457 Ls~~~~~~L~~l~s~ 471 (788)
T PRK15387 457 LSERTLQALREITSA 471 (788)
T ss_pred CCchHHHHHHHHhcC
Confidence 998888877665443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=252.12 Aligned_cols=296 Identities=21% Similarity=0.326 Sum_probs=157.9
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCCCC----CCCCCCCCCCCc----------------ceeeCCCEEEEEeCCCc
Q 001706 25 FEVIPQSPNTEERTILLNLKQQLGNPPSLQS----WTSTSSPCDWPE----------------ITCTFNSVTGISLRHKD 84 (1024)
Q Consensus 25 ~~~~~~~~~~~~~~aL~~~k~~~~~~~~l~s----w~~~~~~c~w~g----------------v~C~~~~v~~l~l~~~~ 84 (1024)
.+-.+..+.++|.+.+....+.+..|+.+++ |..++++|.=.. |.|....||.+...+..
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~ 132 (754)
T PRK15370 53 LCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESE 132 (754)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCccccccccccc
Confidence 3455678899999999999999998887766 999999995433 78888888887765532
Q ss_pred ccccCCc--c-------------------------------ccCCCceeEEEccCCCCCCCCCccccCCCCCCcccccCc
Q 001706 85 ITQKIPP--I-------------------------------ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131 (1024)
Q Consensus 85 l~~~~~~--~-------------------------------~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 131 (1024)
....... . -+-..+.+.|++++++++ .+|..+. ++|+.|+|++|
T Consensus 133 ~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N 209 (754)
T PRK15370 133 QASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNN 209 (754)
T ss_pred ccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCC
Confidence 2111000 0 011134556666666666 4554443 35666666666
Q ss_pred cccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCc
Q 001706 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211 (1024)
Q Consensus 132 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~ 211 (1024)
+|+ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++|.+. .+|..+. ++|+.|++++|++. .+
T Consensus 210 ~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~---~L 277 (754)
T PRK15370 210 ELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS---CL 277 (754)
T ss_pred CCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC---cc
Confidence 666 3444333 35666666666666 4554443 35666666666665 4454443 35666666665432 23
Q ss_pred cccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcc
Q 001706 212 PIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK 291 (1024)
Q Consensus 212 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 291 (1024)
|..+. ++|+.|++++|++.+ +|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|.+++ +|..+. .+
T Consensus 278 P~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~-~s 347 (754)
T PRK15370 278 PENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP-PE 347 (754)
T ss_pred ccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCcccc-CChhhc-Cc
Confidence 33332 345555555555443 333222 24555555555555 2333222 345555555555543 222221 24
Q ss_pred cccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeeccccccc
Q 001706 292 LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLS 351 (1024)
Q Consensus 292 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 351 (1024)
|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+
T Consensus 348 L~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 348 LQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred ccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc
Confidence 555555555554 2343332 34555555555554 3333332 23445555555554
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-24 Score=267.06 Aligned_cols=196 Identities=20% Similarity=0.240 Sum_probs=138.3
Q ss_pred cccc-CceeeEEEEE-------ecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhc
Q 001706 747 TIRH-ANIVKLWCCI-------SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818 (1024)
Q Consensus 747 ~l~h-pniv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 818 (1024)
.++| +||+++++++ ...+..+.++||+ +++|.+++.... ..+++..++.++.||++||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~al~ 94 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD------------RSVDAFECFHVFRQIVEIVN 94 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc------------ccccHHHHHHHHHHHHHHHH
Confidence 4455 5777777776 2234677889988 579999997532 24889999999999999999
Q ss_pred cccccCCCceEeCCCCCCCEEECCC-------------------CcEEEeccccceecccCCC--------------Cce
Q 001706 819 YMHHDCTPQIIHRDVKSSNILLDSE-------------------FKAKIADFGLAKMLAKQGE--------------PHT 865 (1024)
Q Consensus 819 ~LH~~~~~~ivH~Dlk~~Nill~~~-------------------~~~kl~DFgla~~~~~~~~--------------~~~ 865 (1024)
|||++ +|+||||||+|||++.. +.+|++|||+++....... ...
T Consensus 95 ~lH~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (793)
T PLN00181 95 AAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMK 171 (793)
T ss_pred HHHhC---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccc
Confidence 99998 99999999999999654 4556666666653211000 000
Q ss_pred ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccH
Q 001706 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYL 945 (1024)
Q Consensus 866 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1024)
.....||+.|||||++.+..++.++|||||||++|||++|..|+..... ........ . ..+...
T Consensus 172 ~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~------~~~~~~~~-----~-----~~~~~~ 235 (793)
T PLN00181 172 QILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR------TMSSLRHR-----V-----LPPQIL 235 (793)
T ss_pred ccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH------HHHHHHHh-----h-----cChhhh
Confidence 1123578899999999999999999999999999999998877542110 00000000 0 001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 946 EEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 946 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
........++.+||+.+|.+||++.|+++
T Consensus 236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred hcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 12345568889999999999999999985
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-23 Score=201.25 Aligned_cols=261 Identities=21% Similarity=0.231 Sum_probs=203.4
Q ss_pred hhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceE
Q 001706 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKL 767 (1024)
Q Consensus 689 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 767 (1024)
....|..+++||.|+||.+|.|....+|+.||||+-..... .-.+..|.++++.++ ...|..+..+..+.....
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 45679999999999999999999999999999998754433 235778999999996 467777888888889999
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC---C
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE---F 844 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~ 844 (1024)
+|||.. |.+|.+++.-..+ .++..+++-+|-|++.-++|+|.+ +++||||||+|+|..-+ .
T Consensus 88 lVMdLL-GPsLEdLfnfC~R------------~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~ 151 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSR------------RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCN 151 (341)
T ss_pred eeeecc-CccHHHHHHHHhh------------hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccc
Confidence 999999 6899999886554 488899999999999999999998 99999999999999654 5
Q ss_pred cEEEeccccceecccCCC-----CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHH
Q 001706 845 KAKIADFGLAKMLAKQGE-----PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~ 919 (1024)
.+.++|||+|+.+.+... ........||.+|.+-....+...+.+.|+-|+|.+|.++-.|..||++-....-.+
T Consensus 152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q 231 (341)
T KOG1163|consen 152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ 231 (341)
T ss_pred eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence 689999999998754322 223345679999999888888888999999999999999999999998765433221
Q ss_pred HHHHHhh--ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 001706 920 WAWRHYA--EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979 (1024)
Q Consensus 920 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 979 (1024)
. .+.+. ......+.+-.++ +.++.-.+.-|-..--++-|+..-+-+.+.-+
T Consensus 232 K-yEkI~EkK~s~~ie~LC~G~--------P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 232 K-YEKISEKKMSTPIEVLCKGF--------PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred H-HHHHHHhhcCCCHHHHhCCC--------cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 1 11111 1112222222322 35677788888888888888887776655444
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.4e-23 Score=207.89 Aligned_cols=167 Identities=22% Similarity=0.245 Sum_probs=127.0
Q ss_pred CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccce
Q 001706 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 855 (1024)
Q Consensus 776 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~ 855 (1024)
|+|.++++..+ ..++|..++.|+.|++.||+|||+. + ||+||+++.++.+++ ||.++
T Consensus 1 GsL~~~l~~~~------------~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~ 57 (176)
T smart00750 1 VSLADILEVRG------------RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVA 57 (176)
T ss_pred CcHHHHHHHhC------------CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceE
Confidence 68899987543 2489999999999999999999988 5 999999999999999 99998
Q ss_pred ecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc-hHHHHHHHhhccCCchhh
Q 001706 856 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS-LAEWAWRHYAEEKPITDA 934 (1024)
Q Consensus 856 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 934 (1024)
..... ...||+.|||||++.+..++.++|||||||++|||++|+.||....... .............+
T Consensus 58 ~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 126 (176)
T smart00750 58 FKTPE-------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP---- 126 (176)
T ss_pred eeccc-------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc----
Confidence 75332 1258899999999999999999999999999999999999986543221 11111111111000
Q ss_pred hccCCCCcccHHHHH--HHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 935 LDKGIAEPCYLEEMT--TVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 935 ~~~~~~~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
. .......... .+.+++.+||+.+|++||++.|+++.+....
T Consensus 127 --~--~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 127 --R--DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred --c--ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0 0011122222 6899999999999999999999999876653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.8e-23 Score=224.59 Aligned_cols=180 Identities=20% Similarity=0.202 Sum_probs=137.3
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcC-CCcEEEEEEeccchh--hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCC
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDING-AGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 764 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 764 (1024)
.+.+.|+..+.||+|+||+||+|.+.. +++.||||++..... ......+.+.+|++++++++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 346689999999999999999998865 677889998743211 123345679999999999999999853322 24
Q ss_pred ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCC-CCCCEEECCC
Q 001706 765 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV-KSSNILLDSE 843 (1024)
Q Consensus 765 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-k~~Nill~~~ 843 (1024)
..|+||||++|++|... . .. . ...++.|+++|++|||+. ||+|||| ||+||+++.+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~--~~--------------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~ 148 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-R--PH--------------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPD 148 (365)
T ss_pred CcEEEEEccCCCCHHHh-C--cc--------------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCC
Confidence 68999999999999632 1 00 0 136788999999999998 9999999 9999999999
Q ss_pred CcEEEeccccceecccCCCCce------ecccccCcccCchhhccCCC------CCCCCcch
Q 001706 844 FKAKIADFGLAKMLAKQGEPHT------MSAVAGSFGYFAPEYAYTTK------VNEKIDIY 893 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~------~~~~sDvw 893 (1024)
+.+||+|||+|+.+...+.... .+...+++.|+|||.+...+ .+..+|-|
T Consensus 149 ~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 149 GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9999999999998765432222 23456788999999886542 33446766
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=205.12 Aligned_cols=261 Identities=17% Similarity=0.166 Sum_probs=202.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
.|++.++||+|+||.+|.|+..-++++||||.-..... .-++..|.+.++.| ..+.|...|-+..++.+-.||+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC-----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 58899999999999999999988999999997643322 24567788888888 5899999998888888999999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-----c
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-----K 845 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~ 845 (1024)
|.. |.||+|++.-.++ .++.+++..+|.|++.-++|+|++ ..|+|||||+|+||...+ .
T Consensus 104 dLL-GPSLEDLFD~CgR------------~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR------------RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred hhh-CcCHHHHHHHhcC------------cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCce
Confidence 999 7899999987764 589999999999999999999999 999999999999997554 5
Q ss_pred EEEeccccceecccCCC-----CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 846 AKIADFGLAKMLAKQGE-----PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 846 ~kl~DFgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
+.++|||+|+.+.+... ........||-+||+-....+.+.+.+.|+-|+|-++.+.+-|..||.+-......+
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~- 246 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE- 246 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH-
Confidence 89999999998865432 223345679999999999999999999999999999999999999999865433222
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 980 (1024)
..+++.+.+..... .......+.++..-+.-.-+.+-.+-|+.+-+...+..+.
T Consensus 247 kYeKIGe~Kr~T~i------~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 247 KYEKIGETKRSTPI------EVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred HHHHhccccccCCH------HHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 12222221111100 0011123456666666667778889999887766555544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=218.82 Aligned_cols=263 Identities=20% Similarity=0.208 Sum_probs=198.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCC-cEEEEEEeccchhhhHHHHHHHHHHHHHHhcccc----CceeeEEEEE-ecCCc
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAG-EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH----ANIVKLWCCI-SSENS 765 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~~~~-~~~~~ 765 (1024)
+|++.+.||+|+||.||.|.....+ ..+|+|......... ...+..|+.++..+.. +++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999987654 678999875432211 1167788888888862 6999999988 47778
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC--
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-- 843 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-- 843 (1024)
.++||+.+ |.+|.++...... ..++..+..+|+.|++.+|+++|+. |++||||||.|+++...
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~-----------~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~ 160 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPP-----------GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSR 160 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCC-----------CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCC
Confidence 89999988 7899998865442 4689999999999999999999999 99999999999999865
Q ss_pred ---CcEEEeccccce--ecccCCC-----Cce-ecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCC
Q 001706 844 ---FKAKIADFGLAK--MLAKQGE-----PHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912 (1024)
Q Consensus 844 ---~~~kl~DFgla~--~~~~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~ 912 (1024)
..+.+.|||+|+ .+..... ... .....||.+|+++....+...+++.|+||+++++.|+..|..||...
T Consensus 161 ~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~ 240 (322)
T KOG1164|consen 161 SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL 240 (322)
T ss_pred cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence 469999999998 3322211 111 23456999999999999999999999999999999999999999765
Q ss_pred CCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 001706 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 982 (1024)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 982 (1024)
................. ... .....+..+.++...+-..+...+|....+...+++....
T Consensus 241 ~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 241 EMTDLKSKFEKDPRKLL-TDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred cccchHHHHHHHhhhhc-ccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 43322221111111100 000 1111224566666666668999999999999998888643
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-22 Score=238.27 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=149.7
Q ss_pred CCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeeccc
Q 001706 268 NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFN 347 (1024)
Q Consensus 268 ~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 347 (1024)
+.+.|++++++++.. |..+. ..++.|+|++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ..|+.|+|++
T Consensus 179 ~~~~L~L~~~~LtsL-P~~Ip-~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTTI-PACIP-EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCcC-Ccccc-cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 456777777777743 33221 25677777777777 3454433 46677777777766 4454432 3566666666
Q ss_pred ccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCC
Q 001706 348 NSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 427 (1024)
Q Consensus 348 N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 427 (1024)
|+++ .+|..+. ++|+.|++++|+++ . +|..+. ++|+.|+|++|+|+ .+|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~------------------------LP~~l~--~sL~~L~Ls~N~Lt-~LP 299 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-C------------------------LPENLP--EELRYLSVYDNSIR-TLP 299 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-c------------------------cccccC--CCCcEEECCCCccc-cCc
Confidence 6665 3444432 35566666666555 2 333332 36777788888777 456
Q ss_pred ccccccccccccccccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCc
Q 001706 428 TGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507 (1024)
Q Consensus 428 ~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 507 (1024)
..+. .+|+.|++++|.++ .+|.....+|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+ .++|+
T Consensus 300 ~~lp--~sL~~L~Ls~N~Lt-~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~ 370 (754)
T PRK15370 300 AHLP--SGITHLNVQSNSLT-ALPETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTIT 370 (754)
T ss_pred ccch--hhHHHHHhcCCccc-cCCccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcC
Confidence 5443 36777778888777 3555455677777777777774 444332 56777777777776 456544 25677
Q ss_pred EEEccCcccCCCCccccccccccCeEeccCccccCccchhhhh----ccccceecccCCcCC
Q 001706 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGS----LLVMVSLDLSGNQFS 565 (1024)
Q Consensus 508 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~----l~~L~~L~ls~N~l~ 565 (1024)
.|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|..+.+ ++.+..|++.+|+|+
T Consensus 371 ~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 371 TLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred EEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 7777777776 4555543 35777777777776 55554443 356667777777766
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-22 Score=231.96 Aligned_cols=258 Identities=19% Similarity=0.193 Sum_probs=192.0
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWN---NRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
...+++|.|++|.|+.+........++.|.+.. ...........+..|+.+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 346789999999888877765566566665431 11222233334888888888999999988877666666555669
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
|||++ +|..++.... .+.-..+..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|
T Consensus 401 E~~~~-Dlf~~~~~~~-------------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~D 463 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG-------------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIID 463 (601)
T ss_pred hcccH-HHHHHHhccc-------------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEee
Confidence 99998 9999998653 367778889999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCC--ceecccccCcccCchhhccCCCCCCC-CcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhc
Q 001706 851 FGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTTKVNEK-IDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927 (1024)
Q Consensus 851 Fgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 927 (1024)
||.+..+....+. .......|+-.|+|||.+.+..|.++ .||||.|+++..|.+|+.||......+... ..
T Consensus 464 fg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------~~ 537 (601)
T KOG0590|consen 464 FGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------KT 537 (601)
T ss_pred cCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch------hh
Confidence 9999876554443 45566789999999999999999875 899999999999999999996543322110 00
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
.....+.-...-........+.+...++.++++.||.+|.++.+|++
T Consensus 538 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 538 NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000000000011112333567788999999999999999999986
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=203.39 Aligned_cols=265 Identities=31% Similarity=0.387 Sum_probs=201.2
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccC-ceeeEEEEEecCCceEEEEe
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~lv~e 771 (1024)
|...+.||.|+||.||++.+. ..+|+|.+.............+.+|+.+++.+.|+ +++++++++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 566788999999999999886 77999998665544434578899999999999988 79999999977777899999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC-cEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~D 850 (1024)
|+.++++.+++...... ..+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~d 145 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK----------GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLID 145 (384)
T ss_pred cCCCCcHHHHHHhcccc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEec
Confidence 99999999777654320 2477888999999999999999998 999999999999999998 799999
Q ss_pred cccceecccCCCCc----eecccccCcccCchhhccC---CCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHH
Q 001706 851 FGLAKMLAKQGEPH----TMSAVAGSFGYFAPEYAYT---TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923 (1024)
Q Consensus 851 Fgla~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 923 (1024)
||.++.+....... ......||..|+|||.+.+ ..+....|+||+|++++++++|..|+..............
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 225 (384)
T COG0515 146 FGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225 (384)
T ss_pred cCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH
Confidence 99998654433221 3456789999999999987 5788999999999999999999999765543101111111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
.......- .................+.+++..|+..+|..|.+..+....
T Consensus 226 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTP--SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCc--ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111100 000000000002223577889999999999999998887764
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-20 Score=197.17 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=158.7
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc----------cCceeeEEEEEe-
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR----------HANIVKLWCCIS- 761 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------hpniv~l~~~~~- 761 (1024)
+...+.||.|+++.||.+++..+++.+|||++...........+++.+|.-....+. |-.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 455688999999999999999999999999987666555556778888876665532 212222222111
Q ss_pred --------c---CC-----ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCC
Q 001706 762 --------S---EN-----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCT 825 (1024)
Q Consensus 762 --------~---~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 825 (1024)
. .. ..+++|+-+. ++|.+++..-.... . .........+..+..|+++.+++||+.
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~----~--~~~~l~~~arl~lT~Q~I~lvA~Lh~~-- 164 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRA----Q--THSPLAFAARLSLTVQMIRLVANLHSY-- 164 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHT----T--TSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcc----c--ccchhHHHHHHHHHHHHHHHHHHHhhc--
Confidence 1 11 2367888885 78888866321100 0 012345566788889999999999999
Q ss_pred CceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccC--------CCCCCCCcchhHHH
Q 001706 826 PQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT--------TKVNEKIDIYSFGV 897 (1024)
Q Consensus 826 ~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslGv 897 (1024)
|+||+||+|+|++++.+|.++|+||+.....+. ... ....+..|.+||.... ..++.+.|.|++|+
T Consensus 165 -GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~--~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 165 -GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT---RYR--CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp -TEEEST-SGGGEEE-TTS-EEE--GGGEEETTE---EEE--GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred -ceEecccceeeEEEcCCCCEEEcChHHHeecCc---eee--ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999999998766422 111 1345678999997644 25788999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCC
Q 001706 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR 966 (1024)
Q Consensus 898 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 966 (1024)
++|.|++++.||..........+ .-..|. +.++.+..+|..+++.+|++|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEW------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGG------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCccccccc------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999999975433221111 112344 667889999999999999988
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-21 Score=213.37 Aligned_cols=188 Identities=27% Similarity=0.308 Sum_probs=157.9
Q ss_pred eeecCcEEEEEEE---EcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEEEeccC
Q 001706 699 IGSGGSGQVYRID---INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 699 ig~G~~g~Vy~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~ 774 (1024)
+|+|+||.|+.+. ..+.+.-+|.|+.++......... ....|-.++..++ ||.++++.-.++.+...+++++|..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 6899999999643 344577899998876544332222 5666778888886 9999999999999999999999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla 854 (1024)
+|.+...+..... ++..........++-|++++|+. +|+|||+|++||+++.+|++++.|||++
T Consensus 81 gg~lft~l~~~~~-------------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfgls 144 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM-------------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLS 144 (612)
T ss_pred cchhhhccccCCc-------------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhh
Confidence 9999988876543 67777778888899999999999 9999999999999999999999999999
Q ss_pred eecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCC
Q 001706 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 911 (1024)
Q Consensus 855 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~ 911 (1024)
+..-+... .+||..|||||++. .+..++|.||||++++||+||..||.+
T Consensus 145 ke~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 145 KEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 87543321 27899999999988 677899999999999999999999876
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-20 Score=189.67 Aligned_cols=175 Identities=14% Similarity=0.139 Sum_probs=135.6
Q ss_pred HhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHH------HHHHHHHHhccccCceeeEEEEEe
Q 001706 688 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHANIVKLWCCIS 761 (1024)
Q Consensus 688 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~l~hpniv~l~~~~~ 761 (1024)
-+..+|+..+++|.|+||.||.+.. ++..+|||.++......+..... +.+|++.+.+++||+|..+.+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 3456899999999999999999765 36679999996554434443333 689999999999999999988865
Q ss_pred cC--------CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCC
Q 001706 762 SE--------NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 833 (1024)
Q Consensus 762 ~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 833 (1024)
+. +..++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----------------~~~----~~~~~i~~~l~~lH~~---gi~H~Di 161 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE-----------------ISE----DVKAKIKASIESLHQH---GMVSGDP 161 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh-----------------ccH----HHHHHHHHHHHHHHHc---CCccCCC
Confidence 43 35789999999999987632 111 2456999999999999 9999999
Q ss_pred CCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHH
Q 001706 834 KSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELV 903 (1024)
Q Consensus 834 k~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~ 903 (1024)
+|+||+++.++ ++++|||..+....... ...+.....+..++|+|+|||++....
T Consensus 162 kp~Nili~~~g-i~liDfg~~~~~~e~~a--------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 162 HKGNFIVSKNG-LRIIDLSGKRCTAQRKA--------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ChHHEEEeCCC-EEEEECCCcccccchhh--------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99999999988 99999998765421110 011344556777999999999987665
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=184.21 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=107.8
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHH-----------------------HHHHHHHHHHHHhccccCc
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK-----------------------LEKEFIAEIEILGTIRHAN 752 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~hpn 752 (1024)
...||+|+||.||+|... +|+.||||+++........ ......+|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999987 8999999998654211100 0123345999999998777
Q ss_pred eeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccc-cccCCCceEeC
Q 001706 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYM-HHDCTPQIIHR 831 (1024)
Q Consensus 753 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~ 831 (1024)
+.....+.. ...++||||++++++....... ..+++....+++.|++.+|+|+ |+. +|+||
T Consensus 81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-------------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHr 142 (190)
T cd05147 81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-------------APLSESKARELYLQVIQIMRILYQDC---RLVHA 142 (190)
T ss_pred CCCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-------------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 643332222 2348999999987766443221 2377889999999999999999 677 99999
Q ss_pred CCCCCCEEECCCCcEEEeccccceec
Q 001706 832 DVKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 832 Dlk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
||||+||+++ ++.++++|||+|...
T Consensus 143 DlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 143 DLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCCHHHEEEE-CCcEEEEEccccccC
Confidence 9999999998 578999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-21 Score=179.11 Aligned_cols=168 Identities=28% Similarity=0.492 Sum_probs=131.8
Q ss_pred CCcCCCCccccceeecccccCccCCCccccccccccccccccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccc
Q 001706 402 VPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKN 481 (1024)
Q Consensus 402 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~ 481 (1024)
+|..+.++.+|+.|++++|++. ++|..+..++.|+.|+++-|++ . ..|.+|++++.
T Consensus 48 vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl----------------------~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 48 VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRL----------------------N-ILPRGFGSFPA 103 (264)
T ss_pred cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhh----------------------h-cCccccCCCch
Confidence 3444455555555555555555 4555555555554444444444 3 67888899999
Q ss_pred cceeecCCccccc-cCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceeccc
Q 001706 482 LIVFKASNNLFSG-EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLS 560 (1024)
Q Consensus 482 L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls 560 (1024)
|++|||++|++.. .+|..|..+..|+.|+|++|.+. .+|..++++++||.|.+..|.|- .+|..+|.++.|++|.+.
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 9999999888874 67888989999999999999998 89999999999999999999998 899999999999999999
Q ss_pred CCcCCCCCCCcccccc----cccccccCCccccCCCcccc
Q 001706 561 GNQFSGEIPPEIGQLK----LNTFNLSSNKLYGNIPDEFN 596 (1024)
Q Consensus 561 ~N~l~g~ip~~~~~l~----l~~l~l~~N~l~g~~p~~~~ 596 (1024)
+|+++ .+|++++++. -+.+.+.+|++-..|.++|.
T Consensus 182 gnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf~ 220 (264)
T KOG0617|consen 182 GNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIAEQFL 220 (264)
T ss_pred cceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHHHHH
Confidence 99998 9999999874 34677888988877776653
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-19 Score=177.15 Aligned_cols=191 Identities=13% Similarity=0.067 Sum_probs=141.3
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHH-HHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEEEEe
Q 001706 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK-LEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e 771 (1024)
.+...|++|+||+||.+.. .+.+++.+.+.....+... ....+.+|+++++++. |+++++++++ ...+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999997765 5777887776443322111 1235889999999995 5889999886 34699999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCC-CCCCEEECCCCcEEEec
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV-KSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~D 850 (1024)
|+.|.+|.+.... ....++.|++.+++++|++ ||+|||| ||.||+++.++.++|+|
T Consensus 79 yI~G~~L~~~~~~--------------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 79 YLAGAAMYQRPPR--------------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred eecCccHHhhhhh--------------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEE
Confidence 9999998653321 0124678999999999999 9999999 79999999999999999
Q ss_pred cccceecccCCCC------ce-----ecccccCcccCchhhccCC-CCC-CCCcchhHHHHHHHHHhCCCCCCCCC
Q 001706 851 FGLAKMLAKQGEP------HT-----MSAVAGSFGYFAPEYAYTT-KVN-EKIDIYSFGVVLLELVTGKEANYGDE 913 (1024)
Q Consensus 851 Fgla~~~~~~~~~------~~-----~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwslGvil~el~tg~~p~~~~~ 913 (1024)
||+|......... .+ ......++.|++|+...-- ..+ .+.+.++-|+-+|.++||+.+..++.
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 9999865433210 00 0112257788888754432 333 56789999999999999999987654
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.9e-21 Score=175.11 Aligned_cols=188 Identities=29% Similarity=0.495 Sum_probs=125.7
Q ss_pred cchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCC
Q 001706 285 SSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSAL 364 (1024)
Q Consensus 285 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L 364 (1024)
..+....++.|.||+|+++ .+|..++.+.+|+.|++++|++. ++|.+++.++.|+.|+++-|++. .+|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lp--------- 95 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILP--------- 95 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCc---------
Confidence 3344445666666666666 55666667777777777777776 56666666666666666666655 333
Q ss_pred cEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCc-cCCCcccccccccccccccc
Q 001706 365 EGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLWTTFNLSSLMLSD 443 (1024)
Q Consensus 365 ~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 443 (1024)
..|+.++.|++|||++|++. ..+|..|+.+..|..|+|++
T Consensus 96 ---------------------------------------rgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~d 136 (264)
T KOG0617|consen 96 ---------------------------------------RGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGD 136 (264)
T ss_pred ---------------------------------------cccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcC
Confidence 44444455555555555543 24555555555555555555
Q ss_pred CcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccc
Q 001706 444 NTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 523 (1024)
Q Consensus 444 N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 523 (1024)
|.+. .+|..++.+++|+.|.+.+|.+- .+|.+
T Consensus 137 ndfe-----------------------------------------------~lp~dvg~lt~lqil~lrdndll-~lpke 168 (264)
T KOG0617|consen 137 NDFE-----------------------------------------------ILPPDVGKLTNLQILSLRDNDLL-SLPKE 168 (264)
T ss_pred CCcc-----------------------------------------------cCChhhhhhcceeEEeeccCchh-hCcHH
Confidence 5554 66777788888888888888887 78888
Q ss_pred cccccccCeEeccCccccCccchhhhhcc---ccceecccCCcCCCCCCCcc
Q 001706 524 IVSWTSLNNLNLARNELSGEIPKAIGSLL---VMVSLDLSGNQFSGEIPPEI 572 (1024)
Q Consensus 524 ~~~l~~L~~L~L~~N~l~g~ip~~~~~l~---~L~~L~ls~N~l~g~ip~~~ 572 (1024)
++.++.|++|++.+|+|+ .+|+.++++. +=+.+.+.+|.....|...+
T Consensus 169 ig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf 219 (264)
T KOG0617|consen 169 IGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIAEQF 219 (264)
T ss_pred HHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHHHH
Confidence 888999999999999998 8888888774 33567788888875555443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-18 Score=176.84 Aligned_cols=142 Identities=19% Similarity=0.144 Sum_probs=110.0
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhh-----------------------HHHHHHHHHHHHHHhccccCc
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-----------------------QKLEKEFIAEIEILGTIRHAN 752 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~l~hpn 752 (1024)
...||+|++|.||+|.+. +|+.||||+++...... ......+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999987 89999999986542110 011223568999999999998
Q ss_pred eeeEEEEEecCCceEEEEeccCCCCHHHH-hccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEe
Q 001706 753 IVKLWCCISSENSKLLVYEYMENQSLDRW-LHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIH 830 (1024)
Q Consensus 753 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH 830 (1024)
+.....+... ..++||||++++++... +.. ..++.....+++.|++.++.++|+ . ||+|
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--------------~~~~~~~~~~i~~~l~~~l~~lH~~~---givH 141 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--------------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVH 141 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhh--------------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEec
Confidence 7544433332 24899999998755432 321 235677889999999999999998 7 9999
Q ss_pred CCCCCCCEEECCCCcEEEeccccceecc
Q 001706 831 RDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 831 ~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
|||||+||+++ ++.++|+|||+|+...
T Consensus 142 rDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 142 GDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999 8899999999998753
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-19 Score=209.63 Aligned_cols=252 Identities=23% Similarity=0.246 Sum_probs=181.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEE
Q 001706 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR-KLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 770 (1024)
Q Consensus 692 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 770 (1024)
++...+.+|++.|=+|.+|++. .|. |+||++-+.. ..+-+...+-.+|++ ...++|||++++..+-...+..|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 5566778999999999999885 454 9999885432 222233334444555 45568999999987766777889999
Q ss_pred eccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEec
Q 001706 771 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850 (1024)
Q Consensus 771 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 850 (1024)
+|+. -+|+|.+..++ -+...+.+.|+.|++.|+..+|.. ||+|||||.+|||+++-..+.|+|
T Consensus 101 qyvk-hnLyDRlSTRP-------------FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtD 163 (1431)
T KOG1240|consen 101 QYVK-HNLYDRLSTRP-------------FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTD 163 (1431)
T ss_pred HHHh-hhhhhhhccch-------------HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhc
Confidence 9996 68999888644 366777888999999999999999 999999999999999999999999
Q ss_pred ccccee-cccCCCCceecccccC----cccCchhhccCC----------C-CCCCCcchhHHHHHHHHHhCCCCCCCCCC
Q 001706 851 FGLAKM-LAKQGEPHTMSAVAGS----FGYFAPEYAYTT----------K-VNEKIDIYSFGVVLLELVTGKEANYGDEH 914 (1024)
Q Consensus 851 Fgla~~-~~~~~~~~~~~~~~gt----~~y~aPE~~~~~----------~-~~~~sDvwslGvil~el~tg~~p~~~~~~ 914 (1024)
|..-+. |-+++++...+.+..| ..|.|||.+... . .+++-||||+||++.|+++-+.|.+.-
T Consensus 164 FAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-- 241 (1431)
T KOG1240|consen 164 FASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-- 241 (1431)
T ss_pred ccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--
Confidence 987653 3344455554444433 479999976541 1 567899999999999999965443311
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
.++. +.........+..-..+.+ ..+..++..|++.||++|.++.+.++.-
T Consensus 242 SQL~----aYr~~~~~~~e~~Le~Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 242 SQLL----AYRSGNADDPEQLLEKIED-------VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHH----hHhccCccCHHHHHHhCcC-------ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 0111 1111111122222222222 3677899999999999999999999863
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-18 Score=194.18 Aligned_cols=216 Identities=25% Similarity=0.353 Sum_probs=164.3
Q ss_pred HhccccCceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccC
Q 001706 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC 824 (1024)
Q Consensus 745 l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 824 (1024)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.... ..++|.....++++|+.||+|+|..
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~------------~~~d~~F~~s~~rdi~~Gl~ylh~s- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED------------IKLDYFFILSFIRDISKGLAYLHNS- 67 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc------------cCccHHHHHHHHHHHHHHHHHHhcC-
Confidence 356889999999999999999999999999999999998743 3589999999999999999999987
Q ss_pred CCce-EeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecccccCcccCchhhccCCC-------CCCCCcchhHH
Q 001706 825 TPQI-IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-------VNEKIDIYSFG 896 (1024)
Q Consensus 825 ~~~i-vH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDvwslG 896 (1024)
+| +|+.++++|.++|....+|+.|||+.................-..-|.|||.++... .+.+.||||||
T Consensus 68 --~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ 145 (484)
T KOG1023|consen 68 --PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFG 145 (484)
T ss_pred --cceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHH
Confidence 44 899999999999999999999999987764311112222223446799999988642 46679999999
Q ss_pred HHHHHHHhCCCCCCCCCCcchHHHHHHHhhc--cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 897 VVLLELVTGKEANYGDEHTSLAEWAWRHYAE--EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 897 vil~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
++++|+++++.||...........+...... ..+.... +... .+..+++..++..||.++|++||+++++-.
T Consensus 146 ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~----i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 146 IIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPS----IELL--NELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcc----hhhh--hhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9999999999999764333222222221111 1111111 1100 133347899999999999999999999999
Q ss_pred HHhhcCC
Q 001706 975 ILRRCCP 981 (1024)
Q Consensus 975 ~L~~~~~ 981 (1024)
.++.+..
T Consensus 220 ~~~~~~~ 226 (484)
T KOG1023|consen 220 KLLTINK 226 (484)
T ss_pred hhhhhcc
Confidence 8888764
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-18 Score=179.40 Aligned_cols=256 Identities=23% Similarity=0.297 Sum_probs=173.2
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCc-----------------------------------EEEEEEeccchh--hhH
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGE-----------------------------------FVAVKRIWNNRK--LNQ 732 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~-----------------------------------~vavK~~~~~~~--~~~ 732 (1024)
+++|++.+.||+|+.+.||.|+...+|. +.|+|.+..-.. .+.
T Consensus 156 iddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~ 235 (598)
T KOG4158|consen 156 IDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDA 235 (598)
T ss_pred hhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchH
Confidence 5789999999999999999887543111 246776543221 122
Q ss_pred HHHHHHHHHHHH--------------Hhc--------cccCceeeEEEEEec---------------------------C
Q 001706 733 KLEKEFIAEIEI--------------LGT--------IRHANIVKLWCCISS---------------------------E 763 (1024)
Q Consensus 733 ~~~~~~~~E~~~--------------l~~--------l~hpniv~l~~~~~~---------------------------~ 763 (1024)
...+.+.+|.-- .+. -+|||||++..+|.+ .
T Consensus 236 ~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~ 315 (598)
T KOG4158|consen 236 HILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEP 315 (598)
T ss_pred HHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCC
Confidence 333444444211 111 159999999877633 2
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE--C
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL--D 841 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill--~ 841 (1024)
...|+||..++ .+|..|+..+. .+.....-|..|+++|+.|||.+ ||.|||+|++||++ |
T Consensus 316 ~tlylvMkrY~-~tLr~yl~~~~--------------~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~Eld 377 (598)
T KOG4158|consen 316 KTLYLVMKRYR-QTLREYLWTRH--------------RSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELD 377 (598)
T ss_pred ceEEEehhcch-hhHHHHHhcCC--------------CchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEec
Confidence 34589999885 79999998654 34456677899999999999999 99999999999999 3
Q ss_pred CCC--cEEEeccccceecccCC----CCceecccccCcccCchhhccCCC------CCCCCcchhHHHHHHHHHhCCCCC
Q 001706 842 SEF--KAKIADFGLAKMLAKQG----EPHTMSAVAGSFGYFAPEYAYTTK------VNEKIDIYSFGVVLLELVTGKEAN 909 (1024)
Q Consensus 842 ~~~--~~kl~DFgla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslGvil~el~tg~~p~ 909 (1024)
+|+ ..+|+|||.+---...+ .........|.-.-||||+....+ ...|+|.|+.|.+.||++....||
T Consensus 378 dD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPF 457 (598)
T KOG4158|consen 378 DDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPF 457 (598)
T ss_pred CCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcc
Confidence 443 47899999874321111 111223345778899999875432 235899999999999999999999
Q ss_pred CCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001706 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976 (1024)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 976 (1024)
+...+..+... .+.+. .....+..+++.+.+++...++.||++|++..-....+
T Consensus 458 Y~rGem~L~~r---~Yqe~----------qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 458 YKRGEMLLDTR---TYQES----------QLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred cccchheechh---hhhhh----------hCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 87432211110 11111 11233455667889999999999999999876655544
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-20 Score=206.55 Aligned_cols=274 Identities=23% Similarity=0.266 Sum_probs=146.6
Q ss_pred EEeCCCccc-ccCCccccCCCceeEEEccCCCCCCC----CCccccCCCCCCcccccCccccC------CCccccccCCC
Q 001706 78 ISLRHKDIT-QKIPPIICDLKNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDLSQNYFVG------PIPSDIDRISG 146 (1024)
Q Consensus 78 l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~ 146 (1024)
|+|..++++ ......+..+.+|+.|+++++.++.. ++..+...+.|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 455555555 33344455566677777777776532 45556666667777777776652 22344555667
Q ss_pred CcEEeCCCcccccccccccccccc---cceEeeeccccCC----CCCcccCCC-CCCcEEecccCCCCCC--CCcccccc
Q 001706 147 LQCIDLGGNNFSGDIPRSIGRLSE---LQTLYLYMNEFNG----TFPKEIGDL-SNLEVLGLAYNSNFKP--AMIPIEFG 216 (1024)
Q Consensus 147 L~~L~Ls~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~ls~N~~~~~--~~~~~~~~ 216 (1024)
|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+... ..++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 777777777776555555555554 7777777776652 122233444 5566666665543311 11222333
Q ss_pred ccCCCcEEEccCCccccc----CchhhcCCCCCCeeeccCCcCCCCc----ccccCCCCCCcEEEccCCccCCCCCcchh
Q 001706 217 MLKKLKTLWMTEANLIGE----IPEAMSNLSSLEILALNGNHLEGAI----PSGLFLLNNLTQLFLYDNILSGEIPSSVE 288 (1024)
Q Consensus 217 ~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 288 (1024)
.+++|++|++++|++.+. ++..+..+++|++|++++|.+++.. +..+..+++
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~-------------------- 222 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS-------------------- 222 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCC--------------------
Confidence 444455555554444421 2222333344555555554443221 122233344
Q ss_pred hcccccccCCCCcCCCCCCcccC-----CCcccceeecccccccc----cCCccCCCccccceeeccccccccc----CC
Q 001706 289 ALKLTDIDLSMNNLTGSIPEEFG-----KLKNLQLLGLFSNHLSG----EVPASIGKIPALKKFKVFNNSLSGV----LP 355 (1024)
Q Consensus 289 ~~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p 355 (1024)
|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. +.
T Consensus 223 ---L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~ 299 (319)
T cd00116 223 ---LEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLA 299 (319)
T ss_pred ---CCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHH
Confidence 55555555555432222221 23667777777777752 2333455557777888888877743 44
Q ss_pred ccccCC-CCCcEEEeecCCC
Q 001706 356 PEIGLH-SALEGFEVSTNQF 374 (1024)
Q Consensus 356 ~~~~~~-~~L~~L~ls~N~l 374 (1024)
..+... +.|++|++.+|++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 300 ESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHhhcCCchhhcccCCCCC
Confidence 445555 6788888888764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.6e-20 Score=207.28 Aligned_cols=274 Identities=22% Similarity=0.240 Sum_probs=171.9
Q ss_pred EEEccCCCCC-CCCCccccCCCCCCcccccCccccCC----CccccccCCCCcEEeCCCccccc------cccccccccc
Q 001706 101 TIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQNYFVGP----IPSDIDRISGLQCIDLGGNNFSG------DIPRSIGRLS 169 (1024)
Q Consensus 101 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~ 169 (1024)
.|+|..+.++ +.....+..+.+|++|++++|.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4778888887 44566677788889999998888543 45556677778888888887762 2344566677
Q ss_pred ccceEeeeccccCCCCCcccCCCCC---CcEEecccCCCCCC--CCcccccccc-CCCcEEEccCCccccc----Cchhh
Q 001706 170 ELQTLYLYMNEFNGTFPKEIGDLSN---LEVLGLAYNSNFKP--AMIPIEFGML-KKLKTLWMTEANLIGE----IPEAM 239 (1024)
Q Consensus 170 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~ls~N~~~~~--~~~~~~~~~l-~~L~~L~L~~n~l~~~----~p~~l 239 (1024)
+|++|++++|.+.+..+..+..+.+ |++|++++|.+... ..+...+..+ ++|++|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888887655655555554 77777777653210 0112223333 4555555555554421 22233
Q ss_pred cCCCCCCeeeccCCcCCCC----cccccCCCCCCcEEEccCCccCCCCCcchhhcccccccCCCCcCCCC----CCcccC
Q 001706 240 SNLSSLEILALNGNHLEGA----IPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGS----IPEEFG 311 (1024)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~----~p~~~~ 311 (1024)
..+.+|++|++++|.+++. ++..+..+++ |+.|+|++|.+++. ++..+.
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~-----------------------L~~L~L~~n~i~~~~~~~l~~~~~ 218 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCN-----------------------LEVLDLNNNGLTDEGASALAETLA 218 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCC-----------------------CCEEeccCCccChHHHHHHHHHhc
Confidence 3444445555544444421 1122222334 55555555555432 334566
Q ss_pred CCcccceeecccccccccCCccCCC-----ccccceeeccccccc----ccCCccccCCCCCcEEEeecCCCCCC----C
Q 001706 312 KLKNLQLLGLFSNHLSGEVPASIGK-----IPALKKFKVFNNSLS----GVLPPEIGLHSALEGFEVSTNQFSGP----L 378 (1024)
Q Consensus 312 ~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~----~~~p~~~~~~~~L~~L~ls~N~l~~~----~ 378 (1024)
.+++|++|++++|++++.....+.. .+.|++|++++|.++ ..+...+..+++|+++++++|.++.. +
T Consensus 219 ~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 219 SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 7899999999999998644433332 379999999999997 23345566778999999999999965 3
Q ss_pred Chhhhcc-ccccceecccCc
Q 001706 379 PENLCAG-GVLQGVVAFENN 397 (1024)
Q Consensus 379 p~~~~~~-~~L~~l~l~~n~ 397 (1024)
...+... ..+.++++.+|.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 299 AESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHhhcCCchhhcccCCCC
Confidence 3333333 678888877764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=196.88 Aligned_cols=248 Identities=17% Similarity=0.148 Sum_probs=180.8
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc---cCceeeEEEEEecCCceE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR---HANIVKLWCCISSENSKL 767 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~ 767 (1024)
+.|.+.+.||+|+||+||+|.... |+.||+|+-+....+.-....+ ++.+|+ -+-|+.+..++.-.+..+
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q------~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQ------VMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHH------HHHhhchhhhcchHHHHHHHccCCcce
Confidence 457788899999999999999876 9999999987665543222222 333444 234444544455567789
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECC-----
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS----- 842 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----- 842 (1024)
+|+||.+.|+|.+++... ..++|...+.++.|+++.+++||.. +||||||||+|+++..
T Consensus 771 lv~ey~~~Gtlld~~N~~-------------~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~ 834 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTN-------------KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICAD 834 (974)
T ss_pred eeeeccccccHHHhhccC-------------CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCC
Confidence 999999999999999843 3589999999999999999999999 9999999999999942
Q ss_pred --CCcEEEeccccceecccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHH
Q 001706 843 --EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920 (1024)
Q Consensus 843 --~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~ 920 (1024)
...++|+|||.+..+.--.+.......++|-.+-.+|...+..++++.|-|.++.+++-|+.|+..-..++
T Consensus 835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~g------- 907 (974)
T KOG1166|consen 835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKNG------- 907 (974)
T ss_pred CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcCC-------
Confidence 24689999999976654444556777889999999999999999999999999999999999975321000
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 001706 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981 (1024)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 981 (1024)
....++..++.-... ....++...+++.|=..=|...++...|++...
T Consensus 908 ----------~~~~~~~~~~Ry~~~---~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 908 ----------SSWMVKTNFPRYWKR---DMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred ----------cceeccccchhhhhH---HHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 001111111111111 233455556666443444788888888777654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.9e-17 Score=167.12 Aligned_cols=137 Identities=15% Similarity=0.246 Sum_probs=105.7
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-----ccCceeeEEEEEecCC---
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-----RHANIVKLWCCISSEN--- 764 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~--- 764 (1024)
++..+.||+|+||.||. ++.++.. +||++.... ....+.+.+|+++++.+ .||||+++++++.+..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 45567899999999995 6555554 799885432 12346799999999999 5799999999998763
Q ss_pred ceE-EEEec--cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhh-ccccccCCCceEeCCCCCCCEEE
Q 001706 765 SKL-LVYEY--MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL-CYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 765 ~~~-lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
..+ +|+|| +.+++|.+++.... +++. ..++.|++.++ +|||++ +|+||||||+||++
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~~--------------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl 138 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQCR--------------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILC 138 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHccc--------------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEE
Confidence 333 78999 55799999996421 3333 35677888777 999999 99999999999999
Q ss_pred CC----CCcEEEeccccc
Q 001706 841 DS----EFKAKIADFGLA 854 (1024)
Q Consensus 841 ~~----~~~~kl~DFgla 854 (1024)
+. ++.++|+||+.+
T Consensus 139 ~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 139 QRISESEVIPVVCDNIGE 156 (210)
T ss_pred eccCCCCCcEEEEECCCC
Confidence 74 347999995443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-17 Score=194.30 Aligned_cols=230 Identities=23% Similarity=0.281 Sum_probs=162.0
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
..+|+.++.|-.|+||.||.++++.+.+++|.|+-+.. -+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~---------lilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN---------LILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc---------hhhhc--cccccCCccee---------------
Confidence 35788899999999999999999888889999643111 11110 22233344443
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
|+-.+.++..+. ++. +.+.+++|+|+. +|+|||+||+|++++.=|.+|+.
T Consensus 136 ------gDc~tllk~~g~-------------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlT 185 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGP-------------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLT 185 (1205)
T ss_pred ------chhhhhcccCCC-------------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeeccccccc
Confidence 444444443322 221 227899999998 99999999999999999999999
Q ss_pred ccccceecccCCC-------------CceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 001706 850 DFGLAKMLAKQGE-------------PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 916 (1024)
Q Consensus 850 DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~ 916 (1024)
|||++++...... .......+||+.|.|||++....|....|+|++|+|+||.+-|+.||+++..++
T Consensus 186 DfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee 265 (1205)
T KOG0606|consen 186 DFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 265 (1205)
T ss_pred chhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH
Confidence 9999875321100 011234579999999999999999999999999999999999999999987766
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCcCCcccCCCCCC
Q 001706 917 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDS 996 (1024)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~ 996 (1024)
++..+...... -...|+.-=|-++++++.|-+..|..+.+.. .+-+++.
T Consensus 266 lfg~visd~i~------------------------------wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk~ 314 (1205)
T KOG0606|consen 266 LFGQVISDDIE------------------------------WPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVKQ 314 (1205)
T ss_pred HHhhhhhhhcc------------------------------ccccCcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhhh
Confidence 65544332111 0112333335567777777777777766655 7777888
Q ss_pred CCCcCccccccc
Q 001706 997 APLLGTAGYLFG 1008 (1024)
Q Consensus 997 ~~~~~~~~~~~~ 1008 (1024)
|+||. +-+|.
T Consensus 315 h~ff~--~LDw~ 324 (1205)
T KOG0606|consen 315 HGFFQ--LLDWK 324 (1205)
T ss_pred cccee--ecccc
Confidence 88888 67777
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=167.60 Aligned_cols=144 Identities=18% Similarity=0.162 Sum_probs=110.8
Q ss_pred CCccceeeecCcEEEEEEE-EcCCCcEEEEEEeccchhh-------------------h--HHHHHHHHHHHHHHhcccc
Q 001706 693 LTESNLIGSGGSGQVYRID-INGAGEFVAVKRIWNNRKL-------------------N--QKLEKEFIAEIEILGTIRH 750 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~-------------------~--~~~~~~~~~E~~~l~~l~h 750 (1024)
|.+.+.||+|++|.||+|. +..+|+.||||+++..... + ......+.+|++.++++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5677899999999999998 6668999999998643210 0 0122356789999999975
Q ss_pred --CceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCc-
Q 001706 751 --ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ- 827 (1024)
Q Consensus 751 --pniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~- 827 (1024)
..+.+++++ ...++||||+++++|..+..... .........++.|++.+++|||+. +
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-------------~~~~~~~~~i~~qi~~~l~~LH~~---g~ 169 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-------------EPEEEEEFELYDDILEEMRKLYKE---GE 169 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCcccccccccC-------------CcchHHHHHHHHHHHHHHHHHHhc---CC
Confidence 334455543 23589999999988876542211 234456678999999999999998 9
Q ss_pred eEeCCCCCCCEEECCCCcEEEeccccceec
Q 001706 828 IIHRDVKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 828 ivH~Dlk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
|+||||||+||+++ ++.++++|||.|...
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999999 889999999998754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-17 Score=178.23 Aligned_cols=176 Identities=30% Similarity=0.443 Sum_probs=133.6
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 843 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 843 (1024)
.+.|+.|++|...+|.+|+..+... ...+|.....++.|++.|++| + +.+|||+||.||++..+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~----------e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d 392 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG----------EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDD 392 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc----------cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccc
Confidence 3578999999999999999866542 457788999999999999999 5 89999999999999999
Q ss_pred CcEEEeccccceecccCC----CCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC-CCCCCCCCCcchH
Q 001706 844 FKAKIADFGLAKMLAKQG----EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG-KEANYGDEHTSLA 918 (1024)
Q Consensus 844 ~~~kl~DFgla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg-~~p~~~~~~~~~~ 918 (1024)
..+||+|||+........ ....++...||..||+||.+.+..|+.++||||+|++|+|++.- ..++.
T Consensus 393 ~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------- 464 (516)
T KOG1033|consen 393 DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------- 464 (516)
T ss_pred hhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH--------
Confidence 999999999998765543 23456678899999999999999999999999999999999972 11111
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 001706 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972 (1024)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 972 (1024)
......+.-+..+. +.....-+.=+.++..++...|.+||++.+.
T Consensus 465 --------r~~t~~d~r~g~ip-~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 465 --------RIATLTDIRDGIIP-PEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred --------HHHhhhhhhcCCCC-hHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 01111111111121 1111122344689999999999999955544
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-16 Score=187.41 Aligned_cols=149 Identities=32% Similarity=0.559 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCC----CCCcceeeCC------CEEEEEeCCCcccccCCccccCCCce
Q 001706 30 QSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPC----DWPEITCTFN------SVTGISLRHKDITQKIPPIICDLKNL 99 (1024)
Q Consensus 30 ~~~~~~~~~aL~~~k~~~~~~~~l~sw~~~~~~c----~w~gv~C~~~------~v~~l~l~~~~l~~~~~~~~~~l~~L 99 (1024)
..+.++|..||+++|+++..+.. .+|.. +.|| .|.||.|+.+ .|+.|+|+++++.|.+|+.++.+++|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 34677899999999999976543 47863 3332 7999999632 25555555555555555555555555
Q ss_pred eEEEccCCCCCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccc-cccceEeeec
Q 001706 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRL-SELQTLYLYM 178 (1024)
Q Consensus 100 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~ 178 (1024)
+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..++.+ .++..+++.+
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecC
Confidence 555555555555555555555555555555555555555555555555555555555555555544432 2344444444
Q ss_pred cc
Q 001706 179 NE 180 (1024)
Q Consensus 179 N~ 180 (1024)
|.
T Consensus 525 N~ 526 (623)
T PLN03150 525 NA 526 (623)
T ss_pred Cc
Confidence 43
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=180.18 Aligned_cols=139 Identities=21% Similarity=0.292 Sum_probs=111.5
Q ss_pred hCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccc--hh---hhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCc
Q 001706 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNN--RK---LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 765 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~---~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 765 (1024)
..|...+.||+|+||+||+|..... .+++|+.... .. ......+.+.+|+++++.++|++++....++.+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 4456678999999999999987543 3444432111 11 111234678999999999999999888777777778
Q ss_pred eEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc
Q 001706 766 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 845 (1024)
Q Consensus 766 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 845 (1024)
.++||||+++++|.+++. ....++.+++.+++|||+. +++|||+||+||++ .++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~---------------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~ 465 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE---------------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDR 465 (535)
T ss_pred CEEEEEecCCCcHHHHHH---------------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCc
Confidence 899999999999998775 2357899999999999998 99999999999999 6789
Q ss_pred EEEecccccee
Q 001706 846 AKIADFGLAKM 856 (1024)
Q Consensus 846 ~kl~DFgla~~ 856 (1024)
++|+|||+++.
T Consensus 466 ~~liDFGla~~ 476 (535)
T PRK09605 466 LYLIDFGLGKY 476 (535)
T ss_pred EEEEeCccccc
Confidence 99999999875
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-15 Score=159.35 Aligned_cols=137 Identities=23% Similarity=0.329 Sum_probs=113.6
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh-----hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
+.||+|++|.||+|.. .+..|+||+....... .......+.+|++++..++|+++.....++.+....++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 5677999976533211 11223568899999999999998877777777778899999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++|++|.+++... .+ .+..++.+++.+++++|+. +++|||++|.||+++ ++.++++||
T Consensus 80 ~~~G~~L~~~~~~~----------------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf 138 (211)
T PRK14879 80 YIEGEPLKDLINSN----------------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDF 138 (211)
T ss_pred EeCCcCHHHHHHhc----------------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEEC
Confidence 99999999988632 12 7789999999999999998 999999999999999 789999999
Q ss_pred cccee
Q 001706 852 GLAKM 856 (1024)
Q Consensus 852 gla~~ 856 (1024)
|.+..
T Consensus 139 ~~a~~ 143 (211)
T PRK14879 139 GLAEF 143 (211)
T ss_pred CcccC
Confidence 98764
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-15 Score=155.98 Aligned_cols=133 Identities=23% Similarity=0.298 Sum_probs=106.6
Q ss_pred eeeecCcEEEEEEEEcCCCcEEEEEEeccchhh-----hHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEec
Q 001706 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 698 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 772 (1024)
.||+|+||.||+|.. .+..|++|+....... ......++.+|+++++.++|+++.....++.+....++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 4678999986432111 112246788999999999988765554455566678999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
++|++|.+++.... . .++.+++.+++++|+. +++|||++|+||+++ ++.++++|||
T Consensus 79 ~~g~~l~~~~~~~~--------------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg 134 (199)
T TIGR03724 79 IEGKPLKDVIEEGN--------------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFG 134 (199)
T ss_pred ECCccHHHHHhhcH--------------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECC
Confidence 99999998875321 0 7899999999999998 999999999999999 8899999999
Q ss_pred ccee
Q 001706 853 LAKM 856 (1024)
Q Consensus 853 la~~ 856 (1024)
.+..
T Consensus 135 ~a~~ 138 (199)
T TIGR03724 135 LGKY 138 (199)
T ss_pred CCcC
Confidence 9865
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-15 Score=155.78 Aligned_cols=138 Identities=22% Similarity=0.136 Sum_probs=107.4
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhh-------------------HHHHHHHHHHHHHHhccccC--
Q 001706 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-------------------QKLEKEFIAEIEILGTIRHA-- 751 (1024)
Q Consensus 693 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------------------~~~~~~~~~E~~~l~~l~hp-- 751 (1024)
|...+.||+|+||.||++... +++.||||+++...... ......+.+|+.++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 566788999999999999875 78999999875432100 01123477899999999877
Q ss_pred ceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeC
Q 001706 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 831 (1024)
Q Consensus 752 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 831 (1024)
.+.+.++ ....++||||+++++|.+.... .....++.+++.++.++|+. +|+||
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------------------~~~~~~~~~i~~~l~~lh~~---gi~H~ 149 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL-------------------EDPEEVLDEILEEIVKAYKH---GIIHG 149 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc-------------------ccHHHHHHHHHHHHHHHHHC---CCCcC
Confidence 4444443 2456899999999998764321 23457889999999999998 99999
Q ss_pred CCCCCCEEECCCCcEEEeccccceec
Q 001706 832 DVKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 832 Dlk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
||+|+||++++++.++|+|||.+...
T Consensus 150 Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 150 DLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcccEEEcCCCcEEEEECCccccC
Confidence 99999999999999999999998654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-14 Score=172.86 Aligned_cols=93 Identities=34% Similarity=0.630 Sum_probs=64.8
Q ss_pred cceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccC
Q 001706 482 LIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSG 561 (1024)
Q Consensus 482 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~ 561 (1024)
++.|+|++|.++|.+|..++.+++|+.|+|++|.|+|.+|..++.+++|+.|||++|+|+|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 55666677777666776677777777777777777767776677777777777777777777777777777777777777
Q ss_pred CcCCCCCCCcccc
Q 001706 562 NQFSGEIPPEIGQ 574 (1024)
Q Consensus 562 N~l~g~ip~~~~~ 574 (1024)
|+|+|.+|..++.
T Consensus 500 N~l~g~iP~~l~~ 512 (623)
T PLN03150 500 NSLSGRVPAALGG 512 (623)
T ss_pred CcccccCChHHhh
Confidence 7777777766554
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-14 Score=144.98 Aligned_cols=138 Identities=24% Similarity=0.215 Sum_probs=98.6
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHH---------------------HHHHHHHHHhccccC--c
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEK---------------------EFIAEIEILGTIRHA--N 752 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~hp--n 752 (1024)
.+.||+|+||+||+|.+. +++.||||++............ ....|.+.+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999886 7899999988653221111111 124566666666443 3
Q ss_pred eeeEEEEEecCCceEEEEeccCCCCHHHH-hccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccc-cCCCceEe
Q 001706 753 IVKLWCCISSENSKLLVYEYMENQSLDRW-LHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIH 830 (1024)
Q Consensus 753 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH 830 (1024)
+.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|. . +|+|
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--------------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH 138 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--------------LL-EDPEELYDQILELMRKLYREA---GLVH 138 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh--------------hc-ccHHHHHHHHHHHHHHHhhcc---CcCc
Confidence 4445443 246899999998553211 11000 11 5677899999999999998 7 9999
Q ss_pred CCCCCCCEEECCCCcEEEeccccceec
Q 001706 831 RDVKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 831 ~Dlk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
|||||+||+++ ++.++++|||.+...
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccc
Confidence 99999999999 899999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.1e-14 Score=136.78 Aligned_cols=135 Identities=23% Similarity=0.239 Sum_probs=113.0
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcccc--CceeeEEEEEecCCceEEEEec
Q 001706 695 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIVKLWCCISSENSKLLVYEY 772 (1024)
Q Consensus 695 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv~e~ 772 (1024)
+.+.||+|.++.||++...+ ..+++|+...... ...+.+|+.+++.++| +++++++++....+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35789999999999999853 6799998854322 4678899999999976 5999999988888889999999
Q ss_pred cCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 773 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 773 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
++++.+..+ +......++.+++++++++|.....+++|+|++|+||+++.++.++++|||
T Consensus 75 ~~g~~~~~~--------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~ 134 (155)
T cd05120 75 IEGETLDEV--------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWE 134 (155)
T ss_pred cCCeecccC--------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecc
Confidence 988766532 345667889999999999998644579999999999999999999999999
Q ss_pred ccee
Q 001706 853 LAKM 856 (1024)
Q Consensus 853 la~~ 856 (1024)
.+..
T Consensus 135 ~~~~ 138 (155)
T cd05120 135 YAGY 138 (155)
T ss_pred cccC
Confidence 8864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-13 Score=146.20 Aligned_cols=138 Identities=18% Similarity=0.243 Sum_probs=105.6
Q ss_pred cceee-ecCcEEEEEEEEcCCCcEEEEEEeccchh----------hhHHHHHHHHHHHHHHhccccCce--eeEEEEEec
Q 001706 696 SNLIG-SGGSGQVYRIDINGAGEFVAVKRIWNNRK----------LNQKLEKEFIAEIEILGTIRHANI--VKLWCCISS 762 (1024)
Q Consensus 696 ~~~ig-~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~ 762 (1024)
...|| .|+.|+||.+... +..++||++..... .+......+.+|++++..++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 46788 9999999999874 67899998843211 112234578999999999998774 666666433
Q ss_pred C-Cc---eEEEEeccCC-CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCC
Q 001706 763 E-NS---KLLVYEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 837 (1024)
Q Consensus 763 ~-~~---~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 837 (1024)
. +. .++||||++| .+|.+++.... ++. ..+.+++.++++||+. ||+||||||.|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~--------------l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~N 172 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEAP--------------LSE----EQWQAIGQLIARFHDA---GVYHADLNAHN 172 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcCC--------------CCH----HHHHHHHHHHHHHHHC---CCCCCCCCchh
Confidence 2 22 2599999997 69998876421 222 2357899999999999 99999999999
Q ss_pred EEECCCCcEEEecccccee
Q 001706 838 ILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 838 ill~~~~~~kl~DFgla~~ 856 (1024)
||++.++.++|+|||.++.
T Consensus 173 ILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 173 ILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred EEEcCCCCEEEEECCCccc
Confidence 9999999999999998865
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.6e-15 Score=175.09 Aligned_cols=258 Identities=24% Similarity=0.243 Sum_probs=193.3
Q ss_pred hCCCccceeeecCcEEEEEEEEcC-CCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccc-cCceeeEEEEEecCCceEE
Q 001706 691 SSLTESNLIGSGGSGQVYRIDING-AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLL 768 (1024)
Q Consensus 691 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 768 (1024)
..|...+.||+|+|+.|-...... ....+|+|.+.... ...........|..+-+.+. |+|++.+++...+....++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 457777889999999999876643 34467777664432 22333456667888888886 9999999999999999999
Q ss_pred EEeccCCCCHHHHhc-cCccccccCCCCcccccCChHHHHHHHHHHHhhhcccc-ccCCCceEeCCCCCCCEEECCCC-c
Q 001706 769 VYEYMENQSLDRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEF-K 845 (1024)
Q Consensus 769 v~e~~~~gsL~~~l~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dlk~~Nill~~~~-~ 845 (1024)
+.+|..++++.+-+. ... ...+....-....|+..++.|+| +. ++.|||+||+|.+++..+ .
T Consensus 99 ~~~~s~g~~~f~~i~~~~~------------~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~ 163 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS------------TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSA 163 (601)
T ss_pred ccCcccccccccccccCCc------------cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCc
Confidence 999999999988773 221 12444556678899999999999 77 999999999999999999 9
Q ss_pred EEEeccccceeccc-CCCCceeccccc-CcccCchhhccCC-CCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHH
Q 001706 846 AKIADFGLAKMLAK-QGEPHTMSAVAG-SFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922 (1024)
Q Consensus 846 ~kl~DFgla~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 922 (1024)
.+++|||+|..+.. .+.........| ++.|+|||...+. ...+..|+||.|+++.-+.+|..|+............|
T Consensus 164 l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~ 243 (601)
T KOG0590|consen 164 LKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSW 243 (601)
T ss_pred ccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceee
Confidence 99999999998877 556666666778 9999999988874 45678999999999999999999987544332111111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
..... ...............++..+++..+|+.|.+..++..
T Consensus 244 ~~~~~----------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 244 KSNKG----------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccccc----------ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 11100 0001112222345677888899999999999888764
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-15 Score=163.86 Aligned_cols=68 Identities=29% Similarity=0.503 Sum_probs=43.2
Q ss_pred CcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhh
Q 001706 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLC 383 (1024)
Q Consensus 313 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 383 (1024)
+.--...||+.|++. ++|..++.+..|+.+.|..|.+. .+|..++++..|++|||+.|+++ .+|..+|
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC 141 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLC 141 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhh
Confidence 444456677777776 67777777777777777777766 45666666666666666666665 3444333
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.8e-15 Score=163.70 Aligned_cols=193 Identities=26% Similarity=0.418 Sum_probs=139.2
Q ss_pred CCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccc
Q 001706 361 HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLM 440 (1024)
Q Consensus 361 ~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 440 (1024)
+.--...||+.|++. .+|..+|.+-.|..+.++.|.+. .+|..+.++..|.+|||+.|+++ .+|..++.+
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l------- 143 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL------- 143 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-------
Confidence 334456678888877 56666665555555555555444 44555555555555555555555 444444433
Q ss_pred cccCcccCCCCcccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCC
Q 001706 441 LSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKL 520 (1024)
Q Consensus 441 Ls~N~i~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 520 (1024)
-|+.|-+++|+++ .+|..++....|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+
T Consensus 144 ----------------pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~l 204 (722)
T KOG0532|consen 144 ----------------PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DL 204 (722)
T ss_pred ----------------cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hC
Confidence 3677777777777 66777888888999999999988 78888999999999999999998 67
Q ss_pred ccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCccccc-c---cccccccCC
Q 001706 521 PSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-K---LNTFNLSSN 585 (1024)
Q Consensus 521 p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l-~---l~~l~l~~N 585 (1024)
|.+++ .-.|..||+|.|+++ .||-.|.+|..|++|-|.+|.|. .-|..|+.. + ..+|+.+-.
T Consensus 205 p~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 205 PEELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred CHHHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 88888 456888999999998 89999999999999999999998 567777654 2 556666555
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.7e-13 Score=156.22 Aligned_cols=216 Identities=32% Similarity=0.443 Sum_probs=157.7
Q ss_pred CCCCcceeeCCCEE---EEEeCCCcccccCCccccCCCceeEEEccCCCCCCCCCccccCCC-CCCcccccCccccCCCc
Q 001706 63 CDWPEITCTFNSVT---GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCT-KLQNLDLSQNYFVGPIP 138 (1024)
Q Consensus 63 c~w~gv~C~~~~v~---~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p 138 (1024)
+.+.+..+...+.. .+++..+.+...+ ..+..++.++.|++.+|+++ .+|.....++ +|+.|++++|.+. .+|
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~ 156 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLP 156 (394)
T ss_pred cccccccccccCCCCCceeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhh
Confidence 55666666655544 4666666653333 23445578899999999888 7777777775 8999999999988 666
Q ss_pred cccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCcccccccc
Q 001706 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218 (1024)
Q Consensus 139 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l 218 (1024)
..++.+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|. ....+..+..+
T Consensus 157 ~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~---~~~~~~~~~~~ 231 (394)
T COG4886 157 SPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS---IIELLSSLSNL 231 (394)
T ss_pred hhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc---ceecchhhhhc
Confidence 77888899999999999998 77777778888999999999998 677766667778888888884 23355667777
Q ss_pred CCCcEEEccCCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhh
Q 001706 219 KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289 (1024)
Q Consensus 219 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 289 (1024)
.++..|.+.+|.+.. ++..+++++++++|++++|+++ .++. +..+.+++.|++++|.+...++.....
T Consensus 232 ~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 232 KNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred ccccccccCCceeee-ccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhcc
Confidence 777777766655543 2566777777888888888877 3444 777777788888777777666555443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.7e-13 Score=152.41 Aligned_cols=199 Identities=33% Similarity=0.469 Sum_probs=118.4
Q ss_pred EEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCC-CCcEEecccCCCCCCCCccccccccCCCcEEEcc
Q 001706 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS-NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMT 227 (1024)
Q Consensus 149 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~ 227 (1024)
.|+++.|.+... +..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|++
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i---------------------- 152 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKI---------------------- 152 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccch----------------------
Confidence 455555555322 223334455666666666665 4444444443 566666655541
Q ss_pred CCcccccCchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhc-ccccccCCCCcCCCCC
Q 001706 228 EANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSI 306 (1024)
Q Consensus 228 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~ 306 (1024)
..+|..+.++++|+.|++++|+++ .+|.....+++|+.|++++|+++. +|...... .|++|++++|.+. ..
T Consensus 153 -----~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~ 224 (394)
T COG4886 153 -----ESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-EL 224 (394)
T ss_pred -----hhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ec
Confidence 122234445555555555555555 444444455555556666665552 23322222 4667777777544 45
Q ss_pred CcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhh
Q 001706 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENL 382 (1024)
Q Consensus 307 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~ 382 (1024)
+..+.+++++..|.+.+|++. ..+..++.+++++.|++++|+++...+ ++.+.+|+.|++++|.+....|...
T Consensus 225 ~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 225 LSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred chhhhhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 667777788888888888876 446777788888888888888874433 7788888888888888876666543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-12 Score=144.94 Aligned_cols=254 Identities=20% Similarity=0.196 Sum_probs=186.8
Q ss_pred hhhCCCccceeee--cCcEEEEEEEE--cCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecC
Q 001706 689 ILSSLTESNLIGS--GGSGQVYRIDI--NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 763 (1024)
Q Consensus 689 ~~~~~~~~~~ig~--G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 763 (1024)
+...+...+.+|. |.+|.||.+.. ..++..+|+|+-+...... .....=.+|+...+.+ .|++.++.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p-~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP-LDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc-cccccccchhhcccccCccccccccCcccccC
Confidence 3456777888999 99999999988 7788999999854433211 2223445667666777 499999999999999
Q ss_pred CceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHh----hhccccccCCCceEeCCCCCCCEE
Q 001706 764 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ----GLCYMHHDCTPQIIHRDVKSSNIL 839 (1024)
Q Consensus 764 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlk~~Nil 839 (1024)
+..|+-+|++. .+|.++.+.... .++....+....+..+ |+.++|.. .++|-|+||.||+
T Consensus 191 ~~lfiqtE~~~-~sl~~~~~~~~~------------~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~ 254 (524)
T KOG0601|consen 191 GILFIQTELCG-ESLQSYCHTPCN------------FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIF 254 (524)
T ss_pred Ccceeeecccc-chhHHhhhcccc------------cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhhee
Confidence 99999999995 788888876543 2455566666667666 99999998 9999999999999
Q ss_pred ECCC-CcEEEeccccceecccCCCCceec---ccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCc
Q 001706 840 LDSE-FKAKIADFGLAKMLAKQGEPHTMS---AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915 (1024)
Q Consensus 840 l~~~-~~~kl~DFgla~~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~ 915 (1024)
...+ ...+++|||+...+.......... ...|...|++||... +.++.++|+|++|.+..|..++...+..+...
T Consensus 255 ~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 255 TTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred cccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 9999 899999999998886654322211 225778899999654 57889999999999999999998887654222
Q ss_pred chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001706 916 SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974 (1024)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 974 (1024)
. |....... +..++......++...+..+++.+|-.|++++.+..
T Consensus 334 ~-----W~~~r~~~---------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 334 S-----WSQLRQGY---------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred C-----cccccccc---------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1 11111111 111122222345555888999999999999888753
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.7e-12 Score=144.68 Aligned_cols=152 Identities=19% Similarity=0.218 Sum_probs=104.8
Q ss_pred hHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhH----------------------------------
Q 001706 687 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---------------------------------- 732 (1024)
Q Consensus 687 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---------------------------------- 732 (1024)
......|.. +.||.|++|.||+|+.. +|+.||||+.+......-
T Consensus 114 ~~~F~~fd~-~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~ 191 (437)
T TIGR01982 114 EELFAEFEE-KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFE 191 (437)
T ss_pred HHHHhhCCC-cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHH
Confidence 344555554 68999999999999986 689999999864321100
Q ss_pred ---HHHHHHHHHHHHHhccc-----cCceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChH
Q 001706 733 ---KLEKEFIAEIEILGTIR-----HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804 (1024)
Q Consensus 733 ---~~~~~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~ 804 (1024)
..+-+|.+|++.+.+++ ++++.-..-+.......++||||++|++|.++...... ..
T Consensus 192 ~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~------------~~--- 256 (437)
T TIGR01982 192 KTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA------------GL--- 256 (437)
T ss_pred HHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc------------CC---
Confidence 00113666777777663 34332111222234457999999999999887653211 11
Q ss_pred HHHHHHHHHHh-hhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 805 TRLQIAIGAAQ-GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 805 ~~~~i~~~i~~-~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
.+.+++.+++. .+..+|.. |++|+|++|.||+++.++.++++|||++..+.
T Consensus 257 ~~~~ia~~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 257 DRKALAENLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CHHHHHHHHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 23456666665 46778887 99999999999999999999999999997764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-12 Score=133.54 Aligned_cols=202 Identities=23% Similarity=0.305 Sum_probs=141.6
Q ss_pred HhccccCceeeEEEEEecCC-----ceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhcc
Q 001706 745 LGTIRHANIVKLWCCISSEN-----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCY 819 (1024)
Q Consensus 745 l~~l~hpniv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 819 (1024)
+-.+-|-|+|++..||.+.+ +..+++|||.-|++..+|++.++. +..+......+|+.||..||.|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~---------~~a~~~~~wkkw~tqIlsal~y 191 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN---------QKALFQKAWKKWCTQILSALSY 191 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh---------hhhhhHHHHHHHHHHHHhhhhh
Confidence 34456999999999986643 578999999999999999987763 3457778888999999999999
Q ss_pred ccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc--cCCCCceecccccCcccCchhhccCCCCCCCCcchhHHH
Q 001706 820 MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA--KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGV 897 (1024)
Q Consensus 820 LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv 897 (1024)
||+. .|.|+|+++..+-|++..+|-+|++--.-..... ............+-++|.+||+-.....+.++|||+||.
T Consensus 192 Lhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgm 270 (458)
T KOG1266|consen 192 LHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGM 270 (458)
T ss_pred hhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhH
Confidence 9985 8999999999999999999988885322111110 000111122234678999999888778888999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 001706 898 VLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973 (1024)
Q Consensus 898 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 973 (1024)
...||.-+..-....+.....+..... +-.++.. ..-...+.+|++..|..||+|++++
T Consensus 271 cAlemailEiq~tnseS~~~~ee~ia~----------~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 271 CALEMAILEIQSTNSESKVEVEENIAN----------VIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred HHHHHHHheeccCCCcceeehhhhhhh----------heeeccC-------ccccCcCcccccCCCCCCcchhhhh
Confidence 999999876543221111111111000 0001111 1113478899999999999999875
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.27 E-value=5e-12 Score=146.29 Aligned_cols=159 Identities=16% Similarity=0.148 Sum_probs=104.4
Q ss_pred CcchhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhh-------------------------------
Q 001706 683 GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN------------------------------- 731 (1024)
Q Consensus 683 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~------------------------------- 731 (1024)
+-.......+|+. +.||+|++|.||+|+..++|+.||||+.+......
T Consensus 112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v 190 (537)
T PRK04750 112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV 190 (537)
T ss_pred CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence 3344556777887 79999999999999998779999999996432100
Q ss_pred HHHH------HHHHHHHHHHhccc----cCceeeEEEEEec-CCceEEEEeccCCCCHHHHhccCccccccCCCCccccc
Q 001706 732 QKLE------KEFIAEIEILGTIR----HANIVKLWCCISS-ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800 (1024)
Q Consensus 732 ~~~~------~~~~~E~~~l~~l~----hpniv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~ 800 (1024)
++.. -++.+|+..+.+++ +...+.+-..+.+ ....++||||++|+.+.++-.-... ......
T Consensus 191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-------g~d~~~ 263 (537)
T PRK04750 191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-------GTDMKL 263 (537)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-------CCCHHH
Confidence 0111 23556666555553 3333433333322 4567899999999999874221110 000112
Q ss_pred CChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC----cEEEeccccceeccc
Q 001706 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF----KAKIADFGLAKMLAK 859 (1024)
Q Consensus 801 l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DFgla~~~~~ 859 (1024)
+.......++.|+. .. |++|+|+||.||+++.++ .++++|||++..+.+
T Consensus 264 la~~~v~~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 264 LAERGVEVFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHHHHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33333444555554 34 999999999999999988 999999999987643
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4e-11 Score=135.55 Aligned_cols=170 Identities=18% Similarity=0.205 Sum_probs=130.8
Q ss_pred EEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccc
Q 001706 709 RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRS 788 (1024)
Q Consensus 709 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~ 788 (1024)
.|..+.++.+|.|+..+.... .......+-++.++.++||+|+++++.++.++..|+|+|.+. .|..++++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-- 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-- 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH--
Confidence 466677888888888754332 334567777888999999999999999999999999999994 5777776432
Q ss_pred cccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCCceecc
Q 001706 789 LVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868 (1024)
Q Consensus 789 ~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~~~~~~ 868 (1024)
.....-.+.||+.||.+||+.| +++|++|...-|++++.|.+||++|.++........ ....
T Consensus 103 --------------~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~ 164 (690)
T KOG1243|consen 103 --------------KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKS 164 (690)
T ss_pred --------------HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--cccc
Confidence 3455667899999999998664 899999999999999999999999998865433221 1112
Q ss_pred cccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhC
Q 001706 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905 (1024)
Q Consensus 869 ~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg 905 (1024)
..--..|..|+.+.... -..|.|.||+++||++.|
T Consensus 165 ~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 165 LYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 22334577777655433 456999999999999999
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-11 Score=124.81 Aligned_cols=129 Identities=31% Similarity=0.429 Sum_probs=94.6
Q ss_pred CCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccccccccccCeEecc
Q 001706 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLA 536 (1024)
Q Consensus 457 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 536 (1024)
.|+.||||+|.|+ .+...+.-.+.++.|++|+|.|. .+- .+..|++|+.||||+|.|+ .+-.+-.++.+++.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4777777777776 45556666777888888888877 333 3777888888888888887 566666677888888888
Q ss_pred CccccCccchhhhhccccceecccCCcCCCCCC--Ccccccc-cccccccCCccccCCC
Q 001706 537 RNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP--PEIGQLK-LNTFNLSSNKLYGNIP 592 (1024)
Q Consensus 537 ~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip--~~~~~l~-l~~l~l~~N~l~g~~p 592 (1024)
+|.+.. -..++.|-+|..||+++|++.. +. ..||++. |+.+.|.+|++.+.+-
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~-ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEE-LDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhh-HHHhcccccccHHHHHhhcCCCccccch
Confidence 888852 2466777888888888888863 22 3567775 8888888888886443
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-12 Score=135.39 Aligned_cols=187 Identities=22% Similarity=0.272 Sum_probs=106.2
Q ss_pred CCCcEEeCCCcccccccccc----cccccccceEeeeccccCCCCC-------------cccCCCCCCcEEecccCCCCC
Q 001706 145 SGLQCIDLGGNNFSGDIPRS----IGRLSELQTLYLYMNEFNGTFP-------------KEIGDLSNLEVLGLAYNSNFK 207 (1024)
Q Consensus 145 ~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p-------------~~~~~l~~L~~L~ls~N~~~~ 207 (1024)
+.|++||||+|-|....+.. +.+++.|++|.|.+|.+.-.-. .-.+.-+.|+++..++|++..
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccccc
Confidence 45566666666555433332 2345566666666665541111 112334678888888887544
Q ss_pred CC--CccccccccCCCcEEEccCCcccccC----chhhcCCCCCCeeeccCCcCCCC----cccccCCCCCCcEEEccCC
Q 001706 208 PA--MIPIEFGMLKKLKTLWMTEANLIGEI----PEAMSNLSSLEILALNGNHLEGA----IPSGLFLLNNLTQLFLYDN 277 (1024)
Q Consensus 208 ~~--~~~~~~~~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N 277 (1024)
.+ .+...|...+.|+.+.+..|.+...- ...|..+++|+.|||.+|.++.. +...+..+++|+.|++++|
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 32 23445666777777777777664322 23567778888888888877632 3445566677777777777
Q ss_pred ccCCCCCcchhhcccccccCCCCcCCCCCCccc-CCCcccceeecccccccc----cCCccCCCccccceeecccccc
Q 001706 278 ILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEF-GKLKNLQLLGLFSNHLSG----EVPASIGKIPALKKFKVFNNSL 350 (1024)
Q Consensus 278 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 350 (1024)
.+.......+.. .+ ...++|+.|.|.+|.++. .+-.++...+.|..|+|++|++
T Consensus 252 ll~~~Ga~a~~~-------------------al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 252 LLENEGAIAFVD-------------------ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccHHHHHH-------------------HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 776544333211 11 124556666666666642 1222344566777777777777
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=117.37 Aligned_cols=131 Identities=21% Similarity=0.180 Sum_probs=95.1
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCcee-eEEEEEecCCceEEEEeccC
Q 001706 696 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV-KLWCCISSENSKLLVYEYME 774 (1024)
Q Consensus 696 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv-~l~~~~~~~~~~~lv~e~~~ 774 (1024)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.+++ +++.+. ....++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecC
Confidence 356889999999999874 77899998744321 123567899999988654444 455443 234589999999
Q ss_pred CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccC--CCceEeCCCCCCCEEECCCCcEEEeccc
Q 001706 775 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC--TPQIIHRDVKSSNILLDSEFKAKIADFG 852 (1024)
Q Consensus 775 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlk~~Nill~~~~~~kl~DFg 852 (1024)
|.++.+. . .....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||
T Consensus 75 G~~l~~~----~-----------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~ 132 (170)
T cd05151 75 GSELLTE----D-----------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE 132 (170)
T ss_pred CCccccc----c-----------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence 9876532 0 011245678999999999872 22369999999999999 6789999999
Q ss_pred ccee
Q 001706 853 LAKM 856 (1024)
Q Consensus 853 la~~ 856 (1024)
.+..
T Consensus 133 ~a~~ 136 (170)
T cd05151 133 YAGM 136 (170)
T ss_pred cccC
Confidence 8753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.2e-11 Score=117.79 Aligned_cols=127 Identities=24% Similarity=0.327 Sum_probs=34.5
Q ss_pred ccCCCCCCcccccCccccCCCccccc-cCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCccc-CCCCC
Q 001706 117 LYNCTKLQNLDLSQNYFVGPIPSDID-RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI-GDLSN 194 (1024)
Q Consensus 117 l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 194 (1024)
+.+..++++|+|++|.|+. + ..++ .+.+|+.|||++|.|+ .++ .+..+++|++|++++|+|+. ++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3344456666666666653 2 2344 3556666666666666 332 45556666666666666663 33233 24566
Q ss_pred CcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCc---hhhcCCCCCCeee
Q 001706 195 LEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP---EAMSNLSSLEILA 249 (1024)
Q Consensus 195 L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~ 249 (1024)
|++|++++|++.....+ ..+..+++|+.|+|.+|.+...-- ..+..+++|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l-~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNEL-EPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCC-GGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHh-HHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 66666666654333222 234445555555555555543311 1345555665554
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.5e-10 Score=111.23 Aligned_cols=139 Identities=13% Similarity=0.092 Sum_probs=97.7
Q ss_pred ceeeecCcEEEEEEEEcC------CCcEEEEEEeccchh-------h---h---------HHHHHH----HHHHHHHHhc
Q 001706 697 NLIGSGGSGQVYRIDING------AGEFVAVKRIWNNRK-------L---N---------QKLEKE----FIAEIEILGT 747 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~------~~~~vavK~~~~~~~-------~---~---------~~~~~~----~~~E~~~l~~ 747 (1024)
-.||.|.-+.||.|...+ .+..+|||+.+.... + + ....+. ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999997653 357899998752110 0 0 011223 3389999999
Q ss_pred ccc--CceeeEEEEEecCCceEEEEeccCCCCHHH-HhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccc-ccc
Q 001706 748 IRH--ANIVKLWCCISSENSKLLVYEYMENQSLDR-WLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYM-HHD 823 (1024)
Q Consensus 748 l~h--pniv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~ 823 (1024)
+.. -++.+.+++ ...++||||+.++.+.. .++. ..++......+..+++.+|.++ |+.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--------------~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--------------AKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--------------cccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 852 455566654 46789999997653321 1111 1233445667889999999999 777
Q ss_pred CCCceEeCCCCCCCEEECCCCcEEEeccccceec
Q 001706 824 CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 824 ~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
+++|||+++.||+++ ++.++++|||.|...
T Consensus 145 ---glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 ---NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred ---CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999997 468999999998765
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-11 Score=141.77 Aligned_cols=211 Identities=21% Similarity=0.249 Sum_probs=148.9
Q ss_pred hhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
.+.+.+.+-+.+|+++.++.++-...+...+.|+............+...++-.+.-..+||-+++....+......++|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 34566677889999999998877777766666654322111111112222222222223457777665555556778999
Q ss_pred EeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEe
Q 001706 770 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849 (1024)
Q Consensus 770 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 849 (1024)
++|+.+++|..-++..+. .+....+.....+.++.+|||.. .+.|||++|.|.+...++..++.
T Consensus 883 ~~~~~~~~~~Skl~~~~~-------------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGC-------------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred hHHhccCCchhhhhcCCC-------------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccC
Confidence 999999999999887552 22233344556677899999987 69999999999999999999999
Q ss_pred ccccceeccc---------------------C--------CCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHH
Q 001706 850 DFGLAKMLAK---------------------Q--------GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLL 900 (1024)
Q Consensus 850 DFgla~~~~~---------------------~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~ 900 (1024)
|||....... . ++........+|+.|.+||...+......+|+|+.|++++
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhh
Confidence 9984322210 0 0001123456899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCcc
Q 001706 901 ELVTGKEANYGDEHTS 916 (1024)
Q Consensus 901 el~tg~~p~~~~~~~~ 916 (1024)
|.++|..||.......
T Consensus 1027 e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred hhhcCCCCCCCcchhh
Confidence 9999999997765543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-11 Score=139.21 Aligned_cols=247 Identities=28% Similarity=0.320 Sum_probs=137.6
Q ss_pred cCCCCCCcccccCccccCCCccccccCCCCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcE
Q 001706 118 YNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEV 197 (1024)
Q Consensus 118 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 197 (1024)
..+..++.+++..|.+.. +-..+..+++|+.|++.+|+|. .+...+..+++|++|+|++|.|+... .+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhh
Confidence 344455555555555552 2233555555666666666655 33333555556666666666655332 2344455556
Q ss_pred EecccCCCCCCCCccccccccCCCcEEEccCCcccccCc-hhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccC
Q 001706 198 LGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP-EAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD 276 (1024)
Q Consensus 198 L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 276 (1024)
|++++|.+... ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..
T Consensus 145 L~l~~N~i~~~----~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~ 217 (414)
T KOG0531|consen 145 LNLSGNLISDI----SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLD 217 (414)
T ss_pred heeccCcchhc----cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccc
Confidence 66665553322 122335555555555555554433 2 4667778888888887762 23344455556667777
Q ss_pred CccCCCCCcchhhc--ccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeeccccccccc-
Q 001706 277 NILSGEIPSSVEAL--KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGV- 353 (1024)
Q Consensus 277 N~l~~~~~~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~- 353 (1024)
|.++..-+. .... +|+.+++++|.+. ..+..+..+..+..|++.+|++... ..+...+.+..+.+..|.+...
T Consensus 218 n~i~~~~~l-~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 293 (414)
T KOG0531|consen 218 NKISKLEGL-NELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSE 293 (414)
T ss_pred ccceeccCc-ccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchh
Confidence 777643221 1111 3778888888877 3445667777788888888877632 2344556666677777766522
Q ss_pred --CCcc-ccCCCCCcEEEeecCCCCCCCC
Q 001706 354 --LPPE-IGLHSALEGFEVSTNQFSGPLP 379 (1024)
Q Consensus 354 --~p~~-~~~~~~L~~L~ls~N~l~~~~p 379 (1024)
.... .+....++.+.+..|.+....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 294 AISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhhccccccccccccccccccCccccccc
Confidence 1111 4455566666666666654443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-10 Score=130.40 Aligned_cols=247 Identities=20% Similarity=0.173 Sum_probs=175.7
Q ss_pred hhCCCccceeeecCcEEEEEEEEc-CCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEEecCCceE
Q 001706 690 LSSLTESNLIGSGGSGQVYRIDIN-GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 767 (1024)
Q Consensus 690 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 767 (1024)
..+|..+..||.|.|+.||+.... .++..|++|.+....... .....-..|+.+...+ .|.++++++..|..-...|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch-HhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 456778889999999999987655 567789999875543322 2223344566666666 5999999888887777888
Q ss_pred EEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCC-CcE
Q 001706 768 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKA 846 (1024)
Q Consensus 768 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~ 846 (1024)
+--||+++++......- ...++...++++..|++.++.++|+. .++|+|++|+||++..+ +..
T Consensus 343 ip~e~~~~~s~~l~~~~-------------~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-------------SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred CchhhhcCcchhhhhHH-------------HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhh
Confidence 99999999988876621 23477788899999999999999988 99999999999999886 888
Q ss_pred EEeccccceecccCCCCceecccccCccc-CchhhccCCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Q 001706 847 KIADFGLAKMLAKQGEPHTMSAVAGSFGY-FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925 (1024)
Q Consensus 847 kl~DFgla~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 925 (1024)
+++|||.+..+. .........+..| .+|+......+-.+.|++|||..+.|..++..-...... |. ..
T Consensus 407 ~~~~~~~~t~~~----~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-----~~--~i 475 (524)
T KOG0601|consen 407 KLGDFGCWTRLA----FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-----SL--TI 475 (524)
T ss_pred hccccccccccc----eecccccccccccccchhhccccccccccccccccccccccccCcccCccccc-----ce--ee
Confidence 999999886421 1111222334445 366667777889999999999999999998654322111 00 00
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001706 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 975 (1024)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 975 (1024)
..+. . +........+..+.+.+...|+..||.+.++...
T Consensus 476 ~~~~---------~--p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 476 RSGD---------T--PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred eccc---------c--cCCCchHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 0000 0 0111122456667888889999999999887653
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-10 Score=142.57 Aligned_cols=271 Identities=24% Similarity=0.269 Sum_probs=163.0
Q ss_pred CEEEEEeCCCcccccCCccccCCCceeEEEccCCC--CCCCCCccccCCCCCCcccccCccccCCCccccccCCCCcEEe
Q 001706 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNS--IPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCID 151 (1024)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 151 (1024)
.+..+.+.++.+... +... ..+.|++|-+..|. +....+.+|..++.|++||||+|.=-+.+|..++.|.+|++|+
T Consensus 524 ~~rr~s~~~~~~~~~-~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHI-AGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhhc-cCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 355555555554322 2222 22368888888886 5534445578899999999999876678999999999999999
Q ss_pred CCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcc
Q 001706 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL 231 (1024)
Q Consensus 152 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l 231 (1024)
|++..++ .+|..+++|+.|.+|++..+.-...+|.....|++|++|.+..-........-..+..|.+|+.|.......
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 9999998 899999999999999999888766677878889999999987654223333334445555555555533222
Q ss_pred cccCchhhcCCCCCC----eeeccCCcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhc-------ccccccCCCC
Q 001706 232 IGEIPEAMSNLSSLE----ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-------KLTDIDLSMN 300 (1024)
Q Consensus 232 ~~~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-------~L~~L~Ls~N 300 (1024)
.+-..+..++.|. .+.+.++... ..+..+..+.+|+.|.+.++.+........... ++..+...+.
T Consensus 681 --~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~ 757 (889)
T KOG4658|consen 681 --LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC 757 (889)
T ss_pred --HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc
Confidence 1112223333333 3333333433 456677888889999998888864333221111 1111111111
Q ss_pred cCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeeccccccc
Q 001706 301 NLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLS 351 (1024)
Q Consensus 301 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 351 (1024)
..- ..+.+..-.++|+.|++........+......+..++.+.+..+.+.
T Consensus 758 ~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 758 HML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred ccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 111 12222334456666666665555444444444444444444444444
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=105.20 Aligned_cols=134 Identities=25% Similarity=0.343 Sum_probs=99.9
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccch----hhhH-HHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEEEe
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR----KLNQ-KLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 771 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 771 (1024)
..+++|+-+.+|.+.+. |..+++|.-.... ..++ -...+..+|++++.+++--.|.--+-+..+.+...++||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999774 4457777432111 1122 224578899999999875555544556667888899999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecc
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DF 851 (1024)
|++|..|.+++.... ..++..|-.-+.-||.. ||+|+|+.++||++..+. +.++||
T Consensus 80 ~I~G~~lkd~l~~~~--------------------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 80 YIEGELLKDALEEAR--------------------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred EeCChhHHHHHHhcc--------------------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 999999998887431 24556666666779999 999999999999998775 999999
Q ss_pred cccee
Q 001706 852 GLAKM 856 (1024)
Q Consensus 852 gla~~ 856 (1024)
|++.+
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99865
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.7e-11 Score=119.74 Aligned_cols=139 Identities=19% Similarity=0.219 Sum_probs=86.4
Q ss_pred CCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhh
Q 001706 304 GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLC 383 (1024)
Q Consensus 304 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 383 (1024)
|..-.....+..|+.||||+|.|+ .+.++..-+|.++.|++++|+|..+ ..+..+.+|+.||||+|.++ .+..|-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHh
Confidence 333344455667777788888777 6666777777788888888877743 23677778888888888776 3444444
Q ss_pred ccccccceecccCccCCCCCcCCCCccccceeecccccCcc-CCCccccccccccccccccCcccC
Q 001706 384 AGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG-ELPTGLWTTFNLSSLMLSDNTISG 448 (1024)
Q Consensus 384 ~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~i~~ 448 (1024)
.+.+++.|.++.|.+... ..++.+-+|..||+++|+|.. .--..+++++-|+.|.|.+|.|.+
T Consensus 350 KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 455555555555554321 345555666666666666652 112345666666666666666653
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.2e-11 Score=136.64 Aligned_cols=242 Identities=23% Similarity=0.290 Sum_probs=116.8
Q ss_pred cccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCCCCCcEEEeec
Q 001706 292 LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVST 371 (1024)
Q Consensus 292 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~ 371 (1024)
++.+++..|.+.. +-..+..+++|..|++.+|+|. .+...+..+++|++|++++|+|+... .+..+..|+.|++++
T Consensus 74 l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhheecc
Confidence 4444444444442 2233555566666666666665 22222455555555555555555332 233344455555555
Q ss_pred CCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccCCCccccccccccccccccCcccCCCC
Q 001706 372 NQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELP 451 (1024)
Q Consensus 372 N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p 451 (1024)
|.+... ..+..+..|+.+++++|++...-+.....+..++.+++.+|.+...-.
T Consensus 150 N~i~~~--------------------------~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~ 203 (414)
T KOG0531|consen 150 NLISDI--------------------------SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEG 203 (414)
T ss_pred Ccchhc--------------------------cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccc
Confidence 555411 223335666666666666653222003445556666666666552222
Q ss_pred cccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCC--CCcEEEccCcccCCCCccccccccc
Q 001706 452 SKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS--HLNTLLLDGNKLSGKLPSQIVSWTS 529 (1024)
Q Consensus 452 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~ 529 (1024)
.. .+..+..+++..|.++-.-+ +..+. +|+.+++++|.+. .++..+..+..
T Consensus 204 ~~------------------------~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~ 256 (414)
T KOG0531|consen 204 LD------------------------LLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKN 256 (414)
T ss_pred hH------------------------HHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-ccccccccccc
Confidence 22 22333333444444442111 11111 2566666666665 34455556666
Q ss_pred cCeEeccCccccCccchhhhhccccceecccCCcCCCC---CCCc-cccc-ccccccccCCccccCCC
Q 001706 530 LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE---IPPE-IGQL-KLNTFNLSSNKLYGNIP 592 (1024)
Q Consensus 530 L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~---ip~~-~~~l-~l~~l~l~~N~l~g~~p 592 (1024)
+..|++++|+++.. ..+.....+..+.++.|.+... .... .+.. .+..+.+..|......+
T Consensus 257 l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 257 LPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 66666666666532 2344455556666666665521 1111 1122 36666667776665444
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.8e-11 Score=125.95 Aligned_cols=210 Identities=21% Similarity=0.239 Sum_probs=157.9
Q ss_pred CCCEEEEEeCCCcccc----cCCccccCCCceeEEEccCC---CCCCCCCc-------cccCCCCCCcccccCccccCCC
Q 001706 72 FNSVTGISLRHKDITQ----KIPPIICDLKNLTTIDLSSN---SIPGEFPE-------FLYNCTKLQNLDLSQNYFVGPI 137 (1024)
Q Consensus 72 ~~~v~~l~l~~~~l~~----~~~~~~~~l~~L~~L~L~~n---~l~~~~p~-------~l~~l~~L~~L~Ls~N~l~~~~ 137 (1024)
.+.++.|+|++|.+.. .+.+.+.+.++|+..++|+- ++...+|+ ++..+++|++||||+|-|.-..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 3578999999998854 35667888889999999873 22234553 4566789999999999987555
Q ss_pred cccc----ccCCCCcEEeCCCccccccc-------------ccccccccccceEeeeccccCCCC----CcccCCCCCCc
Q 001706 138 PSDI----DRISGLQCIDLGGNNFSGDI-------------PRSIGRLSELQTLYLYMNEFNGTF----PKEIGDLSNLE 196 (1024)
Q Consensus 138 p~~~----~~l~~L~~L~Ls~N~l~~~~-------------p~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~ 196 (1024)
+..| .....|++|.|.+|.+.-.- -...+.-+.|+.+...+|++.... ...|...+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 5444 55789999999999887221 112344578999999999997332 23566778999
Q ss_pred EEecccCCCCCCCC--ccccccccCCCcEEEccCCcccccCc----hhhcCCCCCCeeeccCCcCCCCcccccC-----C
Q 001706 197 VLGLAYNSNFKPAM--IPIEFGMLKKLKTLWMTEANLIGEIP----EAMSNLSSLEILALNGNHLEGAIPSGLF-----L 265 (1024)
Q Consensus 197 ~L~ls~N~~~~~~~--~~~~~~~l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~~p~~l~-----~ 265 (1024)
.+.+++|.+...+. +...|..++.|+.|+|.+|-++.... ..++.+++|++|+++++.++.....+|. .
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~ 268 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKES 268 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhcc
Confidence 99999998776554 45668899999999999999876544 4577889999999999999865544443 3
Q ss_pred CCCCcEEEccCCccCC
Q 001706 266 LNNLTQLFLYDNILSG 281 (1024)
Q Consensus 266 l~~L~~L~L~~N~l~~ 281 (1024)
.++|++|.|.+|.|+.
T Consensus 269 ~p~L~vl~l~gNeIt~ 284 (382)
T KOG1909|consen 269 APSLEVLELAGNEITR 284 (382)
T ss_pred CCCCceeccCcchhHH
Confidence 5678888888888764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.5e-09 Score=100.33 Aligned_cols=146 Identities=21% Similarity=0.263 Sum_probs=107.2
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEec-----cchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEecCCceEEE
Q 001706 695 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIW-----NNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 769 (1024)
Q Consensus 695 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 769 (1024)
....|-+|+-+.|+++.+. |+..+||.-. .+.-..+-..++..+|++.+.++.--.|.--.-++.|...-.++
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 4568899999999999884 7777777432 22222334467899999999998644444333355566777899
Q ss_pred EeccCC-CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC---c
Q 001706 770 YEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF---K 845 (1024)
Q Consensus 770 ~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~ 845 (1024)
|||++| .++.+++...-.. ....+....++.+|-+.+.-||.. +|+|+||..+||++..++ .
T Consensus 89 ME~~~g~~~vk~~i~~~~~~-----------~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMED-----------ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred EEeccchhHHHHHHHHHccC-----------cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCc
Confidence 999986 5888888765431 122233367888888899999999 999999999999997765 3
Q ss_pred EEEecccccee
Q 001706 846 AKIADFGLAKM 856 (1024)
Q Consensus 846 ~kl~DFgla~~ 856 (1024)
+.++|||++..
T Consensus 155 ~~lIdfgls~~ 165 (229)
T KOG3087|consen 155 PILIDFGLSSV 165 (229)
T ss_pred eEEEeecchhc
Confidence 58999999854
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.7e-11 Score=125.48 Aligned_cols=135 Identities=26% Similarity=0.241 Sum_probs=57.8
Q ss_pred CCCCcEEeCCCcccccccc--cccccccccceEeeeccccCCCCC--cccCCCCCCcEEecccCCCCCCCCccccccccC
Q 001706 144 ISGLQCIDLGGNNFSGDIP--RSIGRLSELQTLYLYMNEFNGTFP--KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLK 219 (1024)
Q Consensus 144 l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~ 219 (1024)
+.+|+...|.+..+. .++ .....|++++.||||.|-|....| .-...|++|+.|+|+.|++.... ....-..++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~-~s~~~~~l~ 197 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFI-SSNTTLLLS 197 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCc-cccchhhhh
Confidence 444455555444443 222 133445555555555554442211 12234555555555555422111 011112345
Q ss_pred CCcEEEccCCccccc-CchhhcCCCCCCeeeccCCcCCCCcccccCCCCCCcEEEccCCccC
Q 001706 220 KLKTLWMTEANLIGE-IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (1024)
Q Consensus 220 ~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (1024)
.|+.|.|+.|+++-. +-..+..+++|+.|+|..|..-+.-......+..|+.|+|++|++-
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 555666666655422 1223445566666666666422122222223444444455444443
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-10 Score=112.86 Aligned_cols=130 Identities=27% Similarity=0.294 Sum_probs=49.5
Q ss_pred ccCCCceeEEEccCCCCCCCCCcccc-CCCCCCcccccCccccCCCccccccCCCCcEEeCCCccccccccccc-ccccc
Q 001706 93 ICDLKNLTTIDLSSNSIPGEFPEFLY-NCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSE 170 (1024)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~ 170 (1024)
+.+...+++|+|++|.|+ .+. .++ .+.+|+.||||+|.|+.. + .+..+++|+.|++++|+|+ .++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 334456788888888887 443 355 578888899999988843 2 5778888999999999988 454444 46888
Q ss_pred cceEeeeccccCCCC-CcccCCCCCCcEEecccCCCCCCC-CccccccccCCCcEEEcc
Q 001706 171 LQTLYLYMNEFNGTF-PKEIGDLSNLEVLGLAYNSNFKPA-MIPIEFGMLKKLKTLWMT 227 (1024)
Q Consensus 171 L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~~~~~~-~~~~~~~~l~~L~~L~L~ 227 (1024)
|++|+|++|+|...- -..+..+++|++|+|.+|.+.... .-...+..+|+|+.|+-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 999999999887422 245677888999999888754321 123446778888888754
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.3e-10 Score=135.91 Aligned_cols=293 Identities=21% Similarity=0.220 Sum_probs=170.1
Q ss_pred CCCceeEEEccCCCCCCCCCccccCCCCCCcccccCcc--ccCCCccccccCCCCcEEeCCCcccccccccccccccccc
Q 001706 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY--FVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQ 172 (1024)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 172 (1024)
+....+...+.+|.+. .++.... .++|++|-+.+|. +....+..|..++.|++|||++|.=-+.+|..++.|-+|+
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 4466788888888776 4444433 3478888888886 5544455578888899999988776668888888888888
Q ss_pred eEeeeccccCCCCCcccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCCCCCeeeccC
Q 001706 173 TLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNG 252 (1024)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 252 (1024)
+|+|++..++ .+|..+++|..|.+|++.++. ....+|.....|++|++|.+..-..
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~--~l~~~~~i~~~L~~Lr~L~l~~s~~--------------------- 654 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTG--RLESIPGILLELQSLRVLRLPRSAL--------------------- 654 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheecccccc--ccccccchhhhcccccEEEeecccc---------------------
Confidence 8888888888 788888888888888888775 2222344444556666665543220
Q ss_pred CcCCCCcccccCCCCCCcEEEccCCccCCCCCcchhhcc----cccccCCCCcCCCCCCcccCCCcccceeecccccccc
Q 001706 253 NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328 (1024)
Q Consensus 253 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~----L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 328 (1024)
..+...-..+.++.+|+.+....... ....+.....+ .+.+.+..+... ..+..++.+.+|+.|.+.++.+..
T Consensus 655 -~~~~~~l~el~~Le~L~~ls~~~~s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 655 -SNDKLLLKELENLEHLENLSITISSV-LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred -ccchhhHHhhhcccchhhheeecchh-HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCch
Confidence 11111122223334444433322221 01111111111 223333333333 455677888899999998888864
Q ss_pred cCCccCCC------ccccceeecccccccccCCccccCCCCCcEEEeecCCCCCCCChhhhccccccceecccCccCCC-
Q 001706 329 EVPASIGK------IPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGA- 401 (1024)
Q Consensus 329 ~~p~~~~~------l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~- 401 (1024)
........ ++++..+...++..- ..+.+....++|+.|.+........+......+..+..+.+..+.+.+.
T Consensus 732 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~ 810 (889)
T KOG4658|consen 732 IVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLR 810 (889)
T ss_pred hhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccce
Confidence 43333222 223333333332211 2233445668899999988877766666666666666656666655554
Q ss_pred CCcCCCCccccceeec
Q 001706 402 VPKSLGNCRTLRTVQL 417 (1024)
Q Consensus 402 ~p~~l~~l~~L~~L~L 417 (1024)
.-...+.++++..+.+
T Consensus 811 ~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 811 MLCSLGGLPQLYWLPL 826 (889)
T ss_pred eeecCCCCceeEeccc
Confidence 2334444444444433
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.7e-09 Score=111.38 Aligned_cols=143 Identities=19% Similarity=0.266 Sum_probs=100.7
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcccc--CceeeEEEEEecC---CceEEEEe
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIVKLWCCISSE---NSKLLVYE 771 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~---~~~~lv~e 771 (1024)
+.|+.|.++.||++... +|+.+++|+....... .....+.+|+++++.+++ ..+.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999875 3578999987543221 134578899999999965 3456677766553 36789999
Q ss_pred ccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhcccccc----------------------------
Q 001706 772 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD---------------------------- 823 (1024)
Q Consensus 772 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------- 823 (1024)
|++|.++.+.+.. ..++......++.++++++++||+.
T Consensus 81 ~i~G~~l~~~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (223)
T cd05154 81 RVDGRVLRDRLLR--------------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQY 146 (223)
T ss_pred EeCCEecCCCCCC--------------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHH
Confidence 9999888765421 0133444445555555555555532
Q ss_pred -------------------------CCCceEeCCCCCCCEEECC--CCcEEEecccccee
Q 001706 824 -------------------------CTPQIIHRDVKSSNILLDS--EFKAKIADFGLAKM 856 (1024)
Q Consensus 824 -------------------------~~~~ivH~Dlk~~Nill~~--~~~~kl~DFgla~~ 856 (1024)
....++|+|+++.||+++. ++.+.++||+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 147 DASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1346899999999999998 66789999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-08 Score=105.02 Aligned_cols=265 Identities=13% Similarity=0.116 Sum_probs=161.3
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhcc-ccCceeeEEEEE------ec-CCc
Q 001706 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCI------SS-ENS 765 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~------~~-~~~ 765 (1024)
...+.+|+|+.+.+|-.-.- + ..+-|+.+...... .. +-++.|... .||-+-.-+.+= .+ +..
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~---~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAA---QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCchH---HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 34678999999999964321 1 12456654432211 11 112233444 576554422221 12 223
Q ss_pred eEEEEeccCCC-CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCC
Q 001706 766 KLLVYEYMENQ-SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844 (1024)
Q Consensus 766 ~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 844 (1024)
..+.|+.+++. ....+.... .+..+....+|...++++..+|.+.+.||++ |.+-+|+.++|+|+++++
T Consensus 85 iGflmP~v~g~~pI~~~y~p~-------tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~ 154 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPA-------TRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDS 154 (637)
T ss_pred eEEecccCCCccchhhhcCch-------hhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCc
Confidence 66788888764 233333221 2223345689999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecccCCCCceecccccCcccCchhhcc-----CCCCCCCCcchhHHHHHHHHHhC-CCCCCCC-----C
Q 001706 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTG-KEANYGD-----E 913 (1024)
Q Consensus 845 ~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGvil~el~tg-~~p~~~~-----~ 913 (1024)
.|++.|-+.-... .........+|...|.+||.-. +..-+...|.|.+||++++++.| ++||.+- .
T Consensus 155 ~V~LVdsDsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 155 KVVLVDSDSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred eEEEEcccceeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 9999986643332 3344455678999999999543 34556789999999999999998 7888652 1
Q ss_pred CcchH-HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCC--CCCCCCHHHHHHHHhhcC
Q 001706 914 HTSLA-EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL--PSSRPSMKEVLQILRRCC 980 (1024)
Q Consensus 914 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~~~ 980 (1024)
..... +.....+....+...-..+.-......--++.+..+...|+... +.-||+++-++..|.++.
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 11111 11111111100000000000011112223466777888888654 567999999888776654
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.7e-10 Score=119.98 Aligned_cols=184 Identities=24% Similarity=0.232 Sum_probs=101.6
Q ss_pred ccccccceEeeeccccCCCCC--cccCCCCCCcEEecccCCCCCCCCccccccccCCCcEEEccCCcccccCchhhcCCC
Q 001706 166 GRLSELQTLYLYMNEFNGTFP--KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLS 243 (1024)
Q Consensus 166 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 243 (1024)
+++.+|+...|.+..+. ..+ .....+++++.||||.|-+..-. .+..-...++
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~------------------------~v~~i~eqLp 172 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWF------------------------PVLKIAEQLP 172 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHH------------------------HHHHHHHhcc
Confidence 46788888888888876 333 35566777788888777422111 1112344566
Q ss_pred CCCeeeccCCcCCCCccccc-CCCCCCcEEEccCCccCCCCCcch--hhcccccccCCCCcCCCCCCcccCCCcccceee
Q 001706 244 SLEILALNGNHLEGAIPSGL-FLLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLG 320 (1024)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~~~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 320 (1024)
+|+.|+|+.|++.....+.. ..+++|+.|.|+.|.++-.--... ...+|+.|+|..|..-+.-......+..|+.||
T Consensus 173 ~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~Ld 252 (505)
T KOG3207|consen 173 SLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELD 252 (505)
T ss_pred cchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcc
Confidence 77777777777653222211 135567777777776652111111 122566666666643223333344566677777
Q ss_pred cccccccccCC--ccCCCccccceeecccccccccC-Ccc-----ccCCCCCcEEEeecCCCC
Q 001706 321 LFSNHLSGEVP--ASIGKIPALKKFKVFNNSLSGVL-PPE-----IGLHSALEGFEVSTNQFS 375 (1024)
Q Consensus 321 L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~-p~~-----~~~~~~L~~L~ls~N~l~ 375 (1024)
|++|++-. .+ ...+.++.|..|+++.+.+..+- |+. ...+.+|++|+++.|++.
T Consensus 253 Ls~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 253 LSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 77776652 22 23455666666666666665321 221 234456666666666654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.79 E-value=7e-08 Score=106.02 Aligned_cols=180 Identities=18% Similarity=0.264 Sum_probs=134.5
Q ss_pred cEEEEEEEEcCCCcEEEEEEeccchhhhHHHHHHHHHHHHHHhccccCceeeEEEEEe----cCCceEEEEeccCC-CCH
Q 001706 704 SGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS----SENSKLLVYEYMEN-QSL 778 (1024)
Q Consensus 704 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~----~~~~~~lv~e~~~~-gsL 778 (1024)
..+.||+...-+|..|++|+++..+.... .....-+++++++.|+|+|++.+++. .+...++||+|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 35789999998999999999955443222 12233467889999999999988775 24467899999997 788
Q ss_pred HHHhccCcccc--ccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEecccccee
Q 001706 779 DRWLHGRKRSL--VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856 (1024)
Q Consensus 779 ~~~l~~~~~~~--~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~ 856 (1024)
.++-....... ............++...|.++.|+..||.++|+. |..-+-|.+++|+++++.+++|+..|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 87766543321 1112223345678899999999999999999999 999999999999999999999999888766
Q ss_pred cccCCCCceecccccCcccCchhhccCCCCCCCCcchhHHHHHHHHHhCCCC
Q 001706 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 908 (1024)
Q Consensus 857 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGvil~el~tg~~p 908 (1024)
+..+. .+| +. -..+-|.=.+|.++..+.||+.-
T Consensus 443 l~~d~--------------~~~--le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 443 LQEDP--------------TEP--LE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ecCCC--------------Ccc--hh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 54432 011 11 12257888999999999999754
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-07 Score=95.37 Aligned_cols=128 Identities=25% Similarity=0.243 Sum_probs=83.2
Q ss_pred EEEEEEEcCCCcEEEEEEeccc-----------------------hhhhHHHHHHHHHHHHHHhccccC--ceeeEEEEE
Q 001706 706 QVYRIDINGAGEFVAVKRIWNN-----------------------RKLNQKLEKEFIAEIEILGTIRHA--NIVKLWCCI 760 (1024)
Q Consensus 706 ~Vy~~~~~~~~~~vavK~~~~~-----------------------~~~~~~~~~~~~~E~~~l~~l~hp--niv~l~~~~ 760 (1024)
.||.|... ++..+|||+.+.. ............+|++.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48998874 5789999987421 011122345788999999999654 566666542
Q ss_pred ecCCceEEEEeccC--CCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhcc-ccccCCCceEeCCCCCCC
Q 001706 761 SSENSKLLVYEYME--NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCY-MHHDCTPQIIHRDVKSSN 837 (1024)
Q Consensus 761 ~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlk~~N 837 (1024)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. |++|+|+.+.|
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~---------------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~N 137 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD---------------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYN 137 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG---------------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTS
T ss_pred ----CCEEEEEecCCCccchhhHHhcc---------------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhh
Confidence 4579999998 55554433211 1133455677777775555 4677 99999999999
Q ss_pred EEECCCCcEEEeccccceec
Q 001706 838 ILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 838 ill~~~~~~kl~DFgla~~~ 857 (1024)
|+++++ .+.++|||.|...
T Consensus 138 Ilv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 138 ILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EEEETT-CEEE--GTTEEET
T ss_pred EEeecc-eEEEEecCcceec
Confidence 999988 9999999998764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.4e-09 Score=83.38 Aligned_cols=61 Identities=33% Similarity=0.465 Sum_probs=41.3
Q ss_pred CCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcC
Q 001706 504 SHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564 (1024)
Q Consensus 504 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 564 (1024)
++|++|+|++|+|+...+..|..+++|+.|++++|++++..|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566777777777644445666777777777777777655556677777777777777764
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.8e-07 Score=99.73 Aligned_cols=144 Identities=14% Similarity=0.098 Sum_probs=98.3
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEeccchhhh---H-----HHHHHHHHHHHHHhccccC--ceeeEEEEEec----
Q 001706 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN---Q-----KLEKEFIAEIEILGTIRHA--NIVKLWCCISS---- 762 (1024)
Q Consensus 697 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~-----~~~~~~~~E~~~l~~l~hp--niv~l~~~~~~---- 762 (1024)
+.+-+.....|+++.. .|+.|.||+........ . .....+.+|.+.+.++..- .+++.+++...
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 3444334445777766 57789999774322100 0 1112478999999888422 22233444432
Q ss_pred -CCceEEEEeccCCC-CHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEE
Q 001706 763 -ENSKLLVYEYMENQ-SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840 (1024)
Q Consensus 763 -~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 840 (1024)
....++|||++++. +|.+++..... ...+...+..++.+++..++-||.. ||+|+|++++|||+
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~-----------~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl 171 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT-----------NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLL 171 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEE
Confidence 23578999999985 89998853211 1244566778999999999999999 99999999999999
Q ss_pred CC-------CCcEEEecccccee
Q 001706 841 DS-------EFKAKIADFGLAKM 856 (1024)
Q Consensus 841 ~~-------~~~~kl~DFgla~~ 856 (1024)
+. +..+.++||+.+..
T Consensus 172 ~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 172 HLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eccccCCCCCceEEEEECCcccc
Confidence 75 46899999998753
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.9e-09 Score=83.24 Aligned_cols=58 Identities=33% Similarity=0.479 Sum_probs=26.9
Q ss_pred CCcEEeCCCcccccccccccccccccceEeeeccccCCCCCcccCCCCCCcEEecccC
Q 001706 146 GLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN 203 (1024)
Q Consensus 146 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 203 (1024)
+|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 3444444444444333334444444444444444444444444444444444444444
|
... |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.2e-09 Score=95.79 Aligned_cols=116 Identities=25% Similarity=0.336 Sum_probs=81.1
Q ss_pred cccceeecCCccccccCcccccC-CCCCcEEEccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceec
Q 001706 480 KNLIVFKASNNLFSGEIPVELTS-LSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLD 558 (1024)
Q Consensus 480 ~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ 558 (1024)
..|+..+|++|.|. ..|..|.. .+.++.|+|++|+|+ .+|.++..++.|+.||++.|.|. ..|..+..|.+|-.||
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 34555566666666 45555544 446777888888887 67777888888888888888887 6777777788888888
Q ss_pred ccCCcCCCCCCCcccccc-cccccccCCccccCCCccccccc
Q 001706 559 LSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLA 599 (1024)
Q Consensus 559 ls~N~l~g~ip~~~~~l~-l~~l~l~~N~l~g~~p~~~~~~~ 599 (1024)
..+|+.. +||..+-... ....++.++.+.+.-|..++.+.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccccC
Confidence 8888886 6776532222 44556788888888877766543
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.1e-08 Score=72.47 Aligned_cols=38 Identities=42% Similarity=0.997 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHcCCCC--CCCCCCCC--CCCCCCCcceee
Q 001706 34 TEERTILLNLKQQLGNPP--SLQSWTST--SSPCDWPEITCT 71 (1024)
Q Consensus 34 ~~~~~aL~~~k~~~~~~~--~l~sw~~~--~~~c~w~gv~C~ 71 (1024)
++|++||++||+++..++ .+.+|... .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999999644 58999987 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.4e-09 Score=94.86 Aligned_cols=137 Identities=22% Similarity=0.278 Sum_probs=79.2
Q ss_pred cccccccccCcccCCCCc-----ccccCCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEE
Q 001706 435 NLSSLMLSDNTISGELPS-----KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTL 509 (1024)
Q Consensus 435 ~L~~L~Ls~N~i~~~~p~-----~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 509 (1024)
.+..+||++++|- .++. .....|+..+|++|.|...++..-..++.++.|++++|.|+ .+|.++..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 3455666666553 2222 12234556666666666555554455556666666666666 566666666666666
Q ss_pred EccCcccCCCCccccccccccCeEeccCccccCccchhhhhccccceecccCCcCCCCCCCccccc
Q 001706 510 LLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575 (1024)
Q Consensus 510 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~~~~~l 575 (1024)
+++.|.|. ..|..+..+.+|..|+..+|.+. .||-.+---...-..++.+|.+.|.-|..+..+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~ 169 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQAL 169 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccccccc
Confidence 66666665 55666666666666666666665 566554333333344556666666555444433
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=93.75 Aligned_cols=138 Identities=22% Similarity=0.148 Sum_probs=94.9
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEeccc----------hh---------hhHHHHHHHHHHHHHHhccccC--c
Q 001706 694 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNN----------RK---------LNQKLEKEFIAEIEILGTIRHA--N 752 (1024)
Q Consensus 694 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~----------~~---------~~~~~~~~~~~E~~~l~~l~hp--n 752 (1024)
.+.+.||.|.-+.||.|... .|.++|||.-+.- +. +-.-.+....+|.++|.++.-. .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34588999999999999886 6889999953211 00 1112345688999999998644 6
Q ss_pred eeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCC
Q 001706 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRD 832 (1024)
Q Consensus 753 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 832 (1024)
|.+.++ .+.-.+||||++|-.|...-- +-.....++..|+.-+.-.-.. ||||+|
T Consensus 173 VP~P~~----~nRHaVvMe~ieG~eL~~~r~------------------~~en~~~il~~il~~~~~~~~~---GiVHGD 227 (304)
T COG0478 173 VPKPIA----WNRHAVVMEYIEGVELYRLRL------------------DVENPDEILDKILEEVRKAYRR---GIVHGD 227 (304)
T ss_pred CCCccc----cccceeeeehcccceeecccC------------------cccCHHHHHHHHHHHHHHHHHc---CccccC
Confidence 666653 345689999999876654221 1122223344444444333344 999999
Q ss_pred CCCCCEEECCCCcEEEeccccceec
Q 001706 833 VKSSNILLDSEFKAKIADFGLAKML 857 (1024)
Q Consensus 833 lk~~Nill~~~~~~kl~DFgla~~~ 857 (1024)
+.+-||++++||.++++||--+...
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPI 252 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccC
Confidence 9999999999999999999766543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.5e-09 Score=120.59 Aligned_cols=136 Identities=24% Similarity=0.287 Sum_probs=88.5
Q ss_pred CCCcchhhcccccccCCCCcCCCCCCcccCCCcccceeecccccccccCCccCCCccccceeecccccccccCCccccCC
Q 001706 282 EIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLH 361 (1024)
Q Consensus 282 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 361 (1024)
.+...+...+|...+.++|.+. ....++.-++.|+.|+|++|+++.. +.+..++.|++|||++|++..+.--....+
T Consensus 156 d~~ns~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc 232 (1096)
T KOG1859|consen 156 DISNSPVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC 232 (1096)
T ss_pred ccccchhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh
Confidence 3334444446777788888877 5666777778888888888888632 367777888888888888874322222333
Q ss_pred CCCcEEEeecCCCCCCCChhhhccccccceecccCccCCCCCcCCCCccccceeecccccCccC-CCccccccccccccc
Q 001706 362 SALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE-LPTGLWTTFNLSSLM 440 (1024)
Q Consensus 362 ~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 440 (1024)
. |..|.+++|.++.. ..+.++++|+.|||+.|-|.+. --..+|.+..|..|+
T Consensus 233 ~-L~~L~lrnN~l~tL--------------------------~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~ 285 (1096)
T KOG1859|consen 233 K-LQLLNLRNNALTTL--------------------------RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLW 285 (1096)
T ss_pred h-heeeeecccHHHhh--------------------------hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHh
Confidence 3 77777777776521 2456677777777777777642 122356667777777
Q ss_pred cccCccc
Q 001706 441 LSDNTIS 447 (1024)
Q Consensus 441 Ls~N~i~ 447 (1024)
|.+|.+.
T Consensus 286 LeGNPl~ 292 (1096)
T KOG1859|consen 286 LEGNPLC 292 (1096)
T ss_pred hcCCccc
Confidence 7777765
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=6e-07 Score=90.27 Aligned_cols=140 Identities=19% Similarity=0.161 Sum_probs=102.8
Q ss_pred eecCcEEEEEEEEcCCCcEEEEEEeccchhhh---HHHHHHHHHHHHHHhcccc--CceeeEEEEEe---cC--CceEEE
Q 001706 700 GSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN---QKLEKEFIAEIEILGTIRH--ANIVKLWCCIS---SE--NSKLLV 769 (1024)
Q Consensus 700 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~---~~--~~~~lv 769 (1024)
|+||.+.|++.... |..+-+|+........ +.....|.+|+..+.++.. -.+.+.+ ++. .+ ..-+||
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 67899999998774 4479999764211111 2246789999999999852 2244444 222 11 235799
Q ss_pred EeccCC-CCHHHHhccCccccccCCCCcccccCChHHHHHHHHHHHhhhccccccCCCceEeCCCCCCCEEECCCCc--E
Q 001706 770 YEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--A 846 (1024)
Q Consensus 770 ~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~ 846 (1024)
+|-++| .+|.+++..... ...+...+..+..+++.+++-||+. |+.|+|+.+.||+++.++. +
T Consensus 104 Te~L~g~~~L~~~l~~~~~-----------~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v 169 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-----------SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEA 169 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-----------CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeE
Confidence 998765 799998865432 2356677789999999999999999 9999999999999987667 9
Q ss_pred EEecccccee
Q 001706 847 KIADFGLAKM 856 (1024)
Q Consensus 847 kl~DFgla~~ 856 (1024)
+++||.-++.
T Consensus 170 ~lIDlEk~r~ 179 (216)
T PRK09902 170 GFLDLEKSRR 179 (216)
T ss_pred EEEEhhccch
Confidence 9999986654
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.7e-08 Score=112.51 Aligned_cols=153 Identities=17% Similarity=0.217 Sum_probs=105.2
Q ss_pred HHHHHhhhccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecccCCCC-------ceecccccCcccCchhhcc
Q 001706 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-------HTMSAVAGSFGYFAPEYAY 882 (1024)
Q Consensus 810 ~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~ 882 (1024)
+.+++.|+.|+|.. .++||+.|.|++|.++..+.+|++.|+.+......... ...........|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34556899999986 48999999999999999999999999998654332111 1111122446799999999
Q ss_pred CCCCCCCCcchhHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCC
Q 001706 883 TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL 962 (1024)
Q Consensus 883 ~~~~~~~sDvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 962 (1024)
+...+.++|+||+||++|.+..|+.+............... ...+.. ...+..+.+.++.+-+.+++..+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-~~~~~~---------~~~~s~~~p~el~~~l~k~l~~~ 252 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-NLLNAG---------AFGYSNNLPSELRESLKKLLNGD 252 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-cccccc---------cccccccCcHHHHHHHHHHhcCC
Confidence 99999999999999999999966655432222111111100 000000 11122344578888899999999
Q ss_pred CCCCCCHHHHHH
Q 001706 963 PSSRPSMKEVLQ 974 (1024)
Q Consensus 963 P~~RPs~~evl~ 974 (1024)
+..||++.++..
T Consensus 253 ~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 253 SAVRPTLDLLLS 264 (700)
T ss_pred cccCcchhhhhc
Confidence 999998777653
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.7e-07 Score=104.49 Aligned_cols=154 Identities=19% Similarity=0.219 Sum_probs=99.8
Q ss_pred chhHhhhCCCccceeeecCcEEEEEEEEcCCCcEEEEEEeccchhh----------------------------------
Q 001706 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL---------------------------------- 730 (1024)
Q Consensus 685 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------------------------- 730 (1024)
..++...+|+. +.|+.++-|.||+|+... |+.||||+.+.....
T Consensus 120 ~iee~F~eF~~-~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e 197 (517)
T COG0661 120 PIEELFSEFEP-EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDE 197 (517)
T ss_pred CHHHHHHHcCC-CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHH
Confidence 34445556654 689999999999999974 999999997522110
Q ss_pred ---hHHHHHHHHHHHHHHhccc-----cCceeeEEEEEecCCceEEEEeccCCCCHHHHhccCccccccCCCCcccccCC
Q 001706 731 ---NQKLEKEFIAEIEILGTIR-----HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802 (1024)
Q Consensus 731 ---~~~~~~~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~ 802 (1024)
.-..+-++.+|+.-+.+++ .|.+.--.-|++-.....++|||++|..+.+...-... ..+
T Consensus 198 ~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~------------g~d 265 (517)
T COG0661 198 FEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA------------GID 265 (517)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc------------CCC
Confidence 0011224666777666663 34443323334445678999999999888887432221 233
Q ss_pred hHHHHHHHHHHHhh-hccccccCCCceEeCCCCCCCEEECCCCcEEEeccccceecc
Q 001706 803 WPTRLQIAIGAAQG-LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA 858 (1024)
Q Consensus 803 ~~~~~~i~~~i~~~-l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DFgla~~~~ 858 (1024)
... ++..++++ +..+-.. |++|+|.+|.||+++.+|.+.+.|||+...+.
T Consensus 266 ~k~---ia~~~~~~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 266 RKE---LAELLVRAFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHH---HHHHHHHHHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 222 22222222 1111113 89999999999999999999999999987664
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.2e-09 Score=117.50 Aligned_cols=126 Identities=29% Similarity=0.315 Sum_probs=87.5
Q ss_pred CCCEEEcccCcCCCCcccccCCccccceeecCCccccccCcccccCCCCCcEEEccCcccCCCCccc-cccccccCeEec
Q 001706 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ-IVSWTSLNNLNL 535 (1024)
Q Consensus 457 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 535 (1024)
.|...+.+.|++. .....+.-++.|+.|||++|+++.. - .+..+++|++|||+.|+|. .+|.. ...+ .|+.|+|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v-~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV-D-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh-H-HHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 3667777777777 4445566677788888888888733 2 6777888888888888887 55543 2233 3888888
Q ss_pred cCccccCccchhhhhccccceecccCCcCCCCCCC-ccccc-ccccccccCCcccc
Q 001706 536 ARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP-EIGQL-KLNTFNLSSNKLYG 589 (1024)
Q Consensus 536 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~ip~-~~~~l-~l~~l~l~~N~l~g 589 (1024)
++|.++. + ..+.+|.+|+.||+|+|-|++.--- .+..+ .|..|+|.+|++..
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 8888872 2 4677888888888888888762111 12233 47788888888864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1024 | ||||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 5e-50 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-42 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-49 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-42 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 4e-49 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 8e-49 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 4e-35 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-34 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-34 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-33 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-33 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-31 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-24 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-24 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-22 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-21 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-14 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 8e-13 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 4e-08 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-19 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-19 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-19 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 8e-19 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 9e-19 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 9e-19 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-18 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 1e-18 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-18 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-18 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-18 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-18 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-18 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-18 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-18 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-18 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-18 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-18 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-18 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-18 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 2e-18 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-18 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 3e-18 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-18 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-18 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-18 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-18 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 4e-18 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-18 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 5e-18 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 8e-18 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 9e-18 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-18 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-17 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-17 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-17 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-17 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-17 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-17 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 2e-17 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-17 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-17 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-17 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-17 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-17 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-17 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 2e-17 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-17 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-17 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-17 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-17 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-17 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-17 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-17 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-17 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-17 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-17 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-17 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-17 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 3e-17 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 3e-17 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-17 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 3e-17 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-17 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-17 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 3e-17 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 3e-17 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-17 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-17 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-17 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 4e-17 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 4e-17 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-17 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 5e-17 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 5e-17 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 5e-17 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 5e-17 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 6e-17 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 6e-17 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-17 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-17 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-17 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-17 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 7e-17 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 7e-17 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 7e-17 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-17 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-17 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 9e-17 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-16 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 1e-16 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-16 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 1e-16 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 1e-16 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 1e-16 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 1e-16 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 1e-16 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-16 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 1e-16 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-16 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-16 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 1e-16 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-16 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-16 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-16 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-16 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-16 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 1e-16 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-16 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-16 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-16 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-16 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-16 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-16 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-16 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-16 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-16 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 3e-16 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-16 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 3e-16 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 3e-16 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 3e-16 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-16 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-16 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-16 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-16 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 4e-16 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-16 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 4e-16 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 4e-16 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-16 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-16 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-16 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 4e-16 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-16 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 5e-16 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 5e-16 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-16 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-16 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 6e-16 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 6e-16 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 6e-16 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 6e-16 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 7e-16 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 8e-16 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 8e-16 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 8e-16 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 9e-16 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 9e-16 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 9e-16 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 9e-16 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 1e-15 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 1e-15 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 1e-15 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-15 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-15 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 1e-15 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 1e-15 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 1e-15 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-15 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-15 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-15 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 1e-15 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-15 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 1e-15 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-15 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-15 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-15 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 3e-15 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 3e-15 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 3e-15 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-15 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-15 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 4e-15 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-15 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-15 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 5e-15 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 5e-15 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 5e-15 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-15 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 6e-15 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 6e-15 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-15 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 7e-15 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 7e-15 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 7e-15 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 8e-15 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 9e-15 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 9e-15 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-14 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-14 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-14 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-14 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-14 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-14 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-14 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-14 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 1e-14 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-14 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-14 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-14 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 2e-14 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-14 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-14 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-14 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-14 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 3e-14 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-14 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 3e-14 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-14 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 3e-14 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-14 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 4e-14 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-14 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 4e-14 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 4e-14 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 4e-14 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 4e-14 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 5e-14 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-14 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-14 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 5e-14 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 5e-14 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 5e-14 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 6e-14 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-14 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-14 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-14 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 6e-14 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 6e-14 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 6e-14 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 7e-14 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-14 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 7e-14 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 7e-14 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 7e-14 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 7e-14 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 8e-14 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 8e-14 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-14 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 8e-14 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-14 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-14 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 9e-14 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 9e-14 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-13 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-13 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-13 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-13 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-13 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-13 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-13 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-13 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-13 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-13 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-13 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-13 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 2e-13 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-13 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-13 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-13 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-13 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-13 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-13 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-13 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-13 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-13 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 2e-13 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-13 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-13 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-13 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 2e-13 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-13 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-13 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-13 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-13 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-13 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-13 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-13 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-13 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 3e-13 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-13 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-13 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-13 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-13 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 3e-13 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 3e-13 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 3e-13 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 3e-13 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 3e-13 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-13 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-13 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-13 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-13 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-13 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-13 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 4e-13 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 4e-13 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 4e-13 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-13 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-13 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-13 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-13 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 5e-13 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 5e-13 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 5e-13 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 5e-13 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-13 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 6e-13 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 6e-13 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 6e-13 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-13 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 6e-13 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 6e-13 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 7e-13 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 7e-13 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 7e-13 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 7e-13 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 7e-13 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 7e-13 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 8e-13 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 8e-13 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 8e-13 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-13 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 8e-13 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 8e-13 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 8e-13 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 8e-13 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 8e-13 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 9e-13 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-13 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-13 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 9e-13 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 9e-13 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 9e-13 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 1e-12 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-12 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 1e-12 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 1e-12 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-12 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 1e-12 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-12 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-12 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-12 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-12 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 2e-12 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-12 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-12 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-12 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-12 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-12 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-12 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-12 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-12 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 2e-12 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 3e-12 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-12 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-12 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-12 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-12 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 3e-12 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-12 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 4e-12 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-12 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 5e-12 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 5e-12 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-12 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 6e-12 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-12 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 6e-12 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 6e-12 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 7e-12 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 7e-12 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 7e-12 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 7e-12 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 8e-12 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 8e-12 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 9e-12 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-11 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-11 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-11 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-11 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 1e-11 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-11 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-11 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-11 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-11 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 1e-11 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-11 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-11 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 2e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-11 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-11 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-11 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-11 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-11 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-11 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 3e-11 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-11 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-11 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 3e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-11 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 3e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-11 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 4e-11 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-11 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-11 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 4e-11 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 5e-11 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-11 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 5e-11 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 5e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 5e-11 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 5e-11 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-11 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 6e-11 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 6e-11 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 6e-11 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 6e-11 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 6e-11 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-11 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 6e-11 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 6e-11 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 6e-11 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 6e-11 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 7e-11 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 7e-11 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 8e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 8e-11 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 8e-11 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 8e-11 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 8e-11 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 9e-11 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 9e-11 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 9e-11 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 9e-11 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 9e-11 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 9e-11 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 1e-10 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 1e-10 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 1e-10 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 1e-10 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-10 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 1e-10 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 1e-10 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-10 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-10 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-10 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 1e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-10 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 1e-10 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 1e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 1e-10 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-10 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 1e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-10 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-10 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-10 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-10 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-10 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 1e-10 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 1e-10 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 1e-10 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-10 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-10 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-10 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-10 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-10 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-10 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-10 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-10 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-10 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 1e-10 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 1e-10 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 1e-10 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 1e-10 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 2e-10 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-10 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-10 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-10 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 2e-10 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 2e-10 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 2e-10 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-10 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 2e-10 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 2e-10 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-10 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-10 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-10 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-10 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-10 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-10 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-10 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-10 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-10 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-10 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-10 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-10 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 2e-10 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-10 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-10 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-10 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-10 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-10 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-10 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 2e-10 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-10 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-10 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 2e-10 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-10 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 2e-10 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 2e-10 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-10 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 2e-10 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 2e-10 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 2e-10 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-10 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 2e-10 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 2e-10 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-10 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-10 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 2e-10 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-10 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-10 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-10 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-10 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-10 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-10 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-10 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-10 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 3e-10 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-10 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-10 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 3e-10 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-10 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 3e-10 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-10 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 3e-10 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 3e-10 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-10 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-10 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-10 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-10 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 3e-10 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 3e-10 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 3e-10 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-10 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-10 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-10 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-10 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-10 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-10 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-10 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 3e-10 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-10 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 4e-10 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 4e-10 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 4e-10 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 4e-10 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 4e-10 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-10 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-10 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-10 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 4e-10 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 4e-10 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 4e-10 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 4e-10 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 4e-10 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-10 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 4e-10 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 4e-10 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-10 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 4e-10 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 4e-10 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 5e-10 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-10 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-10 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-10 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-10 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 5e-10 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 5e-10 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-10 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 5e-10 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-10 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-10 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 5e-10 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-10 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 5e-10 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-10 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 5e-10 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 5e-10 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 5e-10 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 5e-10 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-10 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 5e-10 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 5e-10 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 5e-10 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-10 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 5e-10 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 6e-10 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 6e-10 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 6e-10 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 6e-10 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 7e-10 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-10 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 7e-10 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 7e-10 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 8e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 8e-10 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 8e-10 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 8e-10 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 8e-10 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 8e-10 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 9e-10 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 9e-10 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 9e-10 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 1e-09 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-09 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-09 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-09 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 1e-09 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-09 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 1e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-09 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-09 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-09 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-09 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-09 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 1e-09 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 1e-09 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 1e-09 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-09 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 1e-09 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-09 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-09 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 2e-09 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 2e-09 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-09 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 2e-09 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 2e-09 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 2e-09 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 2e-09 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-09 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-09 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 2e-09 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-09 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 2e-09 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 2e-09 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-09 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-09 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-09 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 2e-09 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 2e-09 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-09 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 3e-09 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 3e-09 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-09 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-09 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-09 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 3e-09 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 3e-09 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 3e-09 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-09 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-09 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 3e-09 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 3e-09 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 3e-09 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 3e-09 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-09 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 3e-09 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-09 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 3e-09 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 3e-09 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 4e-09 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 4e-09 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 4e-09 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-09 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 4e-09 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-09 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 4e-09 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 4e-09 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 4e-09 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 5e-09 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 5e-09 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-09 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 5e-09 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 5e-09 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 5e-09 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 5e-09 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 5e-09 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-09 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 5e-09 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 5e-09 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 5e-09 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 5e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 5e-09 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 6e-09 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 6e-09 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 6e-09 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 6e-09 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 6e-09 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 6e-09 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 6e-09 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 6e-09 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 6e-09 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-09 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 7e-09 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-09 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 7e-09 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 7e-09 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 7e-09 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 8e-09 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 8e-09 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 8e-09 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 8e-09 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 8e-09 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 8e-09 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 9e-09 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 9e-09 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 9e-09 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 9e-09 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 9e-09 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 9e-09 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 9e-09 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 9e-09 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 1e-08 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 1e-08 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-08 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 1e-08 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-08 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-08 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-08 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-08 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 1e-08 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 1e-08 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 1e-08 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-08 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 1e-08 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 1e-08 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-08 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-08 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 1e-08 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-08 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 1e-08 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-08 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 1e-08 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 1e-08 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-08 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 2e-08 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-08 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-08 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-08 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-08 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-08 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 2e-08 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 2e-08 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-08 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-08 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 2e-08 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 2e-08 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-08 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 2e-08 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 3e-08 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 3e-08 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-08 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-08 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-08 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-08 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 3e-08 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-08 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-08 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-08 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 3e-08 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 3e-08 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-08 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-08 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-08 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 3e-08 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-08 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-08 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-08 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-08 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-08 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-08 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 3e-08 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 3e-08 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 4e-08 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 4e-08 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 4e-08 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 4e-08 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 4e-08 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 4e-08 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-08 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-08 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-08 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 5e-08 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 5e-08 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 6e-08 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 6e-08 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 6e-08 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 7e-08 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 7e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 8e-08 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 8e-08 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 8e-08 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 8e-08 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 8e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-08 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 8e-08 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 9e-08 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 9e-08 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 9e-08 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 9e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-08 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 9e-08 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 1e-07 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-07 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 1e-07 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 1e-07 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 1e-07 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 1e-07 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 1e-07 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-07 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 1e-07 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 1e-07 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-07 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-07 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 1e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-07 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 2e-07 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 2e-07 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 2e-07 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 2e-07 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 2e-07 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 2e-07 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-07 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-07 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-07 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-07 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-07 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 2e-07 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 2e-07 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-07 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-07 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-07 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 2e-07 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 2e-07 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 3e-07 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 3e-07 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-07 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-07 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 3e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-07 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 4e-07 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 5e-07 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 6e-07 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 7e-07 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 7e-07 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 7e-07 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 7e-07 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 7e-07 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 8e-07 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 8e-07 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 8e-07 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 8e-07 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 8e-07 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 9e-07 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 1e-06 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 1e-06 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 1e-06 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-06 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-06 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-06 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-06 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-06 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-06 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-06 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 2e-06 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 2e-06 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 3e-06 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 3e-06 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 3e-06 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 3e-06 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 3e-06 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 3e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 4e-06 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 4e-06 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-06 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 5e-06 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 5e-06 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 5e-06 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 6e-06 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 6e-06 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 6e-06 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 6e-06 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 6e-06 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 6e-06 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 6e-06 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 6e-06 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 6e-06 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 6e-06 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 6e-06 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 7e-06 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 7e-06 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 7e-06 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-06 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 7e-06 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 7e-06 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 8e-06 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 8e-06 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-06 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 8e-06 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-06 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 8e-06 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-06 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 1e-05 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 1e-05 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-05 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 1e-05 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 1e-05 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 1e-05 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 1e-05 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-05 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-05 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 1e-05 | ||
| 4b8c_D | 727 | Nuclease Module Of The Yeast Ccr4-Not Complex Lengt | 2e-05 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-05 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-05 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 4e-05 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 4e-05 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 4e-05 | ||
| 2z7x_A | 549 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 5e-05 | ||
| 2z80_A | 353 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 5e-05 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 5e-05 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 5e-05 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 6e-05 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 6e-05 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 7e-05 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 7e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 7e-05 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 7e-05 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 8e-05 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 8e-05 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 8e-05 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 9e-05 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 1e-04 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 1e-04 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 1e-04 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 1e-04 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 2e-04 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-04 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 2e-04 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 2e-04 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 2e-04 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 2e-04 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 3e-04 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 3e-04 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 4e-04 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 5e-04 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 6e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 6e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 7e-04 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 8e-04 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 8e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 8e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 8e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 8e-04 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 9e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 9e-04 |
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex Length = 727 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 549 | Back alignment and structure |
|
| >pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 353 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 469 bits (1210), Expect = e-152
Identities = 164/594 (27%), Positives = 263/594 (44%), Gaps = 26/594 (4%)
Query: 33 NTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDIT---QKI 89
E L++ K L + L W+S +PC + +TC + VT I L K + +
Sbjct: 10 LYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAV 69
Query: 90 PPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSD--IDRISGL 147
+ L L ++ LS++ I G F L +LDLS+N GP+ + + SGL
Sbjct: 70 SSSLLSLTGLESLFLSNSHINGSVSGFK-CSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128
Query: 148 QCIDLGGNNFSGDIPRSIG-RLSELQTLYLYMNEFNGTFPKEI---GDLSNLEVLGLAYN 203
+ +++ N S G +L+ L+ L L N +G L+ L ++ N
Sbjct: 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGN 188
Query: 204 SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGL 263
++ L+ L ++ N IP + + S+L+ L ++GN L G +
Sbjct: 189 -KISG---DVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 243
Query: 264 FLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLF 322
L L + N G IP L + L+ N TG IP+ G L L L
Sbjct: 244 STCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 302
Query: 323 SNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPE-IGLHSALEGFEVSTNQFSGPLPEN 381
NH G VP G L+ + +N+ SG LP + + L+ ++S N+FSG LPE+
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362
Query: 382 LCAG-GVLQGVVAFENNLSGAVPKSLGNC--RTLRTVQLYSNRFSGELPTGLWTTFNLSS 438
L L + NN SG + +L TL+ + L +N F+G++P L L S
Sbjct: 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422
Query: 439 LMLSDNTISGELPS--KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEI 496
L LS N +SG +PS + L L++ N G+I + + K L N +GEI
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482
Query: 497 PVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVS 556
P L++ ++LN + L N+L+G++P I +L L L+ N SG IP +G ++
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 542
Query: 557 LDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNL 610
LDL+ N F+G IP + + + +++N + G N NL
Sbjct: 543 LDLNTNLFNGTIPAAMFKQ---SGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 463 bits (1195), Expect = e-150
Identities = 164/573 (28%), Positives = 261/573 (45%), Gaps = 14/573 (2%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
++ + + + + IP + D L +D+S N + G+F + CT+L+ L++S N
Sbjct: 199 CVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFNGTFPKEIG 190
FVGPIP + LQ + L N F+G+IP + G L L L N F G P G
Sbjct: 258 QFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315
Query: 191 DLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLS-SLEILA 249
S LE L L+ N NF + ++ LK L ++ GE+PE+++NLS SL L
Sbjct: 316 SCSLLESLALSSN-NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374
Query: 250 LNGNHLEGAIPSGLF--LLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSI 306
L+ N+ G I L N L +L+L +N +G+IP ++ L + LS N L+G+I
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
P G L L+ L L+ N L GE+P + + L+ + N L+G +P + + L
Sbjct: 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL 426
+S N+ +G +P+ + L + N+ SG +P LG+CR+L + L +N F+G +
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 427 PTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFK 486
P ++ + + + + F G +
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 487 ASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPK 546
++ ++ G + + L + N LSG +P +I S L LNL N++SG IP
Sbjct: 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Query: 547 AIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDE--FNNLAYDDS 603
+G L + LDLS N+ G IP + L L +LS+N L G IP+ F
Sbjct: 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP-PAK 733
Query: 604 FLNNSNLCVKNPIINLPKCPSRFRNSDKISSKH 636
FLNN LC P+ + + S H
Sbjct: 734 FLNNPGLC-GYPLPRCDPSNADGYAHHQRSHHH 765
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 262 bits (673), Expect = 4e-75
Identities = 91/378 (24%), Positives = 156/378 (41%), Gaps = 40/378 (10%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
N++ + L++ T KIPP + + L ++ LS N + G P L + +KL++L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
N G IP ++ + L+ + L N+ +G+IP + + L + L N G PK I
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILA 249
G L NL +L L+ N + G IP + + SL L
Sbjct: 511 GRLENLAILKLSNN--------------------------SFSGNIPAELGDCRSLIWLD 544
Query: 250 LNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVE---ALKLTDIDLSMNNLTGSI 306
LN N G IP+ +F + + N ++G+ ++ K ++ G
Sbjct: 545 LNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600
Query: 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
E+ +L + S G + ++ + N LSG +P EIG L
Sbjct: 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAF---ENNLSGAVPKSLGNCRTLRTVQLYSNRFS 423
+ N SG +P+ + G L+G+ N L G +P+++ L + L +N S
Sbjct: 661 LNLGHNDISGSIPDEV---GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 424 GELPTG-LWTTFNLSSLM 440
G +P + TF + +
Sbjct: 718 GPIPEMGQFETFPPAKFL 735
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 1e-56
Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 29/291 (9%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
P+ ++ + L D+T +IP + + NL I LS+N + GE P+++ L
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
L LS N F G IP+++ L +DL N F+G IP ++ + S + N G
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKR 574
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL 245
I + + A N G E ++ LS+
Sbjct: 575 YVYIKNDGMKKECHGAGNLL------------------------EFQGIRSEQLNRLSTR 610
Query: 246 EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTG 304
+ G ++ L + N+LSG IP + ++ L ++L N+++G
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 305 SIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLP 355
SIP+E G L+ L +L L SN L G +P ++ + L + + NN+LSG +P
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-26
Identities = 32/157 (20%), Positives = 56/157 (35%)
Query: 47 LGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSS 106
+ + + + + + L +++S
Sbjct: 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 617
Query: 107 NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIG 166
G N + LD+S N G IP +I + L ++LG N+ SG IP +G
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677
Query: 167 RLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN 203
L L L L N+ +G P+ + L+ L + L+ N
Sbjct: 678 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 333 bits (856), Expect = e-106
Identities = 114/291 (39%), Positives = 166/291 (57%), Gaps = 27/291 (9%)
Query: 695 ESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA 751
N++G GG G+VY+ G G VAVKR+ R Q E +F E+E++ H
Sbjct: 34 NKNILGRGGFGKVYK----GRLADGTLVAVKRLKEERT--QGGELQFQTEVEMISMAVHR 87
Query: 752 NIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N+++L C++ +LLVY YM N S+ L R S Q L WP R +IA
Sbjct: 88 NLLRLRGFCMTP-TERLLVYPYMANGSVASCLRERPES---------QPPLDWPKRQRIA 137
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+G+A+GL Y+H C P+IIHRDVK++NILLD EF+A + DFGLAK L + H +AV
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVR 196
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA-----NYGDEHTSLAEWAWRHY 925
G+ G+ APEY T K +EK D++ +GV+LLEL+TG+ A D+ L +W
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+EK + +D + EE+ + ++AL+CT + P RP M EV+++L
Sbjct: 257 -KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 312 bits (801), Expect = 2e-98
Identities = 104/307 (33%), Positives = 153/307 (49%), Gaps = 29/307 (9%)
Query: 678 SFHQL-----GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN- 731
SF++L F E N +G GG G VY+ +N VAVK++ +
Sbjct: 16 SFYELKNVTNNFDER---PISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITT 70
Query: 732 QKLEKEFIAEIEILGTIRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLV 790
++L+++F EI+++ +H N+V+L ++ LVY YM N SL L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRLSCLDG--- 126
Query: 791 SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850
L W R +IA GAA G+ ++H + IHRD+KS+NILLD F AKI+D
Sbjct: 127 -------TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISD 176
Query: 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA-N 909
FGLA+ K + S + G+ Y APE ++ K DIYSFGVVLLE++TG A +
Sbjct: 177 FGLARASEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
E L + EEK I D +DK + + + +Y +A C + RP +
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 970 KEVLQIL 976
K+V Q+L
Sbjct: 295 KKVQQLL 301
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 307 bits (790), Expect = 8e-97
Identities = 105/294 (35%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 695 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
LIG G G+VY+ + G VA+KR + +Q +EF EIE L RH ++V
Sbjct: 43 HKFLIGHGVFGKVYKGVLRD-GAKVALKRR--TPESSQG-IEEFETEIETLSFCRHPHLV 98
Query: 755 KLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L C N +L+Y+YMEN +L R L+G + W RL+I IGA
Sbjct: 99 SLIGFCDE-RNEMILIYKYMENGNLKRHLYGSDL---------PTMSMSWEQRLEICIGA 148
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A+GL Y+H IIHRDVKS NILLD F KI DFG++K + + H + V G+
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTL 205
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA---NYGDEHTSLAEWAWRHYAEEKP 930
GY PEY ++ EK D+YSFGVVL E++ + A + E +LAEWA
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VESHNNGQ 264
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTEN 984
+ +D +A+ E + A+ C + RPSM +VL L +
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 1e-84
Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 40/336 (11%)
Query: 33 NTEERTILLNLKQQLGNPPSLQSWTSTSSPCD--WPEITCT----FNSVTGISLRHKDI- 85
N +++ LL +K+ LGNP +L SW T+ C+ W + C V + L ++
Sbjct: 4 NPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 86 -TQKIPPIICDLKNLTTIDLSS-NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR 143
IP + +L L + + N++ G P + T+L L ++ G IP + +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 144 ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNL-EVLGLAY 202
I L +D N SG +P SI L L + N +G P G S L + ++
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 203 NSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSG 262
N L G+IP +NL +L + L+ N LEG
Sbjct: 184 N--------------------------RLTGKIPPTFANL-NLAFVDLSRNMLEGDASVL 216
Query: 263 LFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLF 322
N ++ L N L+ ++ + L +DL N + G++P+ +LK L L +
Sbjct: 217 FGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276
Query: 323 SNHLSGEVPASIGKIPALKKFKVFNNSL--SGVLPP 356
N+L GE+P G + NN LP
Sbjct: 277 FNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 2e-60
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 26/297 (8%)
Query: 293 TDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGE--VPASIGKIPALKKFKVFN-NS 349
D G + + + + L L +L +P+S+ +P L + N+
Sbjct: 29 PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINN 88
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
L G +PP I + L ++ SG +P+ L L + N LSG +P S+ +
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFS 469
L + NR SG +P + S L T + IS NR +
Sbjct: 149 PNLVGITFDGNRISGAIPDSY---GSFSKL------------------FTSMTISRNRLT 187
Query: 470 GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS 529
G+I + NL S N+ G+ V S + + L N L+ L + +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKN 245
Query: 530 LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNK 586
LN L+L N + G +P+ + L + SL++S N GEIP + + ++NK
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 7e-47
Identities = 60/208 (28%), Positives = 87/208 (41%), Gaps = 10/208 (4%)
Query: 401 AVPKSLGNCRTLR----TVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELP-SKTA 455
+ K LGN TL T + + G L T+ +++L LS + P +
Sbjct: 13 QIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72
Query: 456 WNLTRLEI----SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
NL L N G I + L ++ SG IP L+ + L TL
Sbjct: 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 512 DGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL-VMVSLDLSGNQFSGEIPP 570
N LSG LP I S +L + N +SG IP + GS + S+ +S N+ +G+IPP
Sbjct: 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP 192
Query: 571 EIGQLKLNTFNLSSNKLYGNIPDEFNNL 598
L L +LS N L G+ F +
Sbjct: 193 TFANLNLAFVDLSRNMLEGDASVLFGSD 220
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 5e-82
Identities = 106/552 (19%), Positives = 183/552 (33%), Gaps = 41/552 (7%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
++T ++L H + + LT++D+ N+I PE L+ L+L N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
+ L + L N+ + L TL L N + T
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
L NL+ L L+ N ++ LK L ++ + P + L L LN
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLN 203
Query: 252 GNHLEGAIPSGLFL---LNNLTQLFLYDNILSGEIPSSVEALK---LTDIDLSMNNLTGS 305
L ++ L L ++ L L ++ LS ++ LK LT +DLS NNL
Sbjct: 204 NVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263
Query: 306 IPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALE 365
+ F L L+ L N++ S+ + ++ + + +
Sbjct: 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI----------- 312
Query: 366 GFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 425
S + L+ + +N++ G L+ + L ++ S
Sbjct: 313 ----SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368
Query: 426 LPTGL----WTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI---SNNRFSGQIQRGV-G 477
T L L L+ N IS + S L LE+ N ++
Sbjct: 369 TLTNETFVSLAHSPLHILNLTKNKISK-IESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 478 SWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG--KLPSQIVSWTSLNNLNL 535
+N+ S N + + L L+L L PS +L L+L
Sbjct: 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDL 487
Query: 536 ARNELSGEIPKAIGSLLVMVSLDLSGNQFS--------GEIPPEIGQL-KLNTFNLSSNK 586
+ N ++ + L + LDL N + G + L L+ NL SN
Sbjct: 488 SNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547
Query: 587 LYGNIPDEFNNL 598
+ F +L
Sbjct: 548 FDEIPVEVFKDL 559
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 2e-74
Identities = 114/543 (20%), Positives = 177/543 (32%), Gaps = 39/543 (7%)
Query: 98 NLTTIDLSSN---SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
+ D S +P + P T + L+L+ N ++ R S L +D+G
Sbjct: 5 SHEVADCSHLKLTQVPDDLP------TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGF 58
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE 214
N S P +L L+ L L NE + K +NL L L NS K
Sbjct: 59 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI--KNNP 116
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN--LTQL 272
F K L TL ++ L L +L+ L L+ N ++ L + N L +L
Sbjct: 117 FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176
Query: 273 FLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFG---KLKNLQLLGLFSNHLSG 328
L N + P A+ +L + L+ L S+ E+ +++ L L ++ LS
Sbjct: 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST 236
Query: 329 EVPASIG--KIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLP------- 379
+ K L + N+L+ V LE F + N
Sbjct: 237 TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLF 296
Query: 380 --ENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLS 437
L +L S + L + + N G NL
Sbjct: 297 NVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLK 356
Query: 438 SLMLSDNTISGELPSKTAW------NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNL 491
L LS++ S + + L L ++ N+ S +L V N
Sbjct: 357 YLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNE 416
Query: 492 FSGEIPV-ELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG--EIPKAI 548
E+ E L ++ + L NK + SL L L R L P
Sbjct: 417 IGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 476
Query: 549 GSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNN 607
L + LDLS N + + L KL +L N L + N
Sbjct: 477 QPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL-ARLWKHANPGGPIYFLKGL 535
Query: 608 SNL 610
S+L
Sbjct: 536 SHL 538
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 3e-71
Identities = 106/571 (18%), Positives = 184/571 (32%), Gaps = 38/571 (6%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
++L+H +++Q NLT + L SNSI L LDLS N
Sbjct: 78 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTK 137
Query: 138 PSDIDRISGLQCIDLGGNNFSGDIPR--SIGRLSELQTLYLYMNEFNGTFPKEIGDLSNL 195
++ LQ + L N I S L+ L L N+ P + L
Sbjct: 138 LGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRL 197
Query: 196 EVLGLAYNS-NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNL--SSLEILALNG 252
L L ++ L ++ + L L ++L +L L+
Sbjct: 198 FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 257
Query: 253 NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----------LTDIDLSMNNL 302
N+L L L FL N + S+ L T +S+ +L
Sbjct: 258 NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASL 317
Query: 303 TGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGL-- 360
F LK L+ L + N + G + LK + N+ S
Sbjct: 318 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVS 377
Query: 361 --HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKS-LGNCRTLRTVQL 417
HS L ++ N+ S + G L+ + N + + + + L
Sbjct: 378 LAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYL 437
Query: 418 YSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW----NLTRLEISNNRFSGQIQ 473
N++ +L LML + S + + NLT L++SNN +
Sbjct: 438 SYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497
Query: 474 RGVGSWKNLIVFKASNN--------LFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIV 525
+ + L + +N G L LSHL+ L L+ N
Sbjct: 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557
Query: 526 SWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL--KLNTFNLS 583
L ++L N L+ + + + SL+L N + G L ++
Sbjct: 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMR 617
Query: 584 SNKLYGNIPDEFNNLAYDDSFLNNSNLCVKN 614
N ++A+ +++N ++ +
Sbjct: 618 FNPFDCTCE----SIAWFVNWINETHTNIPE 644
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-22
Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 2/167 (1%)
Query: 433 TFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLF 492
T + S ++ ++P N+T L +++N+ + L N
Sbjct: 3 TVSHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 493 SGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL 552
S P L L L L N+LS T+L L+L N +
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 553 VMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNL 598
+++LDLS N S QL L LS+NK+ +E +
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIF 168
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 2e-81
Identities = 86/609 (14%), Positives = 177/609 (29%), Gaps = 92/609 (15%)
Query: 22 SIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEIT--CTFNSVTGIS 79
+P ++ + ++ L + L Q T +W + + G+S
Sbjct: 17 IVPIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVS 76
Query: 80 LRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPS 139
L +T + L G P+ + T+L+ L L +
Sbjct: 77 LN-------------SNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERL 123
Query: 140 DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLG 199
P+ I + + TF +++
Sbjct: 124 --------------------FGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIK 163
Query: 200 LAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAI 259
NS+ + I + K + N I + +A+ L+ L + +
Sbjct: 164 DCINSDPQQKSIKKSSRITLKDTQIGQLS-NNITFVSKAVMRLTKLRQFYMGNSPFVAEN 222
Query: 260 PSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQL 318
+ N Y + LK LTD+++ +P L +QL
Sbjct: 223 ICEAWENENSEYAQQY-----KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277
Query: 319 LGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQF-SGP 377
+ + N + + ++ + N + P
Sbjct: 278 INVACNRGIS----------------GEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFP 321
Query: 378 LPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NL 436
+ +L L + N L G + G+ L ++ L N+ + +P +
Sbjct: 322 VETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLASLNLAYNQITE-IPANFCGFTEQV 379
Query: 437 SSLMLSDNTISGELPSKTAW----NLTRLEISNNRFSG-------QIQRGVGSWKNLIVF 485
+L + N + +P+ ++ ++ S N + N+
Sbjct: 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSI 438
Query: 486 KASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG-------KLPSQIVSWTSLNNLNLARN 538
SNN S ++ S L+++ L GN L+ + L +++L N
Sbjct: 439 NLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFN 498
Query: 539 ELSGEIPKAI--GSLLVMVSLDLSGNQFSGEIPPEIGQLK-------LNTFNLSSNKLYG 589
+L+ + +L +V +DLS N FS P + N + N+
Sbjct: 499 KLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556
Query: 590 NIPDEFNNL 598
P+
Sbjct: 557 EWPEGITLC 565
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 258 bits (660), Expect = 1e-74
Identities = 72/559 (12%), Positives = 153/559 (27%), Gaps = 85/559 (15%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
F+ + + + I T I SN+I + + TKL+ +
Sbjct: 156 EDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMG 214
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
+ FV + + L +L + +Y P +
Sbjct: 215 NSPFVAENIC-----EAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFL 269
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILA 249
L ++++ +A N + + ++I+
Sbjct: 270 KALPEMQLINVACNRGISGEQLK------------------DDWQALADAPVGEKIQIIY 311
Query: 250 LNGNHL-EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPE 308
+ N+L + + L + L L N L G++P+ +KL ++L+ N +T
Sbjct: 312 IGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQITEIPAN 371
Query: 309 EFGKLKNLQLLGLFSNHLSGEVPA--SIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
G + ++ L N L +P + + N + V
Sbjct: 372 FCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG----------- 419
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL 426
F L G + + N +S + L ++ L N + +
Sbjct: 420 -----KNFDP-LDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-I 472
Query: 427 PTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSG-QIQRGVGSWKNLIVF 485
P N + LT +++ N+ + + L+
Sbjct: 473 PKNSLKDENENFKNTY--------------LLTSIDLRFNKLTKLSDDFRATTLPYLVGI 518
Query: 486 KASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIP 545
S N FS P + + S L + N + N E P
Sbjct: 519 DLSYNSFSK-FPTQPLNSSTLKGFGI------------------RNQRDAQGNRTLREWP 559
Query: 546 KAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNN---LAYDD 602
+ I + L + N + +I ++ ++ N
Sbjct: 560 EGITLCPSLTQLQIGSNDIRK-VNEKITP-NISVLDIKDNPNISIDLSYVCPYIEAGMYM 617
Query: 603 SFLNNSNLCVKNPIINLPK 621
F + + +++ +
Sbjct: 618 LFYDKTQDIRGCDALDIKR 636
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 4e-13
Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 11/156 (7%)
Query: 461 LEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKL 520
L N G + +W F +++ + V L S + L L+G SG++
Sbjct: 42 LNGKNWSQQGFGTQPGANWN----FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRV 97
Query: 521 PSQIVSWTSLNNLNLARNELSG----EIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK 576
P I T L L L + PK I + + + +
Sbjct: 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPRED 157
Query: 577 ---LNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSN 609
L ++S+ +I D SN
Sbjct: 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSN 193
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-08
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 9/113 (7%)
Query: 515 KLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ 574
G +W N N + + ++ S + L L G SG +P IGQ
Sbjct: 48 SQQGFGTQPGANW----NFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQ 103
Query: 575 L-KLNTFNLSSNKLYGN----IPDEFNNLAYDDSFLNNSNLCVKNPIINLPKC 622
L +L L S+ N P + D+ K + P+
Sbjct: 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPRE 156
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 268 bits (687), Expect = 1e-78
Identities = 109/559 (19%), Positives = 189/559 (33%), Gaps = 41/559 (7%)
Query: 62 PCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCT 121
PC ++T + + IP + + +DLS N + ++
Sbjct: 2 PCV-----EVVPNIT-YQCMELNFYK-IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFP 52
Query: 122 KLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF 181
+LQ LDLS+ +S L + L GN + LS LQ L
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 182 NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSN 241
IG L L+ L +A+N + +P F L L+ L ++ + +
Sbjct: 113 ASLENFPIGHLKTLKELNVAHN-LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171
Query: 242 LSSLEI----LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV----EALKLT 293
L + + L L+ N + I G F L +L L +N S + + L++
Sbjct: 172 LHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVH 230
Query: 294 DIDL----SMNNLTGSIPEEFGKLKNLQLLGLFSNHLS---GEVPASIGKIPALKKFKVF 346
+ L + NL L NL + +L ++ + + F +
Sbjct: 231 RLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290
Query: 347 NNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSL 406
+ ++ V + + E+ +F L + L + G S
Sbjct: 291 SVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLT-----FTSNKGGNAFSE 343
Query: 407 GNCRTLRTVQLYSNR--FSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW--NLTRLE 462
+ +L + L N F G + T +L L LS N + + S L L+
Sbjct: 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 402
Query: 463 ISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLP 521
++ + V S +NLI S+ LS L L + GN
Sbjct: 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 462
Query: 522 SQIVSW-TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNT 579
I + +L L+L++ +L P A SL + L++S N F L L
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 522
Query: 580 FNLSSNKLYGNIPDEFNNL 598
+ S N + + E +
Sbjct: 523 LDYSLNHIMTSKKQELQHF 541
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 218 bits (557), Expect = 6e-61
Identities = 91/531 (17%), Positives = 173/531 (32%), Gaps = 52/531 (9%)
Query: 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPG-EFPEFLYNCTKLQNLDLSQNY 132
S+ + ++ I LK L ++++ N I + PE+ N T L++LDLS N
Sbjct: 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Query: 133 FVGPIPSDIDRISGLQC----IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
+D+ + + +DL N + I + L L L N + K
Sbjct: 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKT 219
Query: 189 -IGDLSNLEVLGLAYNSNF-KPAMIPIEFGMLKKLKTLWMTEANL------IGEIPEAMS 240
I L+ LEV L + + + L+ L L + E L + +I + +
Sbjct: 220 CIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFN 279
Query: 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMN 300
L+++ +L +E L L + +++LK L+
Sbjct: 280 CLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKSLK----RLTFT 333
Query: 301 NLTGSIPEEFGKLKNLQLLGLFSNHLS--GEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
+ G L +L+ L L N LS G S +LK + N + + +
Sbjct: 334 SNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFL 393
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLY 418
GL LE + + ++ + R L + +
Sbjct: 394 GLEQ-LEHLDFQHSNLKQMSEFSV-----------------------FLSLRNLIYLDIS 429
Query: 419 SNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRG 475
+L L ++ N+ L L +S +
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 476 VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNNLN 534
S +L V S+N F L+ L L N + ++ + +SL LN
Sbjct: 490 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 549
Query: 535 LARNELSGEIPKA--IGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLS 583
L +N+ + + + L + + P + + + + N++
Sbjct: 550 LTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNIT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-26
Identities = 45/253 (17%), Positives = 82/253 (32%), Gaps = 12/253 (4%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
E N +P +L + + + L N ++ L L LS I +
Sbjct: 16 ELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGA 71
Query: 455 AWNLTRLEI---SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
+L+ L + N +L A + + L L L +
Sbjct: 72 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 512 DGNKL-SGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSL----LVMVSLDLSGNQFSG 566
N + S KLP + T+L +L+L+ N++ + L L+ +SLDLS N +
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191
Query: 567 EIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRF 626
P +++L+ L +N N+ +N S
Sbjct: 192 IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 251
Query: 627 RNSDKISSKHLAL 639
++ + L
Sbjct: 252 EGLCNLTIEEFRL 264
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 6e-14
Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 3/131 (2%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
P+I ++T + L + Q P L +L +++S N+ LQ
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 522
Query: 126 LDLSQNYFVGPIPSDIDRI-SGLQCIDLGGNNFSGDIPRS--IGRLSELQTLYLYMNEFN 182
LD S N+ + ++ S L ++L N+F+ + + + + L + +
Sbjct: 523 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 582
Query: 183 GTFPKEIGDLS 193
P + +
Sbjct: 583 CATPSDKQGMP 593
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 1e-73
Identities = 72/308 (23%), Positives = 112/308 (36%), Gaps = 44/308 (14%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
L + G G V++ + E+VAVK + K + E+ L ++H N
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLN--EYVAVKIF----PIQDKQSWQNEYEVYSLPGMKHEN 79
Query: 753 IVKLW-CCISSENSK---LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
I++ + L+ + E SL +L +V+ W
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA--------------NVVSWNELCH 125
Query: 809 IAIGAAQGLCYMHHD-------CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
IA A+GL Y+H D P I HRD+KS N+LL + A IADFGLA
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 862 EPHTMSAVAGSFGYFAPEYA-----YTTKVNEKIDIYSFGVVLLELVTGKEANYG---DE 913
G+ Y APE + +ID+Y+ G+VL EL + A G +
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245
Query: 914 HTSLAEWAWRHYAEEKPITDALDKG----IAEPCYLEE-MTTVYRLALICTSTLPSSRPS 968
E +H + E + K + + M + C +R S
Sbjct: 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305
Query: 969 MKEVLQIL 976
V + +
Sbjct: 306 AGCVGERI 313
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 259 bits (663), Expect = 4e-73
Identities = 91/654 (13%), Positives = 203/654 (31%), Gaps = 87/654 (13%)
Query: 22 SIPFEVIPQSPNTEERTILLNLKQQLGNP------------PSLQSWTSTSSPCDWPEIT 69
++P ++ + ++ L + + L +W W +
Sbjct: 256 NVPIQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQP 315
Query: 70 CTF----NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
VTG+SL ++P I L L + ++S F
Sbjct: 316 GVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDM 375
Query: 126 LDLSQNYFVGPIPSD-IDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNG- 183
+ ++ +D L DL + + + + + + + L +
Sbjct: 376 SEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN--PEMKPIKKDSRISLKDTQIGNL 433
Query: 184 -----TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA 238
K I L+ L+++ A + I A +
Sbjct: 434 TNRITFISKAIQRLTKLQIIYFANS---PFTYDNIAVDWEDANSDY----AKQYENEELS 486
Query: 239 MSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLS 298
SNL L + L +P L+ L L L + N +
Sbjct: 487 WSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN-------------RGISAAQL 533
Query: 299 MNNLTGSIPEEFGKLKNLQLLGLFSNHLSG-EVPASIGKIPALKKFKVFNNSLSGVLPPE 357
+ T + ++ +Q+ + N+L AS+ K+ L +N + +
Sbjct: 534 KADWT-RLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHL--EA 590
Query: 358 IGLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGVVAFENNLSGAVPK--SLGNCRTLRT 414
G + L ++ NQ +PE+ CA ++G+ N L +P + + + +
Sbjct: 591 FGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGS 648
Query: 415 VQLYSNRFSGELPT-----GLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI---SNN 466
V N+ E + N S++ LS N I P++ + + SNN
Sbjct: 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNN 707
Query: 467 RFS-------GQIQRGVGSWKNLIVFKASNNLFSGEIPVEL--TSLSHLNTLLLDGNKLS 517
+ + L N + + + T+L +L+ + + N S
Sbjct: 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS 766
Query: 518 GKLPSQIVSWTSL------NNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPE 571
P+Q ++ + L + + N + + P I + ++ L + N ++ +
Sbjct: 767 S-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEK 824
Query: 572 IGQLKLNTFNLSSNKL----YGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPK 621
+ +L +++ N ++ Y + ++ + + +
Sbjct: 825 LTP-QLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIR-GCDALGIER 876
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 3e-38
Identities = 66/501 (13%), Positives = 148/501 (29%), Gaps = 47/501 (9%)
Query: 116 FLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLY 175
F T+L+ + ++ + + I + + + +P ++ T
Sbjct: 166 FNRVTTELKGMKVTYKEDSKEHQNPDNANDKYMDIGVATCDSAVWLPAGTYQVVAYTT-- 223
Query: 176 LYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEI 235
Y E + E + N K A +PI+ I
Sbjct: 224 -YSQSGIKRSELETQSVRG-ESFTVIDNKLTKDANVPIQLKETA-------------EYI 268
Query: 236 PEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDI 295
+ + + E L + N D ++T +
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGL 328
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLP 355
L+ G +P+ G+L L++L ++ + + + + +
Sbjct: 329 SLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYK 388
Query: 356 PEIGLH-SALEGFEVSTNQFS-----GPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
+ L ++ + + P+ ++ + N ++ + K++
Sbjct: 389 KMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRL 447
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS--GELPSKTAWNLTRLEISNNR 467
L+ + ++ F+ + W N +N L +LT +E+ N
Sbjct: 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK-----DLTDVELYNCP 502
Query: 468 FSGQIQRGVGSWKNLIVFKASNNLFSG---------EIPVELTSLSHLNTLLLDGNKLSG 518
Q+ + L + N + + + + + N L
Sbjct: 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE 562
Query: 519 -KLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-- 575
+ + L L+ N++ + A G+ + + L L NQ EIP +
Sbjct: 563 FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTD 619
Query: 576 KLNTFNLSSNKLYGNIPDEFN 596
++ S NKL IP+ FN
Sbjct: 620 QVEGLGFSHNKLKY-IPNIFN 639
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 3e-08
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 2/122 (1%)
Query: 511 LDGNKLSGKLPSQIVSWTSLN-NLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 569
LDG + + SLN N N + + + + + L L+G G +P
Sbjct: 281 LDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340
Query: 570 PEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRN 628
IGQL L + ++ + + D + + R
Sbjct: 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNL 400
Query: 629 SD 630
SD
Sbjct: 401 SD 402
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 3e-63
Identities = 106/544 (19%), Positives = 174/544 (31%), Gaps = 46/544 (8%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
NS + + L NLT +DL+ I + + +L L L+ N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
+ + + L+ + S + L++LYL N + +
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151
Query: 192 LSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWM-TEANLIGEIPEAMSNLSSLEIL 248
L+VL N + L++ L + N I I + + + L
Sbjct: 152 TEKLKVLDFQNNAIHYLSKE----DMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSL 207
Query: 249 ALNGNHLEGAIPSGLFL--LNNLTQLFLYDNILSGEIPSSVEALK---LTDIDLSMNNLT 303
G I GL + +L D P+ E L + I+L +
Sbjct: 208 NFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267
Query: 304 GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSA 363
F LQ L L + HLS E+P+ + + LKK + N + +
Sbjct: 268 NISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPS 326
Query: 364 LEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNR-- 421
L + N L L N LR + L +
Sbjct: 327 LTHLSIKGNTKRLELGTG-----------------------CLENLENLRELDLSHDDIE 363
Query: 422 FSGELPTGLWTTFNLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGV-G 477
S L +L SL LS N L ++ L L+++ R + +
Sbjct: 364 TSDCCNLQLRNLSHLQSLNLSYNEPLS-LKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422
Query: 478 SWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG---KLPSQIVSWTSLNNLN 534
+ L V S++L L L L L GN + + + + L L
Sbjct: 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482
Query: 535 LARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDE 594
L+ +LS A SL +M +DLS N+ + + LK NL+SN + +P
Sbjct: 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSL 542
Query: 595 FNNL 598
L
Sbjct: 543 LPIL 546
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 7e-58
Identities = 91/504 (18%), Positives = 160/504 (31%), Gaps = 21/504 (4%)
Query: 79 SLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP 138
L I L T+ L++N + L L++L Q
Sbjct: 63 DLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDF 122
Query: 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVL 198
+ L+ + LG N+ S +L+ L N + +++ L L
Sbjct: 123 IPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182
Query: 199 GLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSN--LSSLEILALNGNHLE 256
L N N A I ++L + I + + N + SL + E
Sbjct: 183 SLNLNGND-IAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDE 241
Query: 257 GAIPSGLFL---LNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGK 312
I +F ++ + L + ++ L ++DL+ +L+ +P
Sbjct: 242 D-ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVG 299
Query: 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI--GLHSALEGFEVS 370
L L+ L L +N S P+L + N+ L L + L ++S
Sbjct: 300 LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN-LRELDLS 358
Query: 371 TNQ--FSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPT 428
+ S L LQ + N ++ C L + L R +
Sbjct: 359 HDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418
Query: 429 GLWTTF-NLSSLMLSDNTISGELPSKTAW--NLTRLEISNNRFSGQIQRGVGSWKN---L 482
+ L L LS + + L L + N F + S + L
Sbjct: 419 SPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478
Query: 483 IVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG 542
+ S S TSL +N + L N+L+ + +S LNLA N +S
Sbjct: 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHLKGIYLNLASNHISI 537
Query: 543 EIPKAIGSLLVMVSLDLSGNQFSG 566
+P + L +++L N
Sbjct: 538 ILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 2e-52
Identities = 87/466 (18%), Positives = 147/466 (31%), Gaps = 25/466 (5%)
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
+ + +IP ++ + + L N L NL L L +
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRC---QIY 70
Query: 210 MIPIE-FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN 268
I + F +L TL +T LI A+S +L+ L + L
Sbjct: 71 WIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKT 130
Query: 269 LTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQL--LGLFSNH 325
L L+L N +S KL +D N + E+ L+ L L N
Sbjct: 131 LESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190
Query: 326 LSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHS--ALEGFEVSTNQFSGPLPENLC 383
++ + + V+ + + +L P
Sbjct: 191 IA-GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249
Query: 384 AGGVLQGVV--AFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLML 441
+ ++ + L+ + L + S ELP+GL L L+L
Sbjct: 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVL 308
Query: 442 SDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRGV-GSWKNLIVFKASNN--LFSGE 495
S N L +A N L I N ++ G + +NL S++ S
Sbjct: 309 SANKFEN-LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDC 367
Query: 496 IPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPK-AIGSLLVM 554
++L +LSHL +L L N+ L L+LA L + + +L ++
Sbjct: 368 CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427
Query: 555 VSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLA 599
L+LS + L L NL N + N+L
Sbjct: 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQ 473
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 2e-10
Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Query: 83 KDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID 142
+ + L L + LS + + + ++DLS N +
Sbjct: 462 PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS 521
Query: 143 RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGT 184
+ G+ ++L N+ S +P + LS+ +T+ L N + T
Sbjct: 522 HLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-08
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 79 SLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP 138
L D++ LK + +DLS N + E L + + L+L+ N+ +P
Sbjct: 482 VLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILP 540
Query: 139 SDIDRISGLQCIDLGGNNFSGD 160
S + +S + I+L N
Sbjct: 541 SLLPILSQQRTINLRQNPLDCT 562
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 209 bits (533), Expect = 4e-61
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 52/305 (17%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRI----WNNRKLNQKLEKEFIAEIEIL 745
+ + IG GG G V++ + VA+K + + +EF E+ I+
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 746 GTIRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ H NIVKL+ N +V E++ L L + + W
Sbjct: 78 SNLNHPNIVKLYGLMH---NPPRMVMEFVPCGDLYHRLLDKAHPI------------KWS 122
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-----EFKAKIADFGLAKMLAK 859
+L++ + A G+ YM + P I+HRD++S NI L S AK+ADFGL++
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--- 178
Query: 860 QGEPHTMSAVAGSFGYFAPE--YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
H++S + G+F + APE A EK D YSF ++L ++TG+ + +
Sbjct: 179 --SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP-FDEYSYGK 235
Query: 918 AEWAWRHYAEEK--PITDALDKGIAEPCYLEEMTTVYRLALI--CTSTLPSSRPSMKEVL 973
++ E I + + +I C S P RP ++
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRLRN--------------VIELCWSGDPKKRPHFSYIV 281
Query: 974 QILRR 978
+ L
Sbjct: 282 KELSE 286
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 1e-60
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
+ ++G G G V + + VA+K+I ++ K FI E+ L +
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQI-----ESESERKAFIVELRQLSRVN 59
Query: 750 HANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H NIVKL+ C+ N LV EY E SL LHG + +
Sbjct: 60 HPNIVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEP----------LPYYTAAHAMS 106
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK-AKIADFGLAKMLAKQGEPHTMS 867
+ +QG+ Y+H +IHRD+K N+LL + KI DFG A + M+
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMT 161
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
GS + APE + +EK D++S+G++L E++T ++ + + W +
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP-FDEIGGPAFRIMWAVHNG 220
Query: 928 EKP-ITDALDKGIAEPCYLEEMTTVYRLALI--CTSTLPSSRPSMKEVLQILRR 978
+P + L K I L+ C S PS RPSM+E+++I+
Sbjct: 221 TRPPLIKNLPKPIES--------------LMTRCWSKDPSQRPSMEEIVKIMTH 260
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 3e-60
Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 665 RKRNRDPATWKLTSFHQLGFTESNI-LSSLTESNLIGSGGSGQVYRIDINGA--GEFVAV 721
P T L + + +I L IG+G G V+R G VAV
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHR----AEWHGSDVAV 65
Query: 722 KRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL--WCCISSENSKLLVYEYMENQSLD 779
K + + + + EF+ E+ I+ +RH NIV + + +V EY+ SL
Sbjct: 66 KIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV--TQPPNLSIVTEYLSRGSLY 122
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 839
R LH + L RL +A A+G+ Y+H+ P I+HR++KS N+L
Sbjct: 123 RLLHKSGA----------REQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLL 171
Query: 840 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
+D ++ K+ DFGL+++ K + + AG+ + APE NEK D+YSFGV+L
Sbjct: 172 VDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI-- 957
EL T ++ +G+ + + A + I L+ +A +I
Sbjct: 230 WELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA--------------IIEG 274
Query: 958 CTSTLPSSRPSMKEVLQILRR 978
C + P RPS ++ +LR
Sbjct: 275 CWTNEPWKRPSFATIMDLLRP 295
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 3e-58
Identities = 95/546 (17%), Positives = 167/546 (30%), Gaps = 51/546 (9%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+S I L + + L +DLS I + + L NL L+ N
Sbjct: 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIG 190
P ++ L+ + + IG+L L+ L + N + P
Sbjct: 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS 150
Query: 191 DLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEIL 248
+L+NL + L+YN + + +L M+ N I I + L L
Sbjct: 151 NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL-NPIDFIQDQAFQGIKLHEL 209
Query: 249 ALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV---------EALKLTDIDLS 298
L GN I L L L E + + + + L+
Sbjct: 210 TLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269
Query: 299 MNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
N +F L N+ + L + + K + + L P +
Sbjct: 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLKQF--PTL 325
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLY 418
L L+ ++ N+ S +L + L
Sbjct: 326 DLPF-LKSLTLTMNKGSISF--------------------------KKVALPSLSYLDLS 358
Query: 419 SNRFS--GELPTGLWTTFNLSSLMLSDNTISGELPS-KTAWNLTRLEISNNRFSGQIQRG 475
N S G T +L L LS N + L L+ ++ +
Sbjct: 359 RNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFS 418
Query: 476 V-GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNNL 533
S + L+ S + L+ LNTL + GN S + + T+L L
Sbjct: 419 AFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478
Query: 534 NLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIP 592
+L++ +L +L + L++S N QL L+T + S N++ +
Sbjct: 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKG 538
Query: 593 DEFNNL 598
+
Sbjct: 539 ILQHFP 544
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 3e-28
Identities = 56/394 (14%), Positives = 112/394 (28%), Gaps = 65/394 (16%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
+ ++P+ + SS + + L+ N L+ + L L L + +
Sbjct: 21 QKLSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHG 78
Query: 290 LK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNN 348
L L+++ L+ N + P F L +L+ L L+ IG++ LKK V +N
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 349 SLSGV-LPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLG 407
+ LP + L ++S N +L
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENP------------------ 180
Query: 408 NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNR 467
+ ++ + N + + L L L N S + NL L +
Sbjct: 181 --QVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRL- 236
Query: 468 FSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW 527
F E +E+ S + L
Sbjct: 237 --------------------ILGEFKDERNLEIFEPSIMEGL----------------CD 260
Query: 528 TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
+++ L + L + ++ L+G + K + ++ +L
Sbjct: 261 VTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLEDVPKHFKWQSLSIIRCQL 319
Query: 588 YGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPK 621
+ L L + + + LP
Sbjct: 320 KQFPTLDLPFLKSLT--LTMNKGSISFKKVALPS 351
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 3e-15
Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFP-EFLYNCTKLQNLDLSQNY 132
+ + + + + I L +L T+ ++ NS N T L LDLS+
Sbjct: 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQ 484
Query: 133 FVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDL 192
D + LQ +++ NN +L L TL N +
Sbjct: 485 LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFP 544
Query: 193 SNLEVLGLAYN 203
+L L N
Sbjct: 545 KSLAFFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 7e-11
Identities = 18/98 (18%), Positives = 31/98 (31%)
Query: 85 ITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRI 144
+ + + NLT +DLS + +LQ L++S N + S +++
Sbjct: 461 KDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQL 520
Query: 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182
L +D N L L N
Sbjct: 521 YSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-08
Identities = 14/81 (17%), Positives = 25/81 (30%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
+ L + Q + L L +++S N++ L LD S N
Sbjct: 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSK 537
Query: 138 PSDIDRISGLQCIDLGGNNFS 158
L +L N+ +
Sbjct: 538 GILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 11/60 (18%), Positives = 24/60 (40%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ + +++ H ++ L +L+T+D S N I + L +L+ N
Sbjct: 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNN 555
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 1e-57
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 40/295 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+T IGSG G VY+ +G VAVK + N + + F E+ +L RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
NI+ ++ +V ++ E SL LH + + IA
Sbjct: 80 VNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKF------------EMKKLIDIA 126
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A+G+ Y+H IIHRD+KS+NI L + KI DFGLA ++ H ++
Sbjct: 127 RQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 871 GSFGYFAPE---YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
GS + APE + + + D+Y+FG+VL EL+TG + + +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG-------------QLPYSNINN 230
Query: 928 EKPITDALDKGIAEPCYLEEMTT----VYRLALICTSTLPSSRPSMKEVLQILRR 978
I + + +G P + + + RL C RPS +L +
Sbjct: 231 RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 198 bits (506), Expect = 2e-57
Identities = 56/301 (18%), Positives = 105/301 (34%), Gaps = 45/301 (14%)
Query: 686 ESNI-LSSLTESNLIGSGGSGQVYRIDINGA--GEFVAVKRIWNNRKLNQKLEKEFIAEI 742
S I L + SG++++ G G + VK + R + + ++F E
Sbjct: 4 HSGIDFKQLNFLTKLNENHSGELWK----GRWQGNDIVVKVL-KVRDWSTRKSRDFNEEC 58
Query: 743 EILGTIRHANIVKLW-CCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800
L H N++ + C S L+ +M SL LH V
Sbjct: 59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-----------FV 107
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
+ ++ A+ A+G+ ++H P I + S ++++D + A+I+ +
Sbjct: 108 VDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF--- 163
Query: 861 GEPHTMSAVAGSFGYFAPE---YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+ + APE D++SF V+L ELVT + + D
Sbjct: 164 ----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP-FADLSNME 218
Query: 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
I + +++ L IC + P+ RP ++ IL
Sbjct: 219 IGMKVALEGLRPTIPPGISPHVSK------------LMKICMNEDPAKRPKFDMIVPILE 266
Query: 978 R 978
+
Sbjct: 267 K 267
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 2e-57
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 42/297 (14%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRI-WNNRKLNQKLEKEFIAEIEILGTI 748
+ LT +IG GG G+VYR G + VAVK + + + + E ++ +
Sbjct: 6 FAELTLEEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
+H NI+ L E + LV E+ L+R L G++ + +
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--------------IPPDILVN 109
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--------AKIADFGLAKMLAKQ 860
A+ A+G+ Y+H + IIHRD+KSSNIL+ + + KI DFGLA+ +
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR- 168
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920
T + AG++ + APE + ++ D++S+GV+L EL+TG+ + +
Sbjct: 169 ---TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP-FRGIDGLAVAY 224
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
PI + A+ L C + P SRPS +L L
Sbjct: 225 GVAMNKLALPIPSTCPEPFAK------------LMEDCWNPDPHSRPSFTNILDQLT 269
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-55
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 42/299 (14%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
S L ++G G GQ ++ GE + +K + + +++ ++ F+ E++++ + H
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEH 66
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N++K + + + EY++ +L + W R+ A
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY------------PWSQRVSFA 114
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML------------A 858
A G+ Y+H + IIHRD+ S N L+ +ADFGLA+++
Sbjct: 115 KDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 859 KQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918
K+ + V G+ + APE +EK+D++SFG+VL E++ A+
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD------- 224
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ R + LD+ C + + + + C P RPS ++ L
Sbjct: 225 -YLPRTMDFGLNVRGFLDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 195 bits (496), Expect = 2e-55
Identities = 69/334 (20%), Positives = 122/334 (36%), Gaps = 60/334 (17%)
Query: 681 QLGFTESNI-LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI 739
+ +E ++ L +L LIG G G VY+ ++ VAVK + + FI
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDE--RPVAVK------VFSFANRQNFI 53
Query: 740 AEIEI--LGTIRHANIVKL-----WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSG 792
E I + + H NI + LLV EY N SL ++L
Sbjct: 54 NEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS--------- 104
Query: 793 SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD------CTPQIIHRDVKSSNILLDSEFKA 846
H W + ++A +GL Y+H + P I HRD+ S N+L+ ++
Sbjct: 105 -----LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
Query: 847 KIADFGLAKMLA------KQGEPHTMSAVAGSFGYFAPEYAYTT-------KVNEKIDIY 893
I+DFGL+ L E + + G+ Y APE +++D+Y
Sbjct: 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY 219
Query: 894 SFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAE--------PCYL 945
+ G++ E+ + E + A++ P + + ++ +
Sbjct: 220 ALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279
Query: 946 EEMTTVYRLALI---CTSTLPSSRPSMKEVLQIL 976
E V L C +R + + + +
Sbjct: 280 ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 186 bits (473), Expect = 1e-52
Identities = 76/313 (24%), Positives = 122/313 (38%), Gaps = 50/313 (15%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI--RH 750
+T +G G G+V+R G E VAVK + + EK + E E+ T+ RH
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQG--ENVAVK------IFSSRDEKSWFRETELYNTVMLRH 61
Query: 751 ANIVKLW-CCISSENSK---LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
NI+ ++S +S L+ Y E SL +L L +
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--------------LTTLDTVSC 107
Query: 807 LQIAIGAAQGLCYMHHD-----CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
L+I + A GL ++H + P I HRD+KS NIL+ + IAD GLA M ++
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 862 EPH--TMSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
+ G+ Y APE +++DI++FG+VL E+ +N E
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227
Query: 914 HTSLA--EWAWRHYAEEKPITDALDKG----IAEPCYLEEMTTVYRLALI--CTSTLPSS 965
+ + E I + + T L+ C PS+
Sbjct: 228 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA-KLMKECWYQNPSA 286
Query: 966 RPSMKEVLQILRR 978
R + + + L +
Sbjct: 287 RLTALRIKKTLTK 299
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 1e-52
Identities = 76/317 (23%), Positives = 110/317 (34%), Gaps = 50/317 (15%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT- 747
I + IG G G+V+ G E VAVK E + E EI T
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGKWRG--EKVAVK------VFFTTEEASWFRETEIYQTV 86
Query: 748 -IRHANIVKLW-CCISSENSK---LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+RH NI+ I S L+ +Y EN SL +L L
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK--------------STTLD 132
Query: 803 WPTRLQIAIGAAQGLCYMH-----HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
+ L++A + GLC++H P I HRD+KS NIL+ IAD GLA
Sbjct: 133 AKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
Query: 858 AKQGEPHT--MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGKEAN 909
+ G+ Y PE + D+YSFG++L E+ +
Sbjct: 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
Query: 910 YGDEHTSLA--EWAWRHYAEEKPITDALDKG----IAEPCYLEEMTTVYRLALI--CTST 961
E L + + E K +E L+ C +
Sbjct: 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG-KLMTECWAH 311
Query: 962 LPSSRPSMKEVLQILRR 978
P+SR + V + L +
Sbjct: 312 NPASRLTALRVKKTLAK 328
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 2e-52
Identities = 61/302 (20%), Positives = 108/302 (35%), Gaps = 47/302 (15%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
L LIG G GQVY +G VA++ I + + N+ K F E+ R
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLI-DIERDNEDQLKAFKREVMAYRQTR 87
Query: 750 HANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H N+V C+S + ++ + ++L + K L Q
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVL------------DVNKTRQ 134
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK---QGEPHT 865
IA +G+ Y+H I+H+D+KS N+ D K I DFGL +
Sbjct: 135 IAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190
Query: 866 MSAVAGSFGYFAPE---------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 916
+ G + APE ++ D+++ G + EL + + +
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP-FKTQPAE 249
Query: 917 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
W + + K I++ + L C + RP+ +++ +L
Sbjct: 250 AIIWQMGTGMKPNLSQIGMGKEISD------------ILLFCWAFEQEERPTFTKLMDML 297
Query: 977 RR 978
+
Sbjct: 298 EK 299
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 4e-51
Identities = 69/317 (21%), Positives = 118/317 (37%), Gaps = 50/317 (15%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI--LG 746
I ++ IG G G+V+R G E VAVK + + E+ + E EI
Sbjct: 40 IARTIVLQESIGKGRFGEVWRGKWRG--EEVAVK------IFSSREERSWFREAEIYQTV 91
Query: 747 TIRHANIVKLW-CCISSENSK---LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+RH NI+ + LV +Y E+ SL +L+ ++ +
Sbjct: 92 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--------------RYTVT 137
Query: 803 WPTRLQIAIGAAQGLCYMHHD-----CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
+++A+ A GL ++H + P I HRD+KS NIL+ IAD GLA
Sbjct: 138 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 858 AKQGEPHT--MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGKEAN 909
+ + G+ Y APE + ++ DIY+ G+V E+
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
Query: 910 YGDEHTSLA--EWAWRHYAEEKPITDALDKG----IAEPCYLEEMTTVYRLALI--CTST 961
E L + + E+ ++ I E V ++ C
Sbjct: 258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA-KIMRECWYA 316
Query: 962 LPSSRPSMKEVLQILRR 978
++R + + + L +
Sbjct: 317 NGAARLTALRIKKTLSQ 333
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 3e-49
Identities = 98/497 (19%), Positives = 177/497 (35%), Gaps = 61/497 (12%)
Query: 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYF 133
L ++T + DL +TT+ I + + L ++ S N
Sbjct: 25 EKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQL 80
Query: 134 VGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS 193
P + ++ L I + N + P + L+ L L L+ N+ P + +L+
Sbjct: 81 TDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLT 134
Query: 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGN 253
NL L L+ N+ L L+ L N + ++ + ++NL++LE L ++ N
Sbjct: 135 NLNRLELSSNT----ISDISALSGLTSLQQLSF--GNQVTDL-KPLANLTTLERLDISSN 187
Query: 254 HLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGK 312
+ S L L NL L +N +S P + L L ++ L+ N L
Sbjct: 188 KVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLAS 241
Query: 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTN 372
L NL L L +N +S P + + L + K+ N +S + + +AL E++ N
Sbjct: 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNEN 297
Query: 373 QFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWT 432
Q P + N + L + LY N S P T
Sbjct: 298 QLEDISP--------------------------ISNLKNLTYLTLYFNNISDISPVSSLT 331
Query: 433 TFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLF 492
L L +N +S N+ L +N+ S + + + ++ +
Sbjct: 332 --KLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT--PLANLTRITQLGLNDQAW 387
Query: 493 SGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL 552
+ ++S NT+ L P+ I S ++ N S + +
Sbjct: 388 TNAPVNYKANVSIPNTVKNVTGALI--APATISDGGSYTEPDITWNLPS-YTNEVSYTFS 444
Query: 553 VMVSLDLSGNQFSGEIP 569
V++ FSG +
Sbjct: 445 QPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 1e-42
Identities = 87/520 (16%), Positives = 165/520 (31%), Gaps = 85/520 (16%)
Query: 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSG 159
+ I F + L + + + + +
Sbjct: 5 SATITQDTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK- 59
Query: 160 DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLK 219
+ L+ L + N+ + +L+ L + + N L
Sbjct: 60 -SIDGVEYLNNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNNQIADI----TPLANLT 112
Query: 220 KLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNIL 279
L L + N I +I + NL++L L L+ N + S L L +L QL + +
Sbjct: 113 NLTGLTLFN-NQITDID-PLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVT 168
Query: 280 SGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIP 338
+ L L +D+S N ++ KL NL+ L +N +S P +G +
Sbjct: 169 D---LKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILT 221
Query: 339 ALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNL 398
L + + N L + + + L +++ NQ S P
Sbjct: 222 NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP------------------- 260
Query: 399 SGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNL 458
L L ++L +N+ S P T L++L L++N + P NL
Sbjct: 261 -------LSGLTKLTELKLGANQISNISPLAGLT--ALTNLELNENQLEDISPISNLKNL 311
Query: 459 TRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG 518
T L + N S ++SL+ L L NK+S
Sbjct: 312 TYLTLYFNNISDIS--------------------------PVSSLTKLQRLFFYNNKVSD 345
Query: 519 KLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLN 578
S + + T++N L+ N++S P + +L + L L+ ++ + +
Sbjct: 346 --VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIP 401
Query: 579 TFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIIN 618
+ P ++ NL ++
Sbjct: 402 NTVKNVTGAL-IAPATISDGGSYTEPDITWNLPSYTNEVS 440
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 7e-47
Identities = 96/523 (18%), Positives = 166/523 (31%), Gaps = 74/523 (14%)
Query: 89 IPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQ 148
I P L S+++ E P N + + + P +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
L + L L + + P+ +LE L + NS
Sbjct: 62 VSRLRDC-----------LDRQAHELELNNLGLS-SLPELPP---HLESLVASCNSL--- 103
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN 268
+P LK L + ++P LE L ++ N LE +P L +
Sbjct: 104 TELPELPQSLKSLLVDNN-NLKALSDLP------PLLEYLGVSNNQLE-KLPE-LQNSSF 154
Query: 269 LTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
L + + +N L ++P L I N L +P E L L + +N L
Sbjct: 155 LKIIDVDNNSLK-KLPDLPP--SLEFIAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLK- 208
Query: 329 EVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
++P L+ NN L PE+ L N LP+ + L
Sbjct: 209 KLPDLPLS---LESIVAGNNILE--ELPELQNLPFLTTIYADNNLLKT-LPDLPPS---L 259
Query: 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISG 448
+ + +N L+ +P+ + L + + S P NL L S N I
Sbjct: 260 EALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP-------NLYYLNASSNEIR- 310
Query: 449 ELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNT 508
L +L L +SNN+ ++ L AS N + E+P +L L+
Sbjct: 311 SLCDLPP-SLEELNVSNNKLI-ELPALPP---RLERLIASFNHLA-EVPELPQNLKQLH- 363
Query: 509 LLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEI 568
++ N L + P S L + E+P+ +L L + N E
Sbjct: 364 --VEYNPLR-EFPDIPESVEDLRMNS-----HLAEVPELPQNL---KQLHVETNPLR-EF 411
Query: 569 PPEIGQLKLNTFNLSSNKLYGNIPDEFNNL-AYDDSFLNNSNL 610
P ++ ++S ++ +D + +
Sbjct: 412 PDIPESVE--DLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 3e-46
Identities = 104/482 (21%), Positives = 170/482 (35%), Gaps = 74/482 (15%)
Query: 147 LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNF 206
LQ +N + ++P + Y +E+ P G+ + V L
Sbjct: 13 LQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDC--- 68
Query: 207 KPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLL 266
+ ++ L + + +PE LE L + N L +P L
Sbjct: 69 ----------LDRQAHELELNN-LGLSSLPE---LPPHLESLVASCNSLT-ELPELPQSL 113
Query: 267 NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
+L LS P L + +S N L +P E L+++ + +N L
Sbjct: 114 KSLLVDNNNLKALSDLPPL------LEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSL 165
Query: 327 SGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGG 386
++P L+ NN L + PE+ L N LP+ +
Sbjct: 166 K-KLPDLPPS---LEFIAAGNNQLEEL--PELQNLPFLTAIYADNNSLKK-LPDLPLS-- 216
Query: 387 VLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 446
L+ +VA N L L N L T+ +N LP +L +L + DN +
Sbjct: 217 -LESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLP---PSLEALNVRDNYL 269
Query: 447 SGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHL 506
+ +LP +LT L++S N FS + NL AS+N + SL L
Sbjct: 270 T-DLPELPQ-SLTFLDVSENIFS-GLSELPP---NLYYLNASSNEIR-SLCDLPPSLEEL 322
Query: 507 NTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 566
N + NKL +LP+ L L + N L+ E+P+ +L L + N
Sbjct: 323 N---VSNNKLI-ELPALP---PRLERLIASFNHLA-EVPELPQNL---KQLHVEYNPLR- 370
Query: 567 EIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRF 626
E P ++ +L N +P+ NL L+ NP+ P P
Sbjct: 371 EFPDIPESVE----DLRMNSHLAEVPELPQNLKQ----LHVET----NPLREFPDIPESV 418
Query: 627 RN 628
+
Sbjct: 419 ED 420
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 1e-38
Identities = 82/448 (18%), Positives = 155/448 (34%), Gaps = 62/448 (13%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
C + L + ++ +P + +L ++ S NS+ E PE + L + +
Sbjct: 68 CLDRQAHELELNNLGLSS-LPELP---PHLESLVASCNSL-TELPELPQSLKSLLVDNNN 122
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
P L+ + + N +P + S L+ + + N P
Sbjct: 123 LKALSDLPPL-------LEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDLP 172
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILA 249
+LE + N + +P E L L ++ N + ++P+ SLE +
Sbjct: 173 P---SLEFIAAGNNQLEE---LP-ELQNLPFLTAIYADN-NSLKKLPD---LPLSLESIV 221
Query: 250 LNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEE 309
N LE L L LT ++ +N+L +P L +++ N LT +PE
Sbjct: 222 AGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPP--SLEALNVRDNYLT-DLPEL 275
Query: 310 FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEV 369
L L + + LS P L +N + L +LE V
Sbjct: 276 PQSLTFLDVSENIFSGLSEL-------PPNLYYLNASSNEIR-SLCDLP---PSLEELNV 324
Query: 370 STNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTG 429
S N+ LP L+ ++A N+L+ VP+ N + L + N E P
Sbjct: 325 SNNKLIE-LPALPPR---LERLIASFNHLA-EVPELPQNLKQLH---VEYNPLR-EFPDI 375
Query: 430 LWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASN 489
++ L ++ + +P NL +L + N + S ++L + ++
Sbjct: 376 P---ESVEDLRMNSHLAE--VPE-LPQNLKQLHVETNPLR-EFPDIPESVEDL---RMNS 425
Query: 490 NLFSGEIPVELTSLSHLNTLLLDGNKLS 517
+ L + + +
Sbjct: 426 ERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 5e-44
Identities = 107/537 (19%), Positives = 185/537 (34%), Gaps = 37/537 (6%)
Query: 80 LRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPS 139
+ + IP + + +DLS N + ++ +LQ LDLS+
Sbjct: 14 CMELNFYK-IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 70
Query: 140 DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLG 199
+S L + L GN + LS LQ L IG L L+ L
Sbjct: 71 AYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130
Query: 200 LAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEI----LALNGNHL 255
+A+N + +P F L L+ L ++ + + L + + L L+ N +
Sbjct: 131 VAHN-LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189
Query: 256 EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV----EALKLTDIDL----SMNNLTGSIP 307
I G F L +L L +N S + + L++ + L + NL
Sbjct: 190 NF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 248
Query: 308 EEFGKLKNLQLLGLFSNHLSG---EVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSAL 364
L NL + +L ++ + + F + + ++ V + +
Sbjct: 249 SALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGW 306
Query: 365 EGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNR--F 422
+ E+ +F L L+ + N A S + +L + L N F
Sbjct: 307 QHLELVNCKFGQFPTLKL---KSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSF 361
Query: 423 SGELPTGLWTTFNLSSLMLSDNTISGELPS--KTAWNLTRLEISNNRFSGQIQRGV-GSW 479
G + T +L L LS N + + S L L+ ++ + V S
Sbjct: 362 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 420
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI-VSWTSLNNLNLARN 538
+NLI S+ LS L L + GN I +L L+L++
Sbjct: 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480
Query: 539 ELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTFNLSSNKLYGNIPD 593
+L P A SL + L+++ NQ +P I L L +N + P
Sbjct: 481 QLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 6e-43
Identities = 56/308 (18%), Positives = 105/308 (34%), Gaps = 25/308 (8%)
Query: 87 QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRIS- 145
+ ++ + D + N Q + ++ +
Sbjct: 26 RPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGRALKA-TADLLEDATQ 80
Query: 146 -GLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204
G ++L P RLS LQ + + P + + LE L LA N
Sbjct: 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARN- 137
Query: 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSN---------LSSLEILALNGNHL 255
+P L +L+ L + + E+PE +++ L +L+ L L +
Sbjct: 138 --PLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGI 195
Query: 256 EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLK 314
++P+ + L NL L + ++ LS + ++ L L ++DL + P FG
Sbjct: 196 R-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253
Query: 315 NLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQF 374
L+ L L +P I ++ L+K + LP I A V +
Sbjct: 254 PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL- 312
Query: 375 SGPLPENL 382
L ++
Sbjct: 313 QAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 9e-36
Identities = 54/348 (15%), Positives = 113/348 (32%), Gaps = 52/348 (14%)
Query: 114 PEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQT 173
++ + +NL + + P + + D + S R +
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADR-------NRWHSAWRQANSNN 57
Query: 174 LYLYMNEFNG--TFPKEIGDLS--NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEA 229
+ + D + L L P + L L+ + + +A
Sbjct: 58 PQIETRTGRALKATADLLEDATQPGRVALELRSV---PLPQFPDQAFRLSHLQHMTI-DA 113
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
+ E+P+ M + LE L L N L A+P+ + LN L +L + E+P + +
Sbjct: 114 AGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172
Query: 290 LK----------LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPA 339
L + L + S+P L+NL+ L + ++ LS + +I +P
Sbjct: 173 TDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPK 230
Query: 340 LKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLS 399
L++ + + PP G + L+ + +NL
Sbjct: 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDC-----------------------SNLL 267
Query: 400 GAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
+P + L + L LP+ + +++ + +
Sbjct: 268 -TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-35
Identities = 62/384 (16%), Positives = 102/384 (26%), Gaps = 74/384 (19%)
Query: 214 EFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLF 273
+ L+ + + + +S N H + NN
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQAN----SNNPQIET 62
Query: 274 LYDNILSGEIPSSVEAL---KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEV 330
L +E ++L L P++ +L +LQ + + + L E+
Sbjct: 63 RTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 331 PASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQG 390
P ++ + L+ + N L LP I + L +
Sbjct: 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR-------------------- 158
Query: 391 VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGEL 450
+P+ L + + NL SL L I L
Sbjct: 159 ----ACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SL 198
Query: 451 PSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLL 510
P+ + + +NL K N+ S + + L L L
Sbjct: 199 PA----------------------SIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235
Query: 511 LDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP 570
L G P L L L +P I L + LDL G +P
Sbjct: 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295
Query: 571 EIGQLKLNTFNLSSNKLYGNIPDE 594
I QL N L L +
Sbjct: 296 LIAQLPANCIILVPPHLQAQLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-31
Identities = 58/391 (14%), Positives = 101/391 (25%), Gaps = 90/391 (23%)
Query: 241 NLSSLEILALNG-NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+ S E L G L L + + + D + +
Sbjct: 10 HSSGRENLYFQGSTALR-PYHDVL---SQWQRHYNADRNRWHSAWRQANSNNPQIETRTG 65
Query: 300 NNLTGSIPEEFGKLK--NLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPE 357
L + + L L S L + P ++ L+ + L LP
Sbjct: 66 RALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDT 122
Query: 358 IGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417
+ + LE ++ N A+P S+ + LR + +
Sbjct: 123 MQQFAGLETLTLARNPLR-------------------------ALPASIASLNRLRELSI 157
Query: 418 YSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVG 477
+ ELP L +T L NL L +
Sbjct: 158 RACPELTELPEPLASTDASGEH--------QGLV-----NLQSLRLEWTGIR-------- 196
Query: 478 SWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLAR 537
+P + +L +L +L + + LS L I L L+L
Sbjct: 197 -----------------SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRG 238
Query: 538 NELSGEIPKAIGSLLVMVSLDLSG-NQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEF 595
P G + L L + +P +I +L L +L +P
Sbjct: 239 CTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLI 297
Query: 596 NNLAYDDSFLNNSNLCV----KNPIINLPKC 622
L C+ + L +
Sbjct: 298 AQL---------PANCIILVPPHLQAQLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 3e-17
Identities = 29/229 (12%), Positives = 56/229 (24%), Gaps = 37/229 (16%)
Query: 400 GAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLT 459
G+ + + + L +D + N
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLS---QWQRHYNADRNRWHSAWRQANSNNP 58
Query: 460 RLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN--TLLLDGNKLS 517
++E L L + L L L
Sbjct: 59 QIETRTG----------------------RAL--KATADLLEDATQPGRVALELRSVPLP 94
Query: 518 GKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK- 576
+ P Q + L ++ + L E+P + + +L L+ N +P I L
Sbjct: 95 -QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNR 151
Query: 577 LNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV----KNPIINLPK 621
L ++ + +P+ + NL I +LP
Sbjct: 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPA 200
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 9e-42
Identities = 87/515 (16%), Positives = 172/515 (33%), Gaps = 40/515 (7%)
Query: 99 LTTIDLSSN---SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155
D S SIP +++LDLS N D+ + LQ + L +
Sbjct: 7 SGVCDGRSRSFTSIPSGLT------AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSS 60
Query: 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEF 215
+ + L L+ L L N + G LS+L+ L L N ++ + F
Sbjct: 61 RINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN-PYQTLGVTSLF 119
Query: 216 GMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLF 273
L L+TL + EI + L+SL L + L S + ++ L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-YQSQSLKSIRDIHHLT 178
Query: 274 LYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332
L+ + + + + L + ++L NL + + + S
Sbjct: 179 LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238
Query: 333 SIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVV 392
S ++ L ++ + + + + + + ++ ++ +
Sbjct: 239 SFNELLKLLRYILELSEVE------FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLH 292
Query: 393 AFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELP 451
+ L + ++ + + +++ +P +L L LS+N + E
Sbjct: 293 IPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYL 351
Query: 452 SKTAW-----NLTRLEISNNRFSGQIQRGVG---SWKNLIVFKASNNLFSGEIPVELTSL 503
+A +L L +S N +Q+ + KNL S N F +P
Sbjct: 352 KNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWP 409
Query: 504 SHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQ 563
+ L L + + + I +L L+++ N L + L L +S N+
Sbjct: 410 EKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD-SFSLFLPRL---QELYISRNK 462
Query: 564 FSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNL 598
+P L +S N+L F+ L
Sbjct: 463 LK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRL 496
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-23
Identities = 66/392 (16%), Positives = 137/392 (34%), Gaps = 37/392 (9%)
Query: 78 ISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGP 136
+ + + + +I L +L +++ + S+ + L + + +L L +
Sbjct: 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFL 187
Query: 137 IPSDIDRISGLQCIDLGGNN--------FSGDIPRSIGRLSELQTLYLYMNEFNG--TFP 186
+ D +S ++ ++L N D S + + L FN
Sbjct: 188 LEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLL 247
Query: 187 KEIGDLSNLEVLGLAYNS------NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS 240
+ I +LS +E N + + + ++ L + + L ++ S
Sbjct: 248 RYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYS 307
Query: 241 NLSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEAL----KLTDI 295
L ++ + + + + +P L +L L L +N++ E + L +
Sbjct: 308 LLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366
Query: 296 DLSMNNLT--GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGV 353
LS N+L E LKNL L + N +P S ++ + + + V
Sbjct: 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-V 424
Query: 354 LPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLR 413
+ I LE +VS N L LQ + N L +P + L
Sbjct: 425 VKTCIPQT--LEVLDVSNNNLDS-FSLFLPR---LQELYISRNKLK-TLPDA-SLFPVLL 476
Query: 414 TVQLYSNRFSGELPTGLWTTF-NLSSLMLSDN 444
+++ N+ +P G++ +L + L N
Sbjct: 477 VMKISRNQLK-SVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 56/320 (17%), Positives = 107/320 (33%), Gaps = 46/320 (14%)
Query: 14 TLILLVLLSIPFEVIPQSPN----TEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEIT 69
VL F + + E LG+ +S +
Sbjct: 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKV----- 283
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
++ + + + + + L+ + I + ++ + F + L+ LDLS
Sbjct: 284 -ETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLS 342
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
+N + + G LQTL L N + K
Sbjct: 343 EN-----------LMVEEYLKN----------SACKGAWPSLQTLVLSQNHLR-SMQKTG 380
Query: 190 G---DLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
L NL L ++ N F P +P +K++ L ++ I + +LE
Sbjct: 381 EILLTLKNLTSLDISRN-TFHP--MPDSCQWPEKMRFLNLSS-TGIRVVKT--CIPQTLE 434
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI 306
+L ++ N+L+ + L L +L++ N L +P + L + +S N L
Sbjct: 435 VLDVSNNNLD-SFSLF---LPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVP 489
Query: 307 PEEFGKLKNLQLLGLFSNHL 326
F +L +LQ + L +N
Sbjct: 490 DGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-22
Identities = 56/397 (14%), Positives = 124/397 (31%), Gaps = 23/397 (5%)
Query: 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSM 299
+ + + +IPSGL + L L N ++ + A L + L
Sbjct: 3 SCDASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGV-LPPEI 358
+ + + F L +L+ L L NHLS + G + +LK + N + +
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417
+ L+ + + + AG L + +L +SL + R + + L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 418 YSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVG 477
+ + + L ++ L L D ++ L E+S+ + V
Sbjct: 180 HLSESAFLLEIFADILSSVRYLELRDTNLARF----QFSPLPVDEVSSPMKKLAFRGSVL 235
Query: 478 SWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLAR 537
+ ++ VE + + ++ V ++ L++ +
Sbjct: 236 TDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQ 295
Query: 538 NELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL--KLNTFNLSSNKLYGNIPDEF 595
L ++ L + + + ++ +P Q L +LS N +
Sbjct: 296 FYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354
Query: 596 NNLAYDDSFLNNSNLCV----KNPIINLPKCPSRFRN 628
+L +N + ++ K
Sbjct: 355 A------CKGAWPSLQTLVLSQNHLRSMQKTGEILLT 385
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 8e-14
Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 29/225 (12%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSN---SIPGEFPEFLYNCT 121
+ V I++ + + +P LK+L +DLS N +
Sbjct: 303 STVYSLLEKVKRITVENSKV-FLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361
Query: 122 KLQNLDLSQNYF--VGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
LQ L LSQN+ + + + L +D+ N F +P S +++ L L
Sbjct: 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSST 420
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNS-NFKPAMIP---------------IEFGMLKKLKT 223
I LEVL ++ N+ + +P + + L
Sbjct: 421 GIR-VVKTCI--PQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLV 477
Query: 224 LWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFLLN 267
+ + N + +P+ L+SL+ + L+ N + + P +L
Sbjct: 478 MKI-SRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSR 521
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 4e-41
Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 47/287 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL- 756
IG G VY+ VA + +RKL + + F E E+L ++H NIV+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCEL-QDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91
Query: 757 --WCCISSENSKLLVY-EYMENQSLDRWL--HGR-KRSLVSGSSSVHQHVLHWPTRLQIA 810
W +++ E M + +L +L K ++ W R QI
Sbjct: 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLR----------SW-CR-QIL 139
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIADFGLAKMLAKQGEPHTMSAV 869
+GL ++H TP IIHRD+K NI + KI D GLA + AV
Sbjct: 140 ----KGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----SFAKAV 190
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
G+ + APE Y K +E +D+Y+FG+ +LE+ T E Y + + +
Sbjct: 191 IGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIY---RRVTSG 245
Query: 930 PITDALDKGIAEPC--YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ DK +E C R S+K++L
Sbjct: 246 VKPASFDKVAIPEVKEIIEG----------CIRQNKDERYSIKDLLN 282
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 4e-41
Identities = 99/617 (16%), Positives = 204/617 (33%), Gaps = 56/617 (9%)
Query: 78 ISLRHKDITQKIPPIIC-DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGP 136
+ L + I +L NL +DL S+ I P+ L L L
Sbjct: 53 LELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112
Query: 137 I--PSDIDRISGLQCIDLGGNNFSG-DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS 193
+ + L +DL N + S G+L+ L+++ N+ E+ L
Sbjct: 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172
Query: 194 NLEVLGLAYNSNFKPAMIPIEF-GMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNG 252
+ + +N + + +++ + + + + ++ G N +++I
Sbjct: 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG-------NGWTVDITGNFS 225
Query: 253 NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV----EALKLTDIDLSMNNLTGSIPE 308
N + + L L +++ + + + + + +DLS +
Sbjct: 226 NAISKSQAFSLILAHHIMGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 284
Query: 309 EFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI--GLHSALEG 366
F LK+L++L L N ++ + + L+ + N L L GL +
Sbjct: 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG-ELYSSNFYGLPK-VAY 342
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAFEN-NLSGAVPKSLGNCRTLRTVQLYSNRFSGE 425
++ N + + + + + + +L ++ ++ + L N+
Sbjct: 343 IDLQKNHIAI-IQD-----QTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV-T 395
Query: 426 LPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRGVGSW-KN 481
LP + + LS+N + + L+ ++ NRFS S +
Sbjct: 396 LPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPS 452
Query: 482 LIVFKASNNLFSGEIPVEL-----TSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLA 536
L N+ EL LSHL L L+ N L+ P T+L L+L
Sbjct: 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512
Query: 537 RNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIP-DEF 595
N L+ + + L LD+S NQ P + L+ +++ NK F
Sbjct: 513 SNRLTVLSHNDLPANL--EILDISRNQLL--APNPDVFVSLSVLDITHNKFICECELSTF 568
Query: 596 NNLA--YDDSFLNNSNLCV--------KNPIINLPKCPSRFRNSDKISSKHLALILVLAI 645
N + + + +L K L ++ + +
Sbjct: 569 INWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLFIVCTVTL 628
Query: 646 LVLLVTVSLSWFVVRDC 662
+ L+T+ C
Sbjct: 629 TLFLMTILTVTKFRGFC 645
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 1e-36
Identities = 115/655 (17%), Positives = 223/655 (34%), Gaps = 57/655 (8%)
Query: 69 TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDL 128
+C+F+ R ++TQ +P L + LS N I +LQ L+L
Sbjct: 1 SCSFDGRI-AFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLEL 55
Query: 129 SQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF-- 185
Y I + + L+ +DLG + P + L L L LY +
Sbjct: 56 GSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLK 115
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP-EAMSNLS- 243
+L L L L+ N + + FG L LK++ + +N I + + L
Sbjct: 116 DGYFRNLKALTRLDLSKN-QIRSLYLHPSFGKLNSLKSIDFS-SNQIFLVCEHELEPLQG 173
Query: 244 -SLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNN 301
+L +L N L + +N + L +SG + N
Sbjct: 174 KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG------NGWTVDITGNFSNA 227
Query: 302 LTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI---GKIPALKKFKVFNNSLSGVLPPEI 358
++ S ++ G +++ + + +++ + + + +
Sbjct: 228 ISKSQAFSLILAHHIMGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417
L+ ++ N+ + + + G LQ + N L + + + L
Sbjct: 287 ETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345
Query: 418 YSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGV 476
N + + + L +L L DN ++ + ++ + +S N+ + +
Sbjct: 346 QKNHIA-IIQDQTFKFLEKLQTLDLRDNALT-TIHFIP--SIPDIFLSGNKLV-TLPK-- 398
Query: 477 GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNNLNL 535
+ ++ + N L + +I L + HL L+L+ N+ S Q S SL L L
Sbjct: 399 INLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFL 458
Query: 536 ARNELSGEI-----PKAIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTFNLSSNKLY 588
N L L + L L+ N + +PP + L +L+SN+L
Sbjct: 459 GENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLTALRGLSLNSNRLT 517
Query: 589 GNIPDEF-NNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILV 647
++ NL L+ S N ++ P F + + H I +
Sbjct: 518 VLSHNDLPANL----EILDISR----NQLLAPN--PDVFVSLSVLDITHNKFICECELST 567
Query: 648 LLVTVSLSWFVVRDCLRRKRNRDPATWK---LTSFHQLGFTESNILSSLTESNLI 699
+ ++ + + P ++ L S G E +L SL S I
Sbjct: 568 FINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLFI 622
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 6e-41
Identities = 67/464 (14%), Positives = 140/464 (30%), Gaps = 31/464 (6%)
Query: 89 IPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQ 148
I I + ++ +S+ + ++ LDLS N +D+ + L+
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
++L N + LS L+TL L N +E+ ++E L A N+
Sbjct: 62 LLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNN---- 110
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLF-LL 266
+ + + K +++ N I + + S ++ L L N ++ + L
Sbjct: 111 -ISRVSCSRGQGKKNIYLAN-NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 267 NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
+ L L L N + ++ V KL +DLS N L + EF + + L +N L
Sbjct: 169 DTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL 226
Query: 327 SGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGG 386
+ ++ L+ F + N + V+ L
Sbjct: 227 V-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTVAKQTVKK-LTGQNEEEC 283
Query: 387 VLQGVVAFENNLSGAVPKS-LGNCRTLRTVQLYSNRFSG----ELPTGLWTTFNLSSLML 441
+ + + +P L+ + G L +
Sbjct: 284 TVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDA 343
Query: 442 SDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPV 498
+ + Q+ G + L + E+
Sbjct: 344 LKEQYR-TVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDG-TLQQAVGQIELQH 401
Query: 499 ELTSLSHLNTLLLDGNKLSGKL-PSQIVSWTSLNNLNLARNELS 541
S L L + Q V ++ + ++ +++ +
Sbjct: 402 ATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-33
Identities = 53/472 (11%), Positives = 128/472 (27%), Gaps = 66/472 (13%)
Query: 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204
+ + + ++ + ++ L L N + ++ + LE+L L+ N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN- 68
Query: 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF 264
+ L L+TL + N + E+ S+E L N++ +
Sbjct: 69 --VLYETL-DLESLSTLRTLDLNN-NYVQELL----VGPSIETLHAANNNIS-RVSCSRG 119
Query: 265 LLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTG-SIPEEFGKLKNLQLLGLF 322
++L +N ++ ++ +DL +N + + E L+ L L
Sbjct: 120 --QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177
Query: 323 SNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENL 382
N + +V + LK + +N L+ + PE + + + N+
Sbjct: 178 YNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV------- 227
Query: 383 CAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLWTTFNLSSLML 441
+ K+L + L L N F G L + ++
Sbjct: 228 ------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269
Query: 442 SDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELT 501
+ T +
Sbjct: 270 QTVKKLTGQNEEECTVPTLGHYGAYCCE----------------DLPAPFADR---LIAL 310
Query: 502 SLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSG 561
L G++ +L + + ++ + + I + ++L+
Sbjct: 311 KRKEHALLSGQGSETE-RLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKK 369
Query: 562 NQFSGEIP---PEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNL 610
++ +L + +E + L + +
Sbjct: 370 KALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEE 421
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 6e-28
Identities = 58/396 (14%), Positives = 109/396 (27%), Gaps = 68/396 (17%)
Query: 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNL 316
AI N + D+ L + S ++ + ++DLS N L+ + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 317 QLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSG 376
+LL L SN L + + L+ + NN +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ------------------------- 93
Query: 377 PLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNL 436
L ++ T+ +N S +
Sbjct: 94 ----------------------------ELLVGPSIETLHAANNNIS-RVSCSRGQ--GK 122
Query: 437 SSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSG-QIQRGVGSWKNLIVFKASNNLF 492
++ L++N I+ L +R++ + N S L N
Sbjct: 123 KNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181
Query: 493 SGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL 552
++ + L TL L NKL+ + + S + ++L N+L I KA+
Sbjct: 182 Y-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237
Query: 553 VMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV 612
+ DL GN F + ++ + + C
Sbjct: 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCE 297
Query: 613 KNPIINLPKCPSRFRNSDKISSKHLALILVLAILVL 648
P + + R + S + L
Sbjct: 298 DLPAPFADRLIALKRKEHALLSGQGSETERLECERE 333
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 4e-25
Identities = 44/275 (16%), Positives = 80/275 (29%), Gaps = 9/275 (3%)
Query: 71 TFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPG-EFPEFLYNCTKLQNLDLS 129
I L + IT + +DL N I F E + L++L+L
Sbjct: 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
N+ + + + L+ +DL N + + + + + L N+ K +
Sbjct: 178 YNFIYD-VKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKAL 233
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTE-ANLIGEIPEAMSNLSSLEIL 248
NLE L N F + F ++++T+ L G+ E + +
Sbjct: 234 RFSQNLEHFDLRGN-GFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYG 292
Query: 249 ALNGNHLEGAIPSGLFLLN--NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI 306
A L L L L + + +ID I
Sbjct: 293 AYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVI 352
Query: 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALK 341
+ + + L L +V L
Sbjct: 353 DQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD 387
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 7e-40
Identities = 73/373 (19%), Positives = 137/373 (36%), Gaps = 30/373 (8%)
Query: 99 LTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFS 158
T+ I FP + + L + + + + + + + G +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 159 GDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218
I I L+ L+ L L N+ + +L L L + N L
Sbjct: 58 -SIQ-GIEYLTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNK----ITDISALQNL 109
Query: 219 KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNI 278
L+ L++ E + I +I ++NL+ + L L NH S L + L L + ++
Sbjct: 110 TNLRELYLNE-DNISDIS-PLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESK 166
Query: 279 LSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
+ P + L L + L+ N + P L +L + N ++ P + +
Sbjct: 167 VKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANM 220
Query: 338 PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLP-ENLCAGGVLQGVVAFEN 396
L K+ NN ++ + + S L E+ TNQ S ++L L+ + N
Sbjct: 221 TRLNSLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDINAVKDLTK---LKMLNVGSN 275
Query: 397 NLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW 456
+S L N L ++ L +N+ E + NL++L LS N I+ P +
Sbjct: 276 QISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLS 333
Query: 457 NLTRLEISNNRFS 469
+ + +N
Sbjct: 334 KMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 4e-39
Identities = 89/396 (22%), Positives = 147/396 (37%), Gaps = 52/396 (13%)
Query: 171 LQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEAN 230
TL N FP DL+ L S + L+ + L +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDV----VTQEELESITKLVVAG-E 54
Query: 231 LIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL 290
+ I + L++LE L LNGN + P L L LT L++ N ++ S+++ L
Sbjct: 55 KVASIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT--DISALQNL 109
Query: 291 K-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNS 349
L ++ L+ +N++ P L + L L +NH + + + L V +
Sbjct: 110 TNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESK 166
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
+ V I + L ++ NQ L +
Sbjct: 167 VKDV--TPIANLTDLYSLSLNYNQIEDI--------------------------SPLASL 198
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFS 469
+L Y N+ + T + L+SL + +N I+ P LT LEI N+ S
Sbjct: 199 TSLHYFTAYVNQITD--ITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQIS 256
Query: 470 GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS 529
V L + +N S +I L +LS LN+L L+ N+L + I T+
Sbjct: 257 DI--NAVKDLTKLKMLNVGSNQIS-DIS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312
Query: 530 LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
L L L++N ++ P + SL M S D +
Sbjct: 313 LTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 144 bits (367), Expect = 5e-38
Identities = 68/353 (19%), Positives = 139/353 (39%), Gaps = 28/353 (7%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
L+ +T + +L+++T + ++ + + + T L+ L+L+ N
Sbjct: 21 LAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV--ASIQGIEYLTNLEYLNLNGN 76
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
P + + L + +G N + DI ++ L+ L+ LYL + + + +
Sbjct: 77 QITDISP--LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLNEDNISD--ISPLAN 130
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
L+ + L L N N + L L +TE + + ++ ++NL+ L L+LN
Sbjct: 131 LTKMYSLNLGANHNLS---DLSPLSNMTGLNYLTVTE-SKVKDVT-PIANLTDLYSLSLN 185
Query: 252 GNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEF 310
N +E P L L +L Y N ++ P V + L + + N +T P
Sbjct: 186 YNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--L 239
Query: 311 GKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVS 370
L L L + +N +S ++ + LK V +N +S + + S L ++
Sbjct: 240 ANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLN 295
Query: 371 TNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS 423
NQ E + L + +N+++ P L + + + +
Sbjct: 296 NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 3e-34
Identities = 67/359 (18%), Positives = 129/359 (35%), Gaps = 46/359 (12%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
I +I ++L+ L + + L ++T+L + ++ I
Sbjct: 10 APINQI-FPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA-SIQGIEYL 65
Query: 290 LKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNS 349
L ++L+ N +T P L L L + +N ++ +++ + L++ + ++
Sbjct: 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDN 121
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
+S + + + + + N L N
Sbjct: 122 ISDI--SPLANLTKMYSLNLGANHNLS-------------------------DLSPLSNM 154
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFS 469
L + + ++ T + +L SL L+ N I P + +L N+ +
Sbjct: 155 TGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQIT 212
Query: 470 GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS 529
V + L K NN + P L +LS L L + N++S + + T
Sbjct: 213 DIT--PVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTK 266
Query: 530 LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKL 587
L LN+ N++S + +L + SL L+ NQ E IG L L T LS N +
Sbjct: 267 LKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-38
Identities = 56/338 (16%), Positives = 112/338 (33%), Gaps = 26/338 (7%)
Query: 89 IPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQ 148
I I + ++ +S+ + ++ LDLS N +D+ + L+
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
++L N + + LS L+TL L N +E+ ++E L A N+
Sbjct: 62 LLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNN---- 110
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-- 265
+ + + K +++ N I + + S ++ L L N ++ +
Sbjct: 111 -ISRVSCSRGQGKKNIYLAN-NKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAAS 167
Query: 266 LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNH 325
+ L L L N + ++ V KL +DLS N L + EF + + L +N
Sbjct: 168 SDTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNK 225
Query: 326 LSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAG 385
L + ++ L+ F + N V+ L
Sbjct: 226 LV-LIEKALRFSQNLEHFDLRGNGFHC-GTLRDFFSKNQRVQTVAKQTVKK-LTGQNEEE 282
Query: 386 GVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS 423
+ + + +P R + L +
Sbjct: 283 CTVPTLGHYGAYCCEDLPAPFA----DRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 6e-30
Identities = 55/363 (15%), Positives = 105/363 (28%), Gaps = 69/363 (19%)
Query: 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNL 316
AI N + D+ L + S ++ + ++DLS N L+ + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 317 QLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSG 376
+LL L SN L + + L+ + NN +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ------------------------- 93
Query: 377 PLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNL 436
L ++ T+ +N S +
Sbjct: 94 ----------------------------ELLVGPSIETLHAANNNIS-RVSCSRGQ--GK 122
Query: 437 SSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSG-QIQRGVGSWKNLIVFKASNNLF 492
++ L++N I+ L +R++ + N S L N
Sbjct: 123 KNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181
Query: 493 SGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL 552
++ + L TL L NKL+ + + S + ++L N+L I KA+
Sbjct: 182 Y-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237
Query: 553 VMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV 612
+ DL GN F K + + + + + + C
Sbjct: 238 NLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCC 296
Query: 613 KNP 615
++
Sbjct: 297 EDL 299
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-29
Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 22/311 (7%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
+ + +V + L ++Q + L ++LSSN + E + + + L+
Sbjct: 27 ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL-YETLDL-ESLSTLRT 84
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
LDL+ NY ++ ++ + NN S + S G+ + +YL N+
Sbjct: 85 LDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSCSRGQG--KKNIYLANNKITMLR 136
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL 245
+ G S ++ L L N L+ L + N I ++ + L
Sbjct: 137 DLDEGCRSRVQYLDLKLN-EIDTVNFAELAASSDTLEHLNLQY-NFIYDVK-GQVVFAKL 193
Query: 246 EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTG 304
+ L L+ N L + +T + L +N L I ++ + L DL N
Sbjct: 194 KTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH- 250
Query: 305 SIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSAL 364
KN ++ + + ++ + + + LP A
Sbjct: 251 CGTLRDFFSKNQRVQTVAKQTVK-KLTGQNEEECTVPTLGHYGAYCCEDLPA----PFAD 305
Query: 365 EGFEVSTNQFS 375
+ +
Sbjct: 306 RLIALGHHHHH 316
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 1e-36
Identities = 69/309 (22%), Positives = 119/309 (38%), Gaps = 65/309 (21%)
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI 744
+ E LIGSGG GQV++ G+ +KR+ + N+K E+E ++
Sbjct: 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAERE----VKA 57
Query: 745 LGTIRHANIVKLWCCISSENSKL----------------LVYEYMENQSLDRWLHGRKRS 788
L + H NIV C + + E+ + +L++W+ R+
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 789 LVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848
+ L QI +G+ Y+H + ++I+RD+K SNI L + KI
Sbjct: 118 KLD-----KVLALELFE--QIT----KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKI 163
Query: 849 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 908
DFGL L G+ G+ Y +PE + +++D+Y+ G++L EL+
Sbjct: 164 GDFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC-- 218
Query: 909 NYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL---PSS 965
E L GI + ++ + L P
Sbjct: 219 --------------DTAFETSKFFTDLRDGIISDIFDKK------EKTLLQKLLSKKPED 258
Query: 966 RPSMKEVLQ 974
RP+ E+L+
Sbjct: 259 RPNTSEILR 267
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 1e-36
Identities = 59/299 (19%), Positives = 111/299 (37%), Gaps = 53/299 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G GG G V+ A+KRI + ++ + E++ L + H IV+ +
Sbjct: 12 CLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 758 CCISSENS---------KLLVY---EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+N+ K+ +Y + ++L W++GR LH
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI----EERERSVCLHIFL 125
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
QIA + + ++H + ++HRD+K SNI + K+ DFGL + + E T
Sbjct: 126 --QIA----EAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 866 MSAVAGSFG----------YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 915
+ ++ Y +PE + + K+DI+S G++L EL+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQM----- 231
Query: 916 SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
E + P + ++ Y + S P RP +++
Sbjct: 232 -----------ERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-35
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG+G G+ +I G+ + K + + + + ++ ++E+ +L ++H NIV+ +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 758 CCISSENSKLL--VYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
I + L V EY E L + ++R + + VL T Q+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-----EEFVLRVMT--QLT--- 121
Query: 814 AQGLCYMH--HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
L H D ++HRD+K +N+ LD + K+ DFGLA++L + V G
Sbjct: 122 -LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTFV-G 178
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ Y +PE NEK DI+S G +L EL LA I
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA----------GKI 228
Query: 932 TDALDKGIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+G Y +E+ + L + RPS++E+L+
Sbjct: 229 R----EGKFRRIPYRYSDELNEIITRML---NLKDYHRPSVEEILE 267
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 3e-35
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 37/280 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G+ + G +K I N +++ K +E E+ +L ++H NIV+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
S +V +Y E L + ++ +K L +L W QI L
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ-----EDQILDWFV--QIC----LAL 138
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
++H +I+HRD+KS NI L + ++ DFG+A++L + + G+ Y +
Sbjct: 139 KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACI-GTPYYLS 193
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDK 937
PE N K DI++ G VL EL T K A +L I
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV----------LKII----S 239
Query: 938 GIAEP---CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
G P Y ++ ++ P RPS+ +L+
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQ---LFKRNPRDRPSVNSILE 276
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-35
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 31/284 (10%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G +VYR G VA+K++ ++ K + I EI++L + H N++K +
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 758 CCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+N +V E + L R + +++ L+ + V + Q+
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP-----ERTVWKYFV--QLC----S 147
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML-AKQGEPHTMSAVAGSFG 874
L +MH +++HRD+K +N+ + + K+ D GL + +K H+ + G+
Sbjct: 148 ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS---LVGTPY 201
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
Y +PE + N K DI+S G +L E+ + + + +L + I
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP-FYGDKMNLYSLCKK-------IEQC 253
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ Y EE+ + + C + P RP + V + +R
Sbjct: 254 DYPPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAKR 294
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 8e-35
Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G GG VY D VA+K I+ + ++ K F E+ + H NIV +
Sbjct: 18 KLGGGGMSTVYLAEDTI-LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
++ LV EY+E +L ++ L T + G
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-------------LSVDTAINFTNQILDG 123
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ + H +I+HRD+K NIL+DS KI DFG+AK L++ T + V G+ YF
Sbjct: 124 IKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHVLGTVQYF 179
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP-ITDAL 935
+PE A +E DIYS G+VL E++ G+ G+ S+ A +H + P +T +
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI---AIKHIQDSVPNVTTDV 236
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRC 979
K I P L + L T ++R +++E+ L
Sbjct: 237 RKDI--PQSLSN------VILRATEKDKANRYKTIQEMKDDLSSV 273
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-34
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 691 SSLTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
L +G G G+V + + GE VAVK + + + EIEIL
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILR 78
Query: 747 TIRHANIVKLWCCISSENSK--LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ H NIVK + + L+ E++ + SL +L K +
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL------------K 126
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+L+ A+ +G+ Y+ + Q +HRD+ + N+L++SE + KI DFGL K + E +
Sbjct: 127 QQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY 183
Query: 865 TMSAVAGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
T+ S ++APE +K D++SFGV L EL+T Y D +S +
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMALFLK 238
Query: 924 HYAEEKP------ITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
+ + L +G + P C E VY+L C PS+R S + ++
Sbjct: 239 MIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDE----VYQLMRKCWEFQPSNRTSFQNLI 294
Query: 974 QILRR 978
+
Sbjct: 295 EGFEA 299
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-34
Identities = 72/318 (22%), Positives = 118/318 (37%), Gaps = 37/318 (11%)
Query: 666 KRNRDPATWKLTSFHQLGFTESNIL---SSLTESNLIGSGGSGQVYRIDINGAGEFVAVK 722
+ P T K + + L IG G G+V+ + VAVK
Sbjct: 86 LSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK 145
Query: 723 RIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL 782
L L+ +F+ E IL H NIV+L + + +V E ++ +L
Sbjct: 146 SC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 783 HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 842
L T LQ+ AA G+ Y+ IHRD+ + N L+
Sbjct: 204 RTEGAR------------LRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTE 248
Query: 843 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY--FAPEYAYTTKVNEKIDIYSFGVVLL 900
+ KI+DFG+++ + S APE + + + D++SFG++L
Sbjct: 249 KNVLKISDFGMSREE--ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 901 ELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTS 960
E + + Y + S + + ++KG PC V+RL C +
Sbjct: 307 ETFSLGASPYPN--LSNQQ-----------TREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 961 TLPSSRPSMKEVLQILRR 978
P RPS + Q L+
Sbjct: 354 YEPGQRPSFSTIYQELQS 371
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 9e-34
Identities = 82/301 (27%), Positives = 127/301 (42%), Gaps = 37/301 (12%)
Query: 691 SSLTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
L + +G G G+V +G GE VAVK + + + EI+IL
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILR 88
Query: 747 TIRHANIVKLW--CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
T+ H +I+K C + S LV EY+ SL +L +H +
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP--------------RHSIGLA 134
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
L A +G+ Y+H IHRD+ + N+LLD++ KI DFGLAK + + E +
Sbjct: 135 QLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191
Query: 865 TMSAVAGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+ S ++APE K D++SFGV L EL+T + D S
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-----HCDSSQSPPTKFLE 246
Query: 924 HYAEEKP------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ +T+ L++G P + VY L C T S RP+ + ++ IL+
Sbjct: 247 LIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
Query: 978 R 978
Sbjct: 307 T 307
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 1e-33
Identities = 81/398 (20%), Positives = 146/398 (36%), Gaps = 68/398 (17%)
Query: 227 TEANLIGEIPEAMSN--LSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIP 284
E+ + + M + +L + + L +P L ++T L + DN L+ +P
Sbjct: 22 EESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLP 77
Query: 285 SSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFK 344
+ +L +++S N LT S+P L L + HL L K
Sbjct: 78 ALPP--ELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLW 127
Query: 345 VFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPK 404
+F N L+ LP L+ VS NQ + LP L + A+ N L+ ++P
Sbjct: 128 IFGNQLT-SLPVLPP---GLQELSVSDNQLAS-LPALPSE---LCKLWAYNNQLT-SLPM 178
Query: 405 SLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEIS 464
+ L + N+ + LPT L L +N ++ LP+ L L +S
Sbjct: 179 LPSGLQELS---VSDNQLA-SLPTLP---SELYKLWAYNNRLT-SLPA-LPSGLKELIVS 229
Query: 465 NNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI 524
NR + +PV + L L + GN+L+ LP
Sbjct: 230 GNRLT-------------------------SLPVLPSELKELM---VSGNRLT-SLPMLP 260
Query: 525 VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSS 584
+ L +L++ RN+L+ +P+++ L +++L GN S E + + + S
Sbjct: 261 ---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGYSG 315
Query: 585 NKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKC 622
+ ++ L ++ V
Sbjct: 316 PIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPA 353
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 135 bits (340), Expect = 6e-33
Identities = 72/442 (16%), Positives = 135/442 (30%), Gaps = 114/442 (25%)
Query: 93 ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152
C +++ + + P+ L + L + N +P L+ +++
Sbjct: 36 ACLNNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLTS-LP---ALPPELRTLEV 88
Query: 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIP 212
GN + +P L EL + P L L + G
Sbjct: 89 SGNQLT-SLPVLPPGLLELSIFSNPLTH----LPALPSGLCKLWIFG------------- 130
Query: 213 IEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQL 272
N + +P L L ++ N L ++P+ L + L +L
Sbjct: 131 -----------------NQLTSLPVLPPGLQELS---VSDNQLA-SLPA---LPSELCKL 166
Query: 273 FLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332
+ Y+N L+ +P L ++ +S N L S+P +L L +N L+ +PA
Sbjct: 167 WAYNNQLT-SLPMLPS--GLQELSVSDNQLA-SLPTLPSELYKLWAY---NNRLT-SLPA 218
Query: 333 SIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVV 392
LK+ V N L+ LP L+ VS N+ +
Sbjct: 219 LPSG---LKELIVSGNRLTS-LPVLPS---ELKELMVSGNRLT----------------- 254
Query: 393 AFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPS 452
++P +L +Y N+ + LP L + +++ L N +S E
Sbjct: 255 --------SLPMLPSGLLSLS---VYRNQLT-RLPESLIHLSSETTVNLEGNPLS-ERTL 301
Query: 453 KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLD 512
+ +T + ++ P E +L L
Sbjct: 302 QALREITSAPGYSGPII------------------RFDMAGASAPRETRALHLAAADWLV 343
Query: 513 GNKLSGKLPSQIVSWTSLNNLN 534
+ P+ W +
Sbjct: 344 PAREG--EPAPADRWHMFGQED 363
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 1e-29
Identities = 79/466 (16%), Positives = 148/466 (31%), Gaps = 124/466 (26%)
Query: 143 RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAY 202
+G +++G + + +P + + + TL + N + P +L LEV G
Sbjct: 38 LNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPALPPELRTLEVSG--- 90
Query: 203 NSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSG 262
N + +P L L I + HL
Sbjct: 91 ---------------------------NQLTSLPVLPPGLLELSIFSNPLTHLPA----- 118
Query: 263 LFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLF 322
L + L +L+++ N L+ +P L ++ +S N L S+P +L L
Sbjct: 119 --LPSGLCKLWIFGNQLT-SLPVLPPGL--QELSVSDNQLA-SLPALPSELCKLWAYN-- 170
Query: 323 SNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENL 382
N L+ +P L++ V +N L+ LP L N+ +
Sbjct: 171 -NQLT-SLPMLPSG---LQELSVSDNQLA-SLPTLPS---ELYKLWAYNNRLT------- 214
Query: 383 CAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLS 442
++P + L + NR + LP L LM+S
Sbjct: 215 ------------------SLPALPSGLKELI---VSGNRLT-SLPVLP---SELKELMVS 249
Query: 443 DNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTS 502
N ++ LP L L + N+ + +P L
Sbjct: 250 GNRLT-SLPM-LPSGLLSLSVYRNQLT-------------------------RLPESLIH 282
Query: 503 LSHLNTLLLDGNKLSGKLPSQIVSWTSL---NNLNLARNELSGEIPKAIGSLLVMVSLDL 559
LS T+ L+GN LS + + TS + + + P+ +L + + L
Sbjct: 283 LSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWL 342
Query: 560 SGNQFSGEIPPEI-----GQLKLNTFNLSSNKLYGNIPDEFNNLAY 600
+ P + + + F+L ++L + + +
Sbjct: 343 VPAREGEPAPADRWHMFGQEDNADAFSLFLDRLS-ETENFIKDAGF 387
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 56/311 (18%), Positives = 99/311 (31%), Gaps = 39/311 (12%)
Query: 87 QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG 146
+P + L L+ +P + L L + N +P G
Sbjct: 94 TSLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGNQLTS-LPVL---PPG 142
Query: 147 LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNF 206
LQ + + N + +P L L+ Y N+ + P L+ L ++ N
Sbjct: 143 LQELSVSDNQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPS---GLQELSVSDNQL- 193
Query: 207 KPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLL 266
A +P L KL N + +P S L+ L ++GN L ++P L
Sbjct: 194 --ASLPTLPSELYKLWAY----NNRLTSLPA---LPSGLKELIVSGNRLT-SLPV---LP 240
Query: 267 NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
+ L +L + N L+ +P L + + N LT +PE L + + L N L
Sbjct: 241 SELKELMVSGNRLT-SLPMLPS--GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 296
Query: 327 SGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGG 386
S ++ +I + + AL + +
Sbjct: 297 SERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALH--LAAADWLVPAREGEPAPAD 354
Query: 387 VLQGVVAFENN 397
+N
Sbjct: 355 RWHMFGQEDNA 365
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 1e-33
Identities = 79/313 (25%), Positives = 134/313 (42%), Gaps = 35/313 (11%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
++G GG +V+ D+ VAVK + + + F E + + H IV +
Sbjct: 19 ILGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 757 --WCCISSENSKL--LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ L +V EY++ +L +H + +++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------MTPKRAIEVIAD 124
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM-SAVAG 871
A Q L + H + IIHRDVK +NI++ + K+ DFG+A+ +A G T +AV G
Sbjct: 125 ACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ Y +PE A V+ + D+YS G VL E++TG+ GD S+ A++H E+
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---AYQHVREDPIP 238
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRCCPTENYGGKKM 990
A +G+ L+ + L + P +R + E+ L R E K+
Sbjct: 239 PSARHEGL--SADLDA------VVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKV 290
Query: 991 GRDVDSAPLLGTA 1003
D + LL +A
Sbjct: 291 LTDAERTSLLSSA 303
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-33
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 44/312 (14%)
Query: 691 SSLTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
L + +G G G V + G VAVK++ + +++F EI+IL
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQILK 79
Query: 747 TIRHANIVKLW--CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ IVK S LV EY+ + L +L + L +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA------------S 127
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
L + +G+ Y+ + + +HRD+ + NIL++SE KIADFGLAK+L + +
Sbjct: 128 RLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 184
Query: 865 TMSAVAGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+ S ++APE + + D++SFGVVL EL T Y D+ S + R
Sbjct: 185 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-----YCDKSCSPSAEFLR 239
Query: 924 HYAEEKP------ITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
E+ + + L++G + P C E V+ L +C + P RPS +
Sbjct: 240 MMGCERDVPALSRLLELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALG 295
Query: 974 QILRRCCPTENY 985
L
Sbjct: 296 PQLDMLWSGSRG 307
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 63/289 (21%), Positives = 107/289 (37%), Gaps = 48/289 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
++G G G + + VAVKRI + ++E +++L H N+++
Sbjct: 31 VLGHGAEGTIVYRGMFD-NRDVAVKRI--LPECFSFADRE----VQLLRESDEHPNVIRY 83
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+C + + E +L ++ + + +L Q G
Sbjct: 84 FCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAH---LGLEPITLLQ-----QTT----SG 130
Query: 817 LCYMHHDCTPQIIHRDVKSSNILL-----DSEFKAKIADFGLAKML-AKQGEPHTMSAVA 870
L ++H I+HRD+K NIL+ + KA I+DFGL K L + S V
Sbjct: 131 LAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 871 GSFGYFAPEY---AYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
G+ G+ APE +DI+S G V +++ +G A +
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL 247
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALI--CTSTLPSSRPSMKEVLQ 974
+ + + IA LI + P RPS K VL+
Sbjct: 248 DCLHPEKHEDVIAR-------------ELIEKMIAMDPQKRPSAKHVLK 283
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-33
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+ +T + +G G G+VY VAVK + K + +EF+ E ++ I+H
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 275
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N+V+L + E ++ E+M +L +L R + L +A
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----------QEVSAVVLLYMA 324
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ IHR++ + N L+ K+ADFGL++++ G+ +T A
Sbjct: 325 TQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHA-G 378
Query: 871 GSFGYF--APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 927
F APE K + K D+++FGV+L E+ T G G + + + E + Y
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
E+P E C + VY L C PS RPS E+ Q
Sbjct: 439 ERP----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAF 473
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-33
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 35/301 (11%)
Query: 691 SSLTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
L +G G G V + GE VAVK++ + ++ ++F EIEIL
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILK 66
Query: 747 TIRHANIVKLW--CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+++H NIVK C + + L+ EY+ SL +L H+ +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK------------HKERIDHI 114
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
LQ +G+ Y+ T + IHRD+ + NIL+++E + KI DFGL K+L + E
Sbjct: 115 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF 171
Query: 865 TMSAVAGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+ S ++APE +K + D++SFGVVL EL T E + +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 924 HYAE--EKPITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ + + L + P C E +Y + C + + RPS +++ +
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVD 287
Query: 978 R 978
+
Sbjct: 288 Q 288
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 6e-33
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIV 754
IGSGGS +V+++ +N + A+K + N + + + + EI L ++ I+
Sbjct: 34 KQIGSGGSSKVFQV-LNEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L+ ++ +V E N L+ WL +K+S+ + +
Sbjct: 92 RLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSI---DPWERKSYWK-----NML---- 137
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ + +H I+H D+K +N L+ K+ DFG+A + + G+
Sbjct: 138 EAVHTIHQH---GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 875 YFAPE-----------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y PE +K++ K D++S G +L + GK
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 6e-33
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 35/301 (11%)
Query: 691 SSLTESNLIGSGGSGQVYR----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
L +G G G V + GE VAVK++ + ++ ++F EIEIL
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILK 97
Query: 747 TIRHANIVKLW--CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+++H NIVK C + + L+ EY+ SL +L H+ +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK------------HKERIDHI 145
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
LQ +G+ Y+ T + IHRD+ + NIL+++E + KI DFGL K+L + E +
Sbjct: 146 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYY 202
Query: 865 TMSAVAGS-FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+ S ++APE +K + D++SFGVVL EL T E + +
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 262
Query: 924 HYAEEKP--ITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ + + L + P C E +Y + C + + RPS +++ +
Sbjct: 263 KQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVD 318
Query: 978 R 978
+
Sbjct: 319 Q 319
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 8e-33
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIV 754
IGSGGS +V+++ +N + A+K + N + + + + EI L ++ I+
Sbjct: 15 KQIGSGGSSKVFQV-LNEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQHSDKII 72
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L+ ++ +V E N L+ WL +K+S+ + +
Sbjct: 73 RLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSI---DPWERKSYWK-----NML---- 118
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ + +H I+H D+K +N L+ K+ DFG+A + + G+
Sbjct: 119 EAVHTIHQH---GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 875 YFAPE-----------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y PE +K++ K D++S G +L + GK
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 3e-32
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 33/223 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIV 754
IGSGGS +V+++ +N + A+K + N + + + + EI L ++ I+
Sbjct: 62 KQIGSGGSSKVFQV-LNEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+L+ ++ +V E N L+ WL +K + +
Sbjct: 120 RLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSI----DPWERKSYWK-----NML---- 165
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ + +H I+H D+K +N L+ K+ DFG+A + + G+
Sbjct: 166 EAVHTIHQH---GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221
Query: 875 YFAPE-----------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y PE +K++ K D++S G +L + GK
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-32
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 39/300 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IGSG + V E VA+KRI N K ++ E + EI+ + H NIV +
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMD-ELLKEIQAMSQCHHPNIVSYYT 80
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAAQ 815
++ LV + + S+ ++ + +H IA +
Sbjct: 81 SFVVKDELWLVMKLLSGGSV--------LDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA---VAGS 872
GL Y+H + IHRDVK+ NILL + +IADFG++ LA G+ G+
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 873 FGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 927
+ APE Y + K DI+SFG+ +EL TG A Y +
Sbjct: 190 PCWMAPEVMEQVRGY----DFKADIWSFGITAIELATG-AAPYHKYPPM---KVLMLTLQ 241
Query: 928 EKPITDALDKGIAEPCYLEEMTTVYR--LALICTSTLPSSRPSMKEVLQ--ILRRCCPTE 983
P + L+ G+ + L++ +R ++L C P RP+ E+L+ ++ E
Sbjct: 242 NDPPS--LETGVQDKEMLKKYGKSFRKMISL-CLQKDPEKRPTAAELLRHKFFQKAKNKE 298
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 7e-32
Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 31/224 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G GG V ++ G F A+KRI Q+ +E E ++ H NI++L
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 758 CCISSENSK----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
E L+ + + +L + K + L L + +G
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD---------KGNFLTEDQILWLLLGI 143
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA--- 870
+GL +H HRD+K +NILL E + + D G E +
Sbjct: 144 CRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 871 ----GSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE ++ ++E+ D++S G VL ++ G+
Sbjct: 201 AAQRCTISYRAPELFSVQSHCV-IDERTDVWSLGCVLYAMMFGE 243
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-31
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G GQV + + A+K+I + ++ ++E+ +L ++ H +V+ +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 758 CCISSENSKL-------------LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ + + EY EN +L +H +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ------RDEYWRLF 122
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML------- 857
QI + L Y+H IIHRD+K NI +D KI DFGLAK +
Sbjct: 123 R--QIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 858 -----AKQGEPHTMSAVAGSFGYFAPE-YAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 911
G +++ G+ Y A E T NEKID+YS G++ E++ + G
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTG 231
Query: 912 DEHTSL 917
E ++
Sbjct: 232 MERVNI 237
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
L+G G VYR + G VA+K I + + E++I ++H +I++L+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
N LV E N ++R+L R + S + +H +H QI G+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPF---SENEARHFMH-----QI----ITGM 125
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYF 876
Y+H I+HRD+ SN+LL KIADFGLA L E +T+ G+ Y
Sbjct: 126 LYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPNYI 179
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+PE A + + D++S G + L+ G+
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-31
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 42/291 (14%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+ +T + +G G G+VY VAVK + K + +EF+ E ++ I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
N+V+L + E ++ E+M +L +L R + L +A
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----------QEVSAVVLLYMA 117
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ IHRD+ + N L+ K+ADFGL++++ G+ +T A
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYT----A 168
Query: 871 GSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ F APE K + K D+++FGV+L E+ T + Y
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------PGID 217
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + + L+K VY L C PS RPS E+ Q
Sbjct: 218 LSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-31
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 36/225 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G + V+R G+ A+K NN + ++ + E E+L + H NIVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF-NNISFLRPVDVQM-REFEVLKKLNHKNIVKLF 73
Query: 758 CCISSENSKL--LVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
++ L+ E+ SL L L S VL +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL---PESEFLIVLR-----DV---- 121
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILL----DSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
G+ ++ + I+HR++K NI+ D + K+ DFG A+ L + ++
Sbjct: 122 VGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSL 175
Query: 870 AGSFGYFAPE--------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y P+ + K +D++S GV TG
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-31
Identities = 58/294 (19%), Positives = 92/294 (31%), Gaps = 52/294 (17%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV-- 754
L+G GG G VY D VA+K + + E G ++ ++V
Sbjct: 41 LVGRGGMGDVYEAEDTV-RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99
Query: 755 --------KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+L+ + + L L + L P
Sbjct: 100 HDFGEIDGQLY----------VDMRLINGVDLAAMLRRQGP-------------LAPPRA 136
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
+ I L H HRDVK NIL+ ++ A + DFG+A +
Sbjct: 137 VAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL- 192
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926
G+ Y APE + + DIY+ VL E +TG GD L+ H
Sbjct: 193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD---QLSV-MGAHIN 248
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR-PSMKEVLQILRRC 979
+ P + GI P + + + P R + ++
Sbjct: 249 QAIPRPSTVRPGI--PVAFDA------VIARGMAKNPEDRYVTCGDLSAAAHAA 294
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 7e-31
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 38/288 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G G G+V+ NG VA+K + K + F+ E +++ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL----KPGTMSPEAFLQEAQVMKKLRH 238
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ +S E +V EYM SL +L G L P + +A
Sbjct: 239 EKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETG-----------KYLRLPQLVDMA 286
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A G+ Y+ +HRD++++NIL+ K+ADFGLA+++ + +
Sbjct: 287 AQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQG 340
Query: 871 GSFGYF--APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
F APE A + K D++SFG++L EL T Y E
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--MVNRE--------- 389
Query: 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ D +++G PC E +++ L C P RP+ + + L
Sbjct: 390 --VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 7e-31
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
++G G G VY D++ +A+K I + + + + EI + ++H NIV+
Sbjct: 29 VLGKGTYGIVYAGRDLS-NQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
S + E + SL L + L ++ + QI +G
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT------KQI----LEG 134
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
L Y+H + QI+HRD+K N+L+++ KI+DFG +K LA P T + G+ Y
Sbjct: 135 LKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET-FTGTLQY 189
Query: 876 FAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE Y DI+S G ++E+ TGK
Sbjct: 190 MAPEIIDKGPRGYGKAA----DIWSLGCTIIEMATGK 222
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 8e-31
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 34/217 (15%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G+V+R+ G AVK++ +LE + E+ + IV L
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKV--------RLEVFRVEELVACAGLSSPRIVPL 115
Query: 757 WCCISSENSKLLVYEYMENQSLDRWL--HGR-KRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+ + + E +E SL + + G L
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL---YYLGQAL------------ 160
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPHTMSA---V 869
+GL Y+H +I+H DVK+ N+LL S+ +A + DFG A L G ++ +
Sbjct: 161 -EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ + APE + K+DI+S ++L ++ G
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-30
Identities = 102/512 (19%), Positives = 184/512 (35%), Gaps = 56/512 (10%)
Query: 98 NLTTIDLSSN---SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
+ +D S N +P + K L++SQNY SDI +S L+ + +
Sbjct: 1 SEFLVDRSKNGLIHVPKDLS------QKTTILNISQNYISELWTSDILSLSKLRILIISH 54
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE 214
N EL+ L L N+ NL+ L L++N F I E
Sbjct: 55 NRIQYLDISVFKFNQELEYLDLSHNKLV-KIS--CHPTVNLKHLDLSFN-AFDALPICKE 110
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFL 274
FG + +LK L ++ +L +++L+ ++L + G N L +
Sbjct: 111 FGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHI 170
Query: 275 YDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI 334
+ E ++ T +L ++N+ + F + L+
Sbjct: 171 -VFPTNKEFHFILDVSVKTVANLELSNIKC--------VLEDNKCSYFLSILAKLQTNPK 221
Query: 335 GKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAF 394
L + NS +L ++ H+ + F +S + G L
Sbjct: 222 LSNLTLNNIETTWNSFIRIL--QLVWHTTVWYFSISNVKLQGQLDFRD------------ 267
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF---NLSSLMLSDNTISGELP 451
S + + L Q+ S+ F + ++ F N+ + +S + L
Sbjct: 268 -------FDYSGTSLKALSIHQVVSDVFG-FPQSYIYEIFSNMNIKNFTVSGTRMVHMLC 319
Query: 452 SKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFS--GEIPVELTSLSHLNTL 509
L+ SNN + + G L N +I T + L L
Sbjct: 320 PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379
Query: 510 LLDGNKLSGKLPSQIVSW-TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEI 568
+ N +S SW SL +LN++ N L+ I + + + + LDL N+ I
Sbjct: 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKV--LDLHSNKIK-SI 436
Query: 569 PPEIGQL-KLNTFNLSSNKLYGNIPDE-FNNL 598
P ++ +L L N++SN+L ++PD F+ L
Sbjct: 437 PKQVVKLEALQELNVASNQL-KSVPDGIFDRL 467
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-24
Identities = 84/502 (16%), Positives = 169/502 (33%), Gaps = 54/502 (10%)
Query: 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYF 133
T +++ I++ I L L + +S N I +L+ LDLS N
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81
Query: 134 VGPIPSDIDRISGLQCIDLGGNNFSGDIPRS--IGRLSELQTLYLYMNEFNGTFPKEIGD 191
V I L+ +DL N F +P G +S+L+ L L + I
Sbjct: 82 VK-ISC--HPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAH 137
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
L+ +VL + + + + L+ T + + + ++S + L
Sbjct: 138 LNISKVLLVLGETYGE----KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLE 193
Query: 252 GNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFG 311
++++ +L + + + + + L L +I+ + N+ + +
Sbjct: 194 LSNIK-------CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRIL--QLV 244
Query: 312 KLKNLQLLGLFSNHLSGEVPASIGKIP--ALKKFKVFNNSLSGVLPPEIGLHSALEGFEV 369
+ + + L G++ +LK + P+ ++ +
Sbjct: 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNI 304
Query: 370 STNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTG 429
+ + +N + +
Sbjct: 305 KNFTV---------------------SGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFEN 343
Query: 430 LWTTFNLSSLMLSDNTISGELPSKTAW-----NLTRLEISNNRFSGQIQRGVGSW-KNLI 483
L +L+L N + EL +L +L+IS N S ++G SW K+L+
Sbjct: 344 CGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402
Query: 484 VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGE 543
S+N+ + I L + L L NK+ +P Q+V +L LN+A N+L
Sbjct: 403 SLNMSSNILTDTIFRCLPPR--IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-S 458
Query: 544 IPK-AIGSLLVMVSLDLSGNQF 564
+P L + + L N +
Sbjct: 459 VPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 8e-22
Identities = 63/358 (17%), Positives = 118/358 (32%), Gaps = 31/358 (8%)
Query: 20 LLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS------------SPCDWPE 67
L I ++ +L + +P LQ + + S D
Sbjct: 127 LEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 68 ITCTFNSVTGIS--LRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEF-----LYNC 120
T ++ I L + + + N +L+ N+I + F L
Sbjct: 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISG-----LQCIDLGGNNFSGDIPRSIGRLSELQTLY 175
T + +S G + SG L + + F S +
Sbjct: 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKN 306
Query: 176 LYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL--IG 233
++ +S L + N + G L +L+TL + L +
Sbjct: 307 FTVSGTRMVHMLCPSKISPFLHLDFSNNLL--TDTVFENCGHLTELETLILQMNQLKELS 364
Query: 234 EIPEAMSNLSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEALKL 292
+I E + + SL+ L ++ N + G +L L + NIL+ + ++
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT-DTIFRCLPPRI 423
Query: 293 TDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSL 350
+DL N + SIP++ KL+ LQ L + SN L ++ +L+K + N
Sbjct: 424 KVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 4e-07
Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 6/208 (2%)
Query: 488 SNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKA 547
S N S ++ SLS L L++ N++ S L L+L+ N+L +I
Sbjct: 29 SQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KIS-- 85
Query: 548 IGSLLVMVSLDLSGNQF-SGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDSFL 605
+ + LDLS N F + I E G + +L LS+ L + +L L
Sbjct: 86 CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLL 145
Query: 606 N-NSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVVRDCLR 664
K L + + ++K IL +++ + + V + +
Sbjct: 146 VLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNK 205
Query: 665 RKRNRDPATWKLTSFHQLGFTESNILSS 692
T+ T +NI ++
Sbjct: 206 CSYFLSILAKLQTNPKLSNLTLNNIETT 233
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 8e-07
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 74 SVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQN 131
S+ + + ++ C K+L ++++SSN + F +++ LDL N
Sbjct: 375 SLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP---PRIKVLDLHSN 431
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFN 182
IP + ++ LQ +++ N +P I RL+ LQ ++L+ N ++
Sbjct: 432 KIKS-IPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 481
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 1e-30
Identities = 49/302 (16%), Positives = 98/302 (32%), Gaps = 41/302 (13%)
Query: 685 TESNILSSLTESNLIGSGGSGQV--YRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEI 742
E L+ L ++ + E + + +I
Sbjct: 53 REVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKI 112
Query: 743 EILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
+ N V S + + + ++L W++ R H LH
Sbjct: 113 RRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL----EDREHGVCLH 168
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE 862
+QIA + + ++H ++HRD+K SNI + K+ DFGL + + E
Sbjct: 169 I--FIQIA----EAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 219
Query: 863 PHTMSAVA----------GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 912
T+ G+ Y +PE + + K+DI+S G++L EL+
Sbjct: 220 EQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST--QM 277
Query: 913 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
E + + + ++ + + S P+ RP ++
Sbjct: 278 ERVRIIT--------------DVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323
Query: 973 LQ 974
++
Sbjct: 324 IE 325
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 45/229 (19%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G VY+ G+ VA+K++ + L+ E I EI I+ ++VK
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQ-EIIKEISIMQQCDSPHVVKY 89
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GA 813
+ +V EY S+ + R ++L T +IA
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL---------------TEDEIATILQST 134
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHT 865
+GL Y+H + IHRD+K+ NILL++E AK+ADFG+A L G P
Sbjct: 135 LKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFW 191
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
M APE N DI+S G+ +E+ G + Y D H
Sbjct: 192 M----------APEVIQEIGYNCVADIWSLGITAIEMAEG-KPPYADIH 229
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-30
Identities = 71/315 (22%), Positives = 116/315 (36%), Gaps = 68/315 (21%)
Query: 683 GFTESNILSSLTES----NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF 738
G+ S S +S + +G G G+V+++ G AVKR + K
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS-MSPFRGPKDRARK 103
Query: 739 IAEIEILGTI-RHANIVKLWCCISS--ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS 795
+AE+ + +H V+L + E L Y E L S
Sbjct: 104 LAEVGSHEKVGQHPCCVRL---EQAWEEGGIL--YLQTE--------------LCGPS-- 142
Query: 796 VHQHVLHWPTRL---QIAIGAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849
+ QH W L Q+ L ++H ++H DVK +NI L + K+
Sbjct: 143 LQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLG 199
Query: 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEY---AYTTKVNEKIDIYSFGVVLLELVTGK 906
DFGL L G G Y APE +Y T D++S G+ +LE+
Sbjct: 200 DFGLLVELGTAGAGEVQ---EGDPRYMAPELLQGSYGTAA----DVFSLGLTILEVACNM 252
Query: 907 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYR-LALICTSTLPSS 965
E +G E W+ L +G P + +++ R + ++ P
Sbjct: 253 ELPHGGE-------GWQQ----------LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKL 295
Query: 966 RPSMKEVLQ--ILRR 978
R + + +L +LR+
Sbjct: 296 RATAEALLALPVLRQ 310
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 71/303 (23%), Positives = 119/303 (39%), Gaps = 44/303 (14%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
L +G G G V R +G VAVK + + + +FI E+ + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
+ H N+++L+ + +V E SL L + + T
Sbjct: 78 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL------------GTLS 124
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+ A+ A+G+ Y+ + IHRD+ + N+LL + KI DFGL + L Q + H +
Sbjct: 125 RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVM 180
Query: 868 AVAGSFGY--FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ APE T + D + FGV L E+ T YG E W +
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-----YGQE-----PWIGLNG 230
Query: 926 AEEKPITDALDKG---IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980
++ I +DK + P C + +Y + + C + P RP+ + L
Sbjct: 231 SQ---ILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283
Query: 981 PTE 983
PT+
Sbjct: 284 PTD 286
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 127 bits (319), Expect = 3e-30
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+GG G V R GE VA+K+ ++L+ K + + EI+I+ + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 759 CISSENS------KLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
LL EY E L ++L L + +L I+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL---KEGPIRTLLS-----DIS 131
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMS 867
L Y+H + +IIHRD+K NI+L + KI D G AK L QGE +
Sbjct: 132 ----SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-DQGEL--CT 181
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE K +D +SFG + E +TG
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-30
Identities = 59/289 (20%), Positives = 101/289 (34%), Gaps = 56/289 (19%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
I GG G +Y +D N G V +K + ++ + + + +AE + L + H +IV++
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 757 WCCISSENSKL-----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+ + + +V EY+ QSL R + L + +
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---------------LPVAEAIAYLL 189
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
L Y+H +++ D+K NI+L E + K+ D G + G + G
Sbjct: 190 EILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG------YLYG 239
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ G+ APE T DIY+ G L L G E+ P+
Sbjct: 240 TPGFQAPEIV-RTGPTVATDIYTVGRTLAALTLDLPTRNGR--------YVDGLPEDDPV 290
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRC 979
D + RL P R + +E+ L
Sbjct: 291 LKTYD-------------SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 42/294 (14%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
S + +IGSG SG+V VA+K + Q+ ++F++E I+G
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQ 106
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NI++L ++ ++V EYMEN SLD +L +
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI------------MQLV 154
Query: 808 QIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS 867
+ G G+ Y+ +HRD+ + N+L+DS K++DFGL+++L + +
Sbjct: 155 GMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 868 AVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 922
G APE + D++SFGVV+ E++ E Y + + +
Sbjct: 212 TG----GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN--MTNRD--- 262
Query: 923 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ ++++G P + +++L L C + RP +++ +L
Sbjct: 263 --------VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-30
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G GG + + I E A K + + L ++ EI I ++ H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V E +SL RK + ++ L QI G
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKAL----TEPEARYYLR-----QIV----LGC 128
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYF 876
Y+H + ++IHRD+K N+ L+ + + KI DFGLA + GE + G+ Y
Sbjct: 129 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---CGTPNYI 182
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE + ++D++S G ++ L+ GK
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 59/305 (19%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILG 746
+ + ++GSG G VY+ I + VA+K + + K KE + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMA 72
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
++ + ++ +L + + L+ + M L ++ K ++ S
Sbjct: 73 SVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGS------------QYL 119
Query: 807 LQIAIGAAQGLCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
L + A+G+ Y ++HRD+ + N+L+ + KI DFGLAK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDRR------LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEK 172
Query: 864 HTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918
+ G A E + D++S+GV + EL+T +G +
Sbjct: 173 EYHA----EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT-----FGSK----- 218
Query: 919 EWAWRHYAEEKPITDALDKG--IAEP--CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ +E I+ L+KG + +P C ++ VY + C SRP +E++
Sbjct: 219 PYDGIPASE---ISSILEKGERLPQPPICTID----VYMIMRKCWMIDADSRPKFRELII 271
Query: 975 ILRRC 979
+
Sbjct: 272 EFSKM 276
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 5e-30
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 55/311 (17%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+ +G G G+V+ + VAVK + + K+F E E+L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAELL 71
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQHVLH 802
++H +IVK + + ++V+EYM++ L+++L LV G + L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 803 WPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML--- 857
L IA A G+ Y+ H +HRD+ + N L+ + KI DFG+++ +
Sbjct: 132 LSQMLHIASQIASGMVYLASQH-----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 858 ---AKQGEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEA 908
G PE K + D++SFGV+L E+ T GK+
Sbjct: 187 DYYRVGGH-----------TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 909 NYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS 968
+ +T + E + E+P C E VY + L C P R +
Sbjct: 236 WFQLSNTEVIECITQGRVLERP----------RVCPKE----VYDVMLGCWQREPQQRLN 281
Query: 969 MKEVLQILRRC 979
+KE+ +IL
Sbjct: 282 IKEIYKILHAL 292
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 5e-30
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 38/288 (13%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G G G+V+ NG VA+K + K + F+ E +++ +RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL----KPGTMSPEAFLQEAQVMKKLRH 321
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ +S E +V EYM SL +L G L P + +A
Sbjct: 322 EKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETG-----------KYLRLPQLVDMA 369
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A G+ Y+ +HRD++++NIL+ K+ADFGLA+++ + +
Sbjct: 370 AQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQG 423
Query: 871 GSFGYF--APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
F APE A + K D++SFG++L EL T Y E
Sbjct: 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--MVNRE--------- 472
Query: 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ D +++G PC E +++ L C P RP+ + + L
Sbjct: 473 --VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 6e-30
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 48/300 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ + +IG G G VY +D +G AVK + NR + +F+ E I+
Sbjct: 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKD 82
Query: 748 IRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H N++ L C+ SE S L+V YM++ L ++ + +V +
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLI------ 131
Query: 807 LQIAIGAAQGLCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
+ A+G+ Y +HRD+ + N +LD +F K+ADFGLA+ + +
Sbjct: 132 -GFGLQVAKGMKYLASKK------FVHRDLAARNCMLDEKFTVKVADFGLARDMY---DK 181
Query: 864 HTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918
S + A E T K K D++SFGV+L EL+T Y
Sbjct: 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-------- 233
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ IT L +G +Y + L C RPS E++ +
Sbjct: 234 ---PDVNTFD--ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-30
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 36/225 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G + V+R G+ A+K NN + ++ + E E+L + H NIVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF-NNISFLRPVDVQM-REFEVLKKLNHKNIVKLF 73
Query: 758 CCISSENSKL--LVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
++ L+ E+ SL L L S VL +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL---PESEFLIVLR-----DV---- 121
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILL----DSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
G+ ++ + I+HR++K NI+ D + K+ DFG A+ L + ++
Sbjct: 122 VGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSL 175
Query: 870 AGSFGYFAPE--------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y P+ + K +D++S GV TG
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 6e-30
Identities = 72/300 (24%), Positives = 118/300 (39%), Gaps = 48/300 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ + +IG G G VY +D +G AVK + NR + +F+ E I+
Sbjct: 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKD 146
Query: 748 IRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H N++ L C+ SE S L+V YM++ L ++ + +V +
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLI------ 195
Query: 807 LQIAIGAAQGLCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
+ A+G+ + +HRD+ + N +LD +F K+ADFGLA+ + +
Sbjct: 196 -GFGLQVAKGMKFLASKK------FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248
Query: 864 HTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 918
S + A E T K K D++SFGV+L EL+T Y
Sbjct: 249 ---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-------- 297
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ IT L +G +Y + L C RPS E++ +
Sbjct: 298 ---PDVNTFD--ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 8e-30
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
S LT IGSG G V+ + VA+K I + E++FI E E++ + H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTI----REGAMSEEDFIEEAEVMMKLSH 62
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ + LV E+ME+ L +L ++ + T L +
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA------------ETLLGMC 110
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ +G+ Y+ +IHRD+ + N L+ K++DFG+ + + ++
Sbjct: 111 LDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSST 163
Query: 871 GSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
G F +PE ++ + K D++SFGV++ E+ + + Y + S +E
Sbjct: 164 G--TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSE------ 213
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + + G T VY++ C P RP+ +L+ L
Sbjct: 214 -----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 8e-30
Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 48/297 (16%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
++++ ++G+G G+V + + VA+K + Q+ ++F+ E I+G
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQ 102
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H NI++L ++ ++V EYMEN SLD +L +
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FTVIQLV 150
Query: 808 QIAIGAAQGLCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+ G A G+ Y M +HRD+ + NIL++S K++DFGL ++L E
Sbjct: 151 GMLRGIASGMKYLSDMG------YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE-- 202
Query: 865 TMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
+A G +PE K D++S+G+VL E+++ E Y + S +
Sbjct: 203 --AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--MSNQD 258
Query: 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ A+D+G P ++ +Y+L L C ++RP ++++ IL
Sbjct: 259 -----------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 9e-30
Identities = 64/312 (20%), Positives = 125/312 (40%), Gaps = 52/312 (16%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
+ + +G+G G V+++ +G +A K I + ++ + + I E+++L
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV + S+ + E+M+ SLD+ L R + + +L +++I
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILG-----KVSIA 139
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA-VAG 871
+GL Y+ +I+HRDVK SNIL++S + K+ DFG++ L +M+ G
Sbjct: 140 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVG 192
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ Y +PE T + + DI+S G+ L+E+ G+ + L +
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALI-----------------------------CTSTL 962
T + P M + +A+ C
Sbjct: 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 312
Query: 963 PSSRPSMKEVLQ 974
P+ R +K+++
Sbjct: 313 PAERADLKQLMV 324
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-29
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 47/228 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLW 757
IG G SG VY G+ VA++++ L Q+ +KE I EI ++ ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAA 814
+ +V EY+ SL + V + + QIA
Sbjct: 84 DSYLVGDELWVVMEYLAGGSL--------------TDVVTETCM---DEGQIAAVCRECL 126
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHTM 866
Q L ++H + Q+IHRD+KS NILL + K+ DFG + + G P+ M
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 183
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
APE K+DI+S G++ +E++ G E Y +E+
Sbjct: 184 ----------APEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNEN 220
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-29
Identities = 81/306 (26%), Positives = 121/306 (39%), Gaps = 47/306 (15%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
+ + ++IG G GQV + I G A+KR+ ++ ++F E+E+L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKL 82
Query: 749 -RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQ---HVLHWP 804
H NI+ L L EY + +L +L + + ++ L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
L A A+G M + Q IHRD+ + NIL+ + AKIADFGL++
Sbjct: 143 QLLHFAADVARG---MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--------G 191
Query: 865 TMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914
V + G A E YTT D++S+GV+L E+V+ G G
Sbjct: 192 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNS----DVWSYGVLLWEIVSLGGTPYCGMTC 247
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
L E + Y EKP C E VY L C P RPS ++L
Sbjct: 248 AELYEKLPQGYRLEKP----------LNCDDE----VYDLMRQCWREKPYERPSFAQILV 293
Query: 975 ILRRCC 980
L R
Sbjct: 294 SLNRML 299
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-29
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G+V++ N + VA+K I + + ++E + EI +L + K +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYG 87
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL---QIAI---G 812
+ ++ EY+ S +L P L QIA
Sbjct: 88 SYLKDTKLWIIMEYLGGGSA-------------------LDLLE-PGPLDETQIATILRE 127
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPH 864
+GL Y+H + + IHRD+K++N+LL + K+ADFG+A L G P
Sbjct: 128 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 184
Query: 865 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
M APE + + K DI+S G+ +EL G E + + H
Sbjct: 185 WM----------APEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELH 223
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 1e-29
Identities = 51/235 (21%), Positives = 83/235 (35%), Gaps = 45/235 (19%)
Query: 699 IGSGGS--GQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G V GE+V V+RI N + ++ E+ + H NIV
Sbjct: 33 IGKGFEDLMTVNLARYKPTGEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL---QIAI-- 811
++N +V +M S + L+ H+ + IA
Sbjct: 92 RATFIADNELWVVTSFMAYGSA--------KDLIC---------THFMDGMNELAIAYIL 134
Query: 812 -GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGE-PHTMSAV 869
G + L Y+HH +HR VK+S+IL+ + K ++ + G+ +
Sbjct: 135 QGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF 191
Query: 870 AGSF-G---YFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ +PE Y + K DIYS G+ EL G + D
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGY----DAKSDIYSVGITACELANG-HVPFKDMP 241
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-29
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G GG + + I E A K + + L ++ EI I ++ H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +V E +SL RK + ++ L QI G
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKAL----TEPEARYYLR-----QIV----LGC 154
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYF 876
Y+H + ++IHRD+K N+ L+ + + KI DFGLA + GE + G+ Y
Sbjct: 155 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---CGTPNYI 208
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE + ++D++S G ++ L+ GK
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 44/299 (14%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
LT +G+G G V G + VA+K I K E EFI E +++ + H
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMI----KEGSMSEDEFIEEAKVMMNLSH 78
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ + + ++ EYM N L +L +H L++
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE------------MRHRFQTQQLLEMC 126
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ Q +HRD+ + N L++ + K++DFGL++ + ++
Sbjct: 127 KDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSV 179
Query: 871 GSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
G F PE +K + K DI++FGV++ E+ + + Y + +E
Sbjct: 180 G--SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSE------ 229
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTEN 984
+ + +G+ VY + C RP+ K +L + E+
Sbjct: 230 -----TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 42/303 (13%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
S++ +G G+VY+ + VA+K + K L +EF E +
Sbjct: 9 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLR 66
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQHVLH 802
++H N+V L ++ + +++ Y + L +L R + + L
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 803 WPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
P + + A G+ Y+ HH ++H+D+ + N+L+ + KI+D GL + +
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 861 GEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914
APE K + DI+S+GVVL E+ + G + G +
Sbjct: 182 DY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 236
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ E P + C VY L + C + PS RP K++
Sbjct: 237 QDVVEMIRNRQVLPCP----------DDC----PAWVYALMIECWNEFPSRRPRFKDIHS 282
Query: 975 ILR 977
LR
Sbjct: 283 RLR 285
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-29
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 56/297 (18%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G+G G+V+ N + VAVK + K + F+AE ++ T++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTM----KPGSMSVEAFLAEANVMKTLQH 242
Query: 751 ANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+VKL ++ ++ E+M SL +L + S P +
Sbjct: 243 DKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGS-----------KQPLPKLIDF 289
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+ A+G+ ++ IHRD++++NIL+ + KIADFGLA+++ E + +A
Sbjct: 290 SAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYTAR 342
Query: 870 AGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
G F APE K D++SFG++L+E+VT Y S E
Sbjct: 343 EG--AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG--MSNPE----- 393
Query: 925 YAEEKPITDALDKGIAEPCY-LEEM----TTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ AL++G Y + +Y + + C P RP+ + + +L
Sbjct: 394 ------VIRALERG-----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G VY + +A+K ++ + +E + E+EI +RH NI++L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ L+ EY ++ R L + +++ ++A
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---------ELA----NA 121
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y H ++IHRD+K N+LL S + KIADFG + A + G+ Y
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDL---CGTLDYL 174
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE +EK+D++S GV+ E + GK
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 3e-29
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+L +G+G G+V+ NG + VAVK + K F+AE ++ ++H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSL----KQGSMSPDAFLAEANLMKQLQH 67
Query: 751 ANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+V+L+ ++ ++ EYMEN SL +L L L +
Sbjct: 68 QRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDM 114
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A A+G+ ++ IHRD++++NIL+ KIADFGLA+++ E + +A
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEYTAR 167
Query: 870 AGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
G F APE K D++SFG++L E+VT Y + E
Sbjct: 168 EG--AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--MTNPE----- 218
Query: 925 YAEEKPITDALDKGIAEPCY-LEEM----TTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ L++G Y + +Y+L +C P RP+ + +L
Sbjct: 219 ------VIQNLERG-----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-29
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 41/257 (15%)
Query: 663 LRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVK 722
++ R++D + + S T++ +IG+G G VY+ + +GE VA+K
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 85
Query: 723 RIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLWCCISSENSKL------LVYEYMEN 775
++ +K F E++I+ + H NIV+L S K LV +Y+
Sbjct: 86 KV--------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP- 136
Query: 776 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 835
+++ R R+ + + ++ Q+ + L Y+H + I HRD+K
Sbjct: 137 ETVYRVARHYSRAKQTLPVIYVKLYMY-----QLF----RSLAYIH---SFGICHRDIKP 184
Query: 836 SNILLDSE-FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEK 889
N+LLD + K+ DFG AK L + GEP+ S + S Y APE YT+
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVR-GEPNV-SYIC-SRYYRAPELIFGATDYTS----S 237
Query: 890 IDIYSFGVVLLELVTGK 906
ID++S G VL EL+ G+
Sbjct: 238 IDVWSAGCVLAELLLGQ 254
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-29
Identities = 62/300 (20%), Positives = 115/300 (38%), Gaps = 48/300 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+IG G G VY ID A+K + +R + + F+ E ++
Sbjct: 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRG 78
Query: 748 IRHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+ H N++ L + E ++ YM + L +++ +R+
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV------------KDL 126
Query: 807 LQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+ + A+G+ Y+ +HRD+ + N +LD F K+ADFGLA+ + +
Sbjct: 127 ISFGLQVARGMEYLAEQK-----FVHRDLAARNCMLDESFTVKVADFGLARDIL---DRE 178
Query: 865 TMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 918
S A E T + K D++SFGV+L EL+T G + L
Sbjct: 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT 238
Query: 919 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + +P E C +Y++ C P+ RP+ + ++ + +
Sbjct: 239 HFLAQGRRLPQP----------EYCPDS----LYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-29
Identities = 82/339 (24%), Positives = 145/339 (42%), Gaps = 74/339 (21%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILG 746
S +T +IG+G G+VY+ +G E VA+K + Q+ +F+ E I+G
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR--VDFLGEAGIMG 101
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H NI++L IS +++ EYMEN +LD++L +
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE------------FSVLQL 149
Query: 807 LQIAIGAAQGLCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
+ + G A G+ Y M++ +HRD+ + NIL++S K++DFGL+++L E
Sbjct: 150 VGMLRGIAAGMKYLANMNY------VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203
Query: 864 HTMSAVAGSFGYF-----APEYA----YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ S G APE +T+ D++SFG+V+ E++T YG
Sbjct: 204 TYTT----SGGKIPIRWTAPEAISYRKFTSAS----DVWSFGIVMWEVMT-----YG--- 247
Query: 915 TSLAEWAWRHYAEEKP--------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR 966
E+P + A++ G P ++ + +Y+L + C + R
Sbjct: 248 -------------ERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARR 294
Query: 967 PSMKEVLQILRRCC-PTENYGGKKMGRDVDSAPLLGTAG 1004
P +++ IL + ++ S L T+G
Sbjct: 295 PKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTSG 333
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-29
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 58/296 (19%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
L IG G G V D G VAVK I K + + F+AE ++ +RH
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCI----KNDAT-AQAFLAEASVMTQLRH 245
Query: 751 ANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+N+V+L + + +V EYM SL +L R R VL L+
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----------SVLGGDCLLKF 294
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
++ + + Y+ + +HRD+ + N+L+ + AK++DFGL K +
Sbjct: 295 SLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---------- 341
Query: 870 AGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
G APE K + K D++SFG++L E+ + Y R
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-----------PRI 390
Query: 925 YAEEKPITDALDKG----IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
++ + ++KG + C VY + C ++RP+ ++ + L
Sbjct: 391 PLKD--VVPRVEKGYKMDAPDGCPPA----VYDVMKNCWHLDAATRPTFLQLREQL 440
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 60/306 (19%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
L IG G G V D G VAVK I N+ + F+AE ++ +RH
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND-----ATAQAFLAEASVMTQLRH 73
Query: 751 ANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+N+V+L + + +V EYM SL +L R R VL L+
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----------SVLGGDCLLKF 122
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
++ + + Y+ + +HRD+ + N+L+ + AK++DFGL K +
Sbjct: 123 SLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---------- 169
Query: 870 AGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
G APE K + K D++SFG++L E+ + Y R
Sbjct: 170 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-----------PRI 218
Query: 925 YAEEKPITDALDKGIAEPCY-LEEM----TTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
++ + ++KG Y ++ VY + C + RPS ++ + L
Sbjct: 219 PLKD--VVPRVEKG-----YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
Query: 980 CPTENY 985
E +
Sbjct: 272 KTHELH 277
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 6e-29
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 40/226 (17%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G G VY E VA+K++ + K + + ++ I E+ L +RH N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAAQ 815
C E++ LV EY + D L K+ L ++IA GA Q
Sbjct: 122 CYLREHTAWLVMEYCLGSASD-LLEVHKKPL---------------QEVEIAAVTHGALQ 165
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ----GEPHTMSAVAG 871
GL Y+H +IHRDVK+ NILL K+ DFG A ++A G P+ M
Sbjct: 166 GLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWM----- 217
Query: 872 SFGYFAPEYAYTTKV---NEKIDIYSFGVVLLELVTGKEANYGDEH 914
APE + K+D++S G+ +EL + + +
Sbjct: 218 -----APEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMN 257
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 8e-29
Identities = 70/473 (14%), Positives = 142/473 (30%), Gaps = 88/473 (18%)
Query: 148 QCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFK 207
+ S +L+ L +L + + T I L+ L L N+
Sbjct: 22 SEVAAAFEM-QATDTISEEQLATLTSLDCHNSSI--TDMTGIEKLTGLTKLICTSNN--- 75
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLN 267
+ ++ L L N + + ++ L+ L L + N L S
Sbjct: 76 --ITTLDLSQNTNLTYLACDS-NKLTNLD--VTPLTKLTYLNCDTNKLTKLDVSQN---P 127
Query: 268 NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
LT L N L+ EI S +LT++D +N + L L N ++
Sbjct: 128 LLTYLNCARNTLT-EIDVS-HNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT 183
Query: 328 GEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387
+ + L + N+++ + ++ + L + S+N+ +
Sbjct: 184 EL---DVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT------------ 225
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
+ + L N + EL + L++L
Sbjct: 226 ---------EID------VTPLTQLTYFDCSVNPLT-ELDVSTLS--KLTTLHCIQT--- 264
Query: 448 GELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507
+L +++++N LI F+A E+ ++T + L
Sbjct: 265 ---------DLLEIDLTHN-------------TQLIYFQAEGCRKIKEL--DVTHNTQLY 300
Query: 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 567
L ++ +L + L L L EL+ E+ + + SL +
Sbjct: 301 LLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ-D 353
Query: 568 IPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLP 620
LN + + + N + + + NP+ P
Sbjct: 354 FSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEP 406
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-26
Identities = 79/517 (15%), Positives = 167/517 (32%), Gaps = 100/517 (19%)
Query: 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156
N + ++ + L +LD + + I++++GL + NN
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNN 75
Query: 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFG 216
+ + + + + L L N+ ++ L+ L L N + ++
Sbjct: 76 IT-TLD--LSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNK-----LTKLDVS 124
Query: 217 MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD 276
L L N + EI +S+ + L L + N + + LT L
Sbjct: 125 QNPLLTYLNCAR-NTLTEID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSF 179
Query: 277 NILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGK 336
N K+T++D+S + K L L +N+++ + +
Sbjct: 180 N-------------KITELDVS-------------QNKLLNRLNCDTNNITK---LDLNQ 210
Query: 337 IPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFEN 396
L +N L+ + ++ + L F+ S N + L + + L + +
Sbjct: 211 NIQLTFLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLT-ELDVSTLSK--LTTLHCIQT 264
Query: 397 NLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW 456
+L L + L Q R EL T L L
Sbjct: 265 DLLE---IDLTHNTQLIYFQAEGCRKIKELDVTHNT--QLYLLDCQAA------------ 307
Query: 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKL 516
+T L++S N L+ +N + E+ ++ + L +L +
Sbjct: 308 GITELDLSQN-------------PKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHI 351
Query: 517 SGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVS-----LDLSGNQFSGEIPPE 571
S + +LNN A + + + + + ++ LD GN +
Sbjct: 352 Q-DFSS-VGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMN------ 403
Query: 572 IGQLKLNTFNLSSNKL-YGNIPDEFNNLAYDDSFLNN 607
I ++ ++N + + N+ + + Y + N
Sbjct: 404 IEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENG 440
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 8e-25
Identities = 76/463 (16%), Positives = 137/463 (29%), Gaps = 75/463 (16%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
++T + + IT + I L LT + +SN+I L T L L N
Sbjct: 41 LATLTSLDCHNSSIT-DMTGI-EKLTGLTKLICTSNNI-TTLD--LSQNTNLTYLACDSN 95
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
D+ ++ L ++ N + + + L L N ++
Sbjct: 96 KLTNL---DVTPLTKLTYLNCDTNKLTKL---DVSQNPLLTYLNCARNTLTEI---DVSH 146
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
+ L L N ++ +L TL + N I E+ +S L L +
Sbjct: 147 NTQLTELDCHLNKKIT----KLDVTPQTQLTTLDCSF-NKITELD--VSQNKLLNRLNCD 199
Query: 252 GNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFG 311
N++ + L LT L N L+ EI + +LT D S+N LT +
Sbjct: 200 TNNIT-KLD--LNQNIQLTFLDCSSNKLT-EIDVT-PLTQLTYFDCSVNPLT-ELD--VS 251
Query: 312 KLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVST 371
L L L L E+ + L F+ L ++ ++ L +
Sbjct: 252 TLSKLTTLHCIQTDLL-EIDLT--HNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQA 306
Query: 372 NQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLW 431
+ L L + L + + EL
Sbjct: 307 AGIT---------------------------ELDLSQNPKLVYLYLNNTELT-ELDVSHN 338
Query: 432 TTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNL 491
T L SL + I L + + + +NN
Sbjct: 339 T--KLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQTI-----------TMPKETLTNNS 385
Query: 492 FSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLN 534
+ + +L + G+ + ++W +L+ N
Sbjct: 386 LTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDN 428
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 7e-14
Identities = 60/363 (16%), Positives = 111/363 (30%), Gaps = 68/363 (18%)
Query: 263 LFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGL 321
F +N + S E L LT +D +++T + KL L L
Sbjct: 14 WFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLIC 71
Query: 322 FSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPEN 381
SN+++ + + L +N L+ + ++ + L TN+ +
Sbjct: 72 TSNNITT---LDLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLT------ 119
Query: 382 LCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLML 441
+ L + N + E+ T L+ L
Sbjct: 120 ---------------------KLDVSQNPLLTYLNCARNTLT-EIDVSHNT--QLTELDC 155
Query: 442 SDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELT 501
N +L LT L+ S N+ + ++ V K L N + ++L
Sbjct: 156 HLNKKITKLDVTPQTQLTTLDCSFNKIT-ELD--VSQNKLLNRLNCDTNNITK---LDLN 209
Query: 502 SLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSG 561
L L NKL+ ++ + T L + + N L+ E+ + +L + +L
Sbjct: 210 QNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQ 263
Query: 562 NQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNL----CVKNPII 617
L +L+ N E + +N+ L C I
Sbjct: 264 TD-------------LLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT 310
Query: 618 NLP 620
L
Sbjct: 311 ELD 313
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-28
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 54/311 (17%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+ +G G G+V+ + VAVK + ++ ++ ++F E E+L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELL 97
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL--HGRKRSLVSGSSSVHQHVLHW 803
++H +IV+ + + L+V+EYM + L+R+L HG L++G V L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 804 PTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML---- 857
L +A A G+ Y+ H +HRD+ + N L+ KI DFG+++ +
Sbjct: 158 GQLLAVASQVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 858 --AKQGEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEAN 909
G PE K + D++SFGVVL E+ T GK+
Sbjct: 213 YYRVGGR-----------TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
Y +T + + E+P C VY + C P R S+
Sbjct: 262 YQLSNTEAIDCITQGRELERP----------RAC----PPEVYAIMRGCWQREPQQRHSI 307
Query: 970 KEVLQILRRCC 980
K+V L+
Sbjct: 308 KDVHARLQALA 318
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 44/291 (15%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
+T +GSG G V G + VAVK I K E EF E + + + H
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYD-VAVKMI----KEGSMSEDEFFQEAQTMMKLSH 62
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+VK + S E +V EY+ N L +L + L L++
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG------------LEPSQLLEMC 110
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+G+ ++ Q IHRD+ + N L+D + K++DFG+ + + +
Sbjct: 111 YDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQYVSSV 163
Query: 871 GSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
G F APE + K + K D+++FG+++ E+ + + Y + +E
Sbjct: 164 G--TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL--YTNSE------ 213
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + +G T+Y++ C LP RP+ +++L +
Sbjct: 214 -----VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 62/309 (20%), Positives = 117/309 (37%), Gaps = 48/309 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ L ++G G G V +G VAVK + +Q+ +EF++E +
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKD 92
Query: 748 IRHANIVKLW-CCISSE----NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
H N+++L CI +++ +M+ L +L L +G + L
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL--LYSRLETGPKHIPLQTL- 149
Query: 803 WPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L+ + A G+ Y+ + +HRD+ + N +L + +ADFGL+K +
Sbjct: 150 ----LKFMVDIALGMEYLSNRN-----FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200
Query: 861 GEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914
G A E K D+++FGV + E+ T G G ++
Sbjct: 201 DY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN 255
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ ++ + ++P E C + +Y + C T P RP+ +
Sbjct: 256 HEMYDYLLHGHRLKQP----------EDC----LDELYEIMYSCWRTDPLDRPTFSVLRL 301
Query: 975 ILRRCCPTE 983
L + +
Sbjct: 302 QLEKLLESL 310
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 58/296 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G V + + VA+K + + +E + E +I+ + + IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 75
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + +LV E L ++L G++ + ++ + G
Sbjct: 76 IG-VCQAEALMLVMEMAGGGPLHKFLVGKREEI------------PVSNVAELLHQVSMG 122
Query: 817 LCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ Y + +HRD+ + N+LL + AKI+DFGL+K L + + + AG +
Sbjct: 123 MKYLEEKN------FVHRDLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKW 175
Query: 874 GYF--APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP- 930
APE K + + D++S+GV + E ++ YG +KP
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALS-----YG----------------QKPY 214
Query: 931 -------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ +++G C E +Y L C RP V Q +R C
Sbjct: 215 KKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 65/305 (21%), Positives = 121/305 (39%), Gaps = 61/305 (20%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILG 746
+ L + ++GSG G V++ I + + V +K I K ++ + + +G
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIG 70
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
++ HA+IV+L S LV +Y+ SL + + +L
Sbjct: 71 SLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGP------------QLL 117
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
L + A+G+ Y+ ++HR++ + N+LL S + ++ADFG+A +L +
Sbjct: 118 LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK---- 170
Query: 867 SAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
+ S A E + K + D++S+GV + EL+T +G
Sbjct: 171 -QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT-----FG---------- 214
Query: 922 WRHYAEEKP--------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
+P + D L+KG VY + + C + RP+ KE+
Sbjct: 215 ------AEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELA 268
Query: 974 QILRR 978
R
Sbjct: 269 NEFTR 273
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 47/228 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-AEIEILGTIRHANIVKLW 757
IG G +G V +G VAVK + L ++ +E + E+ I+ +H N+V+++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM----DLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAA 814
++ E+++ +L + V Q L QIA
Sbjct: 109 KSYLVGEELWVLMEFLQGGAL--------------TDIVSQVRL---NEEQIATVCEAVL 151
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHTM 866
Q L Y+H +IHRD+KS +ILL + + K++DFG ++K G P+ M
Sbjct: 152 QALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWM 208
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
APE + ++DI+S G++++E+V G E Y +
Sbjct: 209 ----------APEVISRSLYATEVDIWSLGIMVIEMVDG-EPPYFSDS 245
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 50/233 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-FIAEIEILGTIRHANIVKLW 757
+G G G+VY+ G A K I + + E E +I EIEIL T H IVKL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI---GAA 814
+ ++ E+ ++D + R L T QI +
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL---------------TEPQIQVVCRQML 127
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ--------GEPHTM 866
+ L ++H +IIHRD+K+ N+L+ E ++ADFG++ K G P+ M
Sbjct: 128 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 867 SAVAGSFGYFAPEYAYTTKV-----NEKIDIYSFGVVLLELVTGKEANYGDEH 914
APE + + K DI+S G+ L+E+ E + + +
Sbjct: 185 ----------APEVVMCETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELN 226
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 3e-28
Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 26/310 (8%)
Query: 71 TFNSVTGISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
T N+ ++ ++ + K+P ++ + + ++L+ I +Q L +
Sbjct: 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMG 101
Query: 130 QNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFNGTFPK 187
N +P + + L + L N+ S +PR I +L TL + N
Sbjct: 102 FNAIRY-LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIED 158
Query: 188 EI-GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
+ ++L+ L L+ N + ++ ++ L ++ NL+ + ++E
Sbjct: 159 DTFQATTSLQNLQLSSNR-----LTHVDLSLIPSLFHANVSY-NLLSTLA----IPIAVE 208
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI 306
L + N + + + LT L L N L+ + + L ++DLS N L I
Sbjct: 209 ELDASHNSIN-VVRGPVN--VELTILKLQHNNLT-DTAWLLNYPGLVEVDLSYNELE-KI 263
Query: 307 PEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALE 365
F K++ L+ L + +N L + IP LK + +N L + LE
Sbjct: 264 MYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLE 321
Query: 366 GFEVSTNQFS 375
+ N
Sbjct: 322 NLYLDHNSIV 331
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-27
Identities = 62/354 (17%), Positives = 121/354 (34%), Gaps = 52/354 (14%)
Query: 241 NLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDL 297
L++ +I+ + + +P+ L + L L D + EI + A + + +
Sbjct: 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYM 100
Query: 298 SMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSLSGVLP 355
N + +P F + L +L L N LS +P I P L + NN+L +
Sbjct: 101 GFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIE 157
Query: 356 PEIGLH-SALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRT 414
+ ++L+ ++S+N+ + + L +L
Sbjct: 158 DDTFQATTSLQNLQLSSNRLTH-VD--------------------------LSLIPSLFH 190
Query: 415 VQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQR 474
+ N + L + L S N+I+ + LT L++ +N +
Sbjct: 191 ANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPVNVELTILKLQHNNLT-DTA- 242
Query: 475 GVGSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 533
+ ++ L+ S N +I + L L + N+L L +L L
Sbjct: 243 WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVL 300
Query: 534 NLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
+L+ N L + + + +L L N + L LS N
Sbjct: 301 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHH-TLKNLTLSHNDW 351
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-26
Identities = 59/372 (15%), Positives = 121/372 (32%), Gaps = 31/372 (8%)
Query: 103 DLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIP 162
I ++ + + ++ + + +
Sbjct: 7 QPEYKCIDSNLQYDCV----FYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPA 62
Query: 163 RSIGRLSELQTLYLYMNEFNGTFPKEI-GDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKK 220
+ +++ L L + ++ L + +N +P F +
Sbjct: 63 ALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFN---AIRYLPPHVFQNVPL 118
Query: 221 LKTLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNI 278
L L + E N + +P + N L L+++ N+LE I F +L L L N
Sbjct: 119 LTVLVL-ERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNR 176
Query: 279 LSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIP 338
L+ + S+ L ++S N L+ ++ L N ++ V +
Sbjct: 177 LT-HVDLSLIP-SLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NV 226
Query: 339 ALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGVVAFENN 397
L K+ +N+L+ + + L ++S N+ + + L+ + N
Sbjct: 227 ELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNR 283
Query: 398 LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWN 457
L A+ TL+ + L N + L +L L N+I L T
Sbjct: 284 LV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 340
Query: 458 LTRLEISNNRFS 469
L L +S+N +
Sbjct: 341 LKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 58/341 (17%), Positives = 118/341 (34%), Gaps = 23/341 (6%)
Query: 265 LLNNLTQLFLYDNILSGEIPSSVEAL---KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGL 321
L + ++ ++ + ++ E + + + + + ++LL L
Sbjct: 17 LQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76
Query: 322 FSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLH-SALEGFEVSTNQFSGPLPE 380
+ + ++K + N++ LPP + + L + N S LP
Sbjct: 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSS-LPR 134
Query: 381 NLCAG-GVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSL 439
+ L + NNL + +L+ +QL SNR + + L +L
Sbjct: 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIP--SLFHA 191
Query: 440 MLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVE 499
+S N +S L + L+ S+N + ++ V L + K +N + +
Sbjct: 192 NVSYNLLS-TLAIPI--AVEELDASHNSIN-VVRGPVNV--ELTILKLQHNNLT-DTAW- 243
Query: 500 LTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDL 559
L + L + L N+L + V L L ++ N L + + + LDL
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDL 302
Query: 560 SGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIP-DEFNNL 598
S N + Q +L L N + + + L
Sbjct: 303 SHNHLL-HVERNQPQFDRLENLYLDHNSI-VTLKLSTHHTL 341
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-18
Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 21/207 (10%)
Query: 96 LKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155
+ +L ++S N + L ++ LD S N + + L + L N
Sbjct: 185 IPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHN 236
Query: 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEF 215
N + D + L + L NE + LE L ++ N + + +
Sbjct: 237 NLT-DTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN---RLVALNLYG 291
Query: 216 GMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLY 275
+ LK L + N + + LE L L+ N + + + L L L
Sbjct: 292 QPIPTLKVLDL-SHNHLLHVERNQPQFDRLENLYLDHNSIV-TLKLSTH--HTLKNLTLS 347
Query: 276 DNILSG----EIPSSVEALKLTDIDLS 298
N + +V + D D
Sbjct: 348 HNDWDCNSLRALFRNVARPAVDDADQH 374
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 9e-06
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 7/107 (6%)
Query: 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVG 135
+ + + + + + L +DLS N + +L+NL L N V
Sbjct: 275 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIV- 331
Query: 136 PIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182
+ L+ + L N++ + R++ + + + +
Sbjct: 332 TLKLST--HHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQH 374
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 71/325 (21%), Positives = 115/325 (35%), Gaps = 50/325 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
++T +G G G+VY + VAVK + +++ E +F+ E I+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALII 87
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
H NIV+ + ++ E M L +L + SS L
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS------LAMLD 141
Query: 806 RLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSE---FKAKIADFGLAKMLAKQ 860
L +A A G Y+ +H IHRD+ + N LL AKI DFG+A+ + +
Sbjct: 142 LLHVARDIACGCQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 861 GEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914
G PE K D +SFGV+L E+ + G +
Sbjct: 197 SY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ E+ + P + C VYR+ C P RP+ +L+
Sbjct: 252 QEVLEFVTSGGRMDPP----------KNCPGP----VYRIMTQCWQHQPEDRPNFAIILE 297
Query: 975 ILRRCCPTENYGGKKMGRDVDSAPL 999
+ C + ++ PL
Sbjct: 298 RIEYCTQDPDV--INTALPIEYGPL 320
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-28
Identities = 64/327 (19%), Positives = 118/327 (36%), Gaps = 79/327 (24%)
Query: 686 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
E ++ + + ++G G SG V G VAVKR+ E I++L
Sbjct: 10 EQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRM--LIDFCDIALME----IKLL 62
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
H N+++ +C +++ + E +L + + S + +
Sbjct: 63 TESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESK------NVSDENLKLQKEY 115
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-------------FKAKIADF 851
+ + A G+ ++H +IIHRD+K NIL+ + + I+DF
Sbjct: 116 NPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 852 GLAKMLA--KQGEPHTMSAVAGSFGYFAPE-------YAYTTKVNEKIDIYSFGVVLLEL 902
GL K L + ++ +G+ G+ APE ++ IDI+S G V +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 903 VTGKEANYGDEHT-------------SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMT 949
++ + +GD+++ + R E A D
Sbjct: 233 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE-----ATD------------- 274
Query: 950 TVYRLALI--CTSTLPSSRPSMKEVLQ 974
LI P RP+ +VL+
Sbjct: 275 ------LISQMIDHDPLKRPTAMKVLR 295
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 5e-28
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 53/312 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIE 743
LT +G G GQV ID + E VAVK + +K + ++E+E
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEME 138
Query: 744 ILGTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQH 799
++ I +H NI+ L + + ++ EY +L +L R+ + V +
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 800 VLHWPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 857
+ + + A+G+ Y+ IHRD+ + N+L+ KIADFGLA+ +
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 858 AKQGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKE 907
+ G APE YT + D++SFGV++ E+ T G
Sbjct: 254 NNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQS----DVWSFGVLMWEIFTLGGS 304
Query: 908 ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP 967
G L + + +KP C E +Y + C +PS RP
Sbjct: 305 PYPGIPVEELFKLLKEGHRMDKP----------ANCTNE----LYMMMRDCWHAVPSQRP 350
Query: 968 SMKEVLQILRRC 979
+ K++++ L R
Sbjct: 351 TFKQLVEDLDRI 362
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-28
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 64/299 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+GSG G V + VAVK + N + L+ E +AE ++ + + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+E S +LV E E L+++L + + +++ + G
Sbjct: 84 IGICEAE-SWMLVMEMAELGPLNKYLQQNRH-------------VKDKNIIELVHQVSMG 129
Query: 817 LCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ Y + +HRD+ + N+LL ++ AKI+DFGL+K L + +
Sbjct: 130 MKYLEESN------FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----TH 179
Query: 874 GYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
G + APE K + K D++SFGV++ E + YG +
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS-----YG----------------Q 218
Query: 929 KP--------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
KP +T L+KG C +Y L +C + +RP V LR
Sbjct: 219 KPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 8e-28
Identities = 66/318 (20%), Positives = 120/318 (37%), Gaps = 51/318 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+ L+ +G+G G+V + + VAVK + + + ++E+++L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVL 80
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLV-----SGSSSVHQH 799
+ H NIV L + L++ EY L +L ++ S + +
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
L L + A+G+ ++ + IHRD+ + NILL KI DFGLA+ +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 860 QGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEAN 909
V APE YT + D++S+G+ L EL + G
Sbjct: 198 DSN-----YVVKGNARLPVKWMAPESIFNCVYTFES----DVWSYGIFLWELFSLGSSPY 248
Query: 910 YG-DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS 968
G + + + P E E +Y + C P RP+
Sbjct: 249 PGMPVDSKFYKMIKEGFRMLSP----------EHAPAE----MYDIMKTCWDADPLKRPT 294
Query: 969 MKEVLQILRRCC-PTENY 985
K+++Q++ + + N+
Sbjct: 295 FKQIVQLIEKQISESTNH 312
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 9e-28
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 43/256 (16%)
Query: 664 RRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKR 723
+ DP + G T + T +IG+G G V++ + + E VA+K+
Sbjct: 14 KLNPLDDPNKV-IKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKK 71
Query: 724 IWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLWCCISSENSKL------LVYEYMENQ 776
+ +K F E++I+ ++H N+V L S K LV EY+ +
Sbjct: 72 V--------LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-E 122
Query: 777 SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSS 836
++ R + + + + ++ Q+ + L Y+H + I HRD+K
Sbjct: 123 TVYRASRHYAKLKQTMPMLLIKLYMY-----QLL----RSLAYIH---SIGICHRDIKPQ 170
Query: 837 NILLDSE-FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKI 890
N+LLD K+ DFG AK+L GEP+ S + S Y APE YTT I
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIA-GEPNV-SYIC-SRYYRAPELIFGATNYTT----NI 223
Query: 891 DIYSFGVVLLELVTGK 906
DI+S G V+ EL+ G+
Sbjct: 224 DIWSTGCVMAELMQGQ 239
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 63/298 (21%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF-VAVKRIWNNRKLNQKLEKEFIAEIEILG 746
+ + ++GSG G VY+ I + VA+K + + K KE + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMA 72
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
++ + ++ +L + + L+ + M L ++ K ++ S
Sbjct: 73 SVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGS------------QYL 119
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
L + A+G+ Y+ ++HRD+ + N+L+ + KI DFGLAK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH 175
Query: 867 SAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
+ G A E + D++S+GV + EL+T +G + +
Sbjct: 176 A----EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT-----FGSK-----PYD 221
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+E I+ L+KG P VY + + C SRP +E++ +
Sbjct: 222 GIPASE---ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 63/311 (20%), Positives = 112/311 (36%), Gaps = 65/311 (20%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ + ++G G G+VY + G VAVK + +++F++E I+
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKN 69
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
+ H +IVKL I E ++ E L +L K SL T +
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKV------------LTLV 116
Query: 808 QIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++ + + Y+ + +HRD+ NIL+ S K+ DFGL++ + +
Sbjct: 117 LYSLQICKAMAYLESIN-----CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE----- 166
Query: 866 MSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920
S +PE + D++ F V + E+++ +G
Sbjct: 167 -DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS-----FG--------- 211
Query: 921 AWRHYAEEKP--------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEV 972
++P + L+KG P +Y L C PS RP E+
Sbjct: 212 -------KQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264
Query: 973 LQILRRCCPTE 983
+ L E
Sbjct: 265 VCSLSDVYQME 275
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 30/217 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLW 757
+G G G V ++ +G+ +AVKRI +N + +K + +++I + T+ V +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ E + E M + SLD++ + ++ ++ + +L +IA+ + L
Sbjct: 73 GALFREGDVWICMELM-DTSLDKFY----KQVIDKGQTIPEDILG-----KIAVSIVKAL 122
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
++H +IHRDVK SN+L+++ + K+ DFG++ L AG Y A
Sbjct: 123 EHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI---DAGCKPYMA 177
Query: 878 PE--------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE Y+ K DI+S G+ ++EL +
Sbjct: 178 PERINPELNQKGYSVKS----DIWSLGITMIELAILR 210
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 42/306 (13%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+T S +G G G VY + VA+K + N + + EF+ E ++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 82
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
++V+L +S L++ E M L +L R ++ V
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLA-PPSLSK 139
Query: 806 RLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
+Q+A A G+ Y+ + +HRD+ + N ++ +F KI DFG+ + + +
Sbjct: 140 MIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 193
Query: 864 HTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 917
G G +PE D++SFGVVL E+ T ++ G + +
Sbjct: 194 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249
Query: 918 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ +KP + C ++ L +C P RPS E++ ++
Sbjct: 250 LRFVMEGGLLDKP----------DNCPDM----LFELMRMCWQYNPKMRPSFLEIISSIK 295
Query: 978 RCCPTE 983
Sbjct: 296 EEMEPG 301
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 74/309 (23%), Positives = 127/309 (41%), Gaps = 49/309 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIE 743
LT +G G GQV ID + E VAVK + +K + ++E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEME 92
Query: 744 ILGTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQH 799
++ I +H NI+ L + + ++ EY +L +L R+ + V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
+ + + A+G+ Y+ + + IHRD+ + N+L+ KIADFGLA+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 860 QGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEAN 909
+ G APE YT + D++SFGV++ E+ T G
Sbjct: 210 IDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQS----DVWSFGVLMWEIFTLGGSPY 260
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
G L + + +KP C E +Y + C +PS RP+
Sbjct: 261 PGIPVEELFKLLKEGHRMDKP----------ANCTNE----LYMMMRDCWHAVPSQRPTF 306
Query: 970 KEVLQILRR 978
K++++ L R
Sbjct: 307 KQLVEDLDR 315
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 66/315 (20%), Positives = 111/315 (35%), Gaps = 71/315 (22%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ IG G G V++ + VA+K N + + ++F+ E +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQ 72
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H +IVKL + +EN ++ E L +L RK SL + +
Sbjct: 73 FDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDL------------ASLI 119
Query: 808 QIAIGAAQGLCYM-HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
A + L Y+ +HRD+ + N+L+ S K+ DFGL++ +
Sbjct: 120 LYAYQLSTALAYLESKRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------ 169
Query: 867 SAVAGSFGYF-----APEYA----YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+ S G APE +T+ D++ FGV + E++ +G
Sbjct: 170 TYYKASKGKLPIKWMAPESINFRRFTSAS----DVWMFGVCMWEILM-----HG------ 214
Query: 918 AEWAWRHYAEEKP--------ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
KP + ++ G P T+Y L C + PS RP
Sbjct: 215 ----------VKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 264
Query: 970 KEVLQILRRCCPTEN 984
E+ L E
Sbjct: 265 TELKAQLSTILEEEK 279
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-27
Identities = 72/325 (22%), Positives = 116/325 (35%), Gaps = 50/325 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
++T +G G G+VY + VAVK + +++ E +F+ E I+
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALII 128
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
H NIV+ + ++ E M L +L + SS L
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS------LAMLD 182
Query: 806 RLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSE---FKAKIADFGLAKMLAKQ 860
L +A A G Y+ +H IHRD+ + N LL AKI DFG+A+ + +
Sbjct: 183 LLHVARDIACGCQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 861 GEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEH 914
G G PE K D +SFGV+L E+ + G +
Sbjct: 238 GY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ E+ + P + C VYR+ C P RP+ +L+
Sbjct: 293 QEVLEFVTSGGRMDPP----------KNCPGP----VYRIMTQCWQHQPEDRPNFAIILE 338
Query: 975 ILRRCCPTENYGGKKMGRDVDSAPL 999
+ C + ++ PL
Sbjct: 339 RIEYCTQDPDV--INTALPIEYGPL 361
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 3e-27
Identities = 65/313 (20%), Positives = 110/313 (35%), Gaps = 62/313 (19%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKL 756
++ GG VY G+G A+KR+ ++ + I E+ + + H NIV+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 757 WCCISSENSK--------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
S + LL+ E + Q ++ R L T L+
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP-----------LSCDTVLK 140
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
I + + +MH P IIHRD+K N+LL ++ K+ DFG A ++ + +
Sbjct: 141 IFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 869 VA----------GSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ Y PE Y+ + EK DI++ G +L L + ++
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQHPF--EDG 256
Query: 915 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL---PSSRPSMKE 971
L I + + LI + L P R S+ E
Sbjct: 257 AKLR------------IVNGKYSIPPHDTQYTVFHS-----LI-RAMLQVNPEERLSIAE 298
Query: 972 VLQILRRCCPTEN 984
V+ L+ N
Sbjct: 299 VVHQLQEIAAARN 311
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-27
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G G VY +A+K ++ ++ + +E + EIEI +RH NI++++
Sbjct: 21 PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
L+ E+ L + L R S++ + ++A L
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELA----DAL 127
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
Y H ++IHRD+K N+L+ + + KIADFG + A TM G+ Y
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRTM---CGTLDYLP 180
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
PE +EK+D++ GV+ E + G
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-27
Identities = 72/358 (20%), Positives = 135/358 (37%), Gaps = 31/358 (8%)
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP-EAMSNLSSLEILAL 250
+ + + + E L K + + + ++P + + +E+L L
Sbjct: 24 QYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKN-STMRKLPAALLDSFRQVELLNL 82
Query: 251 NGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIP 307
N +E I + F + + +L++ N + +P V LT + L N+L+ S+P
Sbjct: 83 NDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLP 139
Query: 308 EE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
F L L + +N+L + +L+ ++ +N L+ V ++ L +L
Sbjct: 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFH 196
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL 426
VS N S L ++ + A N+++ V + L ++L N + +
Sbjct: 197 ANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNLT-DT 247
Query: 427 PTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRGVGSWKNLI 483
L L + LS N + ++ + RLE ISNNR + L
Sbjct: 248 AW-LLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLK 304
Query: 484 VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS 541
V S+N + L L LD N + L + +L NL L+ N+
Sbjct: 305 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLS--THHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 1e-26
Identities = 59/309 (19%), Positives = 118/309 (38%), Gaps = 24/309 (7%)
Query: 71 TFNSVTGISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
T N+ ++ ++ + K+P ++ + + ++L+ I +Q L +
Sbjct: 49 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMG 107
Query: 130 QNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFNGTFPK 187
N +P + + L + L N+ S +PR I +L TL + N
Sbjct: 108 FNAIRY-LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD 165
Query: 188 EIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEI 247
++L+ L L+ N + ++ ++ L ++ NL+ + ++E
Sbjct: 166 TFQATTSLQNLQLSSNR-----LTHVDLSLIPSLFHANVSY-NLLSTLA----IPIAVEE 215
Query: 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIP 307
L + N + + + + LT L L N L+ + + L ++DLS N L I
Sbjct: 216 LDASHNSIN-VVRGPVNV--ELTILKLQHNNLT-DTAWLLNYPGLVEVDLSYNELE-KIM 270
Query: 308 EE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
F K++ L+ L + +N L + IP LK + +N L + LE
Sbjct: 271 YHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328
Query: 367 FEVSTNQFS 375
+ N
Sbjct: 329 LYLDHNSIV 337
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 7e-26
Identities = 65/399 (16%), Positives = 132/399 (33%), Gaps = 56/399 (14%)
Query: 241 NLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDL 297
L++ +I+ + + +P+ L + L L D + EI + A + + +
Sbjct: 49 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYM 106
Query: 298 SMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSLSGVLP 355
N + +P F + L +L L N LS +P I P L + NN+L +
Sbjct: 107 GFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIE 163
Query: 356 PEIGLH-SALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRT 414
+ ++L+ ++S+N+ + + + + L
Sbjct: 164 DDTFQATTSLQNLQLSSNRLTH-VDLS-----------LIPS---------------LFH 196
Query: 415 VQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQR 474
+ N + L + L S N+I+ + LT L++ +N +
Sbjct: 197 ANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPVNVELTILKLQHNNLT-DTA- 248
Query: 475 GVGSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 533
+ ++ L+ S N +I + L L + N+L L +L L
Sbjct: 249 WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVL 306
Query: 534 NLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGN--- 590
+L+ N L + + + +L L N + L LS N N
Sbjct: 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLST-HHTLKNLTLSHNDWDCNSLR 363
Query: 591 -IPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRN 628
+ A DD+ + + + + +
Sbjct: 364 ALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLD 402
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-25
Identities = 61/378 (16%), Positives = 125/378 (33%), Gaps = 33/378 (8%)
Query: 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNF 157
N+ I ++ + + ++ + + +
Sbjct: 8 NVKPRQPEYKCIDSNLQYDCV----FYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTM 63
Query: 158 SGDIPRSI-GRLSELQTLYLYMNEFNGTFPKEI-GDLSNLEVLGLAYNSNFKPAMIPIE- 214
+P ++ +++ L L + ++ L + +N +P
Sbjct: 64 R-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFN---AIRYLPPHV 118
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQL 272
F + L L + E N + +P + N L L+++ N+LE I F +L L
Sbjct: 119 FQNVPLLTVLVL-ERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNL 176
Query: 273 FLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332
L N L+ + S+ L ++S N L+ ++ L N ++ V
Sbjct: 177 QLSSNRLT-HVDLSLIP-SLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRG 228
Query: 333 SIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGV 391
+ L K+ +N+L+ + L ++S N+ + + L+ +
Sbjct: 229 PV--NVELTILKLQHNNLTD-TAWLLNY-PGLVEVDLSYNELEK-IMYHPFVKMQRLERL 283
Query: 392 VAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELP 451
N L A+ TL+ + L N + L +L L N+I L
Sbjct: 284 YISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK 340
Query: 452 SKTAWNLTRLEISNNRFS 469
T L L +S+N +
Sbjct: 341 LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-24
Identities = 66/371 (17%), Positives = 127/371 (34%), Gaps = 55/371 (14%)
Query: 230 NLIGEIPEAMSNLSSLE-ILALNGNHLEGAIPSGLFL------LNNLTQLFLYDNILSGE 282
N+ PE S+L+ H++ ++ LNN + ++ + +
Sbjct: 8 NVKPRQPEYKCIDSNLQYDCVFYDVHID-MQTQDVYFGFEDITLNNQKIVTFKNSTMR-K 65
Query: 283 IPSSV--EALKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPA 339
+P+++ ++ ++L+ + I F +Q L + N + P +P
Sbjct: 66 LPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL 124
Query: 340 LKKFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENN 397
L + N LS LP I L +S N + ++
Sbjct: 125 LTVLVLERNDLS-SLPRGIFHNTPK-LTTLSMSNNNLER-IEDDT--------------- 166
Query: 398 LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWN 457
+L+ +QL SNR + + L +L +S N +S L
Sbjct: 167 --------FQATTSLQNLQLSSNRLT-HVDLSLIP--SLFHANVSYNLLS-TLAIPI--A 212
Query: 458 LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLS 517
+ L+ S+N + ++ V L + K +N + + L + L + L N+L
Sbjct: 213 VEELDASHNSIN-VVRGPVNV--ELTILKLQHNNLT-DTAW-LLNYPGLVEVDLSYNELE 267
Query: 518 GKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-K 576
+ V L L ++ N L + + + LDLS N + Q +
Sbjct: 268 KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325
Query: 577 LNTFNLSSNKL 587
L L N +
Sbjct: 326 LENLYLDHNSI 336
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 6e-18
Identities = 60/393 (15%), Positives = 107/393 (27%), Gaps = 34/393 (8%)
Query: 96 LKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155
+ +L ++S N + L ++ LD S N + + L + L N
Sbjct: 191 IPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHN 242
Query: 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI-GDLSNLEVLGLAYNSNFKPAMIPIE 214
N + D + L + L NE + LE L ++ N + + +
Sbjct: 243 NLT-DTA-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNN---RLVALNLY 296
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFL 274
+ LK L + N + + LE L L+ N + + + L L L
Sbjct: 297 GQPIPTLKVLDL-SHNHLLHVERNQPQFDRLENLYLDHNSIV-TLKLSTH--HTLKNLTL 352
Query: 275 YDNILSG----EIPSSVEALKLTDIDLSMN---NLTGSI--PEEFGKLKNLQLLGLFSNH 325
N + +V + D D L + E + L +
Sbjct: 353 SHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDRLLQYIALTS 412
Query: 326 LSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAG 385
+ +V + G+ A + + E E N+
Sbjct: 413 VVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNEL------RAEVQ 466
Query: 386 GVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNT 445
+ + E L G + N R R + R S L + L +
Sbjct: 467 QLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLARSSDNLNKVFTHLKERQAFKLRETQ 526
Query: 446 ISGELPSKTAWNLTRLEISNNRFSGQIQRGVGS 478
LE N Q+
Sbjct: 527 ARRTEADAKQKETEDLEQENIALEKQLDNKRAK 559
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 41/287 (14%), Positives = 83/287 (28%), Gaps = 22/287 (7%)
Query: 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVG 135
+ + + + + + L +DLS N + +L+NL L N V
Sbjct: 281 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIV- 337
Query: 136 PIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD---- 191
+ L+ + L N++ + R++ + + + + ++
Sbjct: 338 TLKLST--HHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHGLCC 393
Query: 192 ---LSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEI 247
L Y + G T+ ++ + L E
Sbjct: 394 KESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQ 453
Query: 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIP 307
L N L + L N Q L EI +++ +L L + ++
Sbjct: 454 LEAEVNELRAEVQQ---LTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGL--ARSSDNLN 508
Query: 308 EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVL 354
+ F LK Q L + K + + N +L L
Sbjct: 509 KVFTHLKERQAFKLRETQARRTEADA--KQKETEDLEQENIALEKQL 553
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 68/315 (21%), Positives = 113/315 (35%), Gaps = 59/315 (18%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
L +G G GQV I+ VAVK + + ++E++IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 746 GTI-RHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQHV 800
I H N+V L C +++ E+ + +L +L ++ +++
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L + + A+G M + + IHRD+ + NILL + KI DFGLA+ + K
Sbjct: 145 LTLEHLICYSFQVAKG---MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 861 GEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 911
+ V APE YT + D++SFGV+L E+ + G
Sbjct: 202 PD-----YVRKGDARLPLKWMAPETIFDRVYTIQS----DVWSFGVLLWEIFS-----LG 247
Query: 912 -------DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPS 964
P + E +Y+ L C PS
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAP----------DYTTPE----MYQTMLDCWHGEPS 293
Query: 965 SRPSMKEVLQILRRC 979
RP+ E+++ L
Sbjct: 294 QRPTFSELVEHLGNL 308
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 4e-27
Identities = 38/270 (14%), Positives = 72/270 (26%), Gaps = 36/270 (13%)
Query: 693 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA- 751
L ++G GE V + + K+ E+ L +R
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 752 ---------------------NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLV 790
K+ E ++ + + L L+
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199
Query: 791 SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850
S SS+ L RLQ+ + + L +HH ++H ++ +I+LD +
Sbjct: 200 SHSST--HKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTG 254
Query: 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTG 905
F A T + D ++ G+ + +
Sbjct: 255 FEHLVRDGASAVSPIGRGF-APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313
Query: 906 KEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
N D +EW + K I +
Sbjct: 314 DLPNTDDAALGGSEW---IFRSCKNIPQPV 340
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 55/239 (23%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVK-- 755
+G+G GQVY+ G+ A+K + + E+E EI +L H NI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 756 ---LWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+ + +L LV E+ S+ + K + + IA
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL--------------KEEWIAY 133
Query: 812 ---GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ-------- 860
+GL ++H ++IHRD+K N+LL + K+ DFG++ L +
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKV-----NEKIDIYSFGVVLLELVTGKEANYGDEH 914
G P+ M APE + + K D++S G+ +E+ G D H
Sbjct: 191 GTPYWM----------APEVIACDENPDATYDFKSDLWSLGITAIEMAEG-APPLCDMH 238
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 4e-27
Identities = 62/303 (20%), Positives = 107/303 (35%), Gaps = 47/303 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ IG G G V++ + VA+K N + + ++F+ E +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQ 447
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
H +IVKL + +EN ++ E L +L RK SL + +
Sbjct: 448 FDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDL------------ASLI 494
Query: 808 QIAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
A + L Y+ +HRD+ + N+L+ S K+ DFGL++ +
Sbjct: 495 LYAYQLSTALAYLESKRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------ 544
Query: 867 SAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
+ S G APE + D++ FGV + E++ +
Sbjct: 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----------- 593
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 981
+ + ++ G P T+Y L C + PS RP E+ L
Sbjct: 594 QGVKNND--VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
Query: 982 TEN 984
E
Sbjct: 652 EEK 654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 5e-27
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLW 757
IG G G V ++ +G+ +AVKRI +++K +K+ + ++++ + + IV+ +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ E + E M + S D++ K + + +L +I + + L
Sbjct: 88 GALFREGDCWICMELM-STSFDKFY---KYVYSVLDDVIPEEILG-----KITLATVKAL 138
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA--VAGSFGY 875
++ + +IIHRD+K SNILLD K+ DFG++ L +++ AG Y
Sbjct: 139 NHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-----DSIAKTRDAGCRPY 191
Query: 876 FAPE--------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
APE Y + D++S G+ L EL TG+
Sbjct: 192 MAPERIDPSASRQGYDVRS----DVWSLGITLYELATGR 226
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 5e-27
Identities = 57/244 (23%), Positives = 84/244 (34%), Gaps = 40/244 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE---FIAEIEILGTIRHANIVK 755
IG G G V N A+K + N K+ Q K+ E+ ++ + H NI +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIM-NKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 756 LWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
L+ E LV E L D+ S + V + +
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 815 --------------------------QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA-- 846
L Y+H+ I HRD+K N L +
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEI 209
Query: 847 KIADFGLAKML--AKQGEPHTMSAVAGSFGYFAPE--YAYTTKVNEKIDIYSFGVVLLEL 902
K+ DFGL+K GE + M+ AG+ + APE K D +S GV+L L
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 903 VTGK 906
+ G
Sbjct: 270 LMGA 273
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-27
Identities = 94/561 (16%), Positives = 191/561 (34%), Gaps = 94/561 (16%)
Query: 64 DWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSN---SIPGEFPEFLYNC 120
D I +F+ V ++L +T + + +D S+ +P + P
Sbjct: 4 DRKPIVGSFHFVCALALIVGSMTP------FSNELESMVDYSNRNLTHVPKDLP------ 51
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMN 179
+ + L LSQN DI +S L+ + L N + + +L+ L + N
Sbjct: 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHN 110
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
L N+ + L+ L ++ N +P
Sbjct: 111 R-----------LQNIS------------------CCPMASLRHLDLSF-NDFDVLPVCK 140
Query: 240 --SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLY--DNILSGEIPSSVEALKLTDI 295
NL+ L L L+ + +L+ + L + G S++ T +
Sbjct: 141 EFGNLTKLTFLGLSAAKFR-QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL 199
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG-------EVPASIGKIPALKKFKVFNN 348
L + + + + L L L + L+ + + + P L + +
Sbjct: 200 HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHI 259
Query: 349 SLSGVLPPEIGL---HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKS 405
+ ++ +E + + + S
Sbjct: 260 ETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREE-------------------FTYS 300
Query: 406 LGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISG--ELPSKTAWNLTRLE 462
++L + + F L++ F ++ MLS + + + + T L
Sbjct: 301 ETALKSLMIEHVKNQVFL-FSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLN 359
Query: 463 ISNNRFSGQIQRGVGSWKNLIVFKASNNLFS--GEIPVELTSLSHLNTLLLDGNKLSGKL 520
+ N F+ + +G + K L N ++ + ++S L TL + N L+
Sbjct: 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHA 419
Query: 521 PSQIVSW-TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLN 578
+ +W S+ LNL+ N L+G + + + + LDL N+ IP ++ L L
Sbjct: 420 YDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVK--VLDLHNNRIM-SIPKDVTHLQALQ 476
Query: 579 TFNLSSNKLYGNIPDE-FNNL 598
N++SN+L ++PD F+ L
Sbjct: 477 ELNVASNQL-KSVPDGVFDRL 496
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-23
Identities = 82/416 (19%), Positives = 144/416 (34%), Gaps = 38/416 (9%)
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL- 265
P +P + K L +++ N I E+ +S LS L +L L+ N + ++ +FL
Sbjct: 47 PKDLP------PRTKALSLSQ-NSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLF 98
Query: 266 LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPE--EFGKLKNLQLLGLFS 323
+L L + N L I L +DLS N+ +P EFG L L LGL +
Sbjct: 99 NQDLEYLDVSHNRLQ-NISCCP-MASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSA 155
Query: 324 NHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLC 383
+ + L + + +S + G +L+ + P +L
Sbjct: 156 AKFRQ---LDLLPVAHLHLSCILLDLVSYHIKG--GETESLQIPNTTVLHLVFH-PNSLF 209
Query: 384 AGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSD 443
+ V V A + + + NC+ L T R L L + +
Sbjct: 210 SVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLL------NVTLQHIETTW 263
Query: 444 NTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW-----KNLIVFKASNNLFSGEIPV 498
+ L I N + +I R ++ K+L++ N +F
Sbjct: 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEA 323
Query: 499 ELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLD 558
+ + +N +L + S +S LN +N + + + +L + +L
Sbjct: 324 LYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLI 383
Query: 559 LSGNQFSGEIPPEIGQL----KLNTFNLSSNKLYGNIPDEFNNLAYDDSFLN-NSN 609
L N L T ++S N L + D A LN +SN
Sbjct: 384 LQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSN 438
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 5e-16
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)
Query: 80 LRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPS 139
++++ + + LS + P + + L+ +QN F +
Sbjct: 312 VKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQ 371
Query: 140 DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN----GTFPKEIGDLSNL 195
+ LQ + L N + + + +L N + + ++
Sbjct: 372 GCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430
Query: 196 EVLGLAYNSNFKPAMIPIEFGML-KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNH 254
VL L+ N + F L K+K L + N I IP+ +++L +L+ L + N
Sbjct: 431 LVLNLSSNM-----LTGSVFRCLPPKVKVLDLHN-NRIMSIPKDVTHLQALQELNVASNQ 484
Query: 255 LEGAIPSGLF-LLNNLTQLFLYDN 277
L+ ++P G+F L +L ++L+DN
Sbjct: 485 LK-SVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 9e-16
Identities = 45/312 (14%), Positives = 104/312 (33%), Gaps = 21/312 (6%)
Query: 52 SLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPG 111
+ S + ++ I L ++ + + + + T ++++ I
Sbjct: 202 VFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261
Query: 112 EFPEF-----LYNCTKLQNLDLSQNYFVGPIPSDIDRISG-----LQCIDLGGNNFSGDI 161
+ + ++ L++ I + S L + F
Sbjct: 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSK 321
Query: 162 PRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKL 221
+E+ L +++ S+ L N + LK+L
Sbjct: 322 EALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF--TDSVFQGCSTLKRL 379
Query: 222 KTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF-----LLNNLTQLFLYD 276
+TL + + N + + ++ L L ++ S + ++ L L
Sbjct: 380 QTLIL-QRNGLKNFFKVALMTKNMSSLETLDVSLN-SLNSHAYDRTCAWAESILVLNLSS 437
Query: 277 NILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGK 336
N+L+G + + K+ +DL N + SIP++ L+ LQ L + SN L +
Sbjct: 438 NMLTGSVFRCL-PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDR 495
Query: 337 IPALKKFKVFNN 348
+ +L+ + +N
Sbjct: 496 LTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 1e-05
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 79 SLRHKDIT-QKIPPIICD-----LKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY 132
SL D++ + D +++ ++LSSN + G L K++ LDL N
Sbjct: 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNR 461
Query: 133 FVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEF 181
+ IP D+ + LQ +++ N +P + RL+ LQ ++L+ N +
Sbjct: 462 IMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 4e-05
Identities = 39/174 (22%), Positives = 62/174 (35%), Gaps = 9/174 (5%)
Query: 488 SNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPK 546
S N S +++ LS L L L N++ L + + L L+++ N L I
Sbjct: 60 SQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQ-NIS- 116
Query: 547 AIGSLLVMVSLDLSGNQFSGEIPP--EIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDS 603
+ + LDLS N F +P E G L KL LS+ K +L
Sbjct: 117 -CCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCI 174
Query: 604 FLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWF 657
L+ + +K + P+ L + V + L + LS
Sbjct: 175 LLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNI 228
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 7e-27
Identities = 56/317 (17%), Positives = 109/317 (34%), Gaps = 71/317 (22%)
Query: 686 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+S + E IGSG G V++ G A+KR E+ + E+
Sbjct: 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAH 64
Query: 746 GTI-RHANIVKLWCCISSENSKLLVY-EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
+ +H+++V+ + + E+ +L+ EY SL + R + + + +L
Sbjct: 65 AVLGQHSHVVRYFSAWA-EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-- 121
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD-------------------SEF 844
LQ+ +GL Y+H ++H D+K SNI + ++
Sbjct: 122 ---LQVG----RGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 845 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVL 899
KI D G ++ P G + A E Y + K DI++ + +
Sbjct: 172 MFKIGDLGHVTRISS---PQVE---EGDSRFLANEVLQENYTHLPKA----DIFALALTV 221
Query: 900 LELVTGKEANYGDEHTSLAEWAWRHYAEEK--PITDALDKGIAEPCYLEEMTTVYRLALI 957
+ + + W + + I +E T + ++
Sbjct: 222 VCAAGAEPLPRNGDQ-------WHEIRQGRLPRIPQ---------VLSQEFTELLKV--- 262
Query: 958 CTSTLPSSRPSMKEVLQ 974
P RPS +++
Sbjct: 263 MIHPDPERRPSAMALVK 279
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-27
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G G VY+ VA+K I +LE E I E+ +L ++HAN
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI--------RLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV L I +E S LV+EY++ + L ++L + + + L Q+
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNII---NMHNVKLFLF-----QLL-- 110
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL Y H +++HRD+K N+L++ + K+ADFGLA+ AK T +
Sbjct: 111 --RGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVT 163
Query: 873 FGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
Y P+ Y+T++ D++ G + E+ TG+
Sbjct: 164 LWYRPPDILLGSTDYSTQI----DMWGVGCIFYEMATGR 198
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 9e-27
Identities = 50/317 (15%), Positives = 104/317 (32%), Gaps = 81/317 (25%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIE 743
L + +G G ++++ ++ G+ V +K + K ++ + F
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL---DKAHRNYSESFFEAAS 64
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
++ + H ++V + + +LV E+++ SLD +L K +
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINI------------ 112
Query: 804 PTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFK--------AKIADFGL 853
+L++A A + ++ + +IH +V + NILL E K++D G+
Sbjct: 113 LWKLEVAKQLAAAMHFLEENT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167
Query: 854 AKMLAKQGEPHTMSAVAGSFGYF-----APE-----YAYTTKVNEKIDIYSFGVVLLELV 903
+ + + PE D +SFG L E+
Sbjct: 168 SITVLPK-----------DILQERIPWVPPECIENPKNLNLAT----DKWSFGTTLWEIC 212
Query: 904 TGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG--IAEPCYLEEMTTVYRLALICTST 961
+G + + + P E + L C
Sbjct: 213 SGGDKPLSA--LDSQR-----------KLQFYEDRHQLPAPKAAE----LANLINNCMDY 255
Query: 962 LPSSRPSMKEVLQILRR 978
P RPS + +++ L
Sbjct: 256 EPDHRPSFRAIIRDLNS 272
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-26
Identities = 44/224 (19%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVK--------------RIWNNRKLNQKLEKEFIAEIEI 744
+ G ++ + + +F A+K + N++ + +F E++I
Sbjct: 39 LNQGKFNKIILCEKDN--KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
+ I++ + I++ + ++YEYMEN S+ ++ + + + V+
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+ + Y+H++ I HRDVK SNIL+D + K++DFG ++ +
Sbjct: 157 IK-SVL----NSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEY-MVDKKIK 208
Query: 865 TMSAVAGSFGYFAPEYAYTTKV--NEKIDIYSFGVVLLELVTGK 906
G++ + PE+ K+DI+S G+ L +
Sbjct: 209 GS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 60/306 (19%), Positives = 109/306 (35%), Gaps = 49/306 (16%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
T ++G G G V +G+ VAVK + + +EF+ E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKE 81
Query: 748 IRHANIVKLW-CCISSENSK-----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
H ++ KL + S +++ +M++ L +L + ++ L
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--LASRIGENPFNLPLQTL 139
Query: 802 HWPTRLQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
++ + A G+ Y+ + IHRD+ + N +L + +ADFGL++ +
Sbjct: 140 -----VRFMVDIACGMEYLSSRN-----FIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 860 QGEPHTMSAVAGSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDE 913
G A E D+++FGV + E++T G+ G E
Sbjct: 190 GDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244
Query: 914 HTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 973
+ + + ++P C E VY L C S P RPS +
Sbjct: 245 NAEIYNYLIGGNRLKQP----------PECMEE----VYDLMYQCWSADPKQRPSFTCLR 290
Query: 974 QILRRC 979
L
Sbjct: 291 MELENI 296
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-26
Identities = 77/318 (24%), Positives = 124/318 (38%), Gaps = 58/318 (18%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+++ IG G G+V++ + F VAVK + + + ++ +F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALM 104
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+ NIVKL + L++EYM L+ +L V S +
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 806 R-----------LQIAIGAAQGLCYM--HHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852
L IA A G+ Y+ +HRD+ + N L+ KIADFG
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIADFG 219
Query: 853 LAKMLAKQGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELV 903
L++ + A PE YTT+ D++++GVVL E+
Sbjct: 220 LSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTES----DVWAYGVVLWEIF 270
Query: 904 T-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL 962
+ G + YG H + + P E C LE +Y L +C S L
Sbjct: 271 SYGLQPYYGMAHEEVIYYVRDGNILACP----------ENCPLE----LYNLMRLCWSKL 316
Query: 963 PSSRPSMKEVLQILRRCC 980
P+ RPS + +IL+R C
Sbjct: 317 PADRPSFCSIHRILQRMC 334
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 1e-26
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-NQKLEKEFIAEIE 743
+ + G G G V G VA+K++ + + N++L+ ++
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-----IMQ 71
Query: 744 ILGTIRHANIVKLWCCISSENSK-------LLVYEYMENQSLDRWLHGRKRSLVSGSSSV 796
L + H NIV+L + + +V EY+ +L R R V+ +
Sbjct: 72 DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPIL 130
Query: 797 HQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD-SEFKAKIADFGLAK 855
+ L Q+ + + +H + + HRD+K N+L++ ++ K+ DFG AK
Sbjct: 131 IKVFLF-----QLI----RSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
Query: 856 MLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
L+ EP+ + + S Y APE YTT +DI+S G + E++ G+
Sbjct: 181 KLSP-SEPNV-AYIC-SRYYRAPELIFGNQHYTT----AVDIWSVGCIFAEMMLGE 229
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 63/312 (20%), Positives = 120/312 (38%), Gaps = 56/312 (17%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
++L +G+G G+V + VAVK + + ++ ++E++I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEALMSELKIM 103
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVS-GSSSVHQHVLHW 803
+ +H NIV L + L++ EY L +L + R L + + ++
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
L + AQG+ ++ + IHRDV + N+LL + AKI DFGLA+ +
Sbjct: 164 RDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN- 219
Query: 864 HTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-------GKE 907
+ APE YT + D++S+G++L E+ + G
Sbjct: 220 ----YIVKGNARLPVKWMAPESIFDCVYTVQS----DVWSYGILLWEIFSLGLNPYPGIL 271
Query: 908 ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP 967
N + + Y +P +Y + C + P+ RP
Sbjct: 272 VN-----SKFYKLVKDGYQMAQP----------AFAPKN----IYSIMQACWALEPTHRP 312
Query: 968 SMKEVLQILRRC 979
+ +++ L+
Sbjct: 313 TFQQICSFLQEQ 324
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 61/288 (21%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 699 IGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G V + + VA+K + + +E + E +I+ + + IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 401
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+E + +LV E L ++L G++ + ++ + G
Sbjct: 402 IGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEI------------PVSNVAELLHQVSMG 448
Query: 817 LCY---MHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ Y + +HR++ + N+LL + AKI+DFGL+K L + + + AG +
Sbjct: 449 MKYLEEKN------FVHRNLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKW 501
Query: 874 GY--FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+APE K + + D++S+GV + E ++ + Y E +
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK--MKGPE-----------V 548
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+++G C E +Y L C RP V Q +R C
Sbjct: 549 MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 43/220 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEILGTIRHA 751
IG G G VY+ N GE A+K+I +LEKE I EI IL ++H+
Sbjct: 10 IGEGTYGVVYK-AQNNYGETFALKKI--------RLEKEDEGIPSTTIREISILKELKHS 60
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
NIVKL+ I ++ +LV+E+++ Q L + L + L S + L Q+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGL---ESVTAKSFLL-----QLL- 110
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
G+ Y H +++HRD+K N+L++ E + KIADFGLA+ A +
Sbjct: 111 ---NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIV 162
Query: 872 SFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y AP+ Y+T + DI+S G + E+V G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTI----DIWSVGCIFAEMVNGT 198
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 2e-26
Identities = 33/308 (10%), Positives = 74/308 (24%), Gaps = 55/308 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+ G V+ + E A+K + ++ + + + +
Sbjct: 69 PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128
Query: 758 CCI--------------------------SSENSKLLVYEYMENQSLDRWLHGRKRSLVS 791
+ + LL+ L+ V
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVF 187
Query: 792 GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851
+ + + ++H N+ + + + + D
Sbjct: 188 RGDEGILA------LHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDV 238
Query: 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEY--AYTTKVNEKIDIYSFGVVLLELVTGKEAN 909
K G A + Y E+ A T ++ + G+ + +
Sbjct: 239 SALW---KVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTL---PSSR 966
T + +W+ + P TD+L G P T + R L R
Sbjct: 294 --GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF-------LNFDRRRR 344
Query: 967 PSMKEVLQ 974
E ++
Sbjct: 345 LLPLEAME 352
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 70/221 (31%), Positives = 105/221 (47%), Gaps = 45/221 (20%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEILGTIRH 750
+G G G VY+ D G VA+KRI +L+ E I EI +L + H
Sbjct: 29 VGEGTYGVVYKAKDSQG--RIVALKRI--------RLDAEDEGIPSTAIREISLLKELHH 78
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
NIV L I SE LV+E+ME + L + L K L S + L+ Q+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL---QDSQIKIYLY-----QLL 129
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+G+ + H +I+HRD+K N+L++S+ K+ADFGLA+ A + +
Sbjct: 130 ----RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEV 180
Query: 871 GSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y AP+ Y+T V DI+S G + E++TGK
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSV----DIWSIGCIFAEMITGK 217
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-26
Identities = 64/317 (20%), Positives = 113/317 (35%), Gaps = 27/317 (8%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ L I +L ++L+ N + P N L+ L L N
Sbjct: 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90
Query: 132 YFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTF 185
IP + +S L +D+ N + + L L++L + N+ + F
Sbjct: 91 RLKL-IPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHRAF 148
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPE-AMSNLS 243
L++LE L L IP E L L L + I I + + L
Sbjct: 149 ----SGLNSLEQLTLEKC---NLTSIPTEALSHLHGLIVLRL-RHLNINAIRDYSFKRLY 200
Query: 244 SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV-EALK-LTDIDLSMNN 301
L++L ++ + NLT L + L+ +P L L ++LS N
Sbjct: 201 RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNP 259
Query: 302 LTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI-- 358
++ +I +L LQ + L L+ P + + L+ V N L+ L +
Sbjct: 260 IS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFH 317
Query: 359 GLHSALEGFEVSTNQFS 375
+ + LE + +N +
Sbjct: 318 SVGN-LETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-26
Identities = 64/384 (16%), Positives = 128/384 (33%), Gaps = 93/384 (24%)
Query: 193 SNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILA 249
+ +L L N F L+ L + E N++ + A +NL +L L
Sbjct: 32 TETRLLDLGKNRIKTLNQDE----FASFPHLEELELNE-NIVSAVEPGAFNNLFNLRTLG 86
Query: 250 LNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSI 306
L N L+ IP G+F L+NLT+L + +N + + + + L +++ N+L I
Sbjct: 87 LRSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLV-YI 143
Query: 307 PEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALE 365
F L +L+ L L +L+ ++ + L ++ + +++
Sbjct: 144 SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-------------- 189
Query: 366 GFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 425
+ F L+ +++ +
Sbjct: 190 --AIRDYSFKR--------------------------------LYRLKVLEISHWPYLDT 215
Query: 426 LPTGLWTTFNLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGVGSWKNL 482
+ NL+SL ++ ++ +P L L +S N S I+ +
Sbjct: 216 MTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSM------ 267
Query: 483 IVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNNLNLARNELS 541
L L + L G +L+ + L LN++ N+L+
Sbjct: 268 ---------LHE--------LLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT 309
Query: 542 GEIPKAIGSLLVMVSLDLSGNQFS 565
S+ + +L L N +
Sbjct: 310 TLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 45/244 (18%), Positives = 81/244 (33%), Gaps = 26/244 (10%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTG-LWTTFNLSSLMLSDNTISGELPSKT 454
N + + L ++L N S + G FNL +L L N + +P
Sbjct: 42 NRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGV 99
Query: 455 AW---NLTRLEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTL 509
NLT+L+IS N+ + + NL + +N I + L+ L L
Sbjct: 100 FTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQL 157
Query: 510 LLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 569
L+ L+ + L L L ++ + L + L++S + +
Sbjct: 158 TLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT 217
Query: 570 PEI-GQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV----KNPIINLPKCPS 624
P L L + +++ L +P + + L NPI + S
Sbjct: 218 PNCLYGLNLTSLSITHCNL-TAVP--------YLAVRHLVYLRFLNLSYNPISTIE--GS 266
Query: 625 RFRN 628
Sbjct: 267 MLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-13
Identities = 46/194 (23%), Positives = 68/194 (35%), Gaps = 16/194 (8%)
Query: 413 RTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFS 469
R V + RF +P G+ T L L N I L + LE ++ N S
Sbjct: 14 RAVLCHRKRFV-AVPEGIPT--ETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVS 69
Query: 470 GQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQIVSW 527
++ G + NL +N IP+ T LS+L L + NK+ L
Sbjct: 70 -AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 127
Query: 528 TSLNNLNLARNELSGEIP-KAIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTFNLSS 584
+L +L + N+L I +A L + L L + IP E L L
Sbjct: 128 YNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRH 185
Query: 585 NKLYGNIPDEFNNL 598
+ F L
Sbjct: 186 LNINAIRDYSFKRL 199
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 5e-26
Identities = 64/326 (19%), Positives = 111/326 (34%), Gaps = 65/326 (19%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+L ++GSG G+V I+ G VAVK + K + + ++E++++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKMM 102
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQ------ 798
+ H NIV L + L++EY L +L ++
Sbjct: 103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 799 ----HVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+VL + L A A+G M +HRD+ + N+L+ KI DFGLA
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKG---MEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 855 KMLAKQGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVTG 905
+ + V APE YT K D++S+G++L E+ +
Sbjct: 220 RDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKS----DVWSYGILLWEIFS- 269
Query: 906 KEANYG-------DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALIC 958
G + + + ++P E +Y + C
Sbjct: 270 ----LGVNPYPGIPVDANFYKLIQNGFKMDQP----------FYATEE----IYIIMQSC 311
Query: 959 TSTLPSSRPSMKEVLQILRRCCPTEN 984
+ RPS + L
Sbjct: 312 WAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-26
Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 36/236 (15%)
Query: 697 NLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEF---IAEIEILGTI 748
+L+G G QVY ++ + +K EF +E L
Sbjct: 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLK------VQKPANPWEFYIGTQLMERLKPS 124
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
+K + +N +LV E +L ++ K + + V+ +
Sbjct: 125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNT--------PEKVMPQGLVIS 176
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL-----------DSEFKAKIADFGLAKML 857
A+ + +H +IIH D+K N +L D + D G + +
Sbjct: 177 FAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233
Query: 858 AKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
+ +A + G+ E N +ID + + ++ G +E
Sbjct: 234 KLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 8e-26
Identities = 56/272 (20%), Positives = 95/272 (34%), Gaps = 29/272 (10%)
Query: 69 TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDL 128
+C+ + K +T +P I + T ++L SN + T+L L L
Sbjct: 6 SCSGTEI---RCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSL 59
Query: 129 SQN--YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----- 181
S N F G + L+ +DL N + + L +L+ L +
Sbjct: 60 SSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE 118
Query: 182 NGTFPKEIGDLSNLEVLGLAYNS-NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AM 239
F L NL L +++ I F L L+ L M +
Sbjct: 119 FSVF----LSLRNLIYLDISHTHTRVAFNGI---FNGLSSLEVLKMAGNSFQENFLPDIF 171
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDID 296
+ L +L L L+ LE + F L++L L + N + + L +D
Sbjct: 172 TELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLD 229
Query: 297 LSMNNLTGSIPEEFGKL-KNLQLLGLFSNHLS 327
S+N++ S +E +L L L N +
Sbjct: 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-23
Identities = 47/247 (19%), Positives = 84/247 (34%), Gaps = 22/247 (8%)
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
I + +P I S L L N+ L+ L L L+ N
Sbjct: 12 IRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68
Query: 210 MIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFL-LNN 268
LK L ++ N + + L LE L ++L+ +FL L N
Sbjct: 69 CCSQSDFGTTSLKYLDLSF-NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 127
Query: 269 LTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNH 325
L L + + + L L + ++ N+ + + F +L+NL L L
Sbjct: 128 LIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186
Query: 326 LSGEVPASI-GKIPALKKFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQFS------- 375
L ++ + + +L+ + +N+ L L+S L+ + S N
Sbjct: 187 LE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNS-LQVLDYSLNHIMTSKKQEL 243
Query: 376 GPLPENL 382
P +L
Sbjct: 244 QHFPSSL 250
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 55/307 (17%), Positives = 106/307 (34%), Gaps = 68/307 (22%)
Query: 244 SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNN 301
S + N L ++P+G+ ++ T+L L N L +P V + L +LT + LS N
Sbjct: 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNG 63
Query: 302 LT--GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI- 358
L+ G + +L+ L L N + + ++ + L+ +++L + +
Sbjct: 64 LSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 122
Query: 359 -GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417
L + L + + A +L +++
Sbjct: 123 LSLRN-------------------------LIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157
Query: 418 YSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQ 473
N F ++T NL+ L LS + +L +L+ L+ +S+N F +
Sbjct: 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLD 215
Query: 474 RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVS--WTSLN 531
+ L+ L L N + Q + +SL
Sbjct: 216 TFP---------------YKC--------LNSLQVLDYSLNHIM-TSKKQELQHFPSSLA 251
Query: 532 NLNLARN 538
LNL +N
Sbjct: 252 FLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 6e-12
Identities = 44/204 (21%), Positives = 71/204 (34%), Gaps = 17/204 (8%)
Query: 396 NNLS--GAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK 453
N LS G +S +L+ + L N + + L L + + ++
Sbjct: 62 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEF 119
Query: 454 TAW----NLTRLEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLN 507
+ + NL L+IS+ G+ +L V K + N F + T L +L
Sbjct: 120 SVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 178
Query: 508 TLLLDGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 566
L L +L +L S +SL LN++ N L + LD S N
Sbjct: 179 FLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM- 236
Query: 567 EIPPEIGQ---LKLNTFNLSSNKL 587
+ Q L NL+ N
Sbjct: 237 TSKKQELQHFPSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 409 CR-TLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI---S 464
C + ++ S + +PTG+ + + + L L N + LP LT+L S
Sbjct: 5 CSCSGTEIRCNSKGLT-SVPTGIPS--SATRLELESNKLQ-SLPHGVFDKLTQLTKLSLS 60
Query: 465 NNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI 524
+N S + G + L L L N + + S
Sbjct: 61 SNGLS--------------FKGCCSQSDFG--------TTSLKYLDLSFNGVI-TMSSNF 97
Query: 525 VSWTSLNNLNLARNELSGEIPK--AIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTF 580
+ L +L+ + L ++ + SL ++ LD+S I G L
Sbjct: 98 LGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVL 155
Query: 581 NLSSNKLYGNIPDE-FNNL 598
++ N N + F L
Sbjct: 156 KMAGNSFQENFLPDIFTEL 174
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 8e-26
Identities = 74/314 (23%), Positives = 127/314 (40%), Gaps = 54/314 (17%)
Query: 691 SSLTESNLIGSGGSGQVYR---IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+L +G G G+V + + G + VAVK + + ++ ++E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVL 80
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
+ H +++KL+ S + LL+ EY + SL +L ++ S
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 806 R-----------LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+ A +QG M + +++HRD+ + NIL+ K KI+DFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQG---MQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 855 KMLAKQGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT- 904
+ + ++ V S G A E + YTT+ D++SFGV+L E+VT
Sbjct: 198 RDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQS----DVWSFGVLLWEIVTL 248
Query: 905 GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPS 964
G G L + E+P + C E +YRL L C P
Sbjct: 249 GGNPYPGIPPERLFNLLKTGHRMERP----------DNCSEE----MYRLMLQCWKQEPD 294
Query: 965 SRPSMKEVLQILRR 978
RP ++ + L +
Sbjct: 295 KRPVFADISKDLEK 308
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEILGTIRH 750
IG G G V++ + E VA+KR+ +L+ + + EI +L ++H
Sbjct: 10 IGEGTYGTVFKAKNRET-HEIVALKRV--------RLDDDDEGVPSSALREICLLKELKH 60
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
NIV+L + S+ LV+E+ + Q L ++ L + + L Q+
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDL---DPEIVKSFLF-----QLL 111
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+GL + H ++HRD+K N+L++ + K+A+FGLA+ A SA
Sbjct: 112 ----KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEV 162
Query: 871 GSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGKEA 908
+ Y P+ Y+T + D++S G + EL
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSI----DMWSAGCIFAELANAGRP 201
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 31/241 (12%)
Query: 675 KLTSFHQLGFTESNI-LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK 733
K T + +G ++ L +GSG GQV+++ G +AVK++ R N++
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKE 65
Query: 734 LEKEFIAEIEIL-GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSG 792
K + +++++ + IV+ + + + E M + +
Sbjct: 66 ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP----- 120
Query: 793 SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852
+ + +L ++ + + L Y+ +IHRDVK SNILLD + K+ DFG
Sbjct: 121 ---IPERILG-----KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFG 170
Query: 853 LAKMLAKQGEPHTMSA--VAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTG 905
++ L + AG Y APE + + D++S G+ L+EL TG
Sbjct: 171 ISGRLVD-----DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 906 K 906
+
Sbjct: 226 Q 226
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 36/219 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+G+G VY+ G +VA+K + KL+ E I EI ++ ++H N
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV--------KLDSEEGTPSTAIREISLMKELKHEN 64
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV+L+ I +EN LV+E+M+ L +++ R ++ V ++ +L
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELN-LVKYFQWQLL---- 118
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
QGL + H + +I+HRD+K N+L++ + K+ DFGLA+ A +T S+ +
Sbjct: 119 --QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVT 171
Query: 873 FGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
Y AP+ Y+T + DI+S G +L E++TGK
Sbjct: 172 LWYRAPDVLMGSRTYSTSI----DIWSCGCILAEMITGK 206
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 67/314 (21%), Positives = 117/314 (37%), Gaps = 36/314 (11%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE 196
+P D+ +DL N + L L TL L N+ + P L LE
Sbjct: 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 197 VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHL 255
L L+ N + + M K L+ L + N I ++ + + L+ + ++ L N L
Sbjct: 104 RLYLSKNQ-----LKELPEKMPKTLQELRV-HENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 256 -EGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEE-FGK 312
I +G F + L+ + + D ++ IP + LT++ L N +T +
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPP-SLTELHLDGNKIT-KVDAASLKG 214
Query: 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTN 372
L NL LGL N +S S+ P L++ + NN L +P + H ++ + N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Query: 373 QFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLW 431
S + N F P + V L+SN E+ +
Sbjct: 274 NISA-IGSN-----------DF------CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315
Query: 432 TTF-NLSSLMLSDN 444
+++ L +
Sbjct: 316 RCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 1e-18
Identities = 66/346 (19%), Positives = 120/346 (34%), Gaps = 74/346 (21%)
Query: 268 NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
+L + D L ++P + +DL N +T +F LKNL L L +N +S
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPP-DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 328 GEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGV 387
P + + L++ + N L LP + L+ V N+ + + ++
Sbjct: 90 KISPGAFAPLVKLERLYLSKNQLK-ELPE--KMPKTLQELRVHENEITK-VRKS------ 139
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRF-SGELPTGLWTTF----NLSSLMLS 442
F L + V+L +N S + G F LS + ++
Sbjct: 140 -----VFNG---------LNQ---MIVVELGTNPLKSSGIENG---AFQGMKKLSYIRIA 179
Query: 443 DNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTS 502
D I+ +P +LT L + N+ + ++ L
Sbjct: 180 DTNIT-TIPQGLPPSLTELHLDGNKIT-KVDAAS-----------------------LKG 214
Query: 503 LSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGN 562
L++L L L N +S + + L L+L N+L ++P + + + L N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Query: 563 QFSGEIPPEI--------GQLKLNTFNLSSNKL-YGNIPDE-FNNL 598
S I + + +L SN + Y I F +
Sbjct: 274 NIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 75/311 (24%), Positives = 125/311 (40%), Gaps = 49/311 (15%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEF--VAVKRIWNNRKLNQKLEKEFIAEIE 743
L +G G GQV +D + VAVK + +K + I+E+E
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEME 126
Query: 744 ILGTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK---RSLVSGSSSVHQH 799
++ I +H NI+ L + + ++ EY +L +L R+ S +
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
L + A A+G+ Y+ + + IHRD+ + N+L+ + KIADFGLA+ +
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 860 QGEPHTMSAVAGSFGYF-----APE----YAYTTKVNEKIDIYSFGVVLLELVT-GKEAN 909
+ G APE YT + D++SFGV+L E+ T G
Sbjct: 244 IDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQS----DVWSFGVLLWEIFTLGGSPY 294
Query: 910 YGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 969
G L + + +KP C E +Y + C +PS RP+
Sbjct: 295 PGVPVEELFKLLKEGHRMDKP----------SNCTNE----LYMMMRDCWHAVPSQRPTF 340
Query: 970 KEVLQILRRCC 980
K++++ L R
Sbjct: 341 KQLVEDLDRIV 351
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-25
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL---EKEFIAEIEILGTIRHANIVK 755
IG G V R G+ AVK + + K ++ E I ++H +IV+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 756 LWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
L SS+ +V+E+M+ L + R + S +V H + QI
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFE-IVKRADAGFVYSEAVASHYMR-----QI----L 140
Query: 815 QGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVA 870
+ L Y H ++ IIHRDVK +LL S+ + K+ FG+A L + G
Sbjct: 141 EALRYCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRV 194
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
G+ + APE + +D++ GV+L
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 107 bits (267), Expect = 6e-25
Identities = 40/263 (15%), Positives = 75/263 (28%), Gaps = 50/263 (19%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-------- 749
++G GE V + + K+ E+ L +R
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 750 -----------------HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSG 792
++++ + Y QS + S S
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 793 SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 852
S+ H RLQ+ + + L +HH ++H ++ +I+LD + F
Sbjct: 200 HKSLVHHA-----RLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFE 251
Query: 853 LAKMLAKQGEPHTMSAVAGSFGYFAPEY-----------AYTTKVNEKIDIYSFGVVLLE 901
+ G S S G+ PE T + D ++ G+V+
Sbjct: 252 HLV---RDGARVVSS---VSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305
Query: 902 LVTGKEANYGDEHTSLAEWAWRH 924
+ D +EW +R
Sbjct: 306 IWCADLPITKDAALGGSEWIFRS 328
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 7e-25
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IG G +V G VA+K I + +LN ++ E+ I+ + H NIVKL+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 759 CISSENSKLLVYEYMENQSL-DRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
I +E + L+ EY + D + HGR + QI
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRM------KEKEARSKFR-----QI----VSA 126
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ Y H I+HRD+K+ N+LLD++ KIADFG + G+ G+ Y
Sbjct: 127 VQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF---CGAPPYA 180
Query: 877 APEY----AYTTKVNEKIDIYSFGVVLLELVTGK 906
APE Y ++D++S GV+L LV+G
Sbjct: 181 APELFQGKKYDGP---EVDVWSLGVILYTLVSGS 211
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 8e-25
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 675 KLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL 734
+ T + + ++ +GSG G+V A+K I ++
Sbjct: 21 QATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKII-RKTSVSTSS 79
Query: 735 EKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGS 793
+ + E+ +L + H NI+KL+ + + LV E + L D + R + +
Sbjct: 80 NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE-IIHRMKFNEVDA 138
Query: 794 SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIAD 850
+ + + VL G+ Y+H I+HRD+K N+LL+S + KI D
Sbjct: 139 AVIIKQVL-------------SGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182
Query: 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
FGL+ + + + M G+ Y APE K +EK D++S GV+L L+ G
Sbjct: 183 FGLSAVF-ENQKK--MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGY 234
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 9e-25
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 42/220 (19%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-----FIA--EIEILGTIRHA 751
IG G G V++ G+ VA+K+ ++ IA EI +L ++H
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF--------LESEDDPVIKKIALREIRMLKQLKHP 62
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
N+V L + LV+EY + ++ L +R + + + + Q
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQRGV---PEHLVKSITW-----QTL- 112
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
Q + + H IHRDVK NIL+ K+ DFG A++L + +
Sbjct: 113 ---QAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVAT- 165
Query: 872 SFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y +PE Y V D+++ G V EL++G
Sbjct: 166 -RWYRSPELLVGDTQYGPPV----DVWAIGCVFAELLSGV 200
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 42/226 (18%)
Query: 697 NLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEIL--- 745
IG G G+V++ D+ G FVA+KR+ +++ I E+ +L
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRV--------RVQTGEEGMPLSTIREVAVLRHL 68
Query: 746 GTIRHANIVKLWCCI-----SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800
T H N+V+L+ E LV+E+++ Q L +L V + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVP--TETIKDM 125
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
+ Q+ +GL ++H ++HRD+K NIL+ S + K+ADFGLA++
Sbjct: 126 MF-----QLL----RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY--- 170
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+++V + Y APE + +D++S G + E+ K
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 59/222 (26%), Positives = 89/222 (40%), Gaps = 42/222 (18%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE-----FIA--EIEILGTIR 749
L+G G G V + G VA+K+ + IA EI++L +R
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKF--------LESDDDKMVKKIAMREIKLLKQLR 82
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H N+V L + LV+E+++ ++ L L V Q L QI
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFPNGL---DYQVVQKYLF-----QI 133
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
G+ + H IIHRD+K NIL+ K+ DFG A+ LA GE +
Sbjct: 134 I----NGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 870 AGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE Y V D+++ G ++ E+ G+
Sbjct: 187 T--RWYRAPELLVGDVKYGKAV----DVWAIGCLVTEMFMGE 222
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEILGTIRHA 751
+G G G+VY+ E VA+KRI +LE E I E+ +L ++H
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI--------RLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
NI++L I + L++EY E L +++ S V + L+ Q+
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAE-NDLKKYMD----KNPDVSMRVIKSFLY-----QL-- 141
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA-----KIADFGLAKMLAKQGEPHTM 866
G+ + H + +HRD+K N+LL + KI DFGLA+ A
Sbjct: 142 --INGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQF 194
Query: 867 SAVAGSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + Y PE Y+T V DI+S + E++
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSV----DIWSIACIWAEMLMKT 235
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 78/388 (20%), Positives = 138/388 (35%), Gaps = 52/388 (13%)
Query: 230 NLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV 287
N I E+ E + S L L+ L + I + F L++L L L N ++ +
Sbjct: 40 NSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGA 98
Query: 288 -EAL-KLTDIDLSMNNLTGS-IPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKK 342
L L + L+ NL G+ + F L +L++L L N++ PAS +
Sbjct: 99 FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHV 158
Query: 343 FKVFNNSLSGVLPPEIGLH---SALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLS 399
+ N + + E L+ +S+ E L
Sbjct: 159 LDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQD----------------MNEYWLG 201
Query: 400 GAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFN---LSSLMLSDNTISGELPSKTAW 456
+ ++ T+ L N F + + + SL+LS++ G T +
Sbjct: 202 WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNF 261
Query: 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEL-TSLSHLNTLLLDGNK 515
+ N F G + S + + + + + L L L N+
Sbjct: 262 K----DPDNFTFKGL------EASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNE 310
Query: 516 LSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAI-GSLLVMVSLDLSGNQFSGEIPPEI- 572
++ K+ T L LNL++N L I + +L + LDLS N + +
Sbjct: 311 IN-KIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQSF 367
Query: 573 -GQLKLNTFNLSSNKLYGNIPDE-FNNL 598
G L L +N+L ++PD F+ L
Sbjct: 368 LGLPNLKELALDTNQLK-SVPDGIFDRL 394
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 9e-24
Identities = 82/441 (18%), Positives = 142/441 (32%), Gaps = 77/441 (17%)
Query: 160 DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGML 218
++P + + L +N L +L+ L + +I F L
Sbjct: 27 ELPAHV------NYVDLSLNSIAELNETSFSRLQDLQFLKV--EQQTPGLVIRNNTFRGL 78
Query: 219 KKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGA-IPSGLFL-LNNLTQLFLY 275
L L + N ++ A + L++LE+L L +L+GA + F L +L L L
Sbjct: 79 SSLIILKLDY-NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 276 DNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEEFGKLKNLQL--LGLFSNHLSGEVP 331
DN + P+S + +DL+ N + E+ + L L S L
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197
Query: 332 ASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGV 391
+G FK + + ++S N F + + +
Sbjct: 198 YWLGWEKCGNPFKNTS----------------ITTLDLSGNGFKESMAKRFFDAIAGTKI 241
Query: 392 VAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELP 451
+ + S + S G+ + F G + + + LS + I L
Sbjct: 242 QSLILSNSYNMGSSFGHT---NFKDPDNFTFKGLEAS------GVKTCDLSKSKIF-ALL 291
Query: 452 SKTAWNLTRLEI---SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNT 508
+ T LE + N + +I F G L+HL
Sbjct: 292 KSVFSHFTDLEQLTLAQNEIN-KIDDNA---------------FWG--------LTHLLK 327
Query: 509 LLLDGNKLSGKLPSQIVSW-TSLNNLNLARNELSGEIPKAIGSLLVMV-SLDLSGNQFSG 566
L L N L + S++ L L+L+ N + + L + L L NQ
Sbjct: 328 LNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK- 384
Query: 567 EIPPEI--GQLKLNTFNLSSN 585
+P I L L +N
Sbjct: 385 SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 9e-21
Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 35/286 (12%)
Query: 95 DLKNLTTIDLSSNSIPGEFPE-FLYNCTKLQNLDLSQN----------YFVGPIPSDIDR 143
L +L + L N+I P F N + LDL+ N + R
Sbjct: 127 PLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR 186
Query: 144 ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDL---SNLEVLGL 200
+S + D+ + + + + + TL L N F + K D + ++ L L
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 201 AYNSNFKPAMIPIEFGMLKK----------LKTLWMTEANLIGEIPEAM-SNLSSLEILA 249
+ + N + F +KT +++ + I + +++ S+ + LE L
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSK-SKIFALLKSVFSHFTDLEQLT 305
Query: 250 LNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSI 306
L N + I F L +L +L L N L I S + E L KL +DLS N++ ++
Sbjct: 306 LAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-AL 362
Query: 307 PEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSL 350
++ F L NL+ L L +N L VP I ++ +L+K + N
Sbjct: 363 GDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 2e-17
Identities = 79/486 (16%), Positives = 136/486 (27%), Gaps = 132/486 (27%)
Query: 74 SVTGISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPE-FLYNCTKLQNLDLSQN 131
V + L I ++ L++L + + + + L L L N
Sbjct: 31 HVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF------NGTF 185
+ L+ + L+ L+ L L F
Sbjct: 90 -----------QFLQLE-------------TGAFNGLANLEVLTLTQCNLDGAVLSGNFF 125
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM-SNLSS 244
L++LE+L L N +K + P + N+
Sbjct: 126 KP----LTSLEMLVLRDN----------------NIKKI----------QPASFFLNMRR 155
Query: 245 LEILALNGNHLEGAIPSGLFL---LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNN 301
+L L N ++ +I L + T L L L D++
Sbjct: 156 FHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQ---------------DMNEYW 199
Query: 302 LTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGL- 360
L K ++ L L N + K F ++++G + L
Sbjct: 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMA------------KRFFDAIAGTKIQSLILS 247
Query: 361 HSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFE---NNLSGAVPKSLGNCRTLRTVQL 417
+S G F G GV + + + + + L + L
Sbjct: 248 NSYNMGSSFGHTNFKD-PDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306
Query: 418 YSNRFSGELPTG-LWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI---SNNRFSGQIQ 473
N + ++ W +L L LS N + + S+ NL +LE+ S N +
Sbjct: 307 AQNEIN-KIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-ALG 363
Query: 474 RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNN 532
L +L L LD N+L +P I TSL
Sbjct: 364 DQS-----------------------FLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQK 399
Query: 533 LNLARN 538
+ L N
Sbjct: 400 IWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 5e-16
Identities = 77/356 (21%), Positives = 129/356 (36%), Gaps = 51/356 (14%)
Query: 282 EIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI-GKIPAL 340
E+P+ V + DLS+N++ F +L++LQ L + + + + +L
Sbjct: 27 ELPAHVNYV-----DLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81
Query: 341 KKFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQF-SGPLPENLCAGGV-LQGVVAFEN 396
K+ N L GL + LE ++ L N L+ +V +N
Sbjct: 82 IILKLDYNQFL-QLETGAFNGL-ANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 397 NLSGAVPKSL-GNCRTLRTVQLYSNRFSGELPTGLWTTF---NLSSLMLSDNTISGELPS 452
N+ P S N R + L N+ + F + + L LS T+
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEY 198
Query: 453 KTAW----------NLTRLEISNNRFSG-------------QIQRGVGSWKNLIVFKASN 489
W ++T L++S N F +IQ + S + +
Sbjct: 199 WLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGH 258
Query: 490 NLFSGEIPVELTSL--SHLNTLLLDGNKLSGKLPSQIVSW-TSLNNLNLARNELSGEIPK 546
F L S + T L +K+ L + S T L L LA+NE++ +I
Sbjct: 259 TNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN-KIDD 316
Query: 547 -AIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTFNLSSNKLYGNIPDE-FNNL 598
A L ++ L+LS N I + KL +LS N + + D+ F L
Sbjct: 317 NAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLGL 370
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 6e-06
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 87 QKIPPIICD-LKNLTTIDLSSNSIPGEFPEFL-YNCTKLQNLDLSQNYFVGPIPSDI-DR 143
KI L +L ++LS N + G + N KL+ LDLS N+ +
Sbjct: 312 NKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLG 369
Query: 144 ISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFN 182
+ L+ + L N +P I RL+ LQ ++L+ N ++
Sbjct: 370 LPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 682 LGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA- 740
+ + + ++G G G+V G+ AVK I + R++ QK +KE +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLR 75
Query: 741 EIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQH 799
E+++L + H NI+KL+ + LV E L D + RKR ++ + +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE-IISRKRFSEVDAARIIRQ 134
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKM 856
VL G+ YMH + +I+HRD+K N+LL+S + +I DFGL+
Sbjct: 135 VL-------------SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
+ + M G+ Y APE +EK D++S GV+L L++G
Sbjct: 179 F-EASKK--MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-24
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 684 FTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE 743
+ + ++G G G+V + + AVK I N K + E+E
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVE 73
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLH 802
+L + H NI+KL+ + +S +V E L D + RKR ++ + + V
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDE-IIKRKRFSEHDAARIIKQVF- 131
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKMLAK 859
G+ YMH I+HRD+K NILL+S + KI DFGL+ +
Sbjct: 132 ------------SGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-Q 175
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Q M G+ Y APE +EK D++S GV+L L++G
Sbjct: 176 QNTK--MKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 6e-24
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G V R G A K I N +KL+ + ++ E I ++H NIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 759 CISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
I E+ LV++ + L + + R+ + +S Q +L + +
Sbjct: 73 SIQEESFHYLVFDLVTGGELFED-IVAREFYSEADASHCIQQIL-------------ESI 118
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Y H + I+HR++K N+LL S+ K K+ADFGLA + + AG+ G
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPG 172
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVL 899
Y +PE ++ +DI++ GV+L
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVIL 197
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 6e-24
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 32/222 (14%)
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI 744
+ ++G G G+V + + AVK I N K + E+E+
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVEL 74
Query: 745 LGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHW 803
L + H NI+KL+ + +S +V E L D + RKR ++ + + V
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDE-IIKRKRFSEHDAARIIKQVF-- 131
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKMLAKQ 860
G+ YMH I+HRD+K NILL+S + KI DFGL+
Sbjct: 132 -----------SGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--- 174
Query: 861 GEPHTMSAVAGSFGYFAPE---YAYTTKVNEKIDIYSFGVVL 899
+ M G+ Y APE Y K D++S GV+L
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKC----DVWSAGVIL 212
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 7e-24
Identities = 53/345 (15%), Positives = 111/345 (32%), Gaps = 50/345 (14%)
Query: 38 TILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLK 97
+I+L + + T + + D+ + + + C +
Sbjct: 2 SIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLK--ECLIN 59
Query: 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNF 157
+ + L+ ++ P+ L ++ L+++QN + +P + + L+ +D N
Sbjct: 60 QFSELQLNRLNLS-SLPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRL 112
Query: 158 SGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGM 217
S +P L+ L + N+ P+ LE + N + M+P
Sbjct: 113 S-TLPELPAS---LKHLDVDNNQLT-MLPELPA---LLEYINADNN---QLTMLPEL--- 158
Query: 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L+ L + N + +PE + LE L ++ N LE ++P+ ++ +
Sbjct: 159 PTSLEVLSVRN-NQLTFLPELPES---LEALDVSTNLLE-SLPAVPVRNHHSEET----- 208
Query: 278 ILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
N +T IPE L + L N LS + S+ +
Sbjct: 209 --------------EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253
Query: 338 PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENL 382
A + S + T F ++
Sbjct: 254 TAQPDYHGPRIYFSM--SDGQQNTLHRPLADAVTAWFPENKQSDV 296
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 5e-23
Identities = 66/346 (19%), Positives = 118/346 (34%), Gaps = 70/346 (20%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
+ A + N N + L +N ++L L LS +P ++
Sbjct: 24 GTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLNLS-SLPDNL-P 79
Query: 290 LKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNS 349
++T ++++ N L S+PE L+ L N LS +P LK V NN
Sbjct: 80 PQITVLEITQNALI-SLPELPASLEYLDACD---NRLS-TLPELPAS---LKHLDVDNNQ 131
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
L+ +LP L LE NQ + +P+ +
Sbjct: 132 LT-MLPELPAL---LEYINADNNQLT-------------------------MLPELPTS- 161
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFS 469
L + + +N+ + LP +L +L +S N + LP+ E
Sbjct: 162 --LEVLSVRNNQLT-FLPELP---ESLEALDVSTNLLE-SLPA-VPVRNHHSE------- 206
Query: 470 GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS 529
+ I F+ N + IP + SL T++L+ N LS ++ + T+
Sbjct: 207 ----------ETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255
Query: 530 LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575
+ + R S + + L D F ++ Q+
Sbjct: 256 QPDYHGPRIYFSMSDGQQ--NTLHRPLADAVTAWFPENKQSDVSQI 299
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 8e-22
Identities = 70/403 (17%), Positives = 133/403 (33%), Gaps = 37/403 (9%)
Query: 184 TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLS 243
+ I + +L + A + +K + + E + ++
Sbjct: 2 SIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--IN 59
Query: 244 SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLT 303
L LN +L ++P L +T L + N L +P L +D N L+
Sbjct: 60 QFSELQLNRLNLS-SLPDNLP--PQITVLEITQNALI-SLPELPA--SLEYLDACDNRLS 113
Query: 304 GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSA 363
++PE LK+L + N L+ +P L+ NN L+ +LP +
Sbjct: 114 -TLPELPASLKHLDVDN---NQLT-MLPELPAL---LEYINADNNQLT-MLPELPT---S 161
Query: 364 LEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQ----LYS 419
LE V NQ + LPE L+ + N L ++P +
Sbjct: 162 LEVLSVRNNQLTF-LPELP---ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRE 216
Query: 420 NRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE-ISNNRFSGQIQRGVGS 478
NR + +P + + +++L DN +S ++ T R + G +
Sbjct: 217 NRIT-HIPENILSLDPTCTIILEDNPLS-SRIRESLSQQTAQPDYHGPRIYFSMSDGQQN 274
Query: 479 WKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARN 538
+ + A F +++ + H N S L ++ S N + R
Sbjct: 275 TLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFL-DRLSDTVSARNTSGFRE 333
Query: 539 ELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFN 581
+++ + K S L + + T+N
Sbjct: 334 QVAAWLEKLSAS----AELRQQSFAVAADATESCEDRVALTWN 372
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 99.7 bits (248), Expect = 1e-21
Identities = 57/350 (16%), Positives = 107/350 (30%), Gaps = 80/350 (22%)
Query: 268 NLTQLFLYDNI--LSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSN 324
+L+Q Y+ I + S+ + K + N + E + L L
Sbjct: 12 SLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFSELQLNRL 69
Query: 325 HLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCA 384
+LS +P ++ P + ++ N+L LP +LE + N+ S
Sbjct: 70 NLS-SLPDNLP--PQITVLEITQNALI-SLPELPA---SLEYLDACDNRLS--------- 113
Query: 385 GGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDN 444
+P+ + + L + +N+ + LP L + +N
Sbjct: 114 ----------------TLPELPASLKHLD---VDNNQLT-MLPELP---ALLEYINADNN 150
Query: 445 TISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS 504
++ LP +L L + NN+ + +P SL
Sbjct: 151 QLT-MLPELPT-SLEVLSVRNNQLT-------------------------FLPELPESLE 183
Query: 505 HLNTLLLDGNKLSGKLPSQIVSWTSLNN----LNLARNELSGEIPKAIGSLLVMVSLDLS 560
L+ + N L LP+ V N ++ IP+ I SL ++ L
Sbjct: 184 ALD---VSTNLLES-LPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238
Query: 561 GNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNL 610
N S I + Q + + N L + +
Sbjct: 239 DNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWF 288
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 85.8 bits (212), Expect = 2e-17
Identities = 41/264 (15%), Positives = 82/264 (31%), Gaps = 40/264 (15%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
C N + + L +++ +P + +T ++++ N++ PE L+ LD
Sbjct: 56 CLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNAL-ISLPELP---ASLEYLDAC 108
Query: 130 QNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRL-----------------SELQ 172
N +P + + L+ +D+ N + +P L + L+
Sbjct: 109 DNRLST-LP---ELPASLKHLDVDNNQLT-MLPELPALLEYINADNNQLTMLPELPTSLE 163
Query: 173 TLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMT---EA 229
L + N+ P+ +LE L ++ N +P + +
Sbjct: 164 VLSVRNNQLT-FLPELPE---SLEALDVSTN---LLESLPAVPVRNHHSEETEIFFRCRE 216
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
N I IPE + +L + L N L I L S
Sbjct: 217 NRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMS-DGQQNT 275
Query: 290 LKLTDIDLSMNNLTGSIPEEFGKL 313
L D + + ++
Sbjct: 276 LHRPLADAVTAWFPENKQSDVSQI 299
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-24
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 28/206 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++GSG +V+ + G+ A+K I +K + EI +L I+H NIV L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCI---KKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 758 CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
S LV + + L DR L + S + Q VL
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ-VL-------------SA 118
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEF---KAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ Y+H + I+HRD+K N+L + K I DFGL+KM + MS G+
Sbjct: 119 VKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME----QNGIMSTACGTP 171
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVL 899
GY APE ++ +D +S GV+
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVIT 197
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 8e-24
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G V R AG+ A I N +KL+ + ++ E I ++H NIV+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMII-NTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 759 CISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
IS E L+++ + L + + S S + Q + + +
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL--------------EAV 123
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAGSFG 874
+ H ++HR++K N+LL S+ K K+ADFGLA + +GE AG+ G
Sbjct: 124 LHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV--EGEQQAWFGFAGTPG 178
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVL 899
Y +PE + +D+++ GV+L
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVIL 203
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G G V R G A K I N +KL+ + ++ E I ++H NIV+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 759 CISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
I E+ LV++ + L + + + S + H + QI + +
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIV--AREFY---SEADASHCIQ-----QIL----ESI 141
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAGSFG 874
Y H + I+HR++K N+LL S+ K K+ADFGLA + + AG+ G
Sbjct: 142 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPG 195
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVL 899
Y +PE ++ +DI++ GV+L
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVIL 220
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 1e-23
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+GSG G+V + VA++ I + RK +E EIEIL + H
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
I+K+ +E+ +V E ME L + G KR + +L
Sbjct: 202 IIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML----------- 249
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKMLAKQGEPHTMSAV 869
+ Y+H + IIHRD+K N+LL S + KI DFG +K+L GE M +
Sbjct: 250 --LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTL 301
Query: 870 AGSFGYFAPE---YAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ Y APE T N +D +S GV+L ++G
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-23
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKE------FIAEIEILGTIRHAN 752
+GSG G+V + VA+K I + RK +E EIEIL + H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 753 IVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
I+K+ +E+ +V E ME L D+ + G KR + +L
Sbjct: 77 IIKIKNFFDAED-YYIVLELMEGGELFDK-VVGNKRLKEATCKLYFYQML---------- 124
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKMLAKQGEPHTMSA 868
+ Y+H + IIHRD+K N+LL S + KI DFG +K+L GE M
Sbjct: 125 ---LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT 175
Query: 869 VAGSFGYFAPE---YAYTTKVNEKIDIYSFGVVL 899
+ G+ Y APE T N +D +S GV+L
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+GSG G V+ ++ +G +K I N + +E+ AEIE+L ++ H NI+K++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTI-NKDRSQVPMEQ-IEAEIEVLKSLDHPNIIKIFE 87
Query: 759 CISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQ--HVLHWPTRLQIAIGAAQ 815
++ +V E E L +R + + S ++ Q+
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIV---SAQARGKALSEGYVAELMK-----QMM----N 135
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAGS 872
L Y H ++H+D+K NIL KI DFGLA++ + AG+
Sbjct: 136 ALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAGT 189
Query: 873 FGYFAPE---YAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE K DI+S GVV+ L+TG
Sbjct: 190 ALYMAPEVFKRDV----TFKCDIWSAGVVMYFLLTG 221
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 38/226 (16%)
Query: 683 GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEI 742
G T+ +I T N IG G G+V G A K+I + F EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI-PKYFVEDV--DRFKQEI 57
Query: 743 EILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVL 801
EI+ ++ H NI++L+ LV E L +R + ++ S ++ + + VL
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFER-VVHKRVFRESDAARIMKDVL 116
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFKAKIADFGLAKMLA 858
+ Y H + HRD+K N L + + K+ DFGLA
Sbjct: 117 -------------SAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF- 159
Query: 859 KQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVL 899
M G+ Y +P+ Y + D +S GV++
Sbjct: 160 --KPGKMMRTKVGTPYYVSPQVLEGLY------GPECDEWSAGVMM 197
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-23
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF------IAEIEILGTIRHA 751
+G G VY+ D N + VA+K+I KL + E + + EI++L + H
Sbjct: 18 LGEGQFATVYKARDKN-TNQIVAIKKI----KLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
NI+ L +++ LV+++ME L+ + L H+ + L
Sbjct: 73 NIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPS------HIKAY--MLMTL- 122
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
QGL Y+H I+HRD+K +N+LLD K+ADFGLAK + +
Sbjct: 123 ---QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYTHQVV 174
Query: 872 SFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE Y V D+++ G +L EL+
Sbjct: 175 TRWYRAPELLFGARMYGVGV----DMWAVGCILAELLLRV 210
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 63/276 (22%), Positives = 99/276 (35%), Gaps = 54/276 (19%)
Query: 62 PCDWPEI-TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNC 120
PC P C S + + +P I I L N I C
Sbjct: 1 PC--PGACVCYNEPKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRAC 55
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNE 180
L L L N ++ + F+G L+ L+ L L N
Sbjct: 56 RNLTILWLHSN-----------VLARID-----AAAFTG--------LALLEQLDLSDNA 91
Query: 181 F-----NGTFPKEIGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIG 233
TF L L L L P + F L L+ L++ + N +
Sbjct: 92 QLRSVDPATF----HGLGRLHTLHLDRCGLQELGPGL----FRGLAALQYLYLQD-NALQ 142
Query: 234 EIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV-EAL 290
+P+ +L +L L L+GN + ++P F L++L +L L+ N ++ + L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDL 200
Query: 291 -KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSN 324
+L + L NNL+ ++P E L+ LQ L L N
Sbjct: 201 GRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 7e-21
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 16/215 (7%)
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
+P I + Q ++L+ N + NL +L L N A
Sbjct: 16 TSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSN---VLA 69
Query: 210 MIPIE-FGMLKKLKTLWMTEANLIGEIP-EAMSNLSSLEILALNGNHLEGAIPSGLFL-L 266
I F L L+ L +++ + + L L L L+ L+ + GLF L
Sbjct: 70 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGL 128
Query: 267 NNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFS 323
L L+L DN L +P L LT + L N ++ S+PE F L +L L L
Sbjct: 129 AALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQ 186
Query: 324 NHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
N ++ P + + L +F N+LS LP E
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEA 220
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 6e-13
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 12/198 (6%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKT 454
N +S S CR L + L+SN + + +T L L LSDN + T
Sbjct: 42 NRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRSVDPAT 100
Query: 455 AWNLTRLE---ISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTL 509
L RL + ++ G+ L +N +P + L +L L
Sbjct: 101 FHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHL 158
Query: 510 LLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 569
L GN++S SL+ L L +N ++ P A L +++L L N S +P
Sbjct: 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALP 217
Query: 570 PEI--GQLKLNTFNLSSN 585
E L L+ N
Sbjct: 218 TEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 47/213 (22%), Positives = 72/213 (33%), Gaps = 17/213 (7%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
+ L AVP + + + L+ NR S NL+ L L N ++ + +
Sbjct: 20 QQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAA 75
Query: 455 AWNLTRLEI---SNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTL 509
L LE S+N + L E+ L+ L L
Sbjct: 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYL 134
Query: 510 LLDGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEI 568
L N L LP +L +L L N +S +A L + L L N+ + +
Sbjct: 135 YLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HV 192
Query: 569 PPEI--GQLKLNTFNLSSNKLYGNIPDE-FNNL 598
P +L T L +N L +P E L
Sbjct: 193 HPHAFRDLGRLMTLYLFANNL-SALPTEALAPL 224
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-23
Identities = 51/242 (21%), Positives = 92/242 (38%), Gaps = 51/242 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G V + +G+ A+K++ + + + E++I+ + H NI+KL
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR-------ELDIMKVLDHVNIIKLVD 67
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSS-------------------VHQH 799
+ + + + S +H+
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 800 VLHWPTRLQ-IAIGAAQ--------GLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIA 849
+ + + I + + ++H + I HRD+K N+L++S+ K+
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLC 184
Query: 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVT 904
DFG AK L EP + + S Y APE YT ID++S G V EL+
Sbjct: 185 DFGSAKKLIP-SEPSV-AYIC-SRFYRAPELMLGATEYTP----SIDLWSIGCVFGELIL 237
Query: 905 GK 906
GK
Sbjct: 238 GK 239
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-23
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 666 KRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRI- 724
+ N + + E I S + +GSG G+V A+K I
Sbjct: 11 RENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIK 70
Query: 725 ---------WNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 775
++ K +K +E EI +L ++ H NI+KL+ + LV E+ E
Sbjct: 71 KSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEG 130
Query: 776 QSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 834
L ++ + R + ++++ + +L G+CY+H I+HRD+K
Sbjct: 131 GELFEQ-IINRHKFDECDAANIMKQIL-------------SGICYLHKH---NIVHRDIK 173
Query: 835 SSNILLDS---EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKID 891
NILL++ KI DFGL+ + + G+ Y APE K NEK D
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFF-SKDYK--LRDRLGTAYYIAPE-VLKKKYNEKCD 229
Query: 892 IYSFGVVLLELVTG 905
++S GV++ L+ G
Sbjct: 230 VWSCGVIMYILLCG 243
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 25/266 (9%)
Query: 74 SVTGISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY 132
T + L++ DI+ ++ L++L + L +N I + KLQ L +S+N+
Sbjct: 55 DTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 133 FVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF-NGTFPKEIGD 191
V IP ++ S L + + N L + + + N N F D
Sbjct: 114 LVE-IPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILAL 250
L L ++ K IP + + L L + + N I I + S L L L
Sbjct: 171 GLKLNYLRISEA---KLTGIP--KDLPETLNELHL-DHNKIQAIELEDLLRYSKLYRLGL 224
Query: 251 NGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPE 308
N + I +G L L +L L +N LS +P+ + LK L + L NN+T +
Sbjct: 225 GHNQIR-MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGV 281
Query: 309 E-------FGKLKNLQLLGLFSNHLS 327
K + LF+N +
Sbjct: 282 NDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 62/316 (19%), Positives = 111/316 (35%), Gaps = 41/316 (12%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE 196
+P +I +DL N+ S L L L L N+ + K L L+
Sbjct: 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 197 VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHL 255
L ++ N ++ I + L L + N I ++P+ S L ++ + + GN L
Sbjct: 106 KLYISKNH-----LVEIPPNLPSSLVELRI-HDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159
Query: 256 -EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEE-FGKL 313
G F L L + + L+ IP + L ++ L N + +I E +
Sbjct: 160 ENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLPE-TLNELHLDHNKIQ-AIELEDLLRY 216
Query: 314 KNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQ 373
L LGL N + S+ +P L++ + NN LS +P + L+ + TN
Sbjct: 217 SKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNN 275
Query: 374 FSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLWT 432
+ + N V + L++N E+
Sbjct: 276 ITK-VGVN-----DFCPVGFGVKRAY------------YNGISLFNNPVPYWEVQPA--- 314
Query: 433 TF----NLSSLMLSDN 444
TF + ++ +
Sbjct: 315 TFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 8e-15
Identities = 52/250 (20%), Positives = 97/250 (38%), Gaps = 16/250 (6%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT- 454
N +S K+ R L+ + + N E+P L + +L L + DN I ++P
Sbjct: 88 NKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPS--SLVELRIHDNRIR-KVPKGVF 143
Query: 455 --AWNLTRLEISNNRF-SGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
N+ +E+ N + + G L + S + IP +L LN L L
Sbjct: 144 SGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHL 200
Query: 512 DGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP 570
D NK+ + + + ++ L L L N++ ++ L + L L N+ S +P
Sbjct: 201 DHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258
Query: 571 EIGQLK-LNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV-KNPIINLPKCPSRFRN 628
+ LK L L +N + ++F + + + + + NP+ P+ FR
Sbjct: 259 GLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318
Query: 629 SDKISSKHLA 638
+
Sbjct: 319 VTDRLAIQFG 328
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-08
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 435 NLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFS 493
+L + SD + +P + + + T L++ NN S ++++ ++L NN S
Sbjct: 34 HLRVVQCSDLGLK-AVPKEISPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKIS 91
Query: 494 GEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPK-AIGSL 551
+I + + L L L + N L ++P + S SL L + N + ++PK L
Sbjct: 92 -KIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPS--SLVELRIHDNRIR-KVPKGVFSGL 146
Query: 552 LVMVSLDLSGNQF-SGEIPPEI-GQLKLNTFNLSSNKLYGNIPDEFNNL 598
M +++ GN + P LKLN +S KL G D L
Sbjct: 147 RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETL 195
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-23
Identities = 71/316 (22%), Positives = 112/316 (35%), Gaps = 59/316 (18%)
Query: 47 LGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDIT---QKIPPIICDLKNLTTID 103
+G S + S C +C N + + K++ I N ++
Sbjct: 23 MGCVAETGSAQTCPSVC-----SC-SNQFSKVICVRKNLREVPDGIST------NTRLLN 70
Query: 104 LSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPR 163
L N I + L+ L LS+N I ++ F+G
Sbjct: 71 LHENQIQIIKVNSFKHLRHLEILQLSRN-----------HIRTIE-----IGAFNG---- 110
Query: 164 SIGRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGML 218
L+ L TL L+ N NG F LS L+ L L N IP F +
Sbjct: 111 ----LANLNTLELFDNRLTTIPNGAF----VYLSKLKELWLRNN---PIESIPSYAFNRI 159
Query: 219 KKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L+ L + E + I E A LS+L L L +L IP+ L L L +L L N
Sbjct: 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGN 217
Query: 278 ILSGEIPSSVEA--LKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI 334
LS I + L + + + + I F L++L + L N+L+
Sbjct: 218 HLS-AIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275
Query: 335 GKIPALKKFKVFNNSL 350
+ L++ + +N
Sbjct: 276 TPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-23
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDL 192
+P I + + ++L N S L L+ L L N G F L
Sbjct: 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF----NGL 111
Query: 193 SNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM-SNLSSLEILA 249
+NL L L N + F L KLK LW+ N I IP + + SL L
Sbjct: 112 ANLNTLELFDNRLTTIPNGA----FVYLSKLKELWL-RNNPIESIPSYAFNRIPSLRRLD 166
Query: 250 L-NGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIP 307
L L I G F L+NL L L L EIP+ +KL ++DLS N+L+ +I
Sbjct: 167 LGELKRLS-YISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLS-AIR 223
Query: 308 EE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
F L +LQ L + + + + + +L + + +N+L+ +LP ++
Sbjct: 224 PGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 64/327 (19%), Positives = 106/327 (32%), Gaps = 67/327 (20%)
Query: 221 LKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280
L + E P S + + +L +P G+ N L L++N +
Sbjct: 21 LLMGCVAETGSAQTCPSVCSCSNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQ 77
Query: 281 GEIPSSVEALK-LTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKI 337
+S + L+ L + LS N++ +I F L NL L LF N L+ +P +
Sbjct: 78 IIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYL 135
Query: 338 PALKKFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFE 395
LK+ + NN + +P + S L ++
Sbjct: 136 SKLKELWLRNNPIE-SIPSYAFNRIPS-LRRLDLGEL----------------------- 170
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 455
LS + LR + L E+P L L L LS N +S + +
Sbjct: 171 KRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLS-AIRPGSF 227
Query: 456 WNLTRLE---ISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLD 512
L L+ + ++ I+R F L L + L
Sbjct: 228 QGLMHLQKLWMIQSQIQ-VIERNA---------------FDN--------LQSLVEINLA 263
Query: 513 GNKLSGKLPSQIV-SWTSLNNLNLARN 538
N L+ LP + L ++L N
Sbjct: 264 HNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 5e-13
Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 20/202 (9%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF----NLSSLMLSDNTISGEL 450
N++ + L T++L+ NR + +P G F L L L +N I +
Sbjct: 97 RNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNG---AFVYLSKLKELWLRNNPIE-SI 151
Query: 451 PSKTAWNLTRLEI----SNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVELTSLSH 505
PS + L R S I G NL + EIP LT L
Sbjct: 152 PSYAFNRIPSLRRLDLGELKRLS-YISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIK 208
Query: 506 LNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
L+ L L GN LS P L L + ++++ A +L +V ++L+ N +
Sbjct: 209 LDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
Query: 566 GEIPPEIGQL--KLNTFNLSSN 585
+P ++ L +L N
Sbjct: 269 -LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 15/128 (11%)
Query: 496 IPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMV 555
I L+ L N++ + L L L+RN + A L +
Sbjct: 62 ISTNTRLLN------LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115
Query: 556 SLDLSGNQFSGEIPPEI--GQLKLNTFNLSSNKLYGNIPDE-FNNLAYDDSFLNNSNLCV 612
+L+L N+ + IP KL L +N + +IP FN + L +L
Sbjct: 116 TLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPI-ESIPSYAFNRI----PSLRRLDLGE 169
Query: 613 KNPIINLP 620
+ +
Sbjct: 170 LKRLSYIS 177
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRI------WNNRKLNQKLEKEFIAEIEILGTI-RHA 751
+G G S V R + AVK I + + Q+L + + E++IL + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
NI++L + LV++ M+ L D L + + + + +L
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDY-LTEKVTLSEKETRKIMRALL--------- 134
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ +C +H I+HRD+K NILLD + K+ DFG + L + V
Sbjct: 135 ----EVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVC 184
Query: 871 GSFGYFAPE------YAYTTKVNEKIDIYSFGVVL 899
G+ Y APE +++D++S GV++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDL 192
+P I S + ++L NN + L L+ L L N G F L
Sbjct: 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF----NGL 122
Query: 193 SNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM-SNLSSLEILA 249
++L L L N + F L KL+ LW+ N I IP + + SL L
Sbjct: 123 ASLNTLELFDNWLTVIPSGA----FEYLSKLRELWLRN-NPIESIPSYAFNRVPSLMRLD 177
Query: 250 L-NGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIP 307
L LE I G F L NL L L + ++P+ + L ++++S N+ I
Sbjct: 178 LGELKKLE-YISEGAFEGLFNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNHFP-EIR 234
Query: 308 EE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
F L +L+ L + ++ +S + + +L + + +N+LS LP ++
Sbjct: 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDL 285
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 4e-22
Identities = 63/308 (20%), Positives = 111/308 (36%), Gaps = 51/308 (16%)
Query: 53 LQSWTSTSSPCDWPEI-TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPG 111
+ ++ C P + +C+ + + +++ +P I N ++L N+I
Sbjct: 36 AAAASAGPQNC--PSVCSCSNQFSK-VVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQM 89
Query: 112 EFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSEL 171
+ + L+ L L +N I ++ F+G L+ L
Sbjct: 90 IQADTFRHLHHLEVLQLGRN-----------SIRQIE-----VGAFNG--------LASL 125
Query: 172 QTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWM 226
TL L+ N +G F LS L L L N IP F + L L +
Sbjct: 126 NTLELFDNWLTVIPSGAF----EYLSKLRELWLRNN---PIESIPSYAFNRVPSLMRLDL 178
Query: 227 TEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPS 285
E + I E A L +L+ L L +++ +P+ L L L +L + N EI
Sbjct: 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEELEMSGNHFP-EIRP 235
Query: 286 SVEA--LKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKK 342
L + + + ++ I F L +L L L N+LS + L +
Sbjct: 236 GSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVE 294
Query: 343 FKVFNNSL 350
+ +N
Sbjct: 295 LHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 8e-13
Identities = 61/300 (20%), Positives = 107/300 (35%), Gaps = 53/300 (17%)
Query: 267 NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
N +++ LS E+P + + ++L NN+ + F L +L++L L N +
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGIPS-NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 327 SGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGG 386
+ + +L ++F+N L+ + + F L +
Sbjct: 112 RQIEVGAFNGLASLNTLELFDNWLT----------------VIPSGAFEY-LSK------ 148
Query: 387 VLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWT-TFNLSSLMLSDNT 445
L+ + N + + +L + L + + G + FNL L L
Sbjct: 149 -LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207
Query: 446 ISGELPS-KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS 504
I ++P+ L LE+S N F +I+ G F G LS
Sbjct: 208 IK-DMPNLTPLVGLEELEMSGNHFP-EIRPGS---------------FHG--------LS 242
Query: 505 HLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564
L L + +++S + SL LNLA N LS L +V L L N +
Sbjct: 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 9e-13
Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 20/202 (9%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF----NLSSLMLSDNTISGEL 450
N++ + +L T++L+ N + +P+G F L L L +N I +
Sbjct: 108 RNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSG---AFEYLSKLRELWLRNNPIE-SI 162
Query: 451 PSKTAWNLTRLEI----SNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVELTSLSH 505
PS + L + I G NL ++P LT L
Sbjct: 163 PSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVG 219
Query: 506 LNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
L L + GN P +SL L + +++S A L +V L+L+ N S
Sbjct: 220 LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279
Query: 566 GEIPPEI--GQLKLNTFNLSSN 585
+P ++ L +L N
Sbjct: 280 -SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-04
Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 11/106 (10%)
Query: 496 IPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMV 555
IP L+ L N + L L L RN + A L +
Sbjct: 73 IPSNTRYLN------LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN 126
Query: 556 SLDLSGNQFSGEIPPEI--GQLKLNTFNLSSNKLYGNIPDE-FNNL 598
+L+L N + IP KL L +N + +IP FN +
Sbjct: 127 TLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPI-ESIPSYAFNRV 170
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 2e-22
Identities = 65/246 (26%), Positives = 92/246 (37%), Gaps = 40/246 (16%)
Query: 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153
C N IP P +NLDLS N LQ +DL
Sbjct: 14 CMELNFY-------KIPDNLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 60
Query: 154 GNNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKP 208
I LS L TL L N G F LS+L+ L
Sbjct: 61 RCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG----LSSLQKLVAVET---NL 112
Query: 209 AMIPIE-FGMLKKLKTLWMTEANLIGEIPE--AMSNLSSLEILALNGNHLEGAIPSGLFL 265
A + G LK LK L + NLI SNL++LE L L+ N ++ +I
Sbjct: 113 ASLENFPIGHLKTLKELNVAH-NLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLR 170
Query: 266 -LNNLT----QLFLYDNILSGEIPSSV-EALKLTDIDLSMNNLTGSIPEE-FGKLKNLQL 318
L+ + L L N ++ I + ++L ++ L N L S+P+ F +L +LQ
Sbjct: 171 VLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQK 228
Query: 319 LGLFSN 324
+ L +N
Sbjct: 229 IWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 7e-09
Identities = 41/215 (19%), Positives = 80/215 (37%), Gaps = 41/215 (19%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWT-TFNLSSLMLSDN---TISGELP 451
N L S + L+ + L + G + +LS+L+L+ N +++
Sbjct: 38 NPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAF 96
Query: 452 SKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
S + +L +L + ++ L L L +
Sbjct: 97 SGLS-SLQKLVAVETNLA-SLENFP---------------IGH--------LKTLKELNV 131
Query: 512 DGNKLSGKLPSQIV--SWTSLNNLNLARNELSGEIPKAIGSL----LVMVSLDLSGNQFS 565
N + + T+L +L+L+ N++ + L L+ +SLDLS N +
Sbjct: 132 AHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
Query: 566 GEIPPEI-GQLKLNTFNLSSNKLYGNIPDE-FNNL 598
I P +++L L +N+L ++PD F+ L
Sbjct: 191 -FIQPGAFKEIRLKELALDTNQL-KSVPDGIFDRL 223
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 45/286 (15%), Positives = 73/286 (25%), Gaps = 83/286 (29%)
Query: 283 IPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKK 342
+P S + L DLS N L F LQ+L L + I
Sbjct: 26 LPFSTKNL-----DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ--------TIED--- 69
Query: 343 FKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAV 402
+ + S L ++ N +L+
Sbjct: 70 -GAYQS------------LSHLSTLILTGNPIQ---------------------SLALGA 95
Query: 403 PKSLGNCRTLRTVQLYSNRFSGELPTGLWTT-FNLSSLMLSDNTISGELPSKTA----WN 457
L + L+ + + L L L ++ N I N
Sbjct: 96 FSGLSS---LQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLTN 150
Query: 458 LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN-TLLLDGNKL 516
L L++S+N+ I L + LN +L L N +
Sbjct: 151 LEHLDLSSNKIQ-SIYCTD---------------LRV-----LHQMPLLNLSLDLSLNPM 189
Query: 517 SGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGN 562
+ + L L L N+L L + + L N
Sbjct: 190 N-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-22
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 697 NLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF----------IAEIEIL 745
IG G G VY+ D + +G FVA+K + ++ + E+ +L
Sbjct: 15 AEIGVGAYGTVYKARDPH-SGHFVALKSV--------RVPNGGGGGGGLPISTVREVALL 65
Query: 746 ---GTIRHANIVKLWCCISSENSKL-----LVYEYMENQSLDRWLHGRKRSLVSGS---S 794
H N+V+L ++ + LV+E+++ Q L +L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKD 124
Query: 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+ Q L +GL ++H + I+HRD+K NIL+ S K+ADFGLA
Sbjct: 125 LMRQ-FL-------------RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 167
Query: 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
++ ++ V + Y APE + +D++S G + E+ K
Sbjct: 168 RIY---SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 4e-22
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK--LEKEFIAEIEILGTIRHANIVK 755
L+G G G+V + + AVK I +KL + E EI++L +RH N+++
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVK-ILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 756 LWCCISSENSK--LLVYEYMENQS---LDRWLHGRK---------RSLVSGSSSVHQHVL 801
L + +E + +V EY LD R L+ G
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG--------- 121
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
L Y+H I+H+D+K N+LL + KI+ G+A+ L
Sbjct: 122 ---------------LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 862 EPHTMSAVAGSFGYFAPEYAYTTKVNE--KIDIYSFGVVLLELVTGK 906
T GS + PE A K+DI+S GV L + TG
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 4e-22
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 52/231 (22%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEF-------IAEIEILGTIRH 750
IG G G+V++ G+ VA+K++ +E E + EI+IL ++H
Sbjct: 25 IGQGTFGEVFKARHRK-TGQKVALKKV--------LMENEKEGFPITALREIKILQLLKH 75
Query: 751 ANIVKLWCCISSENSKL--------LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
N+V L ++ S LV+++ E L L + S + V+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKF---TLSEIKRVMQ 131
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM--LAKQ 860
+ GL Y+H + +I+HRD+K++N+L+ + K+ADFGLA+ LAK
Sbjct: 132 -----MLL----NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 861 GEPHTMSAVAGSFGYFAPEY-----AYTTKVNEKIDIYSFGVVLLELVTGK 906
+P+ + + Y PE Y + D++ G ++ E+ T
Sbjct: 180 SQPNRYTNRVVTLWYRPPELLLGERDYGPPI----DLWGAGCIMAEMWTRS 226
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 4e-22
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVKLW 757
+G G V + G+ A K + R+ Q E + EI +L + ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFL-KKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 758 CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVS--GSSSVHQHVLHWPTRLQIAIGAA 814
+ + +L+ EY + +VS + + +L
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSL-CLPELAEMVSENDVIRLIKQIL------------- 141
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAG 871
+G+ Y+H + I+H D+K NILL S + KI DFG+++ + + + G
Sbjct: 142 EGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHACE--LREIMG 195
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
+ Y APE + D+++ G++ L+T
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 6e-22
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN------QKLEKEFIAEIEILGTIR-HA 751
IG G S V R G AVK + +++ + E IL + H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIM-EVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+I+ L S + LV++ M L D L + + S+ + +L
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDY-LTEKVALSEKETRSIMRSLL--------- 210
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + ++H + I+HRD+K NILLD + +++DFG + L + +
Sbjct: 211 ----EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL---EPGEKLRELC 260
Query: 871 GSFGYFAPE------YAYTTKVNEKIDIYSFGVVL 899
G+ GY APE +++D+++ GV+L
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-21
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 53/226 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
+G G G+V E VAVK I + ++ E I EI I + H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 757 WCCISSENSKLLVYEYMENQSL-DRWL-HGRK---------RSLVSGSSSVHQHVLHWPT 805
+ N + L EY L DR L++G +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI------ 124
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
I HRD+K N+LLD KI+DFGLA +
Sbjct: 125 ---------------------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 866 MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTG 905
++ + G+ Y APE + E +D++S G+VL ++ G
Sbjct: 164 LNKMCGTLPYVAPELLKRREFH-----AEPVDVWSCGIVLTAMLAG 204
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 2e-21
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G + VYR G + A+K + + + E I +L + H NI+KL
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKIVRTE----IGVLLRLSHPNIIKLK 114
Query: 758 CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ LV E + L DR + S + +V Q +L +
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ-IL-------------EA 160
Query: 817 LCYMHHDCTPQIIHRDVKSSNILL---DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ Y+H + I+HRD+K N+L + KIADFGL+K++ M V G+
Sbjct: 161 VAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTP 214
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVL 899
GY APE ++D++S G++
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIIT 240
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 2e-21
Identities = 56/228 (24%), Positives = 87/228 (38%), Gaps = 46/228 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL---EKEFIA-----EIEILGTIRH 750
I SG G V ++ G VA+KR++N + + F+ EI +L H
Sbjct: 30 ISSGSYGAVCAG-VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 751 ANIVKLWCCISSENSKL-----LVYEYMENQSLDRWLHGRKRSLVSGSSSVH-QHVLHWP 804
NI+ L LV E M L + +H ++ + S H Q+ ++
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVI----SPQHIQYFMY-- 141
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
I GL +H ++HRD+ NILL I DF LA+
Sbjct: 142 ---HIL----LGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-- 189
Query: 865 TMSA-VAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ V + Y APE +T +D++S G V+ E+ K
Sbjct: 190 -KTHYVTHRW-YRAPELVMQFKGFTK----LVDMWSAGCVMAEMFNRK 231
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 3e-21
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 47/221 (21%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLW 757
+G G +V+ E V VK L +K+ EI+IL +R NI+ L
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILENLRGGPNIITLA 97
Query: 758 CCISSENSK--LLVYEYMENQSLDRWLHGRKRSLVSGSSSVH-QHVLHWPTRLQIAIGAA 814
+ S+ LV+E++ N + L + + ++ +I
Sbjct: 98 DIVKDPVSRTPALVFEHVNNTDF--------KQLYQTLTDYDIRFYMY-----EIL---- 140
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA-KIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ L Y H + I+HRDVK N+++D E + ++ D+GLA+ G+ + + VA +
Sbjct: 141 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVR-VASRY 195
Query: 874 GYFAPE-------YAYTTKVNEKIDIYSFGVVLLELVTGKE 907
+ PE Y Y+ +D++S G +L ++ KE
Sbjct: 196 -FKGPELLVDYQMYDYS------LDMWSLGCMLASMIFRKE 229
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 3e-21
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IGSG G V VA+K++ + NQ K E+ ++ + H NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLN 91
Query: 759 CISSENSKL------LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + S +V E M+ +L + + L + Q+
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-------MELDHERMSYLLY----QML-- 137
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
G+ ++H + IIHRD+K SNI++ S+ KI DFGLA+ G M+ +
Sbjct: 138 --CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVT 189
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE E +DI+S G ++ E++ G
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 5e-21
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA 751
+++++ ++G G GQV++ + G +A K I + K ++E EI ++ + HA
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKII---KTRGMKDKEEVKNEISVMNQLDHA 146
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSL-DRWLH-GRKRSLVSGSSSVHQHVLHWPTRLQI 809
N+++L+ S+N +LV EY++ L DR + + + + Q +
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-IC-------- 197
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAKQGEPHTMS 867
+G+ +MH I+H D+K NIL + KI DFGLA+ K E +
Sbjct: 198 -----EGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREK--LK 246
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE V+ D++S GV+ L++G
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 5e-21
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 53/226 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
+G G G+V E VAVK I + ++ E I EI I + H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 757 WCCISSENSKLLVYEYMENQSL-DRWL-HGRK---------RSLVSGSSSVHQHVLHWPT 805
+ N + L EY L DR L++G +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI------ 124
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
I HRD+K N+LLD KI+DFGLA +
Sbjct: 125 ---------------------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 866 MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTG 905
++ + G+ Y APE + E +D++S G+VL ++ G
Sbjct: 164 LNKMCGTLPYVAPELLKRREFH-----AEPVDVWSCGIVLTAMLAG 204
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 8e-21
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+GSG G V+R G K I N K EI I+ + H ++ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDK--YTVKNEISIMNQLHHPKLINLHD 115
Query: 759 CISSENSKLLVYEYMENQSL-DRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ +L+ E++ L DR K S + + Q +G
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ-AC-------------EG 161
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L +MH I+H D+K NI+ +++ + KI DFGLA L E + +
Sbjct: 162 LKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEI--VKVTTATAE 215
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
+ APE V D+++ GV+ L++G
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 9e-21
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 699 IGSGGSGQVY--RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G VY + + A+K+I + EI +L ++H N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI---EGTG--ISMSACREIALLRELKHPNVISL 83
Query: 757 W-CCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR----LQIA 810
+S + K+ L+++Y E L + + ++ L QI
Sbjct: 84 QKVFLSHADRKVWLLFDYAE-HDLWHIIK----FHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEPHT- 865
G+ Y+H + ++HRD+K +NIL+ E KIAD G A++ +P
Sbjct: 139 ----DGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 866 MSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ V +F Y APE YT + DI++ G + EL+T +
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAI----DIWAIGCIFAELLTSE 233
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 1e-20
Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 30/216 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIRHANIV 754
+GSG V + G A K I R+ E+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 755 KLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L + +L+ E + L D S +S + Q +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL------------- 125
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEPHTMSAV 869
G+ Y+H +I H D+K NI+L + K+ DFGLA + + G +
Sbjct: 126 -DGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVE--FKNI 178
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE + + D++S GV+ L++G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 68/227 (29%), Positives = 97/227 (42%), Gaps = 54/227 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
+G G G+V + G VAVK I N +K+ I EI+ L RH +I+KL
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 757 WCCISSENSKLLVYEYMENQSL-DRWL-HGRK---------RSLVSGSSSVHQHVLHWPT 805
+ IS+ +V EY+ L D HGR + ++S H+H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH------ 130
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++HRD+K N+LLD+ AKIADFGL+ M++ T
Sbjct: 131 ---------------------MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169
Query: 866 MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
GS Y APE YA ++DI+S GV+L L+ G
Sbjct: 170 ---SCGSPNYAAPEVISGRLYA-----GPEVDIWSCGVILYALLCGT 208
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 1e-20
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 25/243 (10%)
Query: 666 KRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIW 725
N WK + ++L +G+G G V+R+ G A K +
Sbjct: 132 YDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV- 190
Query: 726 NNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSL-DRWLHG 784
++ ++ EI+ + +RH +V L +N +++YE+M L ++
Sbjct: 191 --MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE 248
Query: 785 RKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 844
+ + + V +GLC+MH + +H D+K NI+ ++
Sbjct: 249 HNKMSEDEAVEYMRQVC-------------KGLCHMHEN---NYVHLDLKPENIMFTTKR 292
Query: 845 KA--KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 902
K+ DFGL L + + G+ + APE A V D++S GV+ L
Sbjct: 293 SNELKLIDFGLTAHL-DPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Query: 903 VTG 905
++G
Sbjct: 350 LSG 352
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 2e-20
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 30/216 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIRHANIV 754
+GSG V + G A K I R+ E+ IL + H NI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 755 KLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L + +L+ E + L D S +S + Q +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL------------- 125
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSE----FKAKIADFGLAKMLAKQGEPHTMSAV 869
G+ Y+H +I H D+K NI+L + K+ DFGLA + + G +
Sbjct: 126 -DGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVE--FKNI 178
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE + + D++S GV+ L++G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 3e-20
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 29/253 (11%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ I+ ++T + DL +TT+ + E + L L+L N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKDN 73
Query: 132 YFVGPIPSDIDRISG---LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
+D+ + + ++L GN ++ +I L ++TL L + P
Sbjct: 74 QI-----TDLAPLKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVTP-- 124
Query: 189 IGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
+ LSNL+VL L N +N P L L+ L + + ++ ++NLS L
Sbjct: 125 LAGLSNLQVLYLDLNQITNISP------LAGLTNLQYLSIGN-AQVSDL-TPLANLSKLT 176
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI 306
L + N + S L L NL ++ L +N +S ++ L + L+ +T
Sbjct: 177 TLKADDNKISDI--SPLASLPNLIEVHLKNNQIS-DVSPLANTSNLFIVTLTNQTITNQP 233
Query: 307 PEEFGKLKNLQLL 319
L ++
Sbjct: 234 VFYNNNLVVPNVV 246
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 7e-18
Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 33/254 (12%)
Query: 104 LSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPR 163
+I FP + ++ + + G+ + G + I
Sbjct: 4 TQPTAINVIFP--DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE- 57
Query: 164 SIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKL 221
+ L+ L L L N+ T + +L+ + L L+ N N L+ +
Sbjct: 58 GVQYLNNLIGLELKDNQI--TDLAPLKNLTKITELELSGNPLKNVSA------IAGLQSI 109
Query: 222 KTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSG 281
KTL +T I ++ ++ LS+L++L L+ N + S L L NL L + + +
Sbjct: 110 KTLDLTS-TQITDV-TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQV-- 163
Query: 282 EIPSSVEAL----KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
S + L KLT + N ++ I L NL + L +N +S P +
Sbjct: 164 ---SDLTPLANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSP--LANT 216
Query: 338 PALKKFKVFNNSLS 351
L + N +++
Sbjct: 217 SNLFIVTLTNQTIT 230
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 5e-17
Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 29/261 (11%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ +T +S +T I + L NL ++L N I L N TK+ L+LS N
Sbjct: 40 LDGITTLSAFGTGVT-TIEGV-QYLNNLIGLELKDNQI--TDLAPLKNLTKITELELSGN 95
Query: 132 YFVGPIPSDIDRISG---LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
++ I+G ++ +DL + D+ + LS LQ LYL +N+ T
Sbjct: 96 PL-----KNVSAIAGLQSIKTLDLTSTQIT-DVT-PLAGLSNLQVLYLDLNQI--TNISP 146
Query: 189 IGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
+ L+NL+ L + S+ P L KL TL + N I +I +++L +L
Sbjct: 147 LAGLTNLQYLSIGNAQVSDLTP------LANLSKLTTLKADD-NKISDIS-PLASLPNLI 198
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI 306
+ L N + S L +NL + L + ++ P + + +
Sbjct: 199 EVHLKNNQISDV--SPLANTSNLFIVTLTNQTIT-NQPVFYNNNLVVPNVVKGPSGAPIA 255
Query: 307 PEEFGKLKNLQLLGLFSNHLS 327
P L N S
Sbjct: 256 PATISDNGTYASPNLTWNLTS 276
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 8e-12
Identities = 62/326 (19%), Positives = 123/326 (37%), Gaps = 48/326 (14%)
Query: 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L + ++N+ + + ++L + L+ G + G+ LNNL L L DN
Sbjct: 18 LANAIKIAAGKSNVTDTVTQ--ADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDN 73
Query: 278 ILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
++ ++ K+T+++LS N L L++++ L L S ++ P + +
Sbjct: 74 QIT-DLAPLKNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDVTP--LAGL 128
Query: 338 PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENN 397
L+ + N ++ + + + L+ + Q S +
Sbjct: 129 SNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVS---------------------D 165
Query: 398 LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWN 457
L+ L N L T++ N+ S ++ L + NL + L +N IS P N
Sbjct: 166 LTP-----LANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSPLANTSN 218
Query: 458 LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLS 517
L + ++N + Q V NL+V N+ G + + + L+
Sbjct: 219 LFIVTLTNQTITNQP---VFYNNNLVV----PNVVKGPSGAPIAPATISDNGTYASPNLT 271
Query: 518 GKLPSQI--VSWTSLNNLNLARNELS 541
L S I VS+T ++ +
Sbjct: 272 WNLTSFINNVSYTFNQSVTFKNTTVP 297
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 39/214 (18%), Positives = 80/214 (37%), Gaps = 11/214 (5%)
Query: 404 KSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI 463
+ + L ++L N+ + L ++ L LS N + ++ L++
Sbjct: 57 EGVQYLNNLIGLELKDNQITD--LAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDL 114
Query: 464 SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 523
++ + + + NL V N + I L L++L L + ++S L
Sbjct: 115 TSTQITDVT--PLAGLSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVS-DLTP- 168
Query: 524 IVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLS 583
+ + + L L N++S +I + SL ++ + L NQ S ++ P L L+
Sbjct: 169 LANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQIS-DVSPLANTSNLFIVTLT 225
Query: 584 SNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPII 617
+ + NNL + S + I
Sbjct: 226 NQTITNQPVFYNNNLVVPNVVKGPSGAPIAPATI 259
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 3e-20
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 53/226 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
+G G G+V + VA+K + + L + + EI L +RH +I+KL
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 757 WCCISSENSKLLVYEYMENQSLDRWL-HGRK---------RSLVSGSSSVHQHVLHWPTR 806
+ I++ ++V EY + D + R + ++ H+H
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH------- 127
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
+I+HRD+K N+LLD KIADFGL+ ++ T
Sbjct: 128 --------------------KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT- 166
Query: 867 SAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
GS Y APE YA ++D++S G+VL ++ G+
Sbjct: 167 --SCGSPNYAAPEVINGKLYA-----GPEVDVWSCGIVLYVMLVGR 205
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 4e-20
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
IGSG G V VA+K++ + NQ K E+ ++ + H NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 759 CISSENSKL------LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ + + LV E M+ L + + L + Q+
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDAN-----LC---QVIQMELDHERMSYLLY----QML-- 174
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
G+ ++H + IIHRD+K SNI++ S+ KI DFGLA+ G M+ +
Sbjct: 175 --CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVT 226
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE E +DI+S G ++ E+V K
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 4e-20
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 30/206 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLW 757
+G G + + + AVK I ++++ +KE I L H NIVKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKE----ITALKLCEGHPNIVKLH 72
Query: 758 CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ LV E + L +R + S S + + V
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLV--------------SA 118
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAVAGSF 873
+ +MH ++HRD+K N+L E KI DFG A++ +P + +
Sbjct: 119 VSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTL 173
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVL 899
Y APE +E D++S GV+L
Sbjct: 174 HYAAPELLNQNGYDESCDLWSLGVIL 199
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 5e-20
Identities = 55/231 (23%), Positives = 83/231 (35%), Gaps = 60/231 (25%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVK-----RIWNNRKLNQKLEKEFIAEIEILGTIRHANI 753
+GSG G V+ + V VK ++ + + + EI IL + HANI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 754 VKLWCCISSENSKLLVYEY-----------MENQSLDRWLHGRK--RSLVSGSSSVHQHV 800
+K+ ++ LV E + LD L R LVS +
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPL-ASYIFRQLVSAVGYLRLK- 149
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
IIHRD+K NI++ +F K+ DFG A L +
Sbjct: 150 --------------------------DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183
Query: 861 GEPHTMSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTG 905
+T G+ Y APE Y +++++S GV L LV
Sbjct: 184 KLFYT---FCGTIEYCAPEVLMGNPYR-----GPELEMWSLGVTLYTLVFE 226
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 6e-20
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 30/212 (14%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKLW 757
+G G G V+R + + K + + + ++ + EI IL RH NI+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFV---KV--KGTDQVLVKKEISILNIARHRNILHLH 67
Query: 758 CCISSENSKLLVYEYMENQSL-DRWL-HGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
S ++++E++ + +R + + S VHQ V +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ-VC-------------E 113
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAKQGEPHTMSAVAGSF 873
L ++H I H D++ NI+ + + KI +FG A+ L K G+ + +
Sbjct: 114 ALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDN--FRLLFTAP 167
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
Y+APE V+ D++S G ++ L++G
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 7e-20
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 18/210 (8%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G G V A+K + + + E +++ + H VKL+
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQG 816
+ Y +N L +++ RK GS TR A I +A
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI--RK----IGSFDETC------TRFYTAEIVSA-- 142
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H IIHRD+K NILL+ + +I DFG AK+L+ + + ++ G+ Y
Sbjct: 143 LEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 199
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+PE + D+++ G ++ +LV G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 94.0 bits (233), Expect = 7e-20
Identities = 56/305 (18%), Positives = 101/305 (33%), Gaps = 37/305 (12%)
Query: 87 QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG 146
++I P +L S+ + + + + DI + G
Sbjct: 12 KQIFPD-DAFAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNS--------DIKSVQG 60
Query: 147 LQC------IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGL 200
+Q + L GN + DI + L L L+L N+ + DL L+ L L
Sbjct: 61 IQYLPNVTKLFLNGNKLT-DIK-PLTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSL 116
Query: 201 AYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGA 258
+N S+ L +L++L++ N I +I +S L+ L+ L+L N +
Sbjct: 117 EHNGISDING------LVHLPQLESLYLGN-NKITDI-TVLSRLTKLDTLSLEDNQISDI 168
Query: 259 IPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQL 318
L L L L+L N +S ++ + L ++L L
Sbjct: 169 --VPLAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 225
Query: 319 LGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPL 378
+ L P I +K V + L + + +F G +
Sbjct: 226 VKNTDGSL--VTPEIISDDGDYEKPNVKWH-LPEFTNEVSFIFYQPVTIGKAKARFHGRV 282
Query: 379 PENLC 383
+ L
Sbjct: 283 TQPLK 287
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 70.9 bits (173), Expect = 1e-12
Identities = 65/369 (17%), Positives = 125/369 (33%), Gaps = 79/369 (21%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
I +I + L + A+ LN++ Q+ ++ + SV+
Sbjct: 9 TPIKQI-FPDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-----SVQG 60
Query: 290 L----KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKV 345
+ +T + L+ N LT I + LKNL L L N + + +LK K
Sbjct: 61 IQYLPNVTKLFLNGNKLT-DI-KPLTNLKNLGWLFLDENKIK--------DLSSLKDLK- 109
Query: 346 FNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKS 405
L+ + N S +++G
Sbjct: 110 -----------------KLKSLSLEHNGIS---------------------DING----- 126
Query: 406 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISN 465
L + L ++ L +N+ + T L L +L L DN IS +P L L +S
Sbjct: 127 LVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSK 184
Query: 466 NRFSGQIQ--RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTL-LLDGNKLSGKLPS 522
N I R + KNL V + + + ++L NT+ DG+ ++ P
Sbjct: 185 N----HISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT---PE 237
Query: 523 QIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNL 582
I N+ + L + V++ + +F G + + ++ ++++
Sbjct: 238 IISDDGDYEKPNVKWH-LPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDV 296
Query: 583 SSNKLYGNI 591
+ +
Sbjct: 297 DGTVIKTKV 305
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 1e-11
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
+ +++ AV ++ + ++ + G+ N++ L L+ N ++ P
Sbjct: 30 KKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNGNKLTDIKPLTN 85
Query: 455 AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGN 514
NL L + N+ + + K L +N S +I L L L +L L N
Sbjct: 86 LKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNN 141
Query: 515 KLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ 574
K++ + + T L+ L+L N++S +I + L + +L LS N S ++ G
Sbjct: 142 KITD--ITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLRALAGL 196
Query: 575 LKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPII 617
L+ L S + + +NL ++ N V II
Sbjct: 197 KNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEII 239
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 5e-09
Identities = 38/187 (20%), Positives = 79/187 (42%), Gaps = 10/187 (5%)
Query: 435 NLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSG 494
L +++ + ++ ++ +N+ +Q G+ N+ + N +
Sbjct: 22 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLT- 78
Query: 495 EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVM 554
+I LT+L +L L LD NK+ L S + L +L+L N +S +I + L +
Sbjct: 79 DIK-PLTNLKNLGWLFLDENKIK-DL-SSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQL 133
Query: 555 VSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKN 614
SL L N+ + +I KL+T +L N++ +I + +L+ +++
Sbjct: 134 ESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQIS-DIVPLAGLTKLQNLYLSKNHISDLR 191
Query: 615 PIINLPK 621
+ L
Sbjct: 192 ALAGLKN 198
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 8e-20
Identities = 57/274 (20%), Positives = 104/274 (37%), Gaps = 30/274 (10%)
Query: 72 FNSVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNL 126
+V + L + IT I NL + L+SN I F + L++L
Sbjct: 51 TEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSF----SSLGSLEHL 105
Query: 127 DLSQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFNGT 184
DLS NY + S +S L ++L GN + S+ L++LQ L + +
Sbjct: 106 DLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK 164
Query: 185 FPKEI-GDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPE-AMSN 241
++ L+ LE L + + + ++ + L + + E +
Sbjct: 165 IQRKDFAGLTFLEELEIDAS---DLQSYEPKSLKSIQNVSHLILHM-KQHILLLEIFVDV 220
Query: 242 LSSLEILALNGNHLEG----AIPSGLFL----LNNLTQLFLYDNILSGEIPSSVEALKLT 293
SS+E L L L+ + +G + + D L + + L
Sbjct: 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLL 280
Query: 294 DIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHL 326
+++ S N L S+P+ F +L +LQ + L +N
Sbjct: 281 ELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 1e-15
Identities = 49/329 (14%), Positives = 93/329 (28%), Gaps = 78/329 (23%)
Query: 243 SSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSM 299
+++ L L+ N + I + NL L L N ++ I +L L +DLS
Sbjct: 52 EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSY 109
Query: 300 NNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSLSGVLPPE 357
N L+ ++ F L +L L L N S+ + L+ +V N + +
Sbjct: 110 NYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168
Query: 358 IGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQL 417
F L +++
Sbjct: 169 -----------------------------------DFAG------------LTFLEELEI 181
Query: 418 YSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKTAW---NLTRLEISNNRFSGQIQ 473
++ + N+S L+L L ++ LE+ +
Sbjct: 182 DASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDT--- 236
Query: 474 RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 533
+ L +GE L + + L ++ + + L L
Sbjct: 237 ------------FHFSELSTGETNS-LIKKFTFRNVKITDESLF-QVMKLLNQISGLLEL 282
Query: 534 NLARNELSGEIPKAIGSLLVMVSLDLSGN 562
+RN+L L + + L N
Sbjct: 283 EFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 4e-14
Identities = 50/274 (18%), Positives = 94/274 (34%), Gaps = 30/274 (10%)
Query: 283 IPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI-GKIPALK 341
+ +V++L DLS N +T + + NLQ L L SN ++ + + +L+
Sbjct: 50 LTEAVKSL-----DLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLE 103
Query: 342 KFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQFSGPLPENLCAG-GVLQGVVAFENNL 398
+ N LS L L S+L + N + +L + LQ + +
Sbjct: 104 HLDLSYNYLS-NLSSSWFKPL-SSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT 161
Query: 399 SGAVP-KSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKTAW 456
+ K L +++ ++ + N+S L+L L
Sbjct: 162 FTKIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVD 219
Query: 457 ---NLTRLEISNNRFSG----QIQRGV----GSWKNLIVFKASNNLFSGEIPVELTSLSH 505
++ LE+ + ++ G K ++ ++ L +S
Sbjct: 220 VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
Query: 506 LNTLLLDGNKLSGKLPSQIV-SWTSLNNLNLARN 538
L L N+L +P I TSL + L N
Sbjct: 279 LLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 42/243 (17%), Positives = 73/243 (30%), Gaps = 48/243 (19%)
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF----NLSSLMLSDNTISGEL 450
N ++ L C L+ + L SN + + +F +L L LS N +S L
Sbjct: 61 NNRITYISNSDLQRCVNLQALVLTSNGIN-TIEED---SFSSLGSLEHLDLSYNYLS-NL 115
Query: 451 PSKTAW---NLTRLEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSH 505
S +LT L + N + + + L + + N +I + L+
Sbjct: 116 SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTF 175
Query: 506 LNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
L L +D + L + S S+ N++ L L Q
Sbjct: 176 LEELEIDASDLQ-SYEPK--SLKSIQNVS---------------------HLILHMKQHI 211
Query: 566 GEIPPEI--GQLKLNTFNLSSNKLYGN-----IPDEFNNLAYDDSFLNNSNLCVKNPIIN 618
+ + L L E N+L +F N +
Sbjct: 212 -LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD--ESLFQ 268
Query: 619 LPK 621
+ K
Sbjct: 269 VMK 271
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 1e-19
Identities = 58/227 (25%), Positives = 84/227 (37%), Gaps = 58/227 (25%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IGSG G + E VAVK I +++ +++E I ++RH NIV+
Sbjct: 27 DIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE----IINHRSLRHPNIVRFK 82
Query: 758 CCISSENSKLLVYEYMENQSLDRWL--HGRK---------RSLVSGSSSVHQHVLHWPTR 806
I + ++ EY L + GR + L+SG S H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM------- 135
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAKQGEPH 864
QI HRD+K N LLD KI DFG +K +P
Sbjct: 136 --------------------QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175
Query: 865 TMSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTG 905
+ G+ Y APE Y + D++S GV L ++ G
Sbjct: 176 S---TVGTPAYIAPEVLLRQEYD-----GKIADVWSCGVTLYVMLVG 214
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-19
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 36/232 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-AEIEILGTIRHANIVKL 756
IG G G+V + N + A+K + N +K ++ E + E++I+ + H +V L
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYM-NKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 757 WCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAA 814
W E + +V + + L R+ + + +L I + A
Sbjct: 81 WYSFQDE-EDMFMVVDLLLGGDL-RYHLQQNVHFKEET-----------VKLFICELVMA 127
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L Y+ + +IIHRD+K NILLD I DF +A ML ++ + TM+ G+
Sbjct: 128 --LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKP 179
Query: 875 YFAPE-------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
Y APE Y+ V D +S GV EL+ G+ + TS E
Sbjct: 180 YMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHIRSSTSSKE 227
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 1e-19
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 30/216 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIRHANIV 754
+GSG V + G G+ A K I R+L+ E+ IL IRH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFI-KKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 755 KLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L ++ +L+ E + L D + + + Q +L
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ-IL------------ 118
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEPHTMSAV 869
G+ Y+H +I H D+K NI+L + K+ DFG+A + + G +
Sbjct: 119 -DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE--FKNI 171
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE + + D++S GV+ L++G
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 1e-19
Identities = 50/216 (23%), Positives = 81/216 (37%), Gaps = 30/216 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIRHANIV 754
+GSG V + G A K I R+ E+ IL I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 755 KLWCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L ++ +L+ E + L D + + + Q +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL------------- 124
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEPHTMSAV 869
G+ Y+H QI H D+K NI+L KI DFGLA + G +
Sbjct: 125 -NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNI 177
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 905
G+ + APE + + D++S GV+ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-19
Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 77/252 (30%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIA---------------- 740
IG G G V + N + A+K + + +KL ++
Sbjct: 20 EIGKGSYGVVKLAYNEND-NTYYAMK-VLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPR 77
Query: 741 --------EIEILGTIRHANIVKLWCCISSEN-SKL-LVYEYMENQSL-DRWLHGRK--- 786
EI IL + H N+VKL + N L +V+E + + +
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 787 ------RSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 840
+ L+ G + Y+H+ +IIHRD+K SN+L+
Sbjct: 138 QARFYFQDLIKG------------------------IEYLHYQ---KIIHRDIKPSNLLV 170
Query: 841 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE------YAYTTKVNEKIDIYS 894
+ KIADFG++ +G +S G+ + APE ++ K +D+++
Sbjct: 171 GEDGHIKIADFGVSNEF--KGSDALLSNTVGTPAFMAPESLSETRKIFSGK---ALDVWA 225
Query: 895 FGVVLLELVTGK 906
GV L V G+
Sbjct: 226 MGVTLYCFVFGQ 237
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 2e-19
Identities = 33/282 (11%), Positives = 70/282 (24%), Gaps = 58/282 (20%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
G Q ++ +D VA+ + L + +E ++ L I + ++
Sbjct: 38 FHGGVPPLQFWQALDTA-LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + L+V E++ SL ++ A
Sbjct: 97 LDVVHTRAGGLVVAEWIRGGSLQEVADTS---------------PSPVGAIRAMQSLAAA 141
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
H + S + + + +A
Sbjct: 142 ADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------------------TM 176
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
DI G L L+ + S A R A + +D
Sbjct: 177 PDANPQD-------DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADID 229
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ I P + +A R + +L ++++
Sbjct: 230 RDI--PFQISA------VAARSVQGDGGIRSAS-TLLNLMQQ 262
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 3e-19
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+GSG G V G VA+K+++ + ++ K E+ +L +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 759 CISSENSKL------LVYEYMENQSLDRWLHG--RKRSLVSGSSSVH-QHVLHWPTRLQI 809
+ + + LV +M D L + L Q +++ Q+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGT---D--LGKLMKHEKL----GEDRIQFLVY-----QM 137
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+GL Y+H IIHRD+K N+ ++ + + KI DFGLA+ + V
Sbjct: 138 L----KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA----DSEMTGYV 186
Query: 870 AGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE YT +DI+S G ++ E++TGK
Sbjct: 187 VTRW-YRAPEVILNWMRYTQ----TVDIWSVGCIMAEMITGK 223
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-19
Identities = 57/207 (27%), Positives = 80/207 (38%), Gaps = 32/207 (15%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT-IRHANIVKLW 757
IG G R AVK I + K + EIEIL +H NI+ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKII-DKSKRDPT------EEIEILLRYGQHPNIITLK 82
Query: 758 CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+V E M+ L D+ L R++ S VL I +
Sbjct: 83 DVYDDGKYVYVVTELMKGGELLDKIL--RQKFF---SEREASAVLF-----TIT----KT 128
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKA----KIADFGLAKMLAKQGEPHTMSAVAGS 872
+ Y+H ++HRD+K SNIL E +I DFG AK L + E + +
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAENGLLMTPCYT 183
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVL 899
+ APE + DI+S GV+L
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLL 210
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 3e-19
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 54/227 (23%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA-EIEILGTIRHANIVKL 756
+G G G+V G VAVK I N +K+ I EI+ L RH +I+KL
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 757 WCCISSENSKLLVYEYMENQSL-DRWL-HGRK---------RSLVSGSSSVHQHVLHWPT 805
+ IS+ + +V EY+ L D +GR + ++SG H+H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH------ 135
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
++HRD+K N+LLD+ AKIADFGL+ M++ T
Sbjct: 136 ---------------------MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 174
Query: 866 MSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
GS Y APE YA ++DI+S GV+L L+ G
Sbjct: 175 ---SCGSPNYAAPEVISGRLYA-----GPEVDIWSSGVILYALLCGT 213
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 4e-19
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 44/225 (19%)
Query: 698 LIGSGGSGQVY----RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIR 749
L+GSGG G VY D VA+K + +++ E E+ +L +
Sbjct: 50 LLGSGGFGSVYSGIRVSD----NLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 750 HA--NIVKLWCCISSENSKLLVYEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+++L +S +L+ E E Q L ++ R L + +
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-L---QEELARSFFW---- 156
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPHT 865
Q+ + + + H+ ++HRD+K NIL+D + K+ DFG +L K
Sbjct: 157 -QVL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTD 207
Query: 866 MSAVAGSFGYFAPEY----AYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y PE+ Y + ++S G++L ++V G
Sbjct: 208 ---FDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMVCGD 246
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 4e-19
Identities = 73/356 (20%), Positives = 119/356 (33%), Gaps = 91/356 (25%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
L +G G GQV ID VAVK + + ++E++IL
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 79
Query: 746 GTI-RHANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGR------------------ 785
I H N+V L C +++ E+ + +L +L +
Sbjct: 80 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGK 139
Query: 786 ----------KRSLVSGSSS-------------------------VHQHVLHWPTRLQIA 810
KR L S +SS +++ L + +
Sbjct: 140 DYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYS 199
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A+G M + + IHRD+ + NILL + KI DFGLA+ + K + V
Sbjct: 200 FQVAKG---MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----YVR 251
Query: 871 GSFGYF-----APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY--GDEHTSLAEWAWR 923
APE + + D++SFGV+L E+ + + Y
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
Query: 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
P + E +Y+ L C PS RP+ E+++ L
Sbjct: 312 GTRMRAP----------DYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 5e-19
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 35/217 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKL 756
++G G +V + AVK I + + + E+E+L + H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKII-EKQPGHIR--SRVFREVEMLYQCQGHRNVLEL 76
Query: 757 WCCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
E+ LV+E M S+ +H R+ +S V Q V
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSH-IHKRRHFNELEASVVVQDVA-------------S 122
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKML-----AKQGEPHTMS 867
L ++H I HRD+K NIL + + KI DF L + +
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 868 AVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVL 899
GS Y APE + +++ D++S GV+L
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-19
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 678 SFHQLGF--TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE 735
F++ T + + +GSG G V +GE VA+K++ + ++
Sbjct: 9 GFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFA 67
Query: 736 KEFIAEIEILGTIRHANIVKLWCCISSENSKL------LVYEYMENQSLDRWLHGRKRSL 789
K E+ +L ++H N++ L + +S LV +M+ D L
Sbjct: 68 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT---D--LQKIMGL- 121
Query: 790 VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849
S Q++++ Q+ +GL Y+H + ++HRD+K N+ ++ + + KI
Sbjct: 122 -KFSEEKIQYLVY-----QML----KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKIL 168
Query: 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVT 904
DFGLA+ + V + Y APE Y +DI+S G ++ E++T
Sbjct: 169 DFGLARHA----DAEMTGYVVTRW-YRAPEVILSWMHYNQ----TVDIWSVGCIMAEMLT 219
Query: 905 GK 906
GK
Sbjct: 220 GK 221
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 8e-19
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 48/243 (19%)
Query: 685 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI 744
NI S +L+G G G V GE VA+K+I + EI+I
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKI 62
Query: 745 LGTIRHANIVKLWCCISSENSKL-----LVYEYMENQSLDRWLHG--RKRSLVSGSSSVH 797
L +H NI+ ++ ++ + ++ E M+ D LH + L S H
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT---D--LHRVISTQML----SDDH 113
Query: 798 -QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856
Q+ ++ Q + + +H +IHRD+K SN+L++S K+ DFGLA++
Sbjct: 114 IQYFIY-----QTL----RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
Query: 857 LAKQGEPHTMSAVAGSFG--------YFAPE-----YAYTTKVNEKIDIYSFGVVLLELV 903
+ + ++ S Y APE Y+ +D++S G +L EL
Sbjct: 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSR----AMDVWSCGCILAELF 217
Query: 904 TGK 906
+
Sbjct: 218 LRR 220
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 9e-19
Identities = 55/269 (20%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 677 TSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEK 736
+ + G ++ + +LIG G G VY + VA+K++ + + K
Sbjct: 12 ENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCK 70
Query: 737 EFIAEIEILGTIRHANIVKLWCCISSENSKL-----LVYEYMENQSLDRWLHGRKRSLVS 791
+ EI IL ++ I++L+ I ++ +V E ++ D L ++ +
Sbjct: 71 RILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS---D--LKKLFKTPIF 125
Query: 792 GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851
+ + +L+ + G ++H IIHRD+K +N LL+ + K+ DF
Sbjct: 126 LTEEHIKTILY-----NLL----LGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDF 173
Query: 852 GLAKMLAKQGEPHTMSAVAGSFG--------------------YFAPE-----YAYTTKV 886
GLA+ + + + + ++ + + Y APE YT
Sbjct: 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTK-- 231
Query: 887 NEKIDIYSFGVVLLELVTGKEANYGDEHT 915
IDI+S G + EL+ +++ D
Sbjct: 232 --SIDIWSTGCIFAELLNMLQSHINDPTN 258
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 1e-18
Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 24/217 (11%)
Query: 70 CTFN---SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNL 126
C + S ++ +++T +PP + K+ T + LS N + L T+L L
Sbjct: 4 CEVSKVASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 127 DLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----N 182
+L + + + D + L +DL N +P L L L + N
Sbjct: 61 NLDRAE-LTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 183 GTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPEAM-S 240
G L L+ L L N + +P KL+ L + N + E+P + +
Sbjct: 118 GALRG----LGELQELYLKGN---ELKTLPPGLLTPTPKLEKLSLAN-NNLTELPAGLLN 169
Query: 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L +L+ L L N L IP G F + L FL+ N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 48/205 (23%), Positives = 74/205 (36%), Gaps = 21/205 (10%)
Query: 412 LRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI---SNNRF 468
V + LP L + + L LS+N + T TRL
Sbjct: 12 HLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRA-- 65
Query: 469 SGQIQR--GVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI-V 525
++ + G+ L S+N +P+ +L L L + N+L+ LP
Sbjct: 66 --ELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALR 121
Query: 526 SWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEI--GQLKLNTFNLS 583
L L L NEL P + + L L+ N + E+P + G L+T L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180
Query: 584 SNKLYGNIPDE-FNNLAYDDSFLNN 607
N LY IP F + +FL+
Sbjct: 181 ENSLY-TIPKGFFGSHLLPFAFLHG 204
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 57/279 (20%), Positives = 85/279 (30%), Gaps = 84/279 (30%)
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
S ++S + + +L A+P +P L LS
Sbjct: 7 SKVASHLEVNCDKRNL-TALPPD--------------------LPKDTTIL-----HLSE 40
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N L L L L L+ ++ G +P L + +N L LP
Sbjct: 41 NLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQ 97
Query: 360 LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 419
AL +VS N+ + LP G L+G+ L+ + L
Sbjct: 98 TLPALTVLDVSFNRLTS-LPL-----GALRGLGE------------------LQELYLKG 133
Query: 420 NRFSGELPTGLWT-TFNLSSLMLSDNTISGELPSKTAWNLTRLE---ISNNRFSGQIQRG 475
N LP GL T T L L L++N ++ ELP+ L L+ + N +
Sbjct: 134 NELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQEN----SLYT- 186
Query: 476 VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGN 514
IP L L GN
Sbjct: 187 --------------------IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 43/179 (24%), Positives = 64/179 (35%), Gaps = 9/179 (5%)
Query: 411 TLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSG 470
+ L N L L+ L L ++ T L L++S+N+
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ- 90
Query: 471 QIQRGVGSWKNLIVFKASNNLFSGEIPVEL-TSLSHLNTLLLDGNKLSGKLPSQI-VSWT 528
+ + L V S N + +P+ L L L L GN+L LP +
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTP 148
Query: 529 SLNNLNLARNELSGEIPKAI-GSLLVMVSLDLSGNQFSGEIPPEI-GQLKLNTFNLSSN 585
L L+LA N L+ E+P + L + +L L N IP G L L N
Sbjct: 149 KLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 2e-18
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 57/285 (20%)
Query: 664 RRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKR 723
++ + + K T+ ++ I +LIG+G G V VA+K+
Sbjct: 26 EGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKK 85
Query: 724 IWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL-----LVYEYMENQSL 778
I + + K + EI IL + H ++VK+ + ++ + +V E +
Sbjct: 86 ILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD---S 141
Query: 779 DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 838
D R+ V + + +L+ + G+ Y+H + I+HRD+K +N
Sbjct: 142 D--FKKLFRTPVYLTELHIKTLLY-----NLL----VGVKYVH---SAGILHRDLKPANC 187
Query: 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG------------------------ 874
L++ + K+ DFGLA+ + ++ ++
Sbjct: 188 LVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR 247
Query: 875 -YFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDE 913
Y APE YT ID++S G + EL+ + N
Sbjct: 248 WYRAPELILLQENYTE----AIDVWSIGCIFAELLNMIKENVAYH 288
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 59/266 (22%), Positives = 94/266 (35%), Gaps = 46/266 (17%)
Query: 87 QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG 146
++I +L S+ + + + + DI + G
Sbjct: 15 KQIFSD-DAFAETIKDNLKKKSV--TDAVTQNELNSIDQIIANNS--------DIKSVQG 63
Query: 147 LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--S 204
+Q L + L+L N+ P + +L NL L L N
Sbjct: 64 IQY------------------LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK 103
Query: 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF 264
+ LKKLK+L + E N I +I + +L LE L L N + + L
Sbjct: 104 DLSS------LKDLKKLKSLSL-EHNGISDI-NGLVHLPQLESLYLGNNKIT--DITVLS 153
Query: 265 LLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSN 324
L L L L DN +S +I KL ++ LS N+++ + LKNL +L LFS
Sbjct: 154 RLTKLDTLSLEDNQIS-DIVPLAGLTKLQNLYLSKNHIS-DL-RALAGLKNLDVLELFSQ 210
Query: 325 HLSGEVPASIGKIPALKKFKVFNNSL 350
+ + K + SL
Sbjct: 211 ECLNKPINHQSNLVVPNTVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 27/251 (10%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
NS+ I + DI + I L N+T + L+ N + P L N L L L +N
Sbjct: 45 LNSIDQIIANNSDIK-SVQGI-QYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100
Query: 132 YFVGPIPSDIDRISG---LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
+ D+ + L+ + L N S DI + L +L++LYL N T
Sbjct: 101 ----KV-KDLSSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNN--KITDITV 151
Query: 189 IGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
+ L+ L+ L L N S+ P L KL+ L++++ N I ++ A++ L +L+
Sbjct: 152 LSRLTKLDTLSLEDNQISDIVP------LAGLTKLQNLYLSK-NHISDL-RALAGLKNLD 203
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDN-ILSGEIPSSVEALKLTDIDLSMNNLTGS 305
+L L + L + D +++ EI S + ++ + T
Sbjct: 204 VLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNE 263
Query: 306 IPEEFGKLKNL 316
+ F + +
Sbjct: 264 VSFIFYQPVTI 274
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 455
+++ AV ++ + ++ + G+ N++ L L+ N ++ P
Sbjct: 34 KSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNGNKLTDIKPLANL 89
Query: 456 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNK 515
NL L + N+ + + K L +N S +I L L L +L L NK
Sbjct: 90 KNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNK 145
Query: 516 LSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575
++ + + T L+ L+L N++S +I + L + +L LS N S ++ G
Sbjct: 146 ITD--ITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLRALAGLK 200
Query: 576 KLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPIIN 618
L+ L S + + +NL ++ N V II+
Sbjct: 201 NLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIIS 243
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 49/308 (15%), Positives = 93/308 (30%), Gaps = 61/308 (19%)
Query: 261 SGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLG 320
+ L ++ + + E + I + +++ S+ + L N+ L
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVTQN-ELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLF 74
Query: 321 LFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPE 380
L N L+ I L K L + N+
Sbjct: 75 LNGNKLT--------DIKPLANLK------------------NLGWLFLDENKVK----- 103
Query: 381 NLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLM 440
+LS L + + L+++ L N S ++ GL L SL
Sbjct: 104 ----------------DLSS-----LKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLY 140
Query: 441 LSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEL 500
L +N I+ L L + +N+ S I + L S N S ++ L
Sbjct: 141 LGNNKITDITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLR-AL 196
Query: 501 TSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLS 560
L +L+ L L + K + + N + L + ++
Sbjct: 197 AGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWH 256
Query: 561 GNQFSGEI 568
+F+ E+
Sbjct: 257 LPEFTNEV 264
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 435 NLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSG 494
L +++ + ++ ++ +N+ +Q G+ N+ + N +
Sbjct: 25 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLT- 81
Query: 495 EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVM 554
+I L +L +L L LD NK+ L S + L +L+L N +S +I + L +
Sbjct: 82 DIK-PLANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGIS-DIN-GLVHLPQL 136
Query: 555 VSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
SL L N+ + +I KL+T +L N++
Sbjct: 137 ESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQI 168
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 680 HQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI 739
+ ++ T + IG G G V N VA+K+I + +Q + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL 73
Query: 740 AEIEILGTIRHANIVKLWCCISSENSKL-----LVYEYMENQSLDRWLHG--RKRSLVSG 792
EI+IL RH NI+ + I + + +V + ME D L+ + + L
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET---D--LYKLLKTQHL--- 125
Query: 793 SSSVH-QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 851
S+ H + L+ QI +GL Y+H + ++HRD+K SN+LL++ KI DF
Sbjct: 126 -SNDHICYFLY-----QIL----RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 852 GLAKMLAKQ-GEPHTMSAVAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTG 905
GLA++ ++ + Y APE YT IDI+S G +L E+++
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK----SIDIWSVGCILAEMLSN 228
Query: 906 K 906
+
Sbjct: 229 R 229
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 5e-18
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+GSG G V G VAVK++ + + K E+ +L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 759 CISSENSKL------LVYEYMENQSLDRWLHGRKRSLVSGSSSVH-QHVLHWPTRLQIAI 811
+ S LV M L+ + +K L + H Q +++ QI
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQK--L----TDDHVQFLIY-----QI-- 141
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+GL Y+H + IIHRD+K SN+ ++ + + KI DFGLA+ A VA
Sbjct: 142 --LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVAT 192
Query: 872 SFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ Y APE Y +DI+S G ++ EL+TG+
Sbjct: 193 RW-YRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLTGR 227
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 5e-18
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 36/211 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
++G G +G+V G+ A+K + + ++ E++ +IV +
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLL-YDSPKARQ-------EVDHHWQASGGPHIVCI 87
Query: 757 W----CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+ L++ E ME L R +R + + ++ I
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMR-----DIG- 138
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSA 868
+ ++H I HRDVK N+L S+ K K+ DFG AK + +
Sbjct: 139 ---TAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQT 188
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
+ Y APE K ++ D++S GV++
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 6e-18
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V + G+ A K++ R +K E + E +IL + +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ-- 815
++++ LV M L ++ ++ + +V AA+
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY--------------AAEIC 296
Query: 816 -GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
GL +H + +I++RD+K NILLD +I+D GLA + + G+ G
Sbjct: 297 CGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVG 350
Query: 875 YFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
Y APE YT D ++ G +L E++ G+
Sbjct: 351 YMAPEVVKNERYTFSP----DWWALGCLLYEMIAGQ 382
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 7e-18
Identities = 29/191 (15%), Positives = 72/191 (37%), Gaps = 39/191 (20%)
Query: 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG---LQCID 151
+ +LT I L++ ++ + +++L ++ + ++ + ISG L+ +
Sbjct: 42 QMNSLTYITLANINV--TDLTGIEYAHNIKDLTINNIHA-----TNYNPISGLSNLERLR 94
Query: 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211
+ G + + D ++ L+ L L + + + + +I L + + L+YN
Sbjct: 95 IMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYN-------- 146
Query: 212 PIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQ 271
I +I + L L+ L + + + G+ L Q
Sbjct: 147 ------------------GAITDI-MPLKTLPELKSLNIQFDGVHDY--RGIEDFPKLNQ 185
Query: 272 LFLYDNILSGE 282
L+ + + G+
Sbjct: 186 LYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 6e-17
Identities = 29/179 (16%), Positives = 69/179 (38%), Gaps = 16/179 (8%)
Query: 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--SNFKPAMI 211
G + + +I + +++ L + L I N++ L + +N+ P
Sbjct: 31 GQSSTANI--TEAQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNYNP--- 83
Query: 212 PIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQ 271
L L+ L + ++ + +S L+SL +L ++ + + +I + + L +
Sbjct: 84 ---ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNS 140
Query: 272 LFLYDNILSGEIPSSVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGE 329
+ L N +I ++ L L +++ + + L L FS + G+
Sbjct: 141 IDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 3/111 (2%)
Query: 93 ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152
I L NL + + + + L T L LD+S + I + I+ + + IDL
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143
Query: 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN 203
N DI + L EL++L + + + I D L L
Sbjct: 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 5/180 (2%)
Query: 388 LQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 447
+ + S + +L + L + + +L TG+ N+ L +++ +
Sbjct: 22 FKAYLNGLLGQSSTANITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINNIHAT 79
Query: 448 GELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507
P NL RL I + + +L + S++ I ++ +L +N
Sbjct: 80 NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139
Query: 508 TLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 567
++ L N + + + L +LN+ + + I + L G+
Sbjct: 140 SIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 22/159 (13%), Positives = 55/159 (34%), Gaps = 9/159 (5%)
Query: 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
K + + + I E + ++SL + L ++ +G+ +N+ L + +
Sbjct: 22 FKAYLNGLLGQ-SSTANITE--AQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNI 76
Query: 278 ILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGK 336
+ + + L L + + ++T L +L LL + + + I
Sbjct: 77 HATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
Query: 337 IPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFS 375
+P + + N + P L L+ + +
Sbjct: 135 LPKVNSIDLSYNGAITDIMPLKTLPE-LKSLNIQFDGVH 172
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 6e-10
Identities = 29/153 (18%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 435 NLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSG 494
+ +L ++ + ++ +LT + ++N + + G+ N+ +N +
Sbjct: 24 AYLNGLLGQSSTANITEAQMN-SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN 80
Query: 495 EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVM 554
P ++ LS+L L + G ++ + TSL L+++ + I I +L +
Sbjct: 81 YNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKV 138
Query: 555 VSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
S+DLS N +I P +L + N+ + +
Sbjct: 139 NSIDLSYNGAITDIMPLKTLPELKSLNIQFDGV 171
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
Query: 480 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNE 539
K + + + ++ SL+++ L ++ L + I ++ +L +
Sbjct: 23 KAYLNGLLGQSSTANITEAQMNSLTYIT---LANINVT-DL-TGIEYAHNIKDLTINNIH 77
Query: 540 LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNL 598
+ I L + L + G + + P + L L ++S + +I + N L
Sbjct: 78 ATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTL 135
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 46/226 (20%), Positives = 81/226 (35%), Gaps = 46/226 (20%)
Query: 698 LIGSGGSGQVY----RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA----EIEILGTIR 749
L+G GG G V+ D VA+K I ++ E+ +L +
Sbjct: 38 LLGKGGFGTVFAGHRLTD----RLQVAIKVI-PRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 750 ----HANIVKLWCCISSENSKLLVYEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
H +++L ++ +LV E Q L ++ + +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPL----GEGPSRCFFG-- 146
Query: 805 TRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEP 863
Q+ + + H ++HRD+K NIL+D AK+ DFG +L
Sbjct: 147 ---QVV----AAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY 195
Query: 864 HTMSAVAGSFGYFAPEY----AYTTKVNEKIDIYSFGVVLLELVTG 905
G+ Y PE+ Y ++S G++L ++V G
Sbjct: 196 TD---FDGTRVYSPPEWISRHQYHAL---PATVWSLGILLYDMVCG 235
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 2e-17
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG G+V+ + G+ A K++ R +K + + E +IL + IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ-- 815
++ LV M + H + + + + AQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPRAIFY----------TAQIV 299
Query: 816 -GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
GL ++H II+RD+K N+LLD + +I+D GLA L AG+ G
Sbjct: 300 SGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPG 354
Query: 875 YFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ APE Y V D ++ GV L E++ +
Sbjct: 355 FMAPELLLGEEYDFSV----DYFALGVTLYEMIAAR 386
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 2e-17
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 56/254 (22%)
Query: 683 GFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEI 742
G + ++L +G G G V++ GE VAVK+I++ + N + EI
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-NSTDAQRTFREI 59
Query: 743 EILGTIR-HANIVKLWCCISSENSK--LLVYEYMENQSLDRWLHG--RKRSLVSGSSSVH 797
IL + H NIV L + ++N + LV++YME D LH R L VH
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET---D--LHAVIRANIL----EPVH 110
Query: 798 -QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 856
Q+V++ Q+ + + Y+H + ++HRD+K SNILL++E K+ADFGL++
Sbjct: 111 KQYVVY-----QLI----KVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158
Query: 857 LAKQGEPHTMSAVAGSFG-------------------YFAPE-----YAYTTKVNEKIDI 892
++ + Y APE YT ID+
Sbjct: 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK----GIDM 214
Query: 893 YSFGVVLLELVTGK 906
+S G +L E++ GK
Sbjct: 215 WSLGCILGEILCGK 228
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 2e-17
Identities = 55/229 (24%), Positives = 85/229 (37%), Gaps = 32/229 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G G+V + + A+K + + + F E +I+ +V+L+
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQG 816
+ +V EYM L + + R A + A
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDV---PEKW--------ARFYTAEVVLA-- 180
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L +H IHRDVK N+LLD K+ADFG + K+G +AV G+ Y
Sbjct: 181 LDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYI 236
Query: 877 APE--------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+PE Y + D +S GV L E++ G Y D
Sbjct: 237 SPEVLKSQGGDGYYGREC----DWWSVGVFLYEMLVGDTPFYADSLVGT 281
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 2e-17
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 54/233 (23%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G GG+G V+ N + VA+K+I + + K + EI+I+ + H NIVK++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 759 CISSENSKL--------------LVYEYMENQSLDRWLHG--RKRSLVSGSSSVH-QHVL 801
+ S+L +V EYME D L + L H + +
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET---D--LANVLEQGPL----LEEHARLFM 126
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIADFGLAKMLAKQ 860
+ Q+ +GL Y+H + ++HRD+K +N+ +++E KI DFGLA+++
Sbjct: 127 Y-----QLL----RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPH 174
Query: 861 -GEPHTMSA-VAGSFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+S + + Y +P YT ID+++ G + E++TGK
Sbjct: 175 YSHKGHLSEGLVTKW-YRSPRLLLSPNNYTK----AIDMWAAGCIFAEMLTGK 222
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 2e-17
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLW 757
+G G +G+V +I E A+K + Q K E+E+ + +IV++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKML-------QDCPKAR-REVELHWRASQCPHIVRIV 121
Query: 758 C----CISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ L+V E ++ L R R + + ++ I
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQ---DRGDQAFTEREASEIMK-----SIG-- 171
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAV 869
+ + Y+H I HRDVK N+L S+ K+ DFG AK ++
Sbjct: 172 --EAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNS--LTTP 223
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
+ Y APE K ++ D++S GV++
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 5e-17
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 161 IPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLK 219
IP +I ++ + L L N+ + K L+ L +L L N K +P F LK
Sbjct: 31 IPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDN---KLQTLPAGIFKELK 85
Query: 220 KLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDN 277
L+TLW+T+ N + +P L +L L L+ N L+ ++P +F L LT L L N
Sbjct: 86 NLETLWVTD-NKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYN 143
Query: 278 ILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI 334
L +P V + L L ++ L N L +PE F KL L+ L L +N L +
Sbjct: 144 ELQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 335 GKIPALKKFKVFNN 348
+ LK ++ N
Sbjct: 202 DSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-15
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 31/204 (15%)
Query: 94 CDLKNLTTI-----------DLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI- 141
C K LT I DL SN + + + TKL+ L L+ N +P+ I
Sbjct: 23 CSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIF 81
Query: 142 DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTFPKEIGDLSNLE 196
+ L+ + + N +P + +L L L L N+ F L+ L
Sbjct: 82 KELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS----LTKLT 136
Query: 197 VLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNH 254
L L YN + +P F L LK L + N + +PE A L+ L+ L L+ N
Sbjct: 137 YLSLGYN---ELQSLPKGVFDKLTSLKELRLYN-NQLKRVPEGAFDKLTELKTLKLDNNQ 192
Query: 255 LEGAIPSGLF-LLNNLTQLFLYDN 277
L+ +P G F L L L L +N
Sbjct: 193 LK-RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 51/197 (25%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKT 454
N LS K+ LR + L N+ LP G++ NL +L ++DN + LP
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGV 104
Query: 455 AW---NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
NL L + N Q++ +F LT L++L+ L
Sbjct: 105 FDQLVNLAELRLDRN----QLK------------SLPPRVFDS-----LTKLTYLS---L 140
Query: 512 DGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPP 570
N+L LP + TSL L L N+L A L + +L L NQ +P
Sbjct: 141 GYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPE 198
Query: 571 EI--GQLKLNTFNLSSN 585
KL L N
Sbjct: 199 GAFDSLEKLKMLQLQEN 215
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 2e-16
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN---IV 754
+IG GG G+VY G+ A+K + R ++ E + E +L + + IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ + + + + M L H + + S + AA
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMR--------------FYAA 299
Query: 815 Q---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+ GL +MH+ +++RD+K +NILLD +I+D GLA +K +PH G
Sbjct: 300 EIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VG 352
Query: 872 SFGYFAPE-----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ GY APE AY + D +S G +L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKLLRGH 388
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-16
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 31/230 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G G+V + + A + A+K + L + F E ++L I L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQG 816
+N+ LV +Y L L S + R +A + A
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLL-----------SKFEDRLPEEMARFYLAEMVIA-- 187
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ +H +HRD+K NIL+D ++ADFG L + G + AV G+ Y
Sbjct: 188 IDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYI 243
Query: 877 APE---------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+PE Y + D +S GV + E++ G+ Y +
Sbjct: 244 SPEILQAMEGGKGRYGPEC----DWWSLGVCMYEMLYGETPFYAESLVET 289
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 3e-16
Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 18/199 (9%)
Query: 405 SLGNCRTLRTVQLYSNRFSGELPT--GLWTTFNLSSLMLSDNTISG------ELPSKTAW 456
+ L+ + L + +G P T +L+ L L + + + EL
Sbjct: 90 RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKP 149
Query: 457 NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEI-------PVELTSLSHLNTL 509
L L I+ V + L S+N GE P++ +L L
Sbjct: 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALR 209
Query: 510 LLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLV-MVSLDLSGNQFSGEI 568
SG + + L L+L+ N L + SL+LS ++
Sbjct: 210 NAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QV 268
Query: 569 PPEIGQLKLNTFNLSSNKL 587
P + KL+ +LS N+L
Sbjct: 269 PKGLPA-KLSVLDLSYNRL 286
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 40/209 (19%), Positives = 66/209 (31%), Gaps = 22/209 (10%)
Query: 396 NNLSGAVPKSLGNC--RTLRTVQLYSNRFSGELP----TGLWTTFNLSSLMLSDNTISGE 449
++G P L L + L + ++ W L L ++
Sbjct: 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSL-N 163
Query: 450 LPSKTAWNLTRLE---ISNNRFSGQI----QRGVGSWKNLIVFKASNNLF---SGEIPVE 499
+ L +S+N G+ + L V N SG
Sbjct: 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223
Query: 500 LTSLSHLNTLLLDGNKLSGKLPSQIVSW-TSLNNLNLARNELSGEIPKAIGSLLVMVSLD 558
+ L L L N L + W + LN+LNL+ L ++PK + + L LD
Sbjct: 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS--VLD 280
Query: 559 LSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
LS N+ P ++ +L N
Sbjct: 281 LSYNRLD-RNPSPDELPQVGNLSLKGNPF 308
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 42/248 (16%)
Query: 71 TFNSVTGISLRHKDITQKIPPII--CDLKNLTTIDLSSNSIPGEFPE----FLYNCTKLQ 124
+ + ++L + ++T PP + +L ++L + S + L+
Sbjct: 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLK 152
Query: 125 NLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSI----GRLSELQTLYLYMNE 180
L ++Q + + + L +DL N G+ + LQ L L
Sbjct: 153 VLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
Query: 181 FN---GTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE 237
G L+ L L++N + + A +L +L
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHN-SLRDAAGAPSCDWPSQLNSL------------- 258
Query: 238 AMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDL 297
NLS L+ +P GL L+ L L N L PS E ++ ++ L
Sbjct: 259 ---NLSF--------TGLK-QVPKGLP--AKLSVLDLSYNRLD-RNPSPDELPQVGNLSL 303
Query: 298 SMNNLTGS 305
N S
Sbjct: 304 KGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 8e-13
Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 20/208 (9%)
Query: 411 TLRTVQLYSNRFSGELPTGLWTTFNLSS---LMLSDNTISGELP----SKTAWNLTRLEI 463
+L+ + + + R + G +S L L + ++G P T +L L +
Sbjct: 69 SLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNL 128
Query: 464 SNNRFSGQIQR----GVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK 519
N ++ + L V + ++ L+TL L N G+
Sbjct: 129 RNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGE 188
Query: 520 LP----SQIVSWTSLNNLNLARNE---LSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEI 572
+ + +L L L SG + + + LDLS N
Sbjct: 189 RGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS 248
Query: 573 GQL--KLNTFNLSSNKLYGNIPDEFNNL 598
+LN+ NLS L L
Sbjct: 249 CDWPSQLNSLNLSFTGLKQVPKGLPAKL 276
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 1e-12
Identities = 49/294 (16%), Positives = 85/294 (28%), Gaps = 39/294 (13%)
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL----KLTDI 295
S +L + + + +L +L + + I + L ++
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS-GEVPASIGKI-----PALKKFKVFNNS 349
L +TG+ P + L L ++S A + ++ P LK +
Sbjct: 101 TLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAH 160
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSG--PLPENLCAGGVLQGVVAFENNLSGAVPKSLG 407
++ + AL ++S N G L LC P
Sbjct: 161 SLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC-------------------PLKFP 201
Query: 408 NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW---NLTRLEIS 464
+ L SG L L LS N++ + + L L +S
Sbjct: 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261
Query: 465 NNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG 518
Q+ +G+ + L V S N P L + L L GN
Sbjct: 262 FTGLK-QVPKGLPA--KLSVLDLSYNRLD-RNPSPDE-LPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 5e-12
Identities = 53/288 (18%), Positives = 88/288 (30%), Gaps = 39/288 (13%)
Query: 292 LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLS 351
L +D + + + LK L + + I L++ + N ++
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 352 GVLPPEIG--LHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNC 409
G PP + L + ++ A+ L + L
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRD--------------AWLAELQQWLKPGL--- 151
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKTAW------NLTRLE 462
+ + + F LS+L LSDN GE +A L L
Sbjct: 152 ---KVLSIAQAHSL-NFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLA 207
Query: 463 ISNNRF---SGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTS-LSHLNTLLLDGNKLSG 518
+ N SG + L S+N S LN+L L L
Sbjct: 208 LRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK- 266
Query: 519 KLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 566
++P + + L+ L+L+ N L P L + +L L GN F
Sbjct: 267 QVPKGLPA--KLSVLDLSYNRLD-RNPS-PDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 3e-11
Identities = 60/368 (16%), Positives = 99/368 (26%), Gaps = 90/368 (24%)
Query: 107 NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP-SDIDRISGLQCIDLGGNNFSGDIPRSI 165
N + E L+ L + +DI + L+ + + I
Sbjct: 29 NCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGA 88
Query: 166 GRL---SELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLK 222
R+ S LQ L L E GT P + + + ++ L N A L++
Sbjct: 89 LRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNIL-NLRNVSWATRDAWLAELQQWL 147
Query: 223 TLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGE 282
L++L++ H + + L+ L L DN GE
Sbjct: 148 -------------------KPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGE 188
Query: 283 IPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKK 342
L ++ K LQ+L L + +
Sbjct: 189 RG-----------------LISALCP--LKFPTLQVLALRNAGM---------------- 213
Query: 343 FKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAV 402
+ SGV L+G ++S N C
Sbjct: 214 -----ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD------------------ 250
Query: 403 PKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLE 462
L ++ L ++P GL LS L LS N + + L
Sbjct: 251 -----WPSQLNSLNLSFTGLK-QVPKGLPA--KLSVLDLSYNRLDRNPSPDELPQVGNLS 302
Query: 463 ISNNRFSG 470
+ N F
Sbjct: 303 LKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 41/207 (19%), Positives = 67/207 (32%), Gaps = 25/207 (12%)
Query: 397 NLSGAVPK--SLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
N S P S NC V+LY S E L + + + I L
Sbjct: 16 NFSDPKPDWSSAFNCLGAADVELYGGGRSLEY---LLKRVDTEADLGQFTDIIKSL---- 68
Query: 455 AWNLTRLEISNNRFSGQIQRG---VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 511
+L RL + R +I G V L N +G P L + + +L
Sbjct: 69 --SLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNIL 126
Query: 512 DGNKLS----GKLPSQIVSW--TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 565
+ +S +++ W L L++A+ + + + +LDLS N
Sbjct: 127 NLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPEL 186
Query: 566 GEIP-----PEIGQLKLNTFNLSSNKL 587
GE + L L + +
Sbjct: 187 GERGLISALCPLKFPTLQVLALRNAGM 213
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 6e-16
Identities = 55/243 (22%), Positives = 83/243 (34%), Gaps = 55/243 (22%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+IG G +V + + G+ A+K + L + F E ++L I +L
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 758 CCISSENSKLLVYEYMENQSLDRWL--HGRKRS----------LVSGSSSVHQHVLHWPT 805
EN LV EY L L G + +V SVH+
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL------ 181
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
+HRD+K NILLD ++ADFG L G +
Sbjct: 182 ---------------------GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220
Query: 866 MSAVAGSFGYFAPE-----------YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
+ AV G+ Y +PE +Y + D ++ GV E+ G+ Y D
Sbjct: 221 LVAV-GTPDYLSPEILQAVGGGPGTGSYGPEC----DWWALGVFAYEMFYGQTPFYADST 275
Query: 915 TSL 917
Sbjct: 276 AET 278
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFV 719
D L++ T +L F ++ +G+G G+V + +G
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRI--------------KTLGTGSFGRVMLVKHKESGNHY 69
Query: 720 AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLD 779
A+K + + + K + + E IL + +VKL ++ +V EY+ +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 780 RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGAAQGLCYMHHDCTPQIIHRDVKSSNI 838
+ H R+ S R A I Y+H +I+RD+K N+
Sbjct: 129 -FSHLRRIGRFSEPH----------ARFYAAQIVLT--FEYLHSL---DLIYRDLKPENL 172
Query: 839 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVV 898
L+D + ++ DFG AK + +G T+ G+ APE + N+ +D ++ GV+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV--KGRTWTL---CGTPEALAPEIILSKGYNKAVDWWALGVL 227
Query: 899 LLELVTG 905
+ E+ G
Sbjct: 228 IYEMAAG 234
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 5e-15
Identities = 59/233 (25%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----------AEIEILGT 747
L+G G G+V + G + A+K L+KE I E +L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMK----------ILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRL 807
RH + L + + V EY L L R+R +
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVF---------------SED 248
Query: 808 QIAIGAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPH 864
+ A+ L Y+H + +++RD+K N++LD + KI DFGL K K G
Sbjct: 249 RARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-- 304
Query: 865 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
TM G+ Y APE +D + GVV+ E++ G+ Y +H L
Sbjct: 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 7e-15
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 50/226 (22%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHA----- 751
+IG G GQV + + + VA+K + N ++ Q E EI IL +R
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-----EIRILEHLRKQDKDNT 158
Query: 752 -NIVKLWC--------CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
N++ + C++ E + +YE ++ G LV + H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF----QGFSLPLV-------RKFAH 207
Query: 803 WPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAKQ 860
I Q L +H +IIH D+K NILL + ++ K+ DFG +
Sbjct: 208 -----SIL----QCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---- 251
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
E + S Y APE + ID++S G +L EL+TG
Sbjct: 252 -EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-14
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL- 265
P +P + + + E N I IP A S L + L+ N + + F
Sbjct: 27 PTNLPET------ITEIRL-EQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQG 78
Query: 266 LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLF 322
L +L L LY N ++ E+P S+ L + L+ N + + + F L NL LL L+
Sbjct: 79 LRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLY 136
Query: 323 SNHLSGEVPASIGKIPALKKFKVFNN 348
N L + + A++ + N
Sbjct: 137 DNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 16/138 (11%)
Query: 74 SVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNLDL 128
++T I L I IPP K L IDLS+N I P F L +L L
Sbjct: 33 TITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAF----QGLRSLNSLVL 87
Query: 129 SQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFNGTFP 186
N +P + + + LQ + L N + + L L L LY N+ T
Sbjct: 88 YGNKITE-LPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQ-TIA 144
Query: 187 KEIGD-LSNLEVLGLAYN 203
K L ++ + LA N
Sbjct: 145 KGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 55/182 (30%)
Query: 243 SSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSM 299
++ + L N ++ IP G F L ++ L +N +S E+ L + L
Sbjct: 32 ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYG 89
Query: 300 NNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEI 358
N +T +P+ F L +LQLL L +N ++ + F +
Sbjct: 90 NKIT-ELPKSLFEGLFSLQLLLLNANKIN--------CLRV----DAFQD---------- 126
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLY 418
LH+ L + N+ + + F + ++T+ L
Sbjct: 127 -LHN-LNLLSLYDNKLQT-IAKG-----------TFSPLRA------------IQTMHLA 160
Query: 419 SN 420
N
Sbjct: 161 QN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Query: 411 TLRTVQLYSNRFSGELPTGLWTTF----NLSSLMLSDNTISGELPSKT---AWNLTRLEI 463
T+ ++L N +P G F L + LS+N IS EL +L L +
Sbjct: 33 TITEIRLEQNTIK-VIPPG---AFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVL 87
Query: 464 SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 523
N+ + ++ + + F G L L LLL+ NK++ L
Sbjct: 88 YGNKIT-ELPKSL---------------FEG--------LFSLQLLLLNANKIN-CLRVD 122
Query: 524 I-VSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564
+LN L+L N+L L + ++ L+ N F
Sbjct: 123 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 62/314 (19%), Positives = 105/314 (33%), Gaps = 62/314 (19%)
Query: 74 SVTGISLRHKDIT----QKIPPIICDLKNLTTIDLSSNSIPGE----FPEFLYNCTKLQN 125
S+ G SL+ IT + + ++ + ++ I LS N+I E E + + L+
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 64
Query: 126 LDLSQNYFVGPIPSDIDRI-----------SGLQCIDLGGNNFSGDIPRSIGRL----SE 170
+ S F G + +I L + L N F + +
Sbjct: 65 AEFSDI-FTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTP 123
Query: 171 LQTLYLYMNEF-------------NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI--EF 215
L+ LYL+ N K+ + L + N +M F
Sbjct: 124 LEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183
Query: 216 GMLKKLKTLWMTEANLIGE------IPEAMSNLSSLEILALNGNHL--EGA--IPSGLFL 265
+ L T+ M + N I + E ++ L++L L N G+ + L
Sbjct: 184 QSHRLLHTVKMVQ-NGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242
Query: 266 LNNLTQLFLYDNILSGE-IPSSVEALK------LTDIDLSMNNLTGSIPEEFG-----KL 313
NL +L L D +LS + V+A L + L N + K+
Sbjct: 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 302
Query: 314 KNLQLLGLFSNHLS 327
+L L L N S
Sbjct: 303 PDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 2e-10
Identities = 65/345 (18%), Positives = 110/345 (31%), Gaps = 82/345 (23%)
Query: 221 LKTLWMTEANLIGE-----IPEAMSNLSSLEILALNGNHL--EGA--IPSGLFLLNNLTQ 271
++ + + I + + S++ + L+GN + E A + + +L
Sbjct: 6 IEGKSLKL-DAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 64
Query: 272 LFLYDNI---LSGEIPSSVEAL--------KLTDIDLSMNNLTGSIPEEFGKL----KNL 316
D + EIP ++ L KL + LS N + E L
Sbjct: 65 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 124
Query: 317 QLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSG 376
+ L L +N L + A I + AL++ V + + L N+
Sbjct: 125 EHLYLHNNGLGPQAGAKIAR--ALQELAVNKKAKN---------APPLRSIICGRNR--- 170
Query: 377 PLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE-----LPTGLW 431
L G + K+ + R L TV++ N E L GL
Sbjct: 171 -----LENGSMK------------EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA 213
Query: 432 TTFNLSSLMLSDNTISGE--------LPSKTAWNLTRLEISNNRFSGQ----IQRGVGSW 479
L L L DNT + L S NL L +++ S + +
Sbjct: 214 YCQELKVLDLQDNTFTHLGSSALAIALKSWP--NLRELGLNDCLLSARGAAAVVDAFSKL 271
Query: 480 KN--LIVFKASNNLFSGEIPVEL-----TSLSHLNTLLLDGNKLS 517
+N L + N + L + L L L+GN+ S
Sbjct: 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 8e-04
Identities = 32/176 (18%), Positives = 50/176 (28%), Gaps = 54/176 (30%)
Query: 97 KNLTTIDLSSNSIPGE-----FPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCID 151
+ L T+ + N I E E L C +L+ LDL N + L
Sbjct: 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN-----------TFTHLGSSA 235
Query: 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211
L ++ L+ L L + + D + N
Sbjct: 236 LA---------IALKSWPNLRELGLNDCLLSARGAAAVVD-------AFSKLEN------ 273
Query: 212 PIEFGMLKKLKTLWMTEANLIGE-----IPEAM-SNLSSLEILALNGNHL--EGAI 259
L+TL + N I + + + L L LNGN E +
Sbjct: 274 -------IGLQTLRLQY-NEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 321
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 5e-14
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 34/218 (15%)
Query: 698 LIGSGGSGQVY---RIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHAN 752
++G G G+V+ +I + A + A+K + +K L + E +IL + H
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 753 IVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
IVKL +E KL L+ +++ L L +
Sbjct: 88 IVKLHYAFQTE-GKLYLILDFLRGGDLFTRLSKEVMFTEE----------------DVKF 130
Query: 812 GAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
A+ L ++H II+RD+K NILLD E K+ DFGL+K + +
Sbjct: 131 YLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYS 185
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE + D +SFGV++ E++TG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 36/239 (15%)
Query: 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153
P + + +L + + + ++ + I
Sbjct: 5 VSTPIKQ-------IFPDDAF------AETIKANLKKKSVTDAVTQN--ELNSIDQIIAN 49
Query: 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFN--GTFPKEIGDLSNLEVLGLAYNSNFK-PAM 210
++ + I L ++ L L N+ + + L+NL L L N P
Sbjct: 50 NSDIKS-VQ-GIQYLPNVRYLALGGNKLHDISALKE----LTNLTYLILTGNQLQSLPNG 103
Query: 211 IPIEFGMLKKLKTLWMTEANLIGEIPEAMSN-LSSLEILALNGNHLEGAIPSGLF-LLNN 268
+ F L LK L + N + +P+ + + L++L L L N L+ ++P G+F L N
Sbjct: 104 V---FDKLTNLKELVL-VENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTN 158
Query: 269 LTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSN 324
LT+L L N L +P V + L +L D+ L N L S+P+ F +L +LQ + L N
Sbjct: 159 LTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE 196
P D + +L + + D L+ + + ++ + I L N+
Sbjct: 13 FPDDAF--AETIKANLKKKSVT-DAVTQNE-LNSIDQIIANNSDI--KSVQGIQYLPNVR 66
Query: 197 VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHL 255
L L N K I L L L + N + +P L++L+ L L N L
Sbjct: 67 YLALGGN---KLHDISA-LKELTNLTYLIL-TGNQLQSLPNGVFDKLTNLKELVLVENQL 121
Query: 256 EGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FG 311
+ ++P G+F L NLT L L N L +P V + L LT++DLS N L S+PE F
Sbjct: 122 Q-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFD 178
Query: 312 KLKNLQLLGLFSNHL 326
KL L+ L L+ N L
Sbjct: 179 KLTQLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 43/234 (18%), Positives = 73/234 (31%), Gaps = 46/234 (19%)
Query: 5 ASVFPKIPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCD 64
I L ++ + + +Q +
Sbjct: 11 QIFPDDAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVR---- 66
Query: 65 WPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSI----PGEFPEFLYNC 120
+ N + IS + L NLT + L+ N + G F +
Sbjct: 67 --YLALGGNKLHDISALKE------------LTNLTYLILTGNQLQSLPNGVFDKL---- 108
Query: 121 TKLQNLDLSQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
T L+ L L +N +P + D+++ L ++L N +L+ L L L N
Sbjct: 109 TNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167
Query: 180 EF----NGTFPKEIGDLSNLEVLGLAYN---SNFKPAMIPIE-FGMLKKLKTLW 225
+ G F K L+ L+ L L N S +P F L L+ +W
Sbjct: 168 QLQSLPEGVFDK----LTQLKDLRLYQNQLKS------VPDGVFDRLTSLQYIW 211
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 1e-13
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 10/137 (7%)
Query: 193 SNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALN 251
L L N F F L +L+ + + N I +I E A S + + L
Sbjct: 32 QYTAELRLNNNE-FTVLEATGIFKKLPQLRKINFSN-NKITDIEEGAFEGASGVNEILLT 89
Query: 252 GNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPE 308
N LE + +F L +L L L N ++ + + L + + L N +T ++
Sbjct: 90 SNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAP 146
Query: 309 E-FGKLKNLQLLGLFSN 324
F L +L L L +N
Sbjct: 147 GAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 5e-11
Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 16/147 (10%)
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPE--AMSNLSSLEILALNGNHLEGAIPSGLFL 265
P IP L + N + L L + + N + I G F
Sbjct: 27 PEHIPQY------TAELRL-NNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFE 78
Query: 266 -LNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGL 321
+ + ++ L N L + + + L L + L N +T + + F L +++LL L
Sbjct: 79 GASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSL 136
Query: 322 FSNHLSGEVPASIGKIPALKKFKVFNN 348
+ N ++ P + + +L + N
Sbjct: 137 YDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 34/164 (20%)
Query: 63 CDWPEITCTFNSVTGI-----------SLRHKDITQKIPP--IICDLKNLTTIDLSSNSI 109
C+ + C+ + I L + + T + I L L I+ S+N I
Sbjct: 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTV-LEATGIFKKLPQLRKINFSNNKI 69
Query: 110 ----PGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRS 164
G F + + + L+ N + + + L+ + L N + +
Sbjct: 70 TDIEEGAF----EGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRIT-CVGND 123
Query: 165 I-GRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYN 203
LS ++ L LY N+ G F L +L L L N
Sbjct: 124 SFIGLSSVRLLSLYDNQITTVAPGAFDT----LHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 12/116 (10%)
Query: 73 NSVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSN---SIPGEFPEFLYNCTKLQNLDL 128
+ I+ + I I + + I L+SN ++ + L+ L L
Sbjct: 57 PQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTSNRLENVQ---HKMFKGLESLKTLML 112
Query: 129 SQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFN 182
N + +D +S ++ + L N + + L L TL L N FN
Sbjct: 113 RSNRITC-VGNDSFIGLSSVRLLSLYDNQITT-VAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 36/159 (22%)
Query: 435 NLSSLMLSDNTISGELPSKTAW----NLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNN 490
+ L L++N + L + + L ++ SNN +I
Sbjct: 33 YTAELRLNNNEFT-VLEATGIFKKLPQLRKINFSNN----KIT------------DIEEG 75
Query: 491 LFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQI-VSWTSLNNLNLARNELSGEIPKAIG 549
F G S +N +LL N+L + ++ SL L L N ++ +
Sbjct: 76 AFEG--------ASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRIT-CVGNDSF 125
Query: 550 SLLVMV-SLDLSGNQFSGEIPPEI--GQLKLNTFNLSSN 585
L V L L NQ + + P L+T NL +N
Sbjct: 126 IGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLAN 163
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 1e-13
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 161 IPRSIGRLSELQTLYLYMN-----EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE- 214
+P+S+ S L L N T + L+NL L L++N I E
Sbjct: 33 VPQSL--PSYTALLDLSHNNLSRLRAEWTPTR----LTNLHSLLLSHN---HLNFISSEA 83
Query: 215 FGMLKKLKTLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQL 272
F + L+ L ++ N + + E + S+L +LE+L L NH+ + F + L +L
Sbjct: 84 FVPVPNLRYLDLSS-NHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKL 141
Query: 273 FLYDNILSGEIP----SSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQL--LGLFSNH 325
+L N +S P L KL +DLS N L + KL L L +N
Sbjct: 142 YLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200
Query: 326 L 326
L
Sbjct: 201 L 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 1e-13
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 193 SNLEVLGLAYNSNFKPAMIPIE--FGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILA 249
S +L L++N + + E L L +L ++ N + I A + +L L
Sbjct: 39 SYTALLDLSHN---NLSRLRAEWTPTRLTNLHSLLLSH-NHLNFISSEAFVPVPNLRYLD 94
Query: 250 LNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSI 306
L+ NHL + LF L L L LY+N + + + + +L + LS N ++
Sbjct: 95 LSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RF 151
Query: 307 PEE----FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKV--FNNSL 350
P E KL L LL L SN L + K+PA K + NN L
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 9e-13
Identities = 41/178 (23%), Positives = 65/178 (36%), Gaps = 25/178 (14%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTFPKEIGD 191
+P + S +DL NN S RL+ L +L L N + F
Sbjct: 33 VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF----VP 86
Query: 192 LSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEIL 248
+ NL L L+ N + F L+ L+ L + N I + A +++ L+ L
Sbjct: 87 VPNLRYLDLSSNHLHTLDEFL----FSDLQALEVLLLYN-NHIVVVDRNAFEDMAQLQKL 141
Query: 249 ALNGNHLEGAIPSGLFL----LNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNN 301
L+ N + P L L L L L N L + ++ L L ++N
Sbjct: 142 YLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 1e-12
Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 57/237 (24%)
Query: 54 QSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEF 113
+S S + C C N ++ + ++ Q +P +DLS N++
Sbjct: 7 RSVVSCPANC-----LCASNILSCSKQQLPNVPQSLPS------YTALLDLSHNNLSRLR 55
Query: 114 PE-FLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQ 172
E T L +L LS N L I F + L+
Sbjct: 56 AEWTPTRLTNLHSLLLSHN--------------HLNFISSEA--FVP--------VPNLR 91
Query: 173 TLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMT 227
L L N F DL LEVL L N ++ F + +L+ L+++
Sbjct: 92 YLDLSSNHLHTLDEFLFS----DLQALEVLLLYNN---HIVVVDRNAFEDMAQLQKLYLS 144
Query: 228 EANLIGEIPE----AMSNLSSLEILALNGNHLEGAIPSGLF-LLNNLTQ--LFLYDN 277
+ N I P + L L +L L+ N L+ +P L + L+L++N
Sbjct: 145 Q-NQISRFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 2e-12
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 230 NLIGEIP--EAMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSS 286
N + + + L++L L L+ NHL I S F+ + NL L L N L +
Sbjct: 49 NNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLH-TLDEF 106
Query: 287 V--EALKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPA----SIGKIPA 339
+ + L + L N++ + F + LQ L L N +S P K+P
Sbjct: 107 LFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPK 164
Query: 340 LKKFKVFNNSLSGVLPPEIGLHSALE 365
L + +N L + ++ A
Sbjct: 165 LMLLDLSSNKLKKLPLTDLQKLPAWV 190
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 24/188 (12%)
Query: 413 RTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA----WNLTRLEISNNRF 468
+ + +P L + + L LS N +S L ++ NL L +S+N
Sbjct: 21 NILSCSKQQLP-NVPQSLPS--YTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHL 76
Query: 469 SGQIQRGV-GSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQI-V 525
+ I NL S+N + + L L LLL N + +
Sbjct: 77 N-FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFE 133
Query: 526 SWTSLNNLNLARNELSGEIP----KAIGSLLVMVSLDLSGNQFSGEIPPEI----GQLKL 577
L L L++N++S P K L ++ LDLS N+ ++P
Sbjct: 134 DMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVK 191
Query: 578 NTFNLSSN 585
N L +N
Sbjct: 192 NGLYLHNN 199
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 2e-13
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK---LNQKLEKEFIAEIEILGTIRHANIV 754
+G+G G+V+ I G + A+K + +K + K + E +L + H I+
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVL---KKEIVVRLKQVEHTNDERLMLSIVTHPFII 69
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-IGA 813
++W ++ +Y+E L + RK S + A +
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGEL--FSLLRK----SQRFPNPV------AKFYAAEVCL 117
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A L Y+H II+RD+K NILLD KI DFG AK P + G+
Sbjct: 118 A--LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYTLCGTP 167
Query: 874 GYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTG 905
Y APE Y + D +SFG+++ E++ G
Sbjct: 168 DYIAPEVVSTKPYNKSI----DWWSFGILIYEMLAG 199
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 48/227 (21%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHA---- 751
+LIG G GQV + E+VA+K I N + LNQ E+ +L +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLLELMNKHDTEM 114
Query: 752 --NIVKLWC--------CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
IV L C+ E +Y+ + N + G +L
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTN----FRGVSLNLTR---------- 160
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA--KIADFGLAKMLAK 859
+ A L ++ IIH D+K NILL + ++ KI DFG +
Sbjct: 161 ------KFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--- 210
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ S Y +PE + ID++S G +L+E+ TG+
Sbjct: 211 --LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 51/235 (21%), Positives = 88/235 (37%), Gaps = 54/235 (22%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA----- 751
+G G V+ D+ VA+K + ++ + E E I++L + A
Sbjct: 26 KLGWGHFSTVWLAKDMV-NNTHVAMKIVRGDKVYTEAAEDE----IKLLQRVNDADNTKE 80
Query: 752 ------NIVKLWCCISSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
+I+KL + + +V+E + ++L + K+ G ++
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALI---KKYEHRGIPLIYVK-- 134
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA------KIADFGLAK 855
QI+ GL YMH C IIH D+K N+L++ KIAD G A
Sbjct: 135 ------QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 856 MLAKQGEPHTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
+ + Y +PE + DI+S ++ EL+TG
Sbjct: 187 W-----YDEHYTNSIQTREYRSPEVLLGAPWGCG----ADIWSTACLIFELITGD 232
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 37/230 (16%), Positives = 78/230 (33%), Gaps = 46/230 (20%)
Query: 93 ICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG---LQC 149
L N +L S+ + +QN + + + + L+
Sbjct: 15 DPGLANAVKQNLGKQSV--TDLVSQKELSGVQNFNGDNSNI-----QSLAGMQFFTNLKE 67
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
+ L N S D+ + L++L+ L + N + +L+ +
Sbjct: 68 LHLSHNQIS-DLS-PLKDLTKLEELSVNRN--------RLKNLNGIP------------- 104
Query: 210 MIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNL 269
L L++ N + + +++ +L +LEIL++ N L+ L L+ L
Sbjct: 105 --------SACLSRLFLDN-NELRDT-DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKL 152
Query: 270 TQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLL 319
L L+ N ++ K+ IDL+ + +L +
Sbjct: 153 EVLDLHGNEIT-NTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTV 201
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 22/187 (11%)
Query: 168 LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKLKTLW 225
L+ L +LS ++ + + LK L
Sbjct: 18 LANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAG------MQFFTNLKELH 69
Query: 226 MTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPS 285
++ N I ++ + +L+ LE L++N N L+ +G+ L++LFL +N L
Sbjct: 70 LSH-NQISDL-SPLKDLTKLEELSVNRNRLK--NLNGIPSAC-LSRLFLDNNELRD--TD 122
Query: 286 SVEALK-LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFK 344
S+ LK L + + N L SI G L L++L L N ++ + ++ +
Sbjct: 123 SLIHLKNLEILSIRNNKLK-SI-VMLGFLSKLEVLDLHGNEIT--NTGGLTRLKKVNWID 178
Query: 345 VFNNSLS 351
+
Sbjct: 179 LTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 38/234 (16%), Positives = 68/234 (29%), Gaps = 44/234 (18%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ V + + +I + + NL + LS N I L + TKL+ L +++N
Sbjct: 40 LSGVQNFNGDNSNIQ-SLAGM-QFFTNLKELHLSHNQI--SDLSPLKDLTKLEELSVNRN 95
Query: 132 YFVGPIPSDIDRISG--LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEI 189
+++ I L + L N D S+ L L+ L + N ++
Sbjct: 96 RL-----KNLNGIPSACLSRLFLDNNELR-DTD-SLIHLKNLEILSIRNN--------KL 140
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILA 249
+ L L KL+ L + N I ++ L + +
Sbjct: 141 KSIVMLG--------------------FLSKLEVLDLHG-NEITNT-GGLTRLKKVNWID 178
Query: 250 LNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLT 303
L G L + D S D +
Sbjct: 179 LTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYYIS-NGGSYVDGCVLWELPV 231
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 16/214 (7%)
Query: 406 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISN 465
L + + + + + ++ I + NL L +S+
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVSQKELS--GVQNFNGDNSNIQSLAGMQFFTNLKELHLSH 72
Query: 466 NRFSGQIQR--GVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 523
N QI + L + N + LS L LD N+L
Sbjct: 73 N----QISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLF---LDNNELRD--TDS 123
Query: 524 IVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLS 583
++ +L L++ N+L I +G L + LDL GN+ + K+N +L+
Sbjct: 124 LIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEIT-NTGGLTRLKKVNWIDLT 180
Query: 584 SNKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPII 617
K L ++ + + I
Sbjct: 181 GQKCVNEPVKYQPELYITNTVKDPDGRWISPYYI 214
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 42/213 (19%), Positives = 70/213 (32%), Gaps = 15/213 (7%)
Query: 404 KSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI 463
S ++ ++ G+ NL L LS N IS P K L L +
Sbjct: 35 VSQKELSGVQNFNGDNSNIQS--LAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSV 92
Query: 464 SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 523
+ NR + L NN L L +L L + NKL +
Sbjct: 93 NRNRLK-NLN--GIPSACLSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLK-SI-VM 145
Query: 524 IVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLS 583
+ + L L+L NE++ + L + +DL+G + E +L + N
Sbjct: 146 LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDLTGQKCVNEPVKYQPELYIT--NTV 201
Query: 584 SNKLYGNIPDEF--NNLAYDDSFLNNSNLCVKN 614
+ I + N +Y D + +
Sbjct: 202 KDPDGRWISPYYISNGGSYVDGCVLWELPVYTD 234
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 62/236 (26%), Positives = 88/236 (37%), Gaps = 50/236 (21%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----------AEIEILGT 747
L+G G G+V + G + A+K L KE I E +L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMK----------ILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 748 IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP-TR 806
RH + L + + V EY L L + V R
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-------------RERVFTEERAR 108
Query: 807 LQIA-IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
A I +A L Y+H +++RD+K N++LD + KI DFGL K G T
Sbjct: 109 FYGAEIVSA--LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 866 MSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
M G+ Y APE Y V D + GVV+ E++ G+ Y +H L
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPFYNQDHERL 213
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 3e-13
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 172 QTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFK-PAMIPIEFGMLKKLKTLWMTEAN 230
+ L L L+ L L L YN A + F L +L TL + N
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV---FDDLTELGTLGLAN-N 93
Query: 231 LIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV- 287
+ +P + +L+ L+ L L GN L+ ++PSG+F L L +L L N L IP+
Sbjct: 94 QLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAF 151
Query: 288 EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSN 324
+ L L + LS N L S+P F +L LQ + LF N
Sbjct: 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 196 EVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNH 254
E L L + F L KL L + + N + + +L+ L L L N
Sbjct: 38 EKLDLQSTGLAT--LSDATFRGLTKLTWLNL-DYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 255 LEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEE-F 310
L ++P G+F L L +L+L N L +PS V KL ++ L+ N L SIP F
Sbjct: 95 LA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAF 151
Query: 311 GKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNN 348
KL NLQ L L +N L + ++ L+ +F N
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 51/202 (25%), Positives = 77/202 (38%), Gaps = 51/202 (25%)
Query: 94 CDLKNLTTI-----------DLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID 142
C K+L ++ DL S + TKL L+L N + + +
Sbjct: 21 CQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGV- 78
Query: 143 RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVL 198
F L+EL TL L N+ G F L+ L+ L
Sbjct: 79 --------------FDD--------LTELGTLGLANNQLASLPLGVFDH----LTQLDKL 112
Query: 199 GLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLE 256
L N + +P F L KLK L + N + IP A L++L+ L+L+ N L+
Sbjct: 113 YLGGN---QLKSLPSGVFDRLTKLKELRL-NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 257 GAIPSGLF-LLNNLTQLFLYDN 277
++P G F L L + L+ N
Sbjct: 169 -SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 80 LRHKDITQKIPPIICDLKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNLDLSQNYFVG 135
L+ + L LT ++L N + G F + T+L L L+ N
Sbjct: 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL----TELGTLGLANNQLAS 97
Query: 136 PIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTFPKEI 189
+P + D ++ L + LGGN +P + RL++L+ L L N+ G F K
Sbjct: 98 -LPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK-- 153
Query: 190 GDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLW 225
L+NL+ L L+ N + +P F L KL+T+
Sbjct: 154 --LTNLQTLSLSTN---QLQSVPHGAFDRLGKLQTIT 185
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 87 QKIPPIICD-LKNLTTIDLSSN---SIP-GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI 141
+P + D L L + L N S+P G F TKL+ L L+ N IP+
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVF----DRLTKLKELRLNTNQLQS-IPAGA 150
Query: 142 -DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMN 179
D+++ LQ + L N +P RL +LQT+ L+ N
Sbjct: 151 FDKLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGN 189
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 73.0 bits (178), Expect = 4e-13
Identities = 80/511 (15%), Positives = 147/511 (28%), Gaps = 154/511 (30%)
Query: 500 LTSLSHLNTLLLDGNKLSGK--LPSQI-------------VSWTSLNNLNLARNELSGEI 544
L L +L+DG SGK + + + W LNL +
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-----LNLKNCNSPETV 198
Query: 545 PKAIGSLLVMVSLDL-SGNQFSGEIPPEIGQLKLNTFNLSSNKLYGN---IPDEFNNLAY 600
+ + LL + + S + S I I ++ L +K Y N + L
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV------L-- 250
Query: 601 DDSFLNNSNLCVKNP-IINLPKCPSRFRNSDKISSKHLALILVLAILVLLVTVSLSWFVV 659
+ V+N N F +S K +LL T V
Sbjct: 251 LN---------VQNAKAWNA------F----NLSCK-----------ILLTTRFKQ---V 277
Query: 660 RDCLRRKRNRDPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSG---QVYRID---IN 713
D L + H + T + S L + +V + ++
Sbjct: 278 TDFLSAATTTHISL----DHHSMTLTPDEVKSLL--LKYLDCRPQDLPREVLTTNPRRLS 331
Query: 714 GAGEFVAVKRI-WNN-RKLNQ-KLEKEFIAEIEIL--GTIRH-----------ANI---- 753
E + W+N + +N KL + + +L R A+I
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Query: 754 -VKLWCCISSENSKLLVYEYMENQSL-DRW-------LHG---RKRSLVSGSSSVHQHVL 801
+W + + ++V + + SL ++ + + + ++H+ ++
Sbjct: 392 LSLIWFDVIKSDVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV 450
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQII----------H--------RDVKSSNILLDSE 843
I + D P + H R + LD
Sbjct: 451 ---DHYNIP------KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR 501
Query: 844 F-KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP-EYAYTTKVNEKIDIYSFGVVLLE 901
F + KI A A +T+ + Y + Y VN +L+
Sbjct: 502 FLEQKIRHDSTA-WNASGSILNTLQQLKFYKPYICDNDPKYERLVNA----------ILD 550
Query: 902 LVTGKEAN-YGDEHTSLAEWAWRHYAEEKPI 931
+ E N ++T L A E++ I
Sbjct: 551 FLPKIEENLICSKYTDLLRIALMA--EDEAI 579
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 9e-13
Identities = 35/234 (14%), Positives = 73/234 (31%), Gaps = 15/234 (6%)
Query: 72 FNSVTGISLRHKDITQKIPP-IICDLKNLTTIDLSSNSIPGEFPEF-LYNCTKLQNLDLS 129
+ + + I +L I++S N + N KL + +
Sbjct: 29 PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87
Query: 130 QNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
+ + I + + LQ + + + L + N T +
Sbjct: 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN 147
Query: 189 I--GDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSL 245
G +L L N I +L L +++ N + E+P S
Sbjct: 148 SFVGLSFESVILWLNKN---GIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGP 204
Query: 246 EILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPSSVEALKLTDIDLS 298
IL ++ + ++PS L L Y+ ++P+ + + L + L+
Sbjct: 205 VILDISRTRIH-SLPSYGLENLKKLRARSTYNLK---KLPTLEKLVALMEASLT 254
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 4e-11
Identities = 39/254 (15%), Positives = 71/254 (27%), Gaps = 35/254 (13%)
Query: 221 LKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNI 278
L + I + A S LE + ++ N + I + +F L L ++ +
Sbjct: 32 AIELRFVL-TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90
Query: 279 LSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASIG 335
I + L L + +S + +P+ LL + N +I
Sbjct: 91 NLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDN-------INIH 142
Query: 336 KIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFE 395
I F GL ++ N + + G L + +
Sbjct: 143 TIER----NSFV-----------GLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSD 186
Query: 396 NN-LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
NN L + + R LP+ NL L +LP+
Sbjct: 187 NNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLE--NLKKLRARSTYNLKKLPTLE 243
Query: 455 AW-NLTRLEISNNR 467
L ++
Sbjct: 244 KLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 49/263 (18%), Positives = 88/263 (33%), Gaps = 25/263 (9%)
Query: 292 LTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFN-N 348
++ + L I + F +L+ + + N + + A + +P L + ++ N
Sbjct: 32 AIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90
Query: 349 SLSGVLPPEI--GLHSALEGFEVSTNQFSGPLPENLCAGGV-LQGVVAFENNLSGAVPKS 405
+L + PE L + L+ +S LP+ + + +N + ++
Sbjct: 91 NLL-YINPEAFQNLPN-LQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERN 147
Query: 406 L--GNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPS---KTAWNLTR 460
G + L N E+ + L L LSDN ELP+ A
Sbjct: 148 SFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVI 206
Query: 461 LEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNK---L 516
L+IS R + + K L N ++P L L L L
Sbjct: 207 LDISRTRIH-SLPSYGLENLKKLRARSTYNL---KKLPT-LEKLVALMEASLTYPSHCCA 261
Query: 517 SGKLPSQIVSWTSLNNLNLARNE 539
QI + N ++ R E
Sbjct: 262 FANWRRQISELHPICNKSILRQE 284
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 69.3 bits (169), Expect = 4e-12
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 33/225 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFI-AEIEILGTI-RHANI 753
++G G G+V + G E AVK + +K + Q + E E +L + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKIL---KKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+L C + + V EY+ L + P + A
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------------QVGRFKEPHAVFYAAEI 451
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
A GL ++ II+RD+K N++LDSE KIADFG+ K G T G+
Sbjct: 452 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTP 506
Query: 874 GYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 914
Y APE Y V D ++FGV+L E++ G+ G++
Sbjct: 507 DYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAPFEGEDE 547
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 5e-12
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 56/232 (24%)
Query: 698 LIGSGGSGQVY---RIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-----------AEIE 743
++G+G G+V+ +I + G+ A+K L+K I E +
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMK----------VLKKATIVQKAKTTEHTRTERQ 110
Query: 744 ILGTIRHAN-IVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
+L IR + +V L +E +KL L+ +Y+ L + H +R + H+
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTE-TKLHLILDYINGGEL--FTHLSQR----ERFTEHE--- 160
Query: 802 HWPTRLQIA-IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
++ + I A L ++H II+RD+K NILLDS + DFGL+K
Sbjct: 161 ---VQIYVGEIVLA--LEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVA 211
Query: 861 GEPHTMSAVAGSFGYFAPE------YAYTTKVNEKIDIYSFGVVLLELVTGK 906
E G+ Y AP+ + V D +S GV++ EL+TG
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAV----DWWSLGVLMYELLTGA 259
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%)
Query: 96 LKNLTTIDLSSN----SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCID 151
L N++ I +S + + YN +K+ ++++ + I D
Sbjct: 54 LPNISRIYVSIDVTLQQLE---SHSFYNLSKVTHIEIRNTRNLTYIDPDA---------- 100
Query: 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211
L L+ L ++ K DL+
Sbjct: 101 -----LKE--------LPLLKFLGIFNTGL-----KMFPDLTK----------------- 125
Query: 212 PIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSS-LEILALNGNHLEGAIPSGLFLLNNL 269
L +T+ + IP A L + L L N ++ F L
Sbjct: 126 ---VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKL 181
Query: 270 TQLFLYDNILSGEIPSSV-EALK--LTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFS 323
++L N I + + +D+S ++T ++P + LK L ++
Sbjct: 182 DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNTWT 238
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 64/262 (24%)
Query: 216 GMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLF 273
+ +TL + E + IP A SNL ++ + ++ + + S F L+ +T +
Sbjct: 28 SLPPSTQTLKLIE-THLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86
Query: 274 LYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPA 332
+ + NLT I + +L L+ LG+F+ L P
Sbjct: 87 IRNT----------------------RNLT-YIDPDALKELPLLKFLGIFNTGLK-MFPD 122
Query: 333 --SIGKIPALKKFKVFNNSLSGVLPPEI--GLHSALEGFEVSTNQFSGPLPENLCAGGVL 388
+ ++ +N +P GL + ++ N F+ +
Sbjct: 123 LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGY------- 174
Query: 389 QGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP----TGLWTTFNLSSLMLSDN 444
AF N L V L N++ + G+++ S L +S
Sbjct: 175 ----AF-NGTK------------LDAVYLNKNKYLTVIDKDAFGGVYS--GPSLLDVSQT 215
Query: 445 TISGELPSKTAWNLTRLEISNN 466
+++ LPSK +L L N
Sbjct: 216 SVT-ALPSKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 46/224 (20%)
Query: 410 RTLRTVQLYSNRFSGELPTGLWTTF----NLSSLMLSDNTISGELPSKTAWNLTRLE--- 462
+ +T++L +P+ F N+S + +S + +L S + +NL+++
Sbjct: 31 PSTQTLKLIETHLR-TIPSH---AFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86
Query: 463 ISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLP- 521
I N R I L L L + L P
Sbjct: 87 IRNTRNLTYIDPDA---------------LKE--------LPLLKFLGIFNTGLK-MFPD 122
Query: 522 -SQIVSWTSLNNLNLARNELSGEIPKAIGSLLV--MVSLDLSGNQFSGEIPPEI-GQLKL 577
+++ S L + N IP L ++L L N F+ + KL
Sbjct: 123 LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKL 181
Query: 578 NTFNLSSNKLYGNIPDE-FNNLAYDDSFLNNSNLCVKNPIINLP 620
+ L+ NK I + F + S L+ S + LP
Sbjct: 182 DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQ----TSVTALP 221
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 6e-12
Identities = 55/231 (23%), Positives = 87/231 (37%), Gaps = 58/231 (25%)
Query: 698 LIGSGGSGQVY---RIDINGAGEFVAVKRIWNNRKLNQKLEKEFI-----------AEIE 743
++G GG G+V+ ++ G+ A+K L+K I AE
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMK----------VLKKAMIVRNAKDTAHTKAERN 73
Query: 744 ILGTIRHANIVKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLH 802
IL ++H IV L + KL L+ EY+ L L +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTG-GKLYLILEYLSGGELFMQLEREGIFMED----------- 121
Query: 803 WPTRLQIAIGAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
A+ L ++H II+RD+K NI+L+ + K+ DFGL K
Sbjct: 122 -----TACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173
Query: 860 QGEPHTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G G+ Y APE + V D +S G ++ +++TG
Sbjct: 174 DGT--VTHTFCGTIEYMAPEILMRSGHNRAV----DWWSLGALMYDMLTGA 218
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 67.9 bits (165), Expect = 9e-12
Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 18/231 (7%)
Query: 90 PPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQC 149
+ L +LS L +C +LQ L+ + + I + + L
Sbjct: 342 CRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 150 IDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
FS R + L L ++F + +++ VL LA+
Sbjct: 401 EKETLQYFSTLKAVDPMRAAYLDDL---RSKFLLENSVLKMEYADVRVLHLAHKDLTVLC 457
Query: 210 MIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNL 269
+ L + L ++ N + +P A++ L LE+L + N LE + G+ L L
Sbjct: 458 HL----EQLLLVTHLDLSH-NRLRALPPALAALRCLEVLQASDNALE-NVD-GVANLPRL 510
Query: 270 TQLFLYDNILSGEIPSSVEAL----KLTDIDLSMNNLTGSIPEEFGKLKNL 316
+L L +N L ++++ L +L ++L N+L +L +
Sbjct: 511 QELLLCNNRLQQ--SAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 4e-10
Identities = 33/245 (13%), Positives = 76/245 (31%), Gaps = 31/245 (12%)
Query: 42 NLKQQLGNPPSLQSW-TSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLT 100
+ L S + + + +K I I ++ L
Sbjct: 340 CWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTI---ILLMRALD 396
Query: 101 TIDLSSNSIPGEFPEFLYNCTKLQNLDLS-----QNYFVGPIPSDIDRISGLQCIDLGGN 155
+ ++ ++ + + + ++ F+ + ++ + L
Sbjct: 397 PLLYEKETL-----QYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHK 451
Query: 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--SNFKPAMIPI 213
+ + + + +L + L L N P + L LEVL + N N
Sbjct: 452 DLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVDG----- 503
Query: 214 EFGMLKKLKTLWMTEANLIGEIPE--AMSNLSSLEILALNGNHL---EGAIPSGLFLLNN 268
L +L+ L + N + + + + L +L L GN L EG +L +
Sbjct: 504 -VANLPRLQELLLCN-NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561
Query: 269 LTQLF 273
++ +
Sbjct: 562 VSSIL 566
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 1e-09
Identities = 47/285 (16%), Positives = 91/285 (31%), Gaps = 30/285 (10%)
Query: 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI----PSDIDRISGLQCI 150
D+ + + F L +++ L L + + P +R S +
Sbjct: 243 DVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLC 302
Query: 151 DLGGNNFSGDIPRSIGR-LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
DL + + +P+ R + D + E L S K
Sbjct: 303 DLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST 362
Query: 210 MIPIEFGMLKKLKTLW-------------MTEANLIGEIPEAMSNLSSLEIL-------- 248
++ E K+L+ L M + + E + S+L+ +
Sbjct: 363 VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL 422
Query: 249 ALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPE 308
+ ++ L L L+ + + L +T +DLS N L ++P
Sbjct: 423 DDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCHLEQLLLVTHLDLSHNRLR-ALPP 480
Query: 309 EFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGV 353
L+ L++L N L V + +P L++ + NN L
Sbjct: 481 ALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQS 523
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 1e-06
Identities = 31/192 (16%), Positives = 53/192 (27%), Gaps = 52/192 (27%)
Query: 14 TLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFN 73
LL ++ + + P E LK + + + + +
Sbjct: 382 KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYA 441
Query: 74 SVTGISLRHKDIT---------------------QKIPPIICDLKNLTTIDLSSN---SI 109
V + L HKD+T + +PP + L+ L + S N ++
Sbjct: 442 DVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 501
Query: 110 PGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLS 169
G + N +LQ L L N R+ I +
Sbjct: 502 DG-----VANLPRLQELLLCNN-----------RLQQSAAIQ------------PLVSCP 533
Query: 170 ELQTLYLYMNEF 181
L L L N
Sbjct: 534 RLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 6e-06
Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 43/231 (18%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 455
S + L +C+ L+ ++ + L T + L L+ T+
Sbjct: 358 VEKSTVLQSELESCKELQELEPENKWC---LLTIILLMRALDPLLYEKETLQ-------- 406
Query: 456 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNK 515
+ L+ + + F E V + + L L
Sbjct: 407 -YFSTLKAVDP-------------MRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 516 LSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575
L+ L + + +L+L+ N L +P A+ +L + L S N + + L
Sbjct: 453 LT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANL 507
Query: 576 -KLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV----KNPIINLPK 621
+L L +N+L A ++ L + N +
Sbjct: 508 PRLQELLLCNNRL--------QQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 8e-06
Identities = 39/261 (14%), Positives = 73/261 (27%), Gaps = 39/261 (14%)
Query: 321 LFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPL-- 378
+ L + ++ + VL E+ L+ E +
Sbjct: 332 VLLKDRPECWCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL 390
Query: 379 -PENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLS 437
L + + + + L P LR+ L N ++
Sbjct: 391 LMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVL------KMEYADVR 444
Query: 438 SLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIP 497
L L+ ++ + +T L++S+NR +P
Sbjct: 445 VLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLR-------------------------ALP 479
Query: 498 VELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG-EIPKAIGSLLVMVS 556
L +L L L N L + + + L L L N L + + S +V
Sbjct: 480 PALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVL 537
Query: 557 LDLSGNQFSGEIPPEIGQLKL 577
L+L GN + +L
Sbjct: 538 LNLQGNSLC-QEEGIQERLAE 557
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 56/210 (26%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLW 757
+G G +G+V +I E A+K + + K + E+E+ + +IV++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR--------EVELHWRASQCPHIVRIV 77
Query: 758 ----CCISSENSKLLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ L+V E ++ L R R + + ++ I
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQ---DRGDQAFTEREASEIMK-----SIG-- 127
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA---KIADFGLAKMLAKQGEPHTMSAV 869
+ + Y+H I HRDVK N+L S+ K+ DFG AK +
Sbjct: 128 --EAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE--------- 173
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 899
Y ++ D++S GV++
Sbjct: 174 ----KY-----------DKSCDMWSLGVIM 188
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 48/248 (19%), Positives = 82/248 (33%), Gaps = 76/248 (30%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHA---- 751
+G G G+V +D VA+K I N K EI +L I+
Sbjct: 26 NLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-----EINVLKKIKEKDKEN 80
Query: 752 --NIVKLWC--------CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
V + CI+ E +E++ ++ + +H+
Sbjct: 81 KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL-----------KENNFQPYPLPHVRHMA 129
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL-DSEFKA-------------- 846
+ Q+ L ++H Q+ H D+K NIL +SEF+
Sbjct: 130 Y-----QLC----HALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177
Query: 847 ----KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVV 898
++ADFG A + + + + Y PE + D++S G +
Sbjct: 178 NTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQP----CDVWSIGCI 228
Query: 899 LLELVTGK 906
L E G
Sbjct: 229 LFEYYRGF 236
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-11
Identities = 72/415 (17%), Positives = 125/415 (30%), Gaps = 110/415 (26%)
Query: 219 KKLKTLWMTEANLIGE--IPEAMSNLSSLEILALNGNHL--EGA--IPSGLFLLNNLTQL 272
+++L + + + E + L +++ L+ L I S L + L +L
Sbjct: 3 LDIQSLDIQC-EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61
Query: 273 FLYDNILSGEIPSSVEAL---------KLTDIDLSMNNLT----GSIPEEFGKLKNLQLL 319
L N L V + K+ + L LT G + L LQ L
Sbjct: 62 NLRSNELG---DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQEL 118
Query: 320 GLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLP 379
L N L + + L LE ++ S
Sbjct: 119 HLSDNLLGDAGLQLLCE--GLLD-----------------PQCRLEKLQLEYCSLSAASC 159
Query: 380 ENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE----LPTGL-WTTF 434
E L + L + + + +N + L GL +
Sbjct: 160 EPLASV--------------------LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199
Query: 435 NLSSLMLSDNTISGE--------LPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFK 486
L +L L ++ + + SK +L L + +N+ G+ L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKA--SLRELALGSNKLGDV---GM---AELCPGL 251
Query: 487 ASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARNELSG 542
+ S L TL + ++ K L + + SL L+LA NEL
Sbjct: 252 LHPS-------------SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298
Query: 543 EIPKAIGSLLVMV-----SLDLSGNQFSGEIPPEIGQ-LKLNTF----NLSSNKL 587
E + + L+ SL + F+ L N F +S+N+L
Sbjct: 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-10
Identities = 69/471 (14%), Positives = 140/471 (29%), Gaps = 91/471 (19%)
Query: 74 SVTGISLRHKDITQKIPPIICD-LKNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDL 128
+ + ++ ++++ + L+ + L + L L L+L
Sbjct: 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 63
Query: 129 SQNYFVGPIPSDIDRIS--------GLQCIDLGGNNFS----GDIPRSIGRLSELQTLYL 176
N + + +Q + L + G + ++ L LQ L+L
Sbjct: 64 RSNELG---DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHL 120
Query: 177 YMNEFNGTFPKEIGDL-----SNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL 231
N + + + LE L L Y + A +L+ E +
Sbjct: 121 SDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC-SLSAASCEPLASVLRAKPDF--KELTV 177
Query: 232 ----IGE-----IPEAM-SNLSSLEILALNGNHL--EGAIPSGLFLLNN--LTQLFLYDN 277
I E + + + + LE L L + + + + L +L L N
Sbjct: 178 SNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 237
Query: 278 ILSGE-IPSSVEALK-----LTDIDLSMNNLT----GSIPEEFGKLKNLQLLGLFSNHLS 327
L + L L + + +T G + ++L+ L L N L
Sbjct: 238 KLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297
Query: 328 GEVPASIGKI-----PALKKFKVFNNSLSGVLPPEIGL----HSALEGFEVSTNQFSGPL 378
E + + L+ V + S + + L ++S N+
Sbjct: 298 DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED-- 355
Query: 379 PENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE----LPTGLWTTF 434
GV L + + LR + L S L L
Sbjct: 356 ----------AGVRE----LCQGLGQP--GS-VLRVLWLADCDVSDSSCSSLAATLLANH 398
Query: 435 NLSSLMLSDNTIS-------GELPSKTAWNLTRLEISNNRFSGQIQRGVGS 478
+L L LS+N + E + L +L + + +S +++ + +
Sbjct: 399 SLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQA 449
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 1e-09
Identities = 84/535 (15%), Positives = 148/535 (27%), Gaps = 137/535 (25%)
Query: 97 KNLTTIDLSSNSI-PGEFPEFLYNCTKLQNLDLSQNYF----VGPIPSDIDRISGLQCID 151
++ ++D+ + + E L + Q + L I S + L ++
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 152 LGGNNFSGDIPRSIGRL-----SELQTLYLYMNEFNGTFPKEIGDL----SNLEVLGLAY 202
L N + + ++Q L L G + L+ L L+
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 203 NSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHL--EGA-- 258
N L L+ E + LE L L L
Sbjct: 123 NL-------------------LGDAGLQLLCEG--LLDPQCRLEKLQLEYCSLSAASCEP 161
Query: 259 IPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL---------KLTDIDLSMNNLT----GS 305
+ S L + +L + +N ++ + V L +L + L +T
Sbjct: 162 LASVLRAKPDFKELTVSNNDIN---EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 218
Query: 306 IPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALE 365
+ +L+ L L SN L A + L S L
Sbjct: 219 LCGIVASKASLRELALGSNKLGDVGMAELCP--GLLH-----------------PSSRLR 259
Query: 366 GFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 425
+ + +G L + +L+ + L N E
Sbjct: 260 TLWIWECGITA------------KGCGD----LCRVLRAK----ESLKELSLAGNELGDE 299
Query: 426 ----LPTGLW-TTFNLSSLMLSDNTISGE--------LPSKTAWNLTRLEISNNRFSGQI 472
L L L SL + + + L L L+ISNNR
Sbjct: 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR--FLLELQISNNRLEDA- 356
Query: 473 QRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK----LPSQIVSWT 528
GV + L S L L L +S L + +++
Sbjct: 357 --GV---RELCQGLGQPG-------------SVLRVLWLADCDVSDSSCSSLAATLLANH 398
Query: 529 SLNNLNLARNELSGEIPKAIGSLL-----VMVSLDLSGNQFSGEIPPEIGQLKLN 578
SL L+L+ N L + + ++ L L +S E+ + L+ +
Sbjct: 399 SLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKD 453
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 6e-04
Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 61/231 (26%)
Query: 92 IICDLKNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDLSQNYFVGPIPSD------- 140
++ L T+ + I + L L+ L L+ N D
Sbjct: 251 LLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL-----GDEGARLLC 305
Query: 141 ---IDRISGLQCIDLGGNNFSGD----IPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS 193
++ L+ + + +F+ + + L L + N + D +
Sbjct: 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNN--------RLED-A 356
Query: 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE-----IPEAMSNLSSLEIL 248
+ L L+ LW+ + + + + SL L
Sbjct: 357 GVRELCQGLGQP------------GSVLRVLWL-ADCDVSDSSCSSLAATLLANHSLREL 403
Query: 249 ALNGNHLEGAIPSGLFLL--------NNLTQLFLYDNILSGEIPSSVEALK 291
L+ N L +G+ L L QL LYD S E+ ++AL+
Sbjct: 404 DLSNNCLG---DAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALE 451
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 3e-11
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 45/234 (19%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----------AEIEILGT 747
++G G G+V+ + +F A+K L+K+ + E +L
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIK----------ALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 748 -IRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H + ++C ++ + V EY+ L + + + +
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKF-----DLSRATFY---- 123
Query: 807 LQIAIGAAQ---GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
AA+ GL ++H I++RD+K NILLD + KIADFG+ K
Sbjct: 124 ------AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA- 173
Query: 864 HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+ G+ Y APE K N +D +SFGV+L E++ G+ +G + L
Sbjct: 174 -KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 5e-11
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 49/236 (20%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----------AEIEILGT 747
++G G G+V + G+ AVK L+K+ I E IL
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVK----------VLKKDVILQDDDVECTMTEKRILSL 79
Query: 748 I-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H + +L+CC + + V E++ L + +R + R
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA------------RAR 127
Query: 807 LQIA-IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
A I +A L ++H II+RD+K N+LLD E K+ADFG+ K G T
Sbjct: 128 FYAAEIISA--LMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--T 180
Query: 866 MSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
+ G+ Y APE Y V D ++ GV+L E++ G + L
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAV----DWWAMGVLLYEMLCGHAPFEAENEDDL 232
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 8e-11
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 39/220 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFI-AEIEILGTI-RHANI 753
+IG G +V + + A+K + +K +N + +++ E + H +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 754 VKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP-TRLQIA- 810
V L C +E S+L V EY+ L + Q L R A
Sbjct: 73 VGLHSCFQTE-SRLFFVIEYVNGGDLMFHMQ-------------RQRKLPEEHARFYSAE 118
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
I A L Y+H II+RD+K N+LLDSE K+ D+G+ K + G+ T S
Sbjct: 119 ISLA--LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFC 171
Query: 871 GSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE Y V D ++ GV++ E++ G+
Sbjct: 172 GTPNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGR 207
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 9e-11
Identities = 64/220 (29%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK---LNQKLEKEFIAEIEILG-TIRHANI 753
+IG G G+V F AVK + +K L +K EK ++E +L ++H +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVL---QKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 754 VKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA-I 811
V L + KL V +Y+ L L R+R + R A I
Sbjct: 102 VGLHFSFQTA-DKLYFVLDYINGGELFYHLQ-RERCF-----LEPR------ARFYAAEI 148
Query: 812 GAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+A L Y+H + I++RD+K NILLDS+ + DFGL K + T S
Sbjct: 149 ASA--LGYLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFC 200
Query: 871 GSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE Y V D + G VL E++ G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTV----DWWCLGAVLYEMLYGL 236
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 47/248 (18%), Positives = 84/248 (33%), Gaps = 76/248 (30%)
Query: 698 LIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHA---- 751
+G G G+V ID G VAVK + N + EI++L +
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS-----EIQVLEHLNTTDPNS 75
Query: 752 --NIVKLWC--------CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVL 801
V++ CI E L Y+++ ++ + + +
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELLGLSTYDFI-----------KENGFLPFRLDHIRKMA 124
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL-DSEFKA-------------- 846
+ QI + + ++H ++ H D+K NIL S++
Sbjct: 125 Y-----QIC----KSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172
Query: 847 ----KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVV 898
K+ DFG A + S + + Y APE ++ D++S G +
Sbjct: 173 NPDIKVVDFGSATY-----DDEHHSTLVSTRHYRAPEVILALGWSQP----CDVWSIGCI 223
Query: 899 LLELVTGK 906
L+E G
Sbjct: 224 LIEYYLGF 231
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 2e-10
Identities = 58/236 (24%), Positives = 89/236 (37%), Gaps = 49/236 (20%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFI----------AEIEILGT 747
++G G G+V + G E AVK L+K+ + E +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVK----------ILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 748 I-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+ + +L C + + V EY+ L + R
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP------------HAV 124
Query: 807 LQIA-IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
A I L ++ II+RD+K N++LDSE KIADFG+ K G T
Sbjct: 125 FYAAEIAIG--LFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--T 177
Query: 866 MSAVAGSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 917
G+ Y APE Y V D ++FGV+L E++ G+ G++ L
Sbjct: 178 TKTFCGTPDYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAPFEGEDEDEL 229
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 193 SNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM-SNLSSLEILALN 251
+N ++L L N K + P F L LK L++ +N +G +P + +L+ L +L L
Sbjct: 40 TNAQILYLHDNQITK--LEPGVFDSLINLKELYL-GSNQLGALPVGVFDSLTQLTVLDLG 96
Query: 252 GNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEE 309
N L +PS +F L +L +LF+ N L+ E+P +E L LT + L N L SIP
Sbjct: 97 TNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
Query: 310 -FGKLKNLQLLGLFSN 324
F +L +L LF N
Sbjct: 154 AFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF-LL 266
PA IP + L++ + + P +L +L+ L L N L A+P G+F L
Sbjct: 35 PAGIPTN------AQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSL 87
Query: 267 NNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSN 324
LT L L N L+ +PS+V + L L ++ + N LT +P +L +L L L N
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Query: 325 HL 326
L
Sbjct: 146 QL 147
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 98 NLTTIDLSS---NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
+ TT+D S S+P P T Q L L N P D + L+ + LG
Sbjct: 20 SGTTVDCRSKRHASVPAGIP------TNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73
Query: 155 NNFSGDIPRSI-GRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKPA 209
N +P + L++L L L N+ + F + L +L+ L + N K
Sbjct: 74 NQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDR----LVHLKELFMCCN---KLT 125
Query: 210 MIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGN 253
+P L L L + + L A LSSL L GN
Sbjct: 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 3e-10
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 39/220 (17%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFI-AEIEILGTI-RHANI 753
+IG G +V + + A++ + +K +N + +++ E + H +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVV---KKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 754 VKLWCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP-TRLQIA- 810
V L C +E S+L V EY+ L + Q L R A
Sbjct: 116 VGLHSCFQTE-SRLFFVIEYVNGGDLMFHMQ-------------RQRKLPEEHARFYSAE 161
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
I A L Y+H II+RD+K N+LLDSE K+ D+G+ K + G+ T S
Sbjct: 162 ISLA--LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFC 214
Query: 871 GSFGYFAPE----YAYTTKVNEKIDIYSFGVVLLELVTGK 906
G+ Y APE Y V D ++ GV++ E++ G+
Sbjct: 215 GTPNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGR 250
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 3e-10
Identities = 34/187 (18%), Positives = 53/187 (28%), Gaps = 34/187 (18%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVK--RIWNNRKLN---QKLEKEFIAEIEIL-------- 745
IG G G+V++ + VA+K I +N QK +E + EI I
Sbjct: 28 IGEGVFGEVFQTIADH--TPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSG 85
Query: 746 -GTIRHANIVKL--WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS--------- 793
R + L C+ LL+ + S + R
Sbjct: 86 EVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF 145
Query: 794 -----SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 848
+ + T I L + HRD+ N+LL K+
Sbjct: 146 GGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL--RFEHRDLHWGNVLLKKTSLKKL 203
Query: 849 ADFGLAK 855
K
Sbjct: 204 HYTLNGK 210
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 7e-10
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF-LL 266
P IP + + L++ + N +P+ +SN L ++ L+ N + + + F +
Sbjct: 26 PKGIPRD------VTELYL-DGNQFTLVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNM 77
Query: 267 NNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSMNNLTGSIPEE-FGKLKNLQLLGLFS 323
L L L N L IP + L L + L N+++ +PE F L L L + +
Sbjct: 78 TQLLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGA 135
Query: 324 N 324
N
Sbjct: 136 N 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDL 192
IP D+ + L GN F+ +P+ + L + L N N +F +
Sbjct: 29 IPRDVTEL------YLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSN----M 77
Query: 193 SNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILAL 250
+ L L L+YN + IP F LK L+ L + N I +PE A ++LS+L LA+
Sbjct: 78 TQLLTLILSYN---RLRCIPPRTFDGLKSLRLLSL-HGNDISVVPEGAFNDLSALSHLAI 133
Query: 251 NGN 253
N
Sbjct: 134 GAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNLDLS 129
VT + L T +P + + K+LT IDLS+N I F N T+L L LS
Sbjct: 32 DVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFS----NMTQLLTLILS 86
Query: 130 QNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMN 179
N IP D + L+ + L GN+ S +P LS L L + N
Sbjct: 87 YNRL-RCIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGAN 136
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 51/252 (20%), Positives = 80/252 (31%), Gaps = 80/252 (31%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHA----- 751
+G G G+V ++ AVK + N +K E +IL I++
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI-----EADILKKIQNDDINNN 96
Query: 752 NIVKLWC--------CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
NIVK C+ E +YE + + + +
Sbjct: 97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEII-----------TRNNYNGFHIEDIKLYCI- 144
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA----------------- 846
+I + L Y+ + H D+K NILLD +
Sbjct: 145 ----EIL----KALNYLR-KM--SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193
Query: 847 --------KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPE----YAYTTKVNEKIDIYS 894
K+ DFG A + ++ + Y APE + D++S
Sbjct: 194 YRTKSTGIKLIDFGCATF-----KSDYHGSIINTRQYRAPEVILNLGWDVS----SDMWS 244
Query: 895 FGVVLLELVTGK 906
FG VL EL TG
Sbjct: 245 FGCVLAELYTGS 256
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 1e-09
Identities = 42/209 (20%), Positives = 65/209 (31%), Gaps = 66/209 (31%)
Query: 79 SLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP 138
I K+ + LK + LS+N+I E L L+ L L +N
Sbjct: 31 HGMIPPIE-KMDATLSTLKACKHLALSTNNI--EKISSLSGMENLRILSLGRNL------ 81
Query: 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVL 198
I +I L + L+ L++ N +I LS +E
Sbjct: 82 --IKKIENLDAV-----------------ADTLEELWISYN--------QIASLSGIEK- 113
Query: 199 GLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE--AMSNLSSLEILALNGNHLE 256
L L+ L+M+ N I E ++ L LE L L GN L
Sbjct: 114 -------------------LVNLRVLYMSN-NKITNWGEIDKLAALDKLEDLLLAGNPLY 153
Query: 257 GAIPSG-------LFLLNNLTQLFLYDNI 278
+ ++ L L D +
Sbjct: 154 NDYKENNATSEYRIEVVKRLPNLKKLDGM 182
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 402 VPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISG-ELPSKTAWNLTR 460
+ +L + + + L +N ++ + L NL L L N I E A L
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILSLGRNLIKKIENLDAVADTLEE 97
Query: 461 LEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGK 519
L IS N+ + + G+ NL V SNN + ++ L +L L LLL GN L
Sbjct: 98 LWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155
Query: 520 LP 521
Sbjct: 156 YK 157
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 196 EVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSN-LSSLEILALNGNH 254
L L NS + F L L L++ N + +P + N L+SL L L+ N
Sbjct: 31 TYLDLETNSLKS--LPNGVFDELTSLTQLYL-GGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87
Query: 255 LEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEE-F 310
L+ ++P+G+F L L +L L N L +P V + +L D+ L N L S+P+ F
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVF 144
Query: 311 GKLKNLQLLGLFSN 324
+L +LQ + L N
Sbjct: 145 DRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 47/189 (24%)
Query: 98 NLTTIDLSS---NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
+ TT++ S S+P P + LDL N D ++ L + LGG
Sbjct: 8 SGTTVECYSQGRTSVPTGIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGG 61
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDLSNLEVLGLAYNSNFKPAM 210
N +L+ L L L N+ NG F K L+ L+ L L N
Sbjct: 62 NKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDK----LTQLKELALNTN------- 110
Query: 211 IPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEGAIPSGLF-LLNN 268
+L++L P+ L+ L+ L L N L+ ++P G+F L +
Sbjct: 111 ---------QLQSL-----------PDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTS 149
Query: 269 LTQLFLYDN 277
L ++L+DN
Sbjct: 150 LQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 243 SSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMN 300
+ L L N L+ L +LTQL+L N L +P+ V + LT ++LS N
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTN 86
Query: 301 NLTGSIPEE-FGKLKNLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSLSGV 353
L S+P F KL L+ L L +N L +P + K+ LK +++ N L V
Sbjct: 87 QLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSV 139
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 3e-09
Identities = 74/372 (19%), Positives = 120/372 (32%), Gaps = 121/372 (32%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN------ 752
+G G V+ +FVA+K + + + + + EI +L ++R+++
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMK-VVKS---AEHYTETALDEIRLLKSVRNSDPNDPNR 100
Query: 753 --IVKLWCC--ISSENSK--LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
+V+L IS N +V+E + L +W+ +S + L P
Sbjct: 101 EMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWI---IKS--------NYQGLPLPCV 148
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE----------------------- 843
+I QGL Y+H C +IIH D+K NILL
Sbjct: 149 KKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPS 206
Query: 844 --------------------------FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFA 877
K KIAD G A + T + Y +
Sbjct: 207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---CWVHKHFTEDIQ--TRQYRS 261
Query: 878 PEYAYTTKVNEKIDIYSFGVVLLELVTGK---EANYGDEHTS----LA-----------E 919
E + N DI+S + EL TG E + G+E+T +A +
Sbjct: 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 321
Query: 920 WA---------------WRHYAEEKPITDALDKGIAEPCYL--EEMTTVYRLALICTSTL 962
+H + KP L + + E EE L +
Sbjct: 322 LIVAGKYSKEFFTKKGDLKHITKLKPWG--LFEVLVEKYEWSQEEAAGFTDFLLPMLELI 379
Query: 963 PSSRPSMKEVLQ 974
P R + E L+
Sbjct: 380 PEKRATAAECLR 391
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 31/165 (18%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G++ ++ E+VA+K + Q L E+ ++ I +++
Sbjct: 17 IGCGNFGELRLGKNLYT-NEYVAIKLEPMKSRAPQ-LHLEYRFYKQLGSGD---GIPQVY 71
Query: 758 CCISSENSKLLVYEYMENQSLD--RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+V E + SL+ L R SL T L IAI
Sbjct: 72 YFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSL--------------KTVLMIAIQLIS 116
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK-----IADFGLAK 855
+ Y+H +I+RDVK N L+ I DF LAK
Sbjct: 117 RMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 48/165 (29%), Positives = 64/165 (38%), Gaps = 31/165 (18%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVKL 756
IGSG G +Y DI GE VA+K K Q L E +I ++ I +
Sbjct: 17 IGSGSFGDIYLGTDIAA-GEEVAIKLECVKTKHPQ-LHI----ESKIYKMMQGGVGIPTI 70
Query: 757 WCCISSENSKLLVYEYMENQSLD--RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
C + + ++V E + SL+ RK SL T L +A
Sbjct: 71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSL--------------KTVLLLADQMI 115
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILL---DSEFKAKIADFGLAKM 856
+ Y+H IHRDVK N L+ I DFGLAK
Sbjct: 116 SRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 31/166 (18%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G ++ ++ + VA+K Q L E+ + G I ++
Sbjct: 18 IGEGSFGVIFEGTNLLN-NQQVAIKFEPRRSDAPQ-LRDEYRTYKLLAGCT---GIPNVY 72
Query: 758 CCISSENSKLLVYEYMENQSLD--RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
+LV + + SL+ L GRK S+ T A
Sbjct: 73 YFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSV--------------KTVAMAAKQMLA 117
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK-----IADFGLAKM 856
+ +H +++RD+K N L+ + DFG+ K
Sbjct: 118 RVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 5e-08
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 242 LSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLS 298
L+ L L+L+ N ++ ++P G+F L LT L+L++N L +P+ V + +L ++ L
Sbjct: 51 LTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALD 108
Query: 299 MNNLTGSIPEE-FGKLKNLQLLGLFSN 324
N L S+P+ F +L +LQ + L +N
Sbjct: 109 TNQLK-SVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 243 SSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSM 299
SS L L N L+ ++P G+F L LT+L L N + +P V + KLT + L
Sbjct: 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHE 85
Query: 300 NNLTGSIPEE-FGKLKNLQLLGLFSNHL 326
N L S+P F KL L+ L L +N L
Sbjct: 86 NKLQ-SLPNGVFDKLTQLKELALDTNQL 112
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 44/147 (29%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDL 192
IPS R+ +L N +L++L L L N+ +G F K L
Sbjct: 26 IPSSATRL------ELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK----L 75
Query: 193 SNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALN 251
+ L +L L N KL++L P L+ L+ LAL+
Sbjct: 76 TKLTILYLHEN----------------KLQSL-----------PNGVFDKLTQLKELALD 108
Query: 252 GNHLEGAIPSGLF-LLNNLTQLFLYDN 277
N L+ ++P G+F L +L +++L+ N
Sbjct: 109 TNQLK-SVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 87 QKIPPIICD-LKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI 141
Q +P + D L LT + LS N I G F + TKL L L +N +P+ +
Sbjct: 41 QSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKL----TKLTILYLHENKLQS-LPNGV 95
Query: 142 -DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMN 179
D+++ L+ + L N +P I RL+ LQ ++L+ N
Sbjct: 96 FDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 134
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 5e-08
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 241 NLSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDL 297
L L L L N L I F +++ +L L +N + EI + + L +L ++L
Sbjct: 52 RLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNL 109
Query: 298 SMNNLTGSIPEE-FGKLKNLQLLGLFSN 324
N ++ + F L +L L L SN
Sbjct: 110 YDNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 87 QKIPP--IICDLKNLTTIDLSSNSI----PGEFPEFLYNCTKLQNLDLSQNYFVGPIPSD 140
+I + L +L ++L N + P F + +Q L L +N I +
Sbjct: 42 GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF----EGASHIQELQLGENKI-KEISNK 96
Query: 141 I-DRISGLQCIDLGGNNFSGDIPRSI-GRLSELQTLYLYMNEFN 182
+ + L+ ++L N S + L+ L +L L N FN
Sbjct: 97 MFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSV--EALKLTDIDLSMNNLTGSIPEE-FGKLK 314
IP + L + T+L L DN L + L ++L N LT I F
Sbjct: 22 EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGAS 78
Query: 315 NLQLLGLFSNHLSGEVPASI-GKIPALKKFKVFNNSLSGV 353
++Q L L N + E+ + + LK +++N +S V
Sbjct: 79 HIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQISCV 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 1e-07
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 211 IPIEFGMLKKLKTLWMTEANLIGEIP-EAMSNLSSLEILALNGNHLEGAIPSGLFL-LNN 268
+ L L++ + + + L L L + + L + F
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 269 LTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLT 303
L++L L N L +V+ L L ++ LS N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 5e-07
Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 32/134 (23%)
Query: 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204
SGL+C G + D + L LY+ +
Sbjct: 11 SGLRCTRDG----ALDSLHHLPGAENLTELYIENQQHLQHLELRD--------------- 51
Query: 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEI-PEAMSNLSSLEILALNGNHLEGAIPSGL 263
L +L+ L + + + + + P+A L L L+ N LE ++
Sbjct: 52 ----------LRGLGELRNLTIVK-SGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKT 99
Query: 264 FLLNNLTQLFLYDN 277
+L +L L N
Sbjct: 100 VQGLSLQELVLSGN 113
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 227 TEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFL-LNNLTQLFLYDNILSGEIPS 285
T + + + +L L + + L L L + + L P
Sbjct: 16 TRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74
Query: 286 SVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326
+ +L+ ++LS N L S+ + + +LQ L L N L
Sbjct: 75 AFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 8e-06
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 495 EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVS-WTSLNNLNLARNELSGEIPKAIGSLLV 553
+ L +L L ++ + L + + L NL + ++ L P A
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 554 MVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
+ L+LS N + L L LS N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 1e-05
Identities = 24/135 (17%), Positives = 36/135 (26%), Gaps = 29/135 (21%)
Query: 409 CRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT---AWNLTRLEISN 465
+ + + + L NL+ L + + L + L L I
Sbjct: 7 PHGSSGL-RCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 466 NRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIV 525
+ + F LS LN L N L L + V
Sbjct: 66 SGLR-FVAPDA---------------FHF-----TPRLSRLN---LSFNALE-SLSWKTV 100
Query: 526 SWTSLNNLNLARNEL 540
SL L L+ N L
Sbjct: 101 QGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 6e-05
Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Query: 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----LTDIDLSMNNLTGSIPEE-FGK 312
L NLT+L++ + + L+ L ++ + + L + + F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLEL--RDLRGLGELRNLTIVKSGLR-FVAPDAFHF 78
Query: 313 LKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSL 350
L L L N L + + +L++ + N L
Sbjct: 79 TPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 2e-04
Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 9/117 (7%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSN----SIPGEFPEFLYNCTKLQN 125
C + +G+ + +NLT + + + + L +L+N
Sbjct: 5 CCPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLE---LRDLRGLGELRN 60
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182
L + ++ P L ++L N +++ LS LQ L L N +
Sbjct: 61 LTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 31/174 (17%)
Query: 699 IGSGGSGQVY--------RIDINGAGEFVAVK------RIWNNRKLNQKLEKEF-IAEIE 743
G +Y D + ++K R++N + Q+ K + + +
Sbjct: 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHW 803
L + I ++ Y ++ SL R SL S +HVL
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDK----YRFLVLPSLGR-------SLQSALDVSPKHVLSE 158
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI--ADFGLAK 855
+ LQ+A L ++H + +H +V + NI +D E ++++ A +G A
Sbjct: 159 RSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 31/164 (18%)
Query: 699 IGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA-NIVKL 756
IGSG G++Y +I E VA+K K Q L E +I ++ I +
Sbjct: 15 IGSGSFGEIYLGTNIQT-NEEVAIKLENVKTKHPQ-LLY----ESKIYRILQGGTGIPNV 68
Query: 757 WCCISSENSKLLVYEYMENQSLD--RWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ +LV + + SL+ RK SL T L +A
Sbjct: 69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSL--------------KTVLMLADQMI 113
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK---IADFGLAK 855
+ ++H +HRD+K N L+ +A I DFGLAK
Sbjct: 114 NRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
+ G+I + +LE L+L L S L L L +L L +N + G + E
Sbjct: 36 SNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK 93
Query: 290 L-KLTDIDLSMNNLTG-SIPEEFGKLKNLQLLGLFSN 324
L LT ++LS N L S E KL+ L+ L LF+
Sbjct: 94 LPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
+ + KI + + NL + L + + L KL+ L+LS+N G +
Sbjct: 31 LDNCKSNDG-KIEGLTAEFVNLEFLSLINVGL--ISVSNLPKLPKLKKLELSENRIFGGL 87
Query: 138 PSDIDRISGLQCIDLGGNNFS--GDIPRSIGRLSELQTLYLYMNE 180
+++ L ++L GN + + +L L++L L+ E
Sbjct: 88 DMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNCE 131
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 191 DLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILAL 250
+ + L L + + + L+ L + + + + L L+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGL-TAEFVNLEFLSLIN-VGLISV-SNLPKLPKLKKLEL 78
Query: 251 NGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----LTDIDLSMN---NLT 303
+ N + G + L NLT L L N L S++E LK L +DL NL
Sbjct: 79 SENRIFGGLDMLAEKLPNLTHLNLSGNKLKD--ISTLEPLKKLECLKSLDLFNCEVTNLN 136
Query: 304 GSIPEEFGKLKNLQLL 319
F L L L
Sbjct: 137 DYRESVFKLLPQLTYL 152
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 241 NLSSLEILALNGNHL-EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL----KLTDI 295
+++ L L+ +G I NL L L + L SV L KL +
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKLKKL 76
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFK 344
+LS N + G + KL NL L L N L I + LKK +
Sbjct: 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-----DISTLEPLKKLE 120
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 34/180 (18%)
Query: 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY 132
+ +G+ ++ + + ++ L +D ++ + L+ L L
Sbjct: 3 SGSSGMDMKRRIHLELRNRTPAAVRELV-LDNCKSNDG-KIEGLTAEFVNLEFLSLINV- 59
Query: 133 FVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDL 192
+ +S L +L +L+ L L N G L
Sbjct: 60 -------GLISVSNLP------------------KLPKLKKLELSENRIFGGLDMLAEKL 94
Query: 193 SNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE----AMSNLSSLEIL 248
NL L L+ N + + L+ LK+L + + + + L L L
Sbjct: 95 PNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFN-CEVTNLNDYRESVFKLLPQLTYL 152
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
+T F ++ +SL + + + + L L ++LS N I G L +
Sbjct: 42 EGLTAEFVNLEFLSLINVGLI-SVS-NLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99
Query: 126 LDLSQNYFVGPIPSDIDRISG---LQCIDLGGN 155
L+LS N S ++ + L+ +DL
Sbjct: 100 LNLSGNKLKD--ISTLEPLKKLECLKSLDLFNC 130
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 243 SSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSM 299
+ + L LN N + + G+F L NL QL+ N L+ IP+ V + L +LT +DL+
Sbjct: 33 TDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90
Query: 300 NNLTGSIPE-EFGKLKNLQLLGLFSN 324
N+L SIP F LK+L + L++N
Sbjct: 91 NHLK-SIPRGAFDNLKSLTHIYLYNN 115
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 6e-07
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 243 SSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV-EAL-KLTDIDLSM 299
++ ++L L N + + G+F L LT+L L +N L+ +P+ V + L +LT + L+
Sbjct: 30 TTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLND 87
Query: 300 NNLTGSIPEE-FGKLKNLQLLGLFSN 324
N L SIP F LK+L + L +N
Sbjct: 88 NQLK-SIPRGAFDNLKSLTHIWLLNN 112
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-07
Identities = 42/280 (15%), Positives = 95/280 (33%), Gaps = 49/280 (17%)
Query: 97 KNLTTIDLSSNSIPGE-----FPEFLYNCTKLQNLDLSQNYF----VGPIPSDIDRI-SG 146
+T++DLS N++ F + +L+LS N + + I +
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 147 LQCIDLGGNNFSGDIPRSIGRL-----SELQTLYLYMNEFNGTFPKEIGDL-----SNLE 196
+ ++L GN S + + + L L N+F+ E +++
Sbjct: 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141
Query: 197 VLGLAYNSNFKPAMIPIEFGMLK----KLKTLWMTEANLIG-----EIPEAMSNL-SSLE 246
L L N + +L + +L + N + E+ + ++++ +S+
Sbjct: 142 SLNLRGN-DLGIKSSDELIQILAAIPANVNSLNLRG-NNLASKNCAELAKFLASIPASVT 199
Query: 247 ILALNGNHL--EGAIPSGLFLLNN---LTQLFLYDNILSGEIPSSVEAL-----KLTDID 296
L L+ N L + + + L L N L G +++ L L +
Sbjct: 200 SLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVY 259
Query: 297 LSMNNLTG-------SIPEEFGKLKNLQLLGLFSNHLSGE 329
L + + ++ F ++ + L+ +
Sbjct: 260 LDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 42/255 (16%), Positives = 89/255 (34%), Gaps = 48/255 (18%)
Query: 115 EFLYNCTKLQNLDLSQNYFVGPIPSDIDRIS--------GLQCIDLGGNNFSGDIPRSIG 166
EF + +LDLS N + + ++L GN+ +
Sbjct: 16 EFTSIPHGVTSLDLSLNNL---YSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELV 72
Query: 167 RL-----SELQTLYLYMNEFNGTFPKEIGDL-----SNLEVLGLAYNSNFKPAMIPIEFG 216
++ + + +L L N + E+ + VL L +N +F
Sbjct: 73 QILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWN-DFSSKSSSEFKQ 131
Query: 217 MLKK----LKTLWMTEANLIGE-----IPEAMSNL-SSLEILALNGNHL--EGA--IPSG 262
+ +L + N +G + + ++ + +++ L L GN+L + +
Sbjct: 132 AFSNLPASITSLNLRG-NDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF 190
Query: 263 LFLLN-NLTQLFLYDNILSGE-IPSSVEALK-----LTDIDLSMNNLTGS----IPEEFG 311
L + ++T L L N+L + + ++L +N L G +
Sbjct: 191 LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKD 250
Query: 312 KLKNLQLLGLFSNHL 326
LK+LQ + L + +
Sbjct: 251 SLKHLQTVYLDYDIV 265
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 36/176 (20%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF-----------IAEIEILG 746
IGSGG G +Y E A + + N L E I +
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103
Query: 747 TIRHANIVKLWCCISSENSK----LLVYEYMENQSL-DRWLHGRKRSLVSGSSSVHQHVL 801
+ + I + +E +V E + L
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKK------------ 150
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI--ADFGLAK 855
T LQ+ I L Y+H + +H D+K++N+LL + ++ AD+GL+
Sbjct: 151 --STVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSY 201
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
+ LR I I + L ID S N I + +L+ L ++ N
Sbjct: 24 LDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLLVNNNRICRIG 80
Query: 138 PSDIDRISGLQCIDLGGNNFS--GDIPRSIGRLSELQTLYLYMN 179
+ L + L N+ GD+ + L L L + N
Sbjct: 81 EGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 228 EANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSV 287
A LI + + +N L L G + I + L+ + DN + +
Sbjct: 5 TAELIEQAAQ-YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-----KL 57
Query: 288 EAL----KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKF 343
+ +L + ++ N + L +L L L +N L +G + L
Sbjct: 58 DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-----ELGDLDPLASL 112
Query: 344 K 344
K
Sbjct: 113 K 113
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 24/134 (17%), Positives = 37/134 (27%), Gaps = 28/134 (20%)
Query: 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154
+ +DL IP + +D S N +I ++ G
Sbjct: 17 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDN--------EIRKLDGFPL----- 62
Query: 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE 214
L L+TL + N L +L L L NS + +
Sbjct: 63 -------------LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DP 108
Query: 215 FGMLKKLKTLWMTE 228
LK L L +
Sbjct: 109 LASLKSLTYLCILR 122
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 191 DLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILAL 250
+ L L K +I L + + ++ N I ++ + L L+ L +
Sbjct: 17 NAVRDRELDLRGY---KIPVIENLGATLDQFDAIDFSD-NEIRKL-DGFPLLRRLKTLLV 71
Query: 251 NGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----LTDIDLSMNNLT 303
N N + L +LT+L L +N L ++ L LT + + N +T
Sbjct: 72 NNNRICRIGEGLDQALPDLTELILTNNSLVE--LGDLDPLASLKSLTYLCILRNPVT 126
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 36/177 (20%), Positives = 49/177 (27%), Gaps = 58/177 (32%)
Query: 103 DLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIP 162
L++ I E N + + LDL I I L
Sbjct: 3 KLTAELI--EQAAQYTNAVRDRELDLRGY--------KIPVIENLGA------------- 39
Query: 163 RSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLK 222
L + + N EI L +L++LK
Sbjct: 40 ----TLDQFDAIDFSDN--------EIRKLDGFP--------------------LLRRLK 67
Query: 223 TLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEG-AIPSGLFLLNNLTQLFLYDN 277
TL + N I I E + L L L L N L L L +LT L + N
Sbjct: 68 TLLV-NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 3e-06
Identities = 41/304 (13%), Positives = 87/304 (28%), Gaps = 35/304 (11%)
Query: 30 QSPNTEERTILLNLKQQLGNPPSL----QSWTSTSSPCDWPEITCTFNSVTGISLRHKDI 85
++ ++ K + + + +++ I
Sbjct: 41 KNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKEMKVEAKKYALSYDEAEEGVNLMDKI 100
Query: 86 TQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRIS 145
+ + + N K + + F G I + IS
Sbjct: 101 LKDKKLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHF---EGLFWGDIDFEEQEIS 157
Query: 146 GLQCIDLGGN------------NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIG--D 191
++ +DL + ++ L++L + + ++I D
Sbjct: 158 WIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEF-------GMLKKLKTLWMTEANLIGEIPEAMSN--- 241
L NLE L L + LK L + +A + E
Sbjct: 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDI 277
Query: 242 LSSLEILALNGNHL--EGA--IPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDL 297
L LE + ++ L EGA + + + +L + + N LS E+ ++ ID+
Sbjct: 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDV 337
Query: 298 SMNN 301
S +
Sbjct: 338 SDSQ 341
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 7e-05
Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 400 GAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAW--- 456
+ L L +++ + + L G NL SL + + +
Sbjct: 162 VDLSPVLDAMPLLNNLKI---KGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 457 -NLTRLEI----SNNRFSGQIQR-----GVGSWKNLIVFKASNNLFSGEIPVELTS---L 503
NL +L + + F G + + NL + + L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 504 SHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDL 559
L T+ + L+ + L + L +N+ N LS E+ K + L + +D+
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDV 337
Query: 560 SGNQ 563
S +Q
Sbjct: 338 SDSQ 341
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 4e-04
Identities = 23/188 (12%), Positives = 61/188 (32%), Gaps = 19/188 (10%)
Query: 419 SNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGS 478
S +L L L++L + + + K NL LEI + + +
Sbjct: 157 SWIEQVDLSPVLDAMPLLNNLKIKGTN-NLSIGKKPRPNLKSLEIISGGLPDSVVEDILG 215
Query: 479 W-----KNLIVFKASNNLFSGEIPVEL------TSLSHLNTLLLDGNKLSGKLPSQIVS- 526
+ L+++ + +L L + + + +
Sbjct: 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLES 275
Query: 527 --WTSLNNLNLARNELSGE----IPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTF 580
L ++++ L+ E + + + + +++ N S E+ E+ +
Sbjct: 276 DILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKI 335
Query: 581 NLSSNKLY 588
++S ++ Y
Sbjct: 336 DVSDSQEY 343
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 41/180 (22%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKR---IWNNRKLNQKLEKEF-----------IAEIE 743
IG GG G +Y D+N E V + N L E I +
Sbjct: 42 PIGQGGFGCIYLADMNS-SESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWI 100
Query: 744 ILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWL------HGRKRSLVSGSSSVH 797
+++ + K W + Y +M L + ++ S
Sbjct: 101 RTRKLKYLGVPKYWGS-GLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSR-------- 151
Query: 798 QHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI--ADFGLAK 855
T LQ+++ L Y+H +H D+K+SN+LL+ + ++ D+GLA
Sbjct: 152 ------KTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 191 DLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILAL 250
S+++ L L + + + + + ++L+ L + I + L+ L+ L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGL-TDEFEELEFLSTIN-VGLTSI-ANLPKLNKLKKLEL 71
Query: 251 NGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK----LTDIDLSMNNLT 303
+ N + G + NLT L L N + S++E LK L +DL +T
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKD--LSTIEPLKKLENLKSLDLFNCEVT 126
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 241 NLSSLEILALNGNHL-EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL----KLTDI 295
S ++ L L+ + EG + L L + L+ S+ L KL +
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLPKLNKLKKL 69
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFK 344
+LS N ++G + K NL L L N + + I LKK +
Sbjct: 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK-----DLSTIEPLKKLE 113
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 28/135 (20%)
Query: 95 DLKNLTTIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153
++ + L ++ G+ +L+ L + I+ L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINV--------GLTSIANLP----- 61
Query: 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI 213
+L++L+ L L N +G NL L L+ N K
Sbjct: 62 -------------KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN-KIKDLSTIE 107
Query: 214 EFGMLKKLKTLWMTE 228
L+ LK+L +
Sbjct: 108 PLKKLENLKSLDLFN 122
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQN 125
+T F + +S + +T I + L L ++LS N + G C L +
Sbjct: 35 EGLTDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92
Query: 126 LDLSQNYFVGPIPSDIDRISG---LQCIDLGGN 155
L+LS N S I+ + L+ +DL
Sbjct: 93 LNLSGNKIKD--LSTIEPLKKLENLKSLDLFNC 123
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-05
Identities = 37/251 (14%), Positives = 81/251 (32%), Gaps = 27/251 (10%)
Query: 97 KNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRI----SGLQ 148
+ + T+ + +S + E + T L+ L+ F P D++ I L
Sbjct: 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223
Query: 149 CIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKP 208
+ +G + + L+ + P++ +L L S P
Sbjct: 224 SVKVGDFEILELV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP 282
Query: 209 AMIPIEFGMLKKLKTLWMTEANLIGE-IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLN 267
+PI F +++ L + A L E + +LE+L + +
Sbjct: 283 NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCK 342
Query: 268 NLTQLFLYDNILSGEIPSSVEAL-------------KLTDIDLSMNNLT----GSIPEEF 310
L +L + + + +L + + ++++T SI
Sbjct: 343 QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYL 402
Query: 311 GKLKNLQLLGL 321
L + +L+ L
Sbjct: 403 KNLCDFRLVLL 413
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 48/309 (15%), Positives = 98/309 (31%), Gaps = 35/309 (11%)
Query: 68 ITCTFNSVTGISLRHKDIT-QKIPPIICDLKNLTTIDLSSNSIPGE--FPEFLYNCTKLQ 124
++ ++ + I L+ +T + I KN + LSS C L+
Sbjct: 100 MSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLK 159
Query: 125 NLDLSQNYFVGPIPSDIDRIS----GLQCIDLGG--NNFSGDIPRSIG-RLSELQTLYLY 177
LDL ++ + L +++ + S + R L++L L
Sbjct: 160 ELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLN 219
Query: 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNF----KPAMIPIEFGMLKKLKTLWMTEANLIG 233
+ LE LG + + + + K+L+ L +
Sbjct: 220 RAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPA 279
Query: 234 EIPEAMSNLSSLEILALNGNHL-EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-- 290
+P S S L L L+ + + L L +L++ D I + +E L
Sbjct: 280 YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIED----AGLEVLAS 335
Query: 291 ---KLTDIDLSM---------NNLTGSIPEEFGK-LKNLQLLGLFSNHLSGEVPASIGKI 337
L ++ + LT L+ + F ++ +I +
Sbjct: 336 TCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN 395
Query: 338 -PALKKFKV 345
P + +F++
Sbjct: 396 RPNMTRFRL 404
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1024 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-63 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 4e-63 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-62 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 8e-59 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-58 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 6e-58 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 6e-58 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-57 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 6e-57 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-57 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 9e-57 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-56 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-56 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 9e-56 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-55 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-55 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-55 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-55 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-55 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-55 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 8e-55 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-54 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 8e-54 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-53 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-53 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-52 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-51 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-51 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-51 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-49 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-49 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-49 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 8e-49 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-48 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-45 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 9e-45 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-44 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-44 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 4e-44 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 8e-43 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-42 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-42 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-42 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-41 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-41 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-41 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-40 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-40 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-40 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 8e-40 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 7e-39 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-38 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-37 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-37 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-36 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-35 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-33 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-33 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-30 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-30 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 6e-29 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-27 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-19 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-10 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-27 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 9e-21 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-18 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-14 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-10 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-09 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-11 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-18 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-14 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.001 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.004 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-11 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 6e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-04 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 3e-06 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 7e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 1e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.002 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.004 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 7e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.002 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 4e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 5e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.001 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 6e-04 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (547), Expect = 1e-63
Identities = 75/285 (26%), Positives = 115/285 (40%), Gaps = 32/285 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IGSG G VY+ +G VAVK + N + + F E+ +L RH NI+
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
S+ +V ++ E SL LH + + IA AQG
Sbjct: 70 MGY-STAPQLAIVTQWCEGSSLYHHLHIIETKF------------EMIKLIDIARQTAQG 116
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ Y+H IIHRD+KS+NI L + KI DFGLA + ++ H ++GS +
Sbjct: 117 MDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 877 APEYAYT---TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933
APE + + D+Y+FG+VL EL+TG+ Y + + P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLS 232
Query: 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + + RL C RP ++L +
Sbjct: 233 KVRSNCPKA--------MKRLMAECLKKKRDERPLFPQILASIEL 269
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 214 bits (545), Expect = 4e-63
Identities = 70/321 (21%), Positives = 138/321 (42%), Gaps = 36/321 (11%)
Query: 670 DPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYR---IDINGAGEFVAVKRIWN 726
DP T++ + F + +S + +IG+G G+V FVA+K +
Sbjct: 5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-- 62
Query: 727 NRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRK 786
+K ++F++E I+G H N++ L ++ +++ E+MEN SLD +L
Sbjct: 63 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-- 120
Query: 787 RSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 846
+ + + G A G+ Y+ +HRD+ + NIL++S
Sbjct: 121 ----------NDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVC 167
Query: 847 KIADFGLAKMLAKQGEPHTMSAVAGSFG---YFAPEYAYTTKVNEKIDIYSFGVVLLELV 903
K++DFGL++ L T ++ G + APE K D++S+G+V+ E++
Sbjct: 168 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 227
Query: 904 TGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLP 963
+ E Y D + + +A+++ P ++ + +++L L C
Sbjct: 228 SYGERPYWDMT-------------NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 274
Query: 964 SSRPSMKEVLQILRRCCPTEN 984
+ RP +++ L + N
Sbjct: 275 NHRPKFGQIVNTLDKMIRNPN 295
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 212 bits (539), Expect = 3e-62
Identities = 68/300 (22%), Positives = 115/300 (38%), Gaps = 34/300 (11%)
Query: 697 NLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA 751
IG G G+V++ + VAVK + + + ++ +F E ++ +
Sbjct: 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEFDNP 76
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQH-----------V 800
NIVKL + L++EYM L+ +L V S
Sbjct: 77 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQ 860
L +L IA A G+ Y+ +HRD+ + N L+ KIADFGL++ +
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 193
Query: 861 GEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 920
A + PE + + + D++++GVVL E+ + Y
Sbjct: 194 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------ 247
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 980
+ + + G C +Y L +C S LP+ RPS + +IL+R C
Sbjct: 248 -------HEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 202 bits (516), Expect = 8e-59
Identities = 62/307 (20%), Positives = 120/307 (39%), Gaps = 50/307 (16%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+ +G+G G V+++ +G +A K I + ++ + + I E+++L IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ S+ + E+M+ SLD+ L R + +++I +G
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGR-------------IPEQILGKVSIAVIKG 116
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+ +I+HRDVK SNIL++S + K+ DFG++ L ++ G+ Y
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYM 170
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+PE T + + DI+S G+ L+E+ G+ + L + T
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 230
Query: 937 KGIAEPCYLEEMTTVYRLALI-----------------------------CTSTLPSSRP 967
+ P M + +A+ C P+ R
Sbjct: 231 RTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERA 290
Query: 968 SMKEVLQ 974
+K+++
Sbjct: 291 DLKQLMV 297
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 3e-58
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 696 SNLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
+ +IG G G VY +D +G AVK + NR + +F+ E I+ H N
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 753 IVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
++ L C+ SE S L+V YM++ L ++ + + +
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP------------TVKDLIGFGL 137
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG--EPHTMSAV 869
A+G+ ++ + +HRD+ + N +LD +F K+ADFGLA+ + + H +
Sbjct: 138 QVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 194
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ A E T K K D++SFGV+L EL+T Y D + + +
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRR 252
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT---ENY 985
+ +P Y + +Y + L C RPS E++ + T E+Y
Sbjct: 253 LL---------QPEYCPD--PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 300
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (505), Expect = 6e-58
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGE----FVAVKRIWNNRKLNQKLEKEFIAEIEILG 746
S +T +IG+G G+VY+ + + VA+K + +K +F+ E I+G
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMG 64
Query: 747 TIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR 806
H NI++L IS +++ EYMEN +LD++L +
Sbjct: 65 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD------------GEFSVLQL 112
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-HT 865
+ + G A G M + +HRD+ + NIL++S K++DFGL+++L E +T
Sbjct: 113 VGMLRGIAAG---MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
S + APE K D++SFG+V+ E++T E Y +
Sbjct: 170 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS----------- 218
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ A++ G P ++ + +Y+L + C + RP +++ IL +
Sbjct: 219 --NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (504), Expect = 6e-58
Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 30/282 (10%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG+G G+ +I G+ + K + + + + ++ ++E+ +L ++H NIV+
Sbjct: 10 YTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 68
Query: 757 -WCCISSENSKL-LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
I N+ L +V EY E L + + + L L++
Sbjct: 69 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE---------RQYLDEEFVLRVMTQLT 119
Query: 815 QGLCYMH--HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
L H D ++HRD+K +N+ LD + K+ DFGLA++L + A G+
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGT 177
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
Y +PE NEK DI+S G +L EL LA P
Sbjct: 178 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP-- 235
Query: 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
Y +E+ + + RPS++E+L+
Sbjct: 236 ---------YRYSDEL---NEIITRMLNLKDYHRPSVEEILE 265
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (499), Expect = 4e-57
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G+G G+V+ NG VAVK + K F+AE ++ ++H +V+L
Sbjct: 19 ERLGAGQFGEVWMGYYNG-HTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ ++ + ++ EYMEN SL +L L L +A A+G
Sbjct: 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSG-----------IKLTINKLLDMAAQIAEG 121
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ ++ IHRD++++NIL+ KIADFGLA+++ + E +
Sbjct: 122 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWT 177
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEWAWRHYAEEKPITDAL 935
APE K D++SFG++L E+VT Y G + + + R Y +P
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP----- 232
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
EE+ Y+L +C P RP+ + +L
Sbjct: 233 ------DNCPEEL---YQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 6e-57
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 34/286 (11%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
SL +G G G+V+ NG VA+K + K + F+ E +++ +RH
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRH 71
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ +S E +V EYM SL +L G L P + +A
Sbjct: 72 EKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETG-----------KYLRLPQLVDMA 119
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
A G+ Y+ +HRD++++NIL+ K+ADFGLA+++ + E
Sbjct: 120 AQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAK 175
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
+ APE A + K D++SFG++L EL T Y +
Sbjct: 176 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------------NRE 222
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ D +++G PC E +++ L C P RP+ + + L
Sbjct: 223 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (495), Expect = 8e-57
Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 40/290 (13%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
+ L IG G G V D G VAVK I N + F+AE ++ +R
Sbjct: 6 MKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCI-----KNDATAQAFLAEASVMTQLR 58
Query: 750 HANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
H+N+V+L + + +V EYM SL +L R RS VL L+
Sbjct: 59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-----------VLGGDCLLK 107
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSA 868
++ + + Y+ +HRD+ + N+L+ + AK++DFGL K T
Sbjct: 108 FSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDT 159
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
+ APE K + K D++SFG++L E+ + Y
Sbjct: 160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------------L 206
Query: 929 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
K + ++KG VY + C + RPS ++ + L
Sbjct: 207 KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (496), Expect = 9e-57
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 34/286 (11%)
Query: 695 ESNLIGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
E +GSG G V + + + VAVK + N + L+ E +AE ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPY 69
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
IV++ +E+ +LV E E L+++L + + +++
Sbjct: 70 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH-------------VKDKNIIELVHQ 115
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML-AKQGEPHTMSAVAG 871
+ G+ Y+ +HRD+ + N+LL ++ AKI+DFGL+K L A + +
Sbjct: 116 VSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 872 SFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
++APE K + K D++SFGV++ E + + Y +
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-------------GSEV 219
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
T L+KG C +Y L +C + +RP V LR
Sbjct: 220 TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (496), Expect = 3e-56
Identities = 58/295 (19%), Positives = 105/295 (35%), Gaps = 33/295 (11%)
Query: 698 LIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHA 751
++GSG G+V I G VAVK + K + + ++E++++ + H
Sbjct: 44 VLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKMMTQLGSHE 101
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSL----------VSGSSSVHQHVL 801
NIV L + L++EY L +L ++ +VL
Sbjct: 102 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 161
Query: 802 HWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQG 861
+ L A A+G+ ++ +HRD+ + N+L+ KI DFGLA+ +
Sbjct: 162 TFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 218
Query: 862 EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 921
+ APE + K D++S+G++L E+ + Y
Sbjct: 219 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP------- 271
Query: 922 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQIL 976
+ + G +Y + C + RPS + L
Sbjct: 272 -----VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 8e-56
Identities = 69/323 (21%), Positives = 119/323 (36%), Gaps = 50/323 (15%)
Query: 689 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI 748
I ++ IG G G+V+R G E VAVK ++ AEI +
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWRG--EEVAVKIF----SSREERSWFREAEIYQTVML 54
Query: 749 RHANIVKLWCCISSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP 804
RH NI+ + +N LV +Y E+ SL +L+ ++ +
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--------------RYTVTVE 100
Query: 805 TRLQIAIGAAQGLCYMHHDC-----TPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
+++A+ A GL ++H + P I HRD+KS NIL+ IAD GLA
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160
Query: 860 QGEP--HTMSAVAGSFGYFAPEYAYT------TKVNEKIDIYSFGVVLLELVTGKEANYG 911
+ + G+ Y APE + ++ DIY+ G+V E+
Sbjct: 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220
Query: 912 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCY----------LEEMTTVYRLALICTST 961
E + + P + + K + E E + + ++ C
Sbjct: 221 HEDY---QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277
Query: 962 LPSSRPSMKEVLQILRRCCPTEN 984
++R + + + L + E
Sbjct: 278 NGAARLTALRIKKTLSQLSQQEG 300
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 193 bits (490), Expect = 9e-56
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 32/289 (11%)
Query: 690 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
+ +T + +G G G+VY VAVK + K + +EF+ E ++ I+
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIK 71
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H N+V+L + E ++ E+M +L +L R + L +
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----------QEVSAVVLLYM 120
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
A + + Y+ IHRD+ + N L+ K+ADFGL++++ +
Sbjct: 121 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 176
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ APE K + K D+++FGV+L E+ T + Y +
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------------DLS 223
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + L+K VY L C PS RPS E+ Q
Sbjct: 224 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (488), Expect = 1e-55
Identities = 65/281 (23%), Positives = 107/281 (38%), Gaps = 37/281 (13%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW- 757
IG G VY+ VA + +RKL + + F E E+L ++H NIV+ +
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCEL-QDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 75
Query: 758 ---CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
+ + +LV E M + +L +L K +
Sbjct: 76 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-------------MKIKVLRSWCRQIL 122
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
+GL ++H P IIHRD+K NI + KI D GLA + AV G+
Sbjct: 123 KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAVIGTP 177
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITD 933
+ APE Y K +E +D+Y+FG+ +LE+ T + ++ + +
Sbjct: 178 EFMAPEM-YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK 236
Query: 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ E + C R S+K++L
Sbjct: 237 VAIPEVKE------------IIEGCIRQNKDERYSIKDLLN 265
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (489), Expect = 2e-55
Identities = 61/300 (20%), Positives = 118/300 (39%), Gaps = 28/300 (9%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+ L+ +G+G G+V + + A VAVK + + + ++E+++L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVL 80
Query: 746 GTI-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVH-----QH 799
+ H NIV L + L++ EY L +L ++ S + +S +
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 800 VLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK 859
L L + A+G+ ++ IHRD+ + NILL KI DFGLA+ +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 860 QGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
+ APE + + D++S+G+ L EL + + Y +
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDS 255
Query: 920 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
++ + +G +Y + C P RP+ K+++Q++ +
Sbjct: 256 KFYKM----------IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (485), Expect = 2e-55
Identities = 60/279 (21%), Positives = 100/279 (35%), Gaps = 31/279 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G+V E VAVK + + K + EI I + H N+VK
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ N + L EY L + + P + G
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLMAG 115
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ Y+H I HRD+K N+LLD KI+DFGLA + ++ + G+ Y
Sbjct: 116 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 877 APEYAYTTKVN-EKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE + + E +D++S G+VL ++ G+ + W+ +
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
D L PS+R ++ ++ +
Sbjct: 233 DSA------------PLALLHKILVENPSARITIPDIKK 259
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 3e-55
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 36/289 (12%)
Query: 691 SSLTESNLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR 749
S LT IGSG G V+ +N + VA+K I + E++FI E E++ +
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNK--DKVAIKTI----REGAMSEEDFIEEAEVMMKLS 58
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H +V+L+ + LV+E+ME+ L +L + + T L +
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------------QRGLFAAETLLGM 106
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+ +G+ + +IHRD+ + N L+ K++DFG+ + + +
Sbjct: 107 CLDVCEGM---AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-T 162
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ +PE ++ + K D++SFGV++ E+ + + Y +
Sbjct: 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------------NS 209
Query: 930 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 978
+ + + G T VY++ C P RP+ +L+ L
Sbjct: 210 EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 191 bits (487), Expect = 5e-55
Identities = 71/308 (23%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 670 DPATWKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK 729
DP +L F + + ++ IG G G VY E VA+K++ + K
Sbjct: 1 DPDVAEL-------FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK 53
Query: 730 LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSL 789
+ + ++ I E+ L +RH N ++ C E++ LV EY + D +K
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP-- 111
Query: 790 VSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 849
L + GA QGL Y+H +IHRDVK+ NILL K+
Sbjct: 112 -----------LQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLG 157
Query: 850 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT---KVNEKIDIYSFGVVLLELVTGK 906
DFG A ++ ++ G+ + APE + + K+D++S G+ +EL K
Sbjct: 158 DFGSASIM------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
Query: 907 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR 966
+ + + E P + + E C +P R
Sbjct: 212 PPLFNM---NAMSALYHIAQNESPA-------LQSGHWSEYF---RNFVDSCLQKIPQDR 258
Query: 967 PSMKEVLQ 974
P+ + +L+
Sbjct: 259 PTSEVLLK 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 8e-55
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 699 IGSGGSGQVYR--IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G V + + VA+K + + + +E + E +I+ + + IV+L
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRL 74
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+E +LV E L ++L G++ + ++ + G
Sbjct: 75 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEI------------PVSNVAELLHQVSMG 121
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAGSFGY 875
+ Y+ +HRD+ + N+LL + AKI+DFGL+K L +T SA +
Sbjct: 122 MKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 178
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
+APE K + + D++S+GV + E ++ G++ + + + + E P
Sbjct: 179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP---- 234
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
P E+ Y L C RP V Q +R C
Sbjct: 235 -------PECPPEL---YALMSDCWIYKWEDRPDFLTVEQRMRAC 269
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 8e-55
Identities = 66/278 (23%), Positives = 107/278 (38%), Gaps = 35/278 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G VY + +A+K ++ + +E + E+EI +RH NI++L
Sbjct: 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ L+ EY ++ R L + A
Sbjct: 72 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------------FDEQRTATYITELANA 118
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y H ++IHRD+K N+LL S + KIADFG + + + G+ Y
Sbjct: 119 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYL 171
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
PE +EK+D++S GV+ E + GK + + E R E D +
Sbjct: 172 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---TYQETYKRISRVEFTFPDFVT 228
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+G + L PS RP ++EVL+
Sbjct: 229 EGARD------------LISRLLKHNPSQRPMLREVLE 254
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (482), Expect = 2e-54
Identities = 72/296 (24%), Positives = 116/296 (39%), Gaps = 27/296 (9%)
Query: 690 LSSLTESNLIGSGGSGQVY--RIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT 747
+ + ++IG G GQV RI +G A+KR+ ++ ++F E+E+L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 66
Query: 748 I-RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGR---KRSLVSGSSSVHQHVLHW 803
+ H NI+ L L EY + +L +L + ++ L
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 804 PTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP 863
L A A+G+ Y+ Q IHRD+ + NIL+ + AKIADFGL++ Q
Sbjct: 127 QQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVY 180
Query: 864 HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
+ + A E + D++S+GV+L E+V+ Y
Sbjct: 181 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------- 231
Query: 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ + L +G L VY L C P RPS ++L L R
Sbjct: 232 ----CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 283
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 8e-54
Identities = 59/283 (20%), Positives = 109/283 (38%), Gaps = 37/283 (13%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G G G+VY+ A K I +++ ++++ EI+IL + H NIVKL
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASCDHPNIVKL 74
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
EN+ ++ E+ ++D + +R L +
Sbjct: 75 LDAFYYENNLWILIEFCAGGAVDAVMLELERPL------------TESQIQVVCKQTLDA 122
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L Y+H +IIHRD+K+ NIL + K+ADFG++ + + G+ +
Sbjct: 123 LNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWM 177
Query: 877 APEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
APE + K D++S G+ L+E+ + ++ + A+ +P
Sbjct: 178 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL----LKIAKSEPP 233
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
T A + C +R + ++LQ
Sbjct: 234 TLAQPSRWSSNF--------KDFLKKCLEKNVDARWTTSQLLQ 268
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (472), Expect = 1e-53
Identities = 59/287 (20%), Positives = 110/287 (38%), Gaps = 34/287 (11%)
Query: 691 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH 750
LT +G+G G V G VA+K I K E EFI E +++ + H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSH 58
Query: 751 ANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 810
+V+L+ + + ++ EYM N L +L + H L++
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR------------HRFQTQQLLEMC 106
Query: 811 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVA 870
+ + Y+ +HRD+ + N L++ + K++DFGL++ + E +
Sbjct: 107 KDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSK 162
Query: 871 GSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
+ PE +K + K DI++FGV++ E+ + + Y
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------------NSE 209
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILR 977
+ + +G+ VY + C RP+ K +L +
Sbjct: 210 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 2e-53
Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN 752
++GSG G VY+ GE VA+K + + K KE + E ++ ++ + +
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVDNPH 72
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ +L ++ L+ + M L ++ K ++ L +
Sbjct: 73 VCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNI------------GSQYLLNWCVQ 119
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
A+G+ Y+ +++HRD+ + N+L+ + KI DFGLAK+L + + +
Sbjct: 120 IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
+ A E + D++S+GV + EL+T Y I+
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-------------ASEIS 223
Query: 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
L+KG P VY + + C SRP +E++ +
Sbjct: 224 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 6e-52
Identities = 58/294 (19%), Positives = 112/294 (38%), Gaps = 26/294 (8%)
Query: 691 SSLTESNLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL 745
+T S +G G G VY + + VA+K + N + + EF+ E ++
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 77
Query: 746 GTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
++V+L +S L++ E M L +L + ++ +
Sbjct: 78 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP---PSLSK 134
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
+Q+A A G+ Y++ + +HRD+ + N ++ +F KI DFG+ + + +
Sbjct: 135 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 191
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ +PE D++SFGVVL E+ T E Y
Sbjct: 192 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS----------- 240
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ + + +G ++ L +C P RPS E++ ++
Sbjct: 241 --NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 2e-51
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 29/294 (9%)
Query: 697 NLIGSGGSGQVYR-------IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI- 748
+G G GQV D VAVK + +K + I+E+E++ I
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIG 76
Query: 749 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPT 805
+H NI+ L + + ++ EY +L +L R+ + S S + L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT 865
+ A A+G+ Y+ + IHRD+ + N+L+ + KIADFGLA+ +
Sbjct: 137 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 866 MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ + APE + + D++SFGV+L E+ T + Y
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------------ 241
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ + L +G +Y + C +PS RP+ K++++ L R
Sbjct: 242 -PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (455), Expect = 3e-51
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 32/285 (11%)
Query: 699 IGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK 755
+G G G V R +G VAVK + + + +FI E+ + ++ H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
L+ + + K +V E SL L + + T + A+ A+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL------------LGTLSRYAVQVAE 122
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMS-AVAGSFG 874
G+ Y+ IHRD+ + N+LL + KI DFGL + L + + + M F
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
+ APE T + D + FGV L E+ T + + + S E P +
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 935 LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
+ +Y + + C + P RP+ + L
Sbjct: 240 CPQD------------IYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 3e-51
Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 27/293 (9%)
Query: 697 NLIGSGGSGQVYR-----IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH- 750
+G G GQV ID VAVK + + ++E++IL I H
Sbjct: 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHH 76
Query: 751 ANIVKLW-CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTR 806
N+V L C +++ E+ + +L +L ++ V +++ L
Sbjct: 77 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 136
Query: 807 LQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTM 866
+ + A+G+ ++ + IHRD+ + NILL + KI DFGLA+ + K +
Sbjct: 137 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 193
Query: 867 SAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 926
+ APE + + D++SFGV+L E+ + + Y + E R
Sbjct: 194 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLK 251
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
E + A EM Y+ L C PS RP+ E+++ L
Sbjct: 252 EGTRMR-------APDYTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 176 bits (448), Expect = 2e-49
Identities = 59/303 (19%), Positives = 116/303 (38%), Gaps = 34/303 (11%)
Query: 674 WKLTSFHQLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK 733
WK + ++L +G+G G V+R+ G A K + ++
Sbjct: 9 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHES 65
Query: 734 LEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGS 793
++ EI+ + +RH +V L +N +++YE+M L +
Sbjct: 66 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----- 120
Query: 794 SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF--KAKIADF 851
+ ++ +GLC+MH + +H D+K NI+ ++ + K+ DF
Sbjct: 121 -------MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDF 170
Query: 852 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 911
GL L ++ G+ + APE A V D++S GV+ L++G G
Sbjct: 171 GLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 227
Query: 912 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 971
+ + E + + + D+ GI+E P++R ++ +
Sbjct: 228 E---NDDETLRNVKSCDWNMDDSAFSGISEDG--------KDFIRKLLLADPNTRMTIHQ 276
Query: 972 VLQ 974
L+
Sbjct: 277 ALE 279
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 5e-49
Identities = 61/278 (21%), Positives = 102/278 (36%), Gaps = 34/278 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G SG VY G+ VA++++ Q ++ I EI ++ ++ NIV
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ +V EY+ SL + + Q
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQA 128
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L ++H + Q+IHRD+KS NILL + K+ DFG + + S + G+ +
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWM 183
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
APE K+DI+S G++ +E++ G+ + + E + L
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ C R S KE+LQ
Sbjct: 244 AIFRD------------FLNRCLDMDVEKRGSAKELLQ 269
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (438), Expect = 5e-49
Identities = 61/286 (21%), Positives = 106/286 (37%), Gaps = 37/286 (12%)
Query: 698 LIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIV 754
IG G G V++ + VA+K + + ++F+ E + H +IV
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
KL I+ EN ++ E L +L RK SL + + A +
Sbjct: 72 KLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSL------------DLASLILYAYQLS 118
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
L Y+ + +HRD+ + N+L+ S K+ DFGL++ + + + S
Sbjct: 119 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 174
Query: 875 YFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITD 933
+ APE + D++ FGV + E++ G + G ++ + P
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP--- 231
Query: 934 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
P + Y L C + PS RP E+ L
Sbjct: 232 --------PNCPPTL---YSLMTKCWAYDPSRRPRFTELKAQLSTI 266
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 172 bits (437), Expect = 8e-49
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 33/287 (11%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
++G GG +V+ VAVK + + + F E + + H IV ++
Sbjct: 14 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73
Query: 758 CCISSENSKL----LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
+E +V EY++ +L +H + +++ A
Sbjct: 74 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------MTPKRAIEVIADA 120
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHT-MSAVAGS 872
Q L + H IIHRDVK +NI++ + K+ DFG+A+ +A G T +AV G+
Sbjct: 121 CQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
Y +PE A V+ + D+YS G VL E++TG+ GD S A++H E+
Sbjct: 178 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD---SPVSVAYQHVREDPIPP 234
Query: 933 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRR 978
A +G++ + L + P +R + E+ L R
Sbjct: 235 SARHEGLSADL--------DAVVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (435), Expect = 2e-48
Identities = 44/278 (15%), Positives = 91/278 (32%), Gaps = 31/278 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
++G G V A+K + + + E +++ + H VKL
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + Y +N L +++ A+
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----------------FDETCTRFYTAEI 117
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ + + IIHRD+K NILL+ + +I DFG AK+L+ + + ++ G+ Y
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 177
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+PE + D+++ G ++ +LV G + + + E +
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ---KIIKLEYDFPEKFF 234
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ L + R +E+
Sbjct: 235 PKARD------------LVEKLLVLDATKRLGCEEMEG 260
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 161 bits (408), Expect = 6e-45
Identities = 59/291 (20%), Positives = 104/291 (35%), Gaps = 43/291 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRI------WNNRKLNQKLEKEFIAEIEILGTIR- 749
++G G S V R + AVK I + + Q+L + + E++IL +
Sbjct: 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 68
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
H NI++L + LV++ M+ L +L + L +I
Sbjct: 69 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-------------LSEKETRKI 115
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 869
+ +C +H I+HRD+K NILLD + K+ DFG + L + V
Sbjct: 116 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG---EKLREV 169
Query: 870 AGSFGYFAPEYAYT------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 923
G+ Y APE +++D++S GV++ L+ G + +
Sbjct: 170 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLRM 226
Query: 924 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ ++ L P R + +E L
Sbjct: 227 IMSGNYQFGSPEWDDYSDTV--------KDLVSRFLVVQPQKRYTAEEALA 269
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 162 bits (410), Expect = 9e-45
Identities = 54/278 (19%), Positives = 96/278 (34%), Gaps = 29/278 (10%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+++G+G +V + + VA+K I +K + E EI +L I+H NIV L
Sbjct: 15 DVLGTGAFSEVILAEDKRTQKLVAIKCI--AKKALEGKEGSMENEIAVLHKIKHPNIVAL 72
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
S L+ + + L + + ++
Sbjct: 73 DDIYESGGHLYLIMQLVSGGELFDRIVEKGF-------------YTERDASRLIFQVLDA 119
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ Y+H + LD + K I+DFGL+KM +S G+ GY
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYV 176
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
APE ++ +D +S GV+ L+ G Y + + A+ + E
Sbjct: 177 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYEFDSPYW 233
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
I++ P R + ++ LQ
Sbjct: 234 DDISDSA--------KDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 162 bits (411), Expect = 2e-44
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 34/279 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+GSG G V+R G K I + EI I+ + H ++ L
Sbjct: 36 ELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQLHHPKLINLH 92
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
+ +L+ E++ L + + + A +GL
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRIAAEDYK------------MSEAEVINYMRQACEGL 140
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEF--KAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
+MH I+H D+K NI+ +++ KI DFGLA L + + +
Sbjct: 141 KHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKL---NPDEIVKVTTATAEF 194
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE V D+++ GV+ L++G G++ + + +
Sbjct: 195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ---NVKRCDWEFDEDA 251
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
++ P R ++ + L+
Sbjct: 252 FSSVSPEA--------KDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 160 bits (406), Expect = 3e-44
Identities = 57/278 (20%), Positives = 105/278 (37%), Gaps = 31/278 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+G+G G+V+ I G + A+K + + K + E +L + H I+++
Sbjct: 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
W ++ +Y+E L L AA+
Sbjct: 70 WGTFQDAQQIFMIMDYIEGGELFSLLRKS----------------QRFPNPVAKFYAAEV 113
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ + + II+RD+K NILLD KI DFG AK + P + G+ Y
Sbjct: 114 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYTLCGTPDYI 168
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
APE T N+ ID +SFG+++ E++ G Y + + + E +
Sbjct: 169 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS---NTMKTYEKILNAELRFPPFFN 225
Query: 937 KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ + + L + + + L + + ++V
Sbjct: 226 EDVKD--LLSRL-----ITRDLSQRLGNLQNGTEDVKN 256
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (406), Expect = 4e-44
Identities = 51/279 (18%), Positives = 95/279 (34%), Gaps = 35/279 (12%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G G V+R + + K + K+ + EI IL RH NI+ L
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFV----KVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
S ++++E++ + ++ L+ + + L
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERINTSAFE------------LNEREIVSYVHQVCEAL 115
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDS--EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
++H I H D++ NI+ + KI +FG A+ L + + Y
Sbjct: 116 QFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF---TAPEY 169
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
+APE V+ D++S G ++ L++G + + + E E +
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE---NIMNAEYTFDEEA 226
Query: 936 DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
K I+ SR + E LQ
Sbjct: 227 FKEISIEA--------MDFVDRLLVKERKSRMTASEALQ 257
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 8e-43
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 19/229 (8%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILG-TIRHANIVK 755
++G G G+V+ + +F A+K + + L + + E +L H +
Sbjct: 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67
Query: 756 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQ 815
++C ++ + V EY+ L + + A
Sbjct: 68 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-------------FDLSRATFYAAEIIL 114
Query: 816 GLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGY 875
GL ++H I++RD+K NILLD + KIADFG+ K G+ Y
Sbjct: 115 GLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDY 169
Query: 876 FAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 924
APE K N +D +SFGV+L E++ G+ +G + L
Sbjct: 170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 218
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 2e-42
Identities = 59/294 (20%), Positives = 106/294 (36%), Gaps = 34/294 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--LNQKLEKEFIAEIEILGTIRHANIV 754
+ +G G VY+ + VA+K+I + + + + EI++L + H NI+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 755 KLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAA 814
L +++ LV+++ME L +
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV-------------LTPSHIKAYMLMTL 110
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFG 874
QGL Y+H I+HRD+K +N+LLD K+ADFGLAK +T +
Sbjct: 111 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH--QVVTRW 165
Query: 875 YFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSL-------------AEW 920
Y APE + ++ +D+++ G +L EL+ GD +W
Sbjct: 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225
Query: 921 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ + + + L P +R + + L+
Sbjct: 226 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (391), Expect = 2e-42
Identities = 74/295 (25%), Positives = 113/295 (38%), Gaps = 37/295 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G VY+ GE VA+K+I + + I EI +L + H NIVKL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
I +EN LV+E++ +Q L +++ + P QG
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDAS-----------ALTGIPLPLIKSYLFQLLQG 114
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L + H ++HRD+K N+L+++E K+ADFGLA+ +T + Y
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH--EVVTLWYR 169
Query: 877 APE-YAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDAL 935
APE + +DI+S G + E+VT + GD +R P
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR--TLGTPDEVVW 227
Query: 936 DKGIAEPCYLEEMTTVYR--------------LALI--CTSTLPSSRPSMKEVLQ 974
+ P Y R +L+ P+ R S K L
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 156 bits (394), Expect = 4e-42
Identities = 52/245 (21%), Positives = 90/245 (36%), Gaps = 24/245 (9%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAE---IEILGTIRHANI 753
+IG GG G+VY G+ A+K + R ++ E + E + ++ T I
Sbjct: 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 69
Query: 754 VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
V + + + + + M L L A
Sbjct: 70 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-------------SEADMRFYAAEI 116
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
GL +MH+ +++RD+K +NILLD +I+D GLA +K+ ++ G+
Sbjct: 117 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTH 169
Query: 874 GYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
GY APE + D +S G +L +L+ G + E +
Sbjct: 170 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 229
Query: 933 DALDK 937
D+
Sbjct: 230 DSFSP 234
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (386), Expect = 1e-41
Identities = 59/294 (20%), Positives = 108/294 (36%), Gaps = 30/294 (10%)
Query: 697 NLIGSGGSGQVYR-IDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI---LGTIRHAN 752
IG G G+V++ D+ G FVA+KR+ + + + I E+ + L T H N
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPN 71
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+V+L+ + + + + +D+ L V + + T +
Sbjct: 72 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK-------VPEPGVPTETIKDMMFQ 124
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+GL ++H ++HRD+K NIL+ S + K+ADFGLA++ + Q ++ +
Sbjct: 125 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV---VVT 178
Query: 873 FGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 932
Y APE + +D++S G + E+ K G
Sbjct: 179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 238
Query: 933 DALDKGIAEPCYLEEMTTVYRLALICTSTL------------PSSRPSMKEVLQ 974
D + + + + L P+ R S L
Sbjct: 239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 151 bits (382), Expect = 3e-41
Identities = 39/299 (13%), Positives = 81/299 (27%), Gaps = 39/299 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IG G G ++ + VA+K + E + +
Sbjct: 12 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNV 66
Query: 758 CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGL 817
E ++ + SL+ L R T A +
Sbjct: 67 YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKF------------SVKTVAMAAKQMLARV 114
Query: 818 CYMHHDCTPQIIHRDVKSSNILLDSEFK-----AKIADFGLAKMLAKQGE-----PHTMS 867
+H +++RD+K N L+ + DFG+ K
Sbjct: 115 QSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171
Query: 868 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR-HYA 926
++G+ Y + + + + D+ + G V + + G G + + + R
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 231
Query: 927 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENY 985
++ L G E Y+ + + P + + + N
Sbjct: 232 KQSTPLRELCAGFPEE--------FYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 282
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 5e-41
Identities = 60/298 (20%), Positives = 102/298 (34%), Gaps = 37/298 (12%)
Query: 684 FTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNR---KLNQKLEKEFIA 740
F + N+ +GSG V + G A K I R ++
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 741 EIEILGTIRHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHV 800
E+ IL I+H N++ L ++ +L+ E + L +L ++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------------- 109
Query: 801 LHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE----FKAKIADFGLAKM 856
L + G+ Y+H QI H D+K NI+L + KI DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 857 LAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 916
+ + + G+ + APE + + D++S GV+ L++G GD +
Sbjct: 167 I---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD---T 220
Query: 917 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
E A D + P R ++++ LQ
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALA--------KDFIRRLLVKDPKKRMTIQDSLQ 270
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 2e-40
Identities = 62/296 (20%), Positives = 109/296 (36%), Gaps = 33/296 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
+ IG G G V N VA+K+I + +Q + + EI+IL RH NI+ +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGI 71
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
I + + + Y+ + L+ + L +G
Sbjct: 72 NDIIRAPTIEQMKDVYLVTHLMGADLYKL----------LKTQHLSNDHICYFLYQILRG 121
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAK-QGEPHTMSAVAGSFGY 875
L Y+H ++HRD+K SN+LL++ KI DFGLA++ ++ + Y
Sbjct: 122 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178
Query: 876 FAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDA 934
APE +K + IDI+S G +L E+++ + G +
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238
Query: 935 LDKGIAEPCYLEEMTTVYR--------------LALI--CTSTLPSSRPSMKEVLQ 974
+ YL + + L L+ + P R +++ L
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 148 bits (374), Expect = 4e-40
Identities = 56/298 (18%), Positives = 95/298 (31%), Gaps = 39/298 (13%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
IGSG G +Y AGE VA+K + + E +I ++ +
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 758 -CCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
C + + ++V E + D + ++ T L +A
Sbjct: 69 RWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-------------FSLKTVLLLADQMISR 115
Query: 817 LCYMHHDCTPQIIHRDVKSSNIL---LDSEFKAKIADFGLAKML-----AKQGEPHTMSA 868
+ Y+H IHRDVK N L I DFGLAK +
Sbjct: 116 IEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 928
+ G+ Y + + + + D+ S G VL+ G G + + + R ++
Sbjct: 173 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232
Query: 929 KPI-TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENY 985
+ L KG C S +P + Q+ R + +
Sbjct: 233 MSTPIEVLCKGYPSE--------FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 282
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 6e-40
Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 18/223 (8%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
L+G G G+V + G + A+K + + + + E +L RH + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ + V EY L L T + A+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE----------------RVFTEERARFYGAEI 114
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
+ + + + +++RD+K N++LD + KI DFGL K G TM G+ Y
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYL 172
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 919
APE +D + GVV+ E++ G+ Y +H L E
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 146 bits (370), Expect = 8e-40
Identities = 66/294 (22%), Positives = 107/294 (36%), Gaps = 37/294 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G VY+ N GE A+K+I K ++ + I EI IL ++H+NIVKL
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ I ++ +LV+E+++ L Q
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESV---TAKSFLLQL 109
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L + + +++HRD+K N+L++ E + KIADFGLA+ + +
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEIVTLWYRA 168
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD 936
+ K + IDI+S G + E+V G G +R P +
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR--ILGTPNSKNWP 226
Query: 937 KGIAEPCYLEEMTTVYRLALI----------------CTSTLPSSRPSMKEVLQ 974
P Y T L P+ R + K+ L+
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 7e-39
Identities = 55/293 (18%), Positives = 100/293 (34%), Gaps = 33/293 (11%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G V++ E VA+KR+ ++ + + EI +L ++H NIV+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 757 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQG 816
+ S+ LV+E+ + + + Q
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNG----------------DLDPEIVKSFLFQL 110
Query: 817 LCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYF 876
L + + ++HRD+K N+L++ + K+A+FGLA+ ++ V +
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE-VVTLWYRP 169
Query: 877 APEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS-----LAEWAWRHYAEEKPI 931
+ ID++S G + EL + + E+ P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 932 TDALDKGIAEPCYLEEMTTVYRLALI----------CTSTLPSSRPSMKEVLQ 974
L P Y + V + + P R S +E LQ
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 1e-38
Identities = 60/306 (19%), Positives = 110/306 (35%), Gaps = 45/306 (14%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKL 756
IG G G+V++ G+ VA+K++ + + EI+IL ++H N+V L
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNL 74
Query: 757 WCCISS--------ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQ 808
+ + S LV+++ E+ + + T +
Sbjct: 75 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----------------FTLSE 118
Query: 809 IAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML--AKQGEPHTM 866
I L +++ +I+HRD+K++N+L+ + K+ADFGLA+ AK +P+
Sbjct: 119 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 178
Query: 867 SAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 925
+ + Y PE + ID++ G ++ E+ T G+ +
Sbjct: 179 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238
Query: 926 AEEKPITDALDKGIAEPCYLEEMTTVYR---------------LALI--CTSTLPSSRPS 968
P LE + R L LI P+ R
Sbjct: 239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID 298
Query: 969 MKEVLQ 974
+ L
Sbjct: 299 SDDALN 304
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 1e-37
Identities = 71/305 (23%), Positives = 110/305 (36%), Gaps = 45/305 (14%)
Query: 692 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA 751
S T++ +IG+G G VY+ + +GE VA+K++ +++ + E++I+ + H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 73
Query: 752 NIVKLWCCISSENSK------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 805
NIV+L S K LV +Y+ H + + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----------KQTLPVIY 123
Query: 806 RLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPH 864
+ L Y+H I HRD+K N+LLD + K+ DFG AK L +
Sbjct: 124 VKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 865 TMSAVAGSFGYFAP-EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH--------- 914
+ S Y AP T ID++S G VL EL+ G+ GD
Sbjct: 181 SY---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 915 ---TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI--CTSTLPSSRPSM 969
T E K T +AL P++R +
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297
Query: 970 KEVLQ 974
E
Sbjct: 298 LEACA 302
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (353), Expect = 1e-37
Identities = 55/284 (19%), Positives = 103/284 (36%), Gaps = 47/284 (16%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIR--HAN 752
L+GSGG G VY VA+K + +R + E+ +L + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 753 IVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+++L +S +L+ E E + + L
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA------------LQEELARSFFWQ 118
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLD-SEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+ + + H+ ++HRD+K NIL+D + + K+ DFG +L + + G
Sbjct: 119 VLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 171
Query: 872 SFGYFAPEY-AYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
+ Y PE+ Y ++S G++L ++V G DE + +R
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 224
Query: 931 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ ++ C L C + PS RP+ +E+
Sbjct: 225 ------QRVSSEC--------QHLIRWCLALRPSDRPTFEEIQN 254
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 2e-36
Identities = 54/286 (18%), Positives = 101/286 (35%), Gaps = 42/286 (14%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKL 756
++G G +G+V +I E A+K + + + E+E+ + +IV++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRI 70
Query: 757 WCCI----SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIG 812
+ L+V E ++ L + R +I
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG-----------DQAFTEREASEIMKS 119
Query: 813 AAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK---AKIADFGLAKMLAKQGEPHTMSAV 869
+ + Y+H I HRDVK N+L S+ K+ DFG AK T
Sbjct: 120 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC-- 174
Query: 870 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 929
+ Y APE K ++ D++S GV++ L+ G Y + +++ +
Sbjct: 175 -YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 233
Query: 930 P-ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ ++E L T P+ R ++ E +
Sbjct: 234 YEFPNPEWSEVSEEV--------KMLIRNLLKTEPTQRMTITEFMN 271
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 136 bits (343), Expect = 2e-35
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 31/276 (11%)
Query: 699 IGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWC 758
+G+G G+V + +G A+K + + + K + + E IL + +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 759 CISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC 818
++ +V EY+ + L R P A
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGR-------------FSEPHARFYAAQIVLTFE 155
Query: 819 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAP 878
Y+H +I+RD+K N+L+D + ++ DFG AK + G+ AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWTLCGTPEALAP 207
Query: 879 EYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKG 938
E + N+ +D ++ GV++ E+ G + D+ + E + K
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKD 267
Query: 939 IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 974
+ L + T + + + ++
Sbjct: 268 LLRNL----------LQVDLTKRFGNLKNGVNDIKN 293
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 2e-33
Identities = 57/300 (19%), Positives = 106/300 (35%), Gaps = 47/300 (15%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+GSG G V G VA+K++ ++ K E+ +L +RH N++ L
Sbjct: 25 PVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHENVIGLL 83
Query: 758 CCISSENSK------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+ + + LV +M H + L +
Sbjct: 84 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---------------LGEDRIQFLVY 128
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+GL Y+H HRD+K N+ ++ + + KI DFGLA+ + M+
Sbjct: 129 QMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLARQADSE-----MTGYVV 180
Query: 872 SFGYFAPEYAY-TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 930
+ Y APE + + +DI+S G ++ E++TGK G +H + +
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 240
Query: 931 ITDALDKGIAEPCYLEEMTTVYR--------------LALI--CTSTLPSSRPSMKEVLQ 974
+ Y++ + + + + L+ R + E L
Sbjct: 241 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 4e-33
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 25/249 (10%)
Query: 697 NLIGSGGSGQVYR---IDINGAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTIRHA- 751
++G+G G+V+ I + G+ A+K + + K + E ++L IR +
Sbjct: 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89
Query: 752 NIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAI 811
+V L +E L+ +Y+ L L R+R T ++ I
Sbjct: 90 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER----------------FTEHEVQI 133
Query: 812 GAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG 871
+ + + H II+RD+K NILLDS + DFGL+K E G
Sbjct: 134 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETERAYDFCG 192
Query: 872 SFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGD-EHTSLAEWAWRHYAEE 928
+ Y AP+ + ++ +D +S GV++ EL+TG D E S AE + R E
Sbjct: 193 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 252
Query: 929 KPITDALDK 937
P +
Sbjct: 253 PPYPQEMSA 261
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 1e-30
Identities = 71/327 (21%), Positives = 113/327 (34%), Gaps = 56/327 (17%)
Query: 681 QLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIA 740
++G + +L IGSG G V VA+K++ + NQ K
Sbjct: 7 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYR 65
Query: 741 EIEILGTIRHANIVKLWCCISSENSK------LLVYEYMENQSLDRWLHGRKRSLVSGSS 794
E+ ++ + H NI+ L + + + LV E M+
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-------- 117
Query: 795 SVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 854
+ G+ ++H IIHRD+K SNI++ S+ KI DFGLA
Sbjct: 118 --------HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 166
Query: 855 KMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD-- 912
+ G M+ + Y APE E +DI+S G ++ E+V K G
Sbjct: 167 RT---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
Query: 913 ----------------EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYR--- 953
E + R+Y E +P L P L + +
Sbjct: 224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 283
Query: 954 ----LALI--CTSTLPSSRPSMKEVLQ 974
L+ P+ R S+ + LQ
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQ 310
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 3e-30
Identities = 58/320 (18%), Positives = 113/320 (35%), Gaps = 45/320 (14%)
Query: 678 SFH--QLGFTESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE 735
+F+ +L T + + +GSG G V G VAVK++ + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHA 61
Query: 736 KEFIAEIEILGTIRHANIVKLWCCISS-----ENSKLLVYEYMENQSLDRWLHGRKRSLV 790
K E+ +L ++H N++ L + E + + + ++ L+ + +K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---- 117
Query: 791 SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 850
L + +GL Y+H HRD+K SN+ ++ + + KI D
Sbjct: 118 ----------LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILD 164
Query: 851 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY 910
FGLA+ + VA + N+ +DI+S G ++ EL+TG+
Sbjct: 165 FGLARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 911 GDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALI------------- 957
G +H + R + Y++ +T + ++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDL 280
Query: 958 ---CTSTLPSSRPSMKEVLQ 974
R + + L
Sbjct: 281 LEKMLVLDSDKRITAAQALA 300
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 116 bits (291), Expect = 6e-29
Identities = 58/290 (20%), Positives = 100/290 (34%), Gaps = 35/290 (12%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVK 755
+G G +V+ E V VK L +K+ EI+IL +R NI+
Sbjct: 41 RKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILENLRGGPNIIT 94
Query: 756 LWCCISSENSKL--LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGA 813
L + S+ LV+E++ N + L
Sbjct: 95 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT----------------LTDYDIRFYMYEI 138
Query: 814 AQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKIADFGLAKMLAKQGEPHTMSAVAGS 872
+ L Y H I+HRDVK N+++D E K ++ D+GLA+ + S
Sbjct: 139 LKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY---HPGQEYNVRVAS 192
Query: 873 FGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 931
+ PE + + +D++S G +L ++ KE + + +
Sbjct: 193 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 252
Query: 932 TDALDKGIAE--PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 979
D +DK E P + + + R + E L L +
Sbjct: 253 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKL 302
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 112 bits (280), Expect = 1e-27
Identities = 86/331 (25%), Positives = 134/331 (40%), Gaps = 30/331 (9%)
Query: 33 NTEERTILLNLKQQLGNPPSLQSWTSTSSPCD--WPEITCTFNSVTGISLRHKDITQKIP 90
N +++ LL +K+ LGNP +L SW T+ C+ W + C ++ T
Sbjct: 4 NPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTY------------- 50
Query: 91 PIICDLKNLTTIDLSSNSIPGEF--PEFLYNCTKLQNLDLSQNY-FVGPIPSDIDRISGL 147
+ +DLS ++P + P L N L L + VGPIP I +++ L
Sbjct: 51 -------RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 148 QCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFK 207
+ + N SG IP + ++ L TL N +GT P I L NL + N
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLN 267
IP +G KL T N + +L + L+ N LEG
Sbjct: 164 A--IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDK 221
Query: 268 NLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327
N ++ L N L+ ++ + L +DL N + G++P+ +LK L L + N+L
Sbjct: 222 NTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 328 GEVPASIGKIPALKKFKVFNNSL--SGVLPP 356
GE+P G + NN LP
Sbjct: 282 GEIP-QGGNLQRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 86.3 bits (212), Expect = 9e-19
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 5/265 (1%)
Query: 285 SSVEALKLTDIDLSMNNLTG--SIPEEFGKLKNLQLLGLFSNH-LSGEVPASIGKIPALK 341
+ + ++ ++DLS NL IP L L L + + L G +P +I K+ L
Sbjct: 45 TDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLH 104
Query: 342 KFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGA 401
+ + ++SG +P + L + S N SG LP ++ + L G+ N +SGA
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164
Query: 402 VPKSLGNCRTLRT-VQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTR 460
+P S G+ L T + + NR +G++P + + + T+
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 461 LEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKL 520
VG KNL NN G +P LT L L++L + N L G++
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 521 PSQIVSWTSLNNLNLARNELSGEIP 545
P + + A N+ P
Sbjct: 285 PQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 61.3 bits (147), Expect = 2e-10
Identities = 71/286 (24%), Positives = 108/286 (37%), Gaps = 18/286 (6%)
Query: 347 NNSLSGVLPPEIGLHSALEGFEVSTNQFSG--PLPENLCAGGVLQGV-VAFENNLSGAVP 403
N + GVL + ++S P+P +L L + + NNL G +P
Sbjct: 35 NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 94
Query: 404 KSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPS--KTAWNLTRL 461
++ L + + SG +P L L +L S N +SG LP + NL +
Sbjct: 95 PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 462 EISNNRFSGQIQRGVGSWKNLI--VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK 519
NR SG I GS+ L + + N L P T + + +
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP---TFANLNLAFVDLSRNMLEG 211
Query: 520 LPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LN 578
S + +G + LDL N+ G +P + QLK L+
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271
Query: 579 TFNLSSNKLYGNIPDEFNNLAYDD--SFLNNSNLCVKNPIINLPKC 622
+ N+S N L G IP + NL D ++ NN LC +P LP C
Sbjct: 272 SLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLC-GSP---LPAC 312
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 112 bits (280), Expect = 3e-27
Identities = 53/298 (17%), Positives = 96/298 (32%), Gaps = 22/298 (7%)
Query: 698 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLW 757
+G G V+ VA+K + + ++ + EI++L + A+ K
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIV----RGDKVYTEAAEDEIKLLQRVNDADNTKED 75
Query: 758 CCISSENSKLL-VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWP--TRLQIAIGAA 814
++ KLL + + + + + P QI+
Sbjct: 76 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135
Query: 815 QGLCYMHHDCTPQIIHRDVKSSNILLDSE-FKAKIADFGLAKMLAKQGEPHTMSAVAGSF 873
GL YMH C IIH D+K N+L++ + +A + + +
Sbjct: 136 LGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 193
Query: 874 GYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE----WAWRHYAEEK 929
Y +PE DI+S ++ EL+TG DE S + A +
Sbjct: 194 EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 253
Query: 930 PITDALDKGIAEPCYLEEMTTV--------YRLALICTSTLPSSRPSMKEVLQILRRC 979
+ L G + + + L + T S+ KE+ L
Sbjct: 254 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 311
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 92.0 bits (227), Expect = 9e-21
Identities = 62/295 (21%), Positives = 106/295 (35%), Gaps = 25/295 (8%)
Query: 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTK 122
C + C+ + + + +PP + +DL +N I N
Sbjct: 10 CHLRVVQCSDLGLE-------KVPKDLPP------DTALLDLQNNKITEIKDGDFKNLKN 56
Query: 123 LQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182
L L L N P + L+ + L N ++P + + LQ L ++ NE
Sbjct: 57 LHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPK--TLQELRVHENEIT 113
Query: 183 GTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNL 242
L+ + V+ L N + F +KKL + + + I IP+
Sbjct: 114 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD-TNITTIPQ--GLP 170
Query: 243 SSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNL 302
SL L L+GN + + L LNNL +L L N +S S+ NN
Sbjct: 171 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 230
Query: 303 TGSIPEEFGKLKNLQLLGLFSNHLSG------EVPASIGKIPALKKFKVFNNSLS 351
+P K +Q++ L +N++S P K + +F+N +
Sbjct: 231 LVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.1 bits (209), Expect = 2e-18
Identities = 60/289 (20%), Positives = 102/289 (35%), Gaps = 20/289 (6%)
Query: 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153
C L+ + DL +P + P LDL N D + L + L
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILI 63
Query: 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI 213
N S P + L +L+ LYL N+ K L L V N K
Sbjct: 64 NNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVH---ENEITKVRKSVF 120
Query: 214 EFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLF 273
+ L G A + L + + ++ IP GL +LT+L
Sbjct: 121 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELH 177
Query: 274 LYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332
L N ++ +S++ L L + LS N+++ +L+ L L +N L +VP
Sbjct: 178 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 236
Query: 333 SIGKIPALKKFKVFNNSLSGV------LPPEIGLHSALEGFEVSTNQFS 375
+ ++ + NN++S + P ++ G + +N
Sbjct: 237 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 71.6 bits (174), Expect = 5e-14
Identities = 51/284 (17%), Positives = 98/284 (34%), Gaps = 11/284 (3%)
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLY 418
L ++ N+ + + L ++ N +S P + L + L
Sbjct: 28 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87
Query: 419 SNRFSGELPTGLWTTFNLSSLMLSDNTISG----ELPSKTAWNLTRLEISNNRFSGQIQR 474
N+ ELP + T L + +N I+ + L + + SG
Sbjct: 88 KNQLK-ELPEKMPKTL--QELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG 144
Query: 475 GVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLN 534
K L + ++ + IP L L L LDGNK++ + + +L L
Sbjct: 145 AFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLG 201
Query: 535 LARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDE 594
L+ N +S ++ + + L L+ N+ + L +N + ++
Sbjct: 202 LSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSND 261
Query: 595 FNNLAYDDSFLNNSNLCV-KNPIINLPKCPSRFRNSDKISSKHL 637
F Y+ + S + + NP+ PS FR ++ L
Sbjct: 262 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.8 bits (146), Expect = 2e-10
Identities = 39/248 (15%), Positives = 68/248 (27%), Gaps = 32/248 (12%)
Query: 431 WTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNN 490
S L L ++P + L++ NN+ + + KNL NN
Sbjct: 12 LRVVQCSDLGLE------KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 65
Query: 491 LFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNEL---------- 540
S P L L L L N+L + L ++
Sbjct: 66 KISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQ 125
Query: 541 -------------SGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKL 587
SG A + + + ++ + IP + L +L NK+
Sbjct: 126 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPP-SLTELHLDGNKI 183
Query: 588 YGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAILV 647
L + + L S + R ++K + + LA
Sbjct: 184 TKVDAASLKGL-NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHK 242
Query: 648 LLVTVSLS 655
+ V L
Sbjct: 243 YIQVVYLH 250
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 2/130 (1%)
Query: 528 TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNK 586
L+L N+++ +L + +L L N+ S P L KL LS N+
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 587 LYGNIPDEFNNLAYDDSFLNNSNLCVKNPIINLPKCPSRFRNSDKISSKHLALILVLAIL 646
L +P++ + N V+ + N +
Sbjct: 91 L-KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 647 VLLVTVSLSW 656
L + ++
Sbjct: 150 KKLSYIRIAD 159
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 88.9 bits (219), Expect = 3e-19
Identities = 66/387 (17%), Positives = 128/387 (33%), Gaps = 32/387 (8%)
Query: 80 LRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPS 139
L ++T + DL +TT+ I + + + L ++ S N P
Sbjct: 29 LGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNNQLTDITP- 83
Query: 140 DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLG 199
+ ++ L I + N + P + TL+
Sbjct: 84 -LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELS-- 140
Query: 200 LAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAI 259
N+ + + + + +T+ + + + + + +
Sbjct: 141 --SNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL---------DISSNKVSD 189
Query: 260 PSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLL 319
S L L NL L +N +S P + L ++ L+ N L L NL L
Sbjct: 190 ISVLAKLTNLESLIATNNQISDITPLGILT-NLDELSLNGNQLKD--IGTLASLTNLTDL 246
Query: 320 GLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLP 379
L +N +S P + + L + K+ N +S + P GL +
Sbjct: 247 DLANNQISNLAP--LSGLTKLTELKLGANQISN-ISPLAGLTALTNLELNENQLEDISPI 303
Query: 380 ENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSL 439
NL L + + NN+S P + + L+ + +N+ S + L N++ L
Sbjct: 304 SNLK---NLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWL 356
Query: 440 MLSDNTISGELPSKTAWNLTRLEISNN 466
N IS P +T+L +++
Sbjct: 357 SAGHNQISDLTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 84.3 bits (207), Expect = 8e-18
Identities = 70/382 (18%), Positives = 126/382 (32%), Gaps = 33/382 (8%)
Query: 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L + + + N+ + + ++L + L + ++ G+ LNNLTQ+ +N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNN 76
Query: 278 ILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
L+ P KL DI ++ N + P L +
Sbjct: 77 QLTDITPLK-NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 135
Query: 338 PA------LKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQG- 390
+ + S + L+ T + N + +
Sbjct: 136 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 195
Query: 391 ------VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDN 444
++A N +S P L + L N+ L + NL+ L L++N
Sbjct: 196 LTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANN 251
Query: 445 TISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS 504
IS P LT L++ N+ S + N E +++L
Sbjct: 252 QISNLAPLSGLTKLTELKLGANQISNIS----PLAGLTALTNLELNENQLEDISPISNLK 307
Query: 505 HLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQF 564
+L L L N +S P + S T L L A N++S ++ +L + L NQ
Sbjct: 308 NLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQI 363
Query: 565 SGEIPPEIGQL-KLNTFNLSSN 585
S P + L ++ L+
Sbjct: 364 SDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 79.7 bits (195), Expect = 3e-16
Identities = 70/378 (18%), Positives = 123/378 (32%), Gaps = 53/378 (14%)
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL----KLTDI 295
+ L+ L ++ + L+ +T L + S++ + LT I
Sbjct: 19 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-----SIDGVEYLNNLTQI 71
Query: 296 DLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLP 355
+ S N LT P L L + + +N ++ P +
Sbjct: 72 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI------- 122
Query: 356 PEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTV 415
+ ++ + S ++ A L + K L N TL +
Sbjct: 123 --TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL 180
Query: 416 QLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRG 475
+ SN+ S T SL+ ++N IS P NL L ++ N+
Sbjct: 181 DISSNKVSDISVLAKLTNLE--SLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GT 236
Query: 476 VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS------ 529
+ S NL +NN S P L+ L+ L L L N++S P ++ +
Sbjct: 237 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 294
Query: 530 --------------LNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575
L L L N +S P + SL + L + N+ S + L
Sbjct: 295 NQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANL 350
Query: 576 K-LNTFNLSSNKLYGNIP 592
+N + N++ P
Sbjct: 351 TNINWLSAGHNQISDLTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 63.1 bits (152), Expect = 6e-11
Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 11 IPVTLILLVLLSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQSWTSTS----SPCDWP 66
I L L L + I + T L Q+ N L T +
Sbjct: 217 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 276
Query: 67 EITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNL 126
I+ +L + + I +LKNLT + L N+I P + + TKLQ L
Sbjct: 277 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 334
Query: 127 DLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179
+ N S + ++ + + G N S P + L+ + L L
Sbjct: 335 FFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 56.5 bits (135), Expect = 7e-09
Identities = 67/369 (18%), Positives = 118/369 (31%), Gaps = 55/369 (14%)
Query: 291 KLTDIDLSMNNLTGSIP-EEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNS 349
+ L N+T ++ + ++ LQ L + G + + L + NN
Sbjct: 23 EKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQ 77
Query: 350 LSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPK----- 404
L+ + P + + L ++ NQ + P + + +
Sbjct: 78 LTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 135
Query: 405 -------SLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWN 457
++ + L + G T L NL++L D + +
Sbjct: 136 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 195
Query: 458 LT---RLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGN 514
LT L +NN+ S G NL + N L SL++L L L N
Sbjct: 196 LTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANN 251
Query: 515 KLSGKLPSQIVSWTSLNNLNLARNELSGEIP--------------------KAIGSLLVM 554
++S P + T L L L N++S P I +L +
Sbjct: 252 QISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL 309
Query: 555 VSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNNLAYDDSF-LNNSNLCV 612
L L N S P + L KL ++NK+ NL + ++ +
Sbjct: 310 TYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISD 365
Query: 613 KNPIINLPK 621
P+ NL +
Sbjct: 366 LTPLANLTR 374
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (212), Expect = 6e-19
Identities = 60/293 (20%), Positives = 88/293 (30%), Gaps = 36/293 (12%)
Query: 62 PCDWPEI-TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNC 120
PC P C S + + +P I I L N I C
Sbjct: 1 PC--PGACVCYNEPKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRAC 55
Query: 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDI-PRSIGRLSELQTLYLYMN 179
L L L N + ++ L+ +DL N + P + L L TL+L
Sbjct: 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115
Query: 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
P L+ L+ L L N+ + F L L L++ + A
Sbjct: 116 GLQELGPGLFRGLAALQYLYLQDNALQA--LPDDTFRDLGNLTHLFLHGNRISSVPERAF 173
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLN------------------------NLTQLFLY 275
L SL+ L L+ N + P L L L L
Sbjct: 174 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLN 233
Query: 276 DNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
DN + + L S + + S+P+ L L L +N L G
Sbjct: 234 DNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQR---LAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 4e-11
Identities = 52/327 (15%), Positives = 91/327 (27%), Gaps = 55/327 (16%)
Query: 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204
+P I + Q ++L+ N + NL +L +++
Sbjct: 11 EPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILW-LHSN 66
Query: 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF 264
G+ + A L P L L L L+ L+ P
Sbjct: 67 VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFR 126
Query: 265 LLNNLTQLFLYDNILSGEIPSSV-EALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFS 323
L L L+L DN L + + LT + L N ++ F L +L L L
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 324 NHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLC 383
N ++ P + + L +F N+LS + +
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA------------------------ 222
Query: 384 AGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSD 443
R L+ ++L N + + L S
Sbjct: 223 ------------------------PLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSS 257
Query: 444 NTISGELPSKTAWNLTRLEISNNRFSG 470
+ + LP + A ++ N G
Sbjct: 258 SEVPCSLPQRLA-GRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (150), Expect = 4e-11
Identities = 48/256 (18%), Positives = 80/256 (31%), Gaps = 5/256 (1%)
Query: 359 GLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLY 418
G+ +A + + N+ S + A L + N L+ + L + L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 419 SNRFSGEL-PTGLWTTFNLSSLMLSDNTISGELPSKTA--WNLTRLEISNNRFSGQIQRG 475
N + P L +L L + P L L + +N
Sbjct: 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148
Query: 476 VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 535
NL N S L L+ LLL N+++ P L L L
Sbjct: 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208
Query: 536 ARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEF 595
N LS +A+ L + L L+ N + + L F SS+++ ++P
Sbjct: 209 FANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268
Query: 596 NNLAYDDSFLNNSNLC 611
L ++L
Sbjct: 269 AGRDLKR--LAANDLQ 282
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 81.4 bits (200), Expect = 4e-18
Identities = 31/213 (14%), Positives = 60/213 (28%), Gaps = 35/213 (16%)
Query: 697 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKL-------EKEFIAEIEILGTIR 749
L+G G V+ + VK +K+ + F
Sbjct: 6 KLMGEGKESAVFNC-YSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 750 HANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQI 809
+ KL + Y + N L + + + + ++
Sbjct: 65 FRALQKLQGLAVPKV-----YAWEGNAVLMELIDAK-----------ELYRVRVENPDEV 108
Query: 810 AIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLA-KQGEPHTMSA 868
+ + +H I+H D+ N+L+ E I DF + + +
Sbjct: 109 LDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILERD 164
Query: 869 VAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLE 901
V YF+ Y + DI S +L+
Sbjct: 165 VRNIITYFSRTYRT------EKDINSAIDRILQ 191
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.6 bits (179), Expect = 1e-14
Identities = 45/270 (16%), Positives = 95/270 (35%), Gaps = 15/270 (5%)
Query: 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSG 159
T+DL+ ++ + L + + +++ P+ +Q +DL +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEV 60
Query: 160 D-IPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218
+ + + S+LQ L L + + SNL L L+ S F +
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 219 KKLKTL------WMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQL 272
+L L TE ++ + ++ L + N + + + + NL L
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 273 FLYDNILSGEIPSSVEALK--LTDIDLS-MNNLTGSIPEEFGKLKNLQLLGLFSNHLSGE 329
L D+++ L + LS ++ E G++ L+ L +F G
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240
Query: 330 VPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
+ +P L ++ + + + P IG
Sbjct: 241 LQLLKEALPHL---QINCSHFTTIARPTIG 267
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (136), Expect = 3e-09
Identities = 42/258 (16%), Positives = 83/258 (32%), Gaps = 12/258 (4%)
Query: 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGE-FPEFLYNCTKLQNLDLSQN 131
V + Q + + + +DLS++ I L C+KLQNL L
Sbjct: 23 QGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81
Query: 132 YFVGPIPSDIDRISGLQCIDLG--GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFP--- 186
PI + + + S L ++L + + S L L L
Sbjct: 82 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 141
Query: 187 --KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSS 244
+ + L + K + + + L + + L+
Sbjct: 142 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 201
Query: 245 LEILALNG-NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLT 303
L+ L+L+ + L + L L ++ + G + EAL + ++ ++ T
Sbjct: 202 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP--HLQINCSHFT 259
Query: 304 GSIPEEFGKLKNLQLLGL 321
G KN ++ G+
Sbjct: 260 TIARPTIGNKKNQEIWGI 277
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 7e-09
Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 17/263 (6%)
Query: 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTG-SI 306
L L G +L + L L + + + + ++ +DLS + + ++
Sbjct: 5 LDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 63
Query: 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEG 366
+ LQ L L LS + ++ K L + + S + L S
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 367 FEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQ---------L 417
E++ + +++ + NLSG + + +
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 418 YSNRFSGELPTGLWTTFNLSSLMLSD-NTISGELPSKTAW--NLTRLEISNNRFSGQIQR 474
S + + L L LS I E + L L++ G +Q
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQL 243
Query: 475 GVGSWKNLIVFKASNNLFSGEIP 497
+ +L + + + F+
Sbjct: 244 LKEALPHL---QINCSHFTTIAR 263
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 0.001
Identities = 40/253 (15%), Positives = 80/253 (31%), Gaps = 16/253 (6%)
Query: 347 NNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENNLSGAVPKSL 406
+L + + L + F + PL E+ V ++ + L
Sbjct: 9 GKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL 67
Query: 407 GNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNT-ISGELPSKTAWNLTRLEISN 465
C L+ + L R S + L NL L LS + S + +RL+ N
Sbjct: 68 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELN 127
Query: 466 NRFSGQIQRGVGSWKNLIVFKAS----------NNLFSGEIPVELTSLSHLNTLLLDGNK 515
+ V + N S + + ++ L D
Sbjct: 128 LSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 187
Query: 516 LSGKLPSQIVSWTSLNNLNLAR-NELSGEIPKAIGSLLVMVSLDLSGNQFSG---EIPPE 571
L + L +L+L+R ++ E +G + + +L + G G +
Sbjct: 188 LKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA 247
Query: 572 IGQLKLNTFNLSS 584
+ L++N + ++
Sbjct: 248 LPHLQINCSHFTT 260
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.004
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 430 LWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASN 489
LW T +L+ L + G L S+ + + + S + SN
Sbjct: 1 LWQTLDLTGKNLHPDVT-GRLLSQ---GVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSN 55
Query: 490 NLFSGE-IPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLN 534
++ + L+ S L L L+G +LS + + + ++L LN
Sbjct: 56 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 101
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (151), Expect = 3e-11
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 12/211 (5%)
Query: 70 CTFNSVTG---ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNL 126
C + V ++ +++T +PP + K+ T + LS N + L T+L L
Sbjct: 4 CEVSKVASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 127 DLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFP 186
+L + + G + + +++ L+ L + +
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL 120
Query: 187 KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246
+ +G+L L N + P KL+ L + NL ++ L +L+
Sbjct: 121 RGLGELQELY-----LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175
Query: 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L L N L IP G F + L FL+ N
Sbjct: 176 TLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 6e-09
Identities = 44/207 (21%), Positives = 72/207 (34%), Gaps = 10/207 (4%)
Query: 119 NCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178
++ + +P D+ + + L N ++ + L L L
Sbjct: 8 KVASHLEVNCDKRNLTA-LPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 179 NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA 238
E L VLG S+ + +P+ L L L ++ L A
Sbjct: 65 AELTKLQVDG-----TLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 239 MSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK-LTDIDL 297
+ L L+ L L GN L+ P L L +L L +N L+ + L+ L + L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 298 SMNNLTGSIPEEFGKLKNLQLLGLFSN 324
N+L +IP+ F L L N
Sbjct: 180 QENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (113), Expect = 2e-06
Identities = 43/193 (22%), Positives = 65/193 (33%), Gaps = 6/193 (3%)
Query: 396 NNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 455
NL+ A+P L + + L N L L+ L L ++ T
Sbjct: 20 RNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTL 76
Query: 456 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNK 515
L L++S+N+ G ++ + N L + L L L L L GN+
Sbjct: 77 PVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGELQELYLKGNE 135
Query: 516 LSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 575
L P + L L+LA N L+ + L + +L L N IP
Sbjct: 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGS 194
Query: 576 K-LNTFNLSSNKL 587
L L N
Sbjct: 195 HLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (107), Expect = 1e-05
Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 23/184 (12%)
Query: 282 EIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGL-------------------- 321
+P + T + LS N L L L L
Sbjct: 24 ALPPDLPKD-TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTL 82
Query: 322 -FSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPE 380
S++ +P +PAL V N L+ + + L+ + N+ P
Sbjct: 83 DLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG 142
Query: 381 NLCAGGVLQGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLM 440
L L+ + NNL+ L L T+ L N +P G + + L
Sbjct: 143 LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAF 201
Query: 441 LSDN 444
L N
Sbjct: 202 LHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.0 bits (97), Expect = 2e-04
Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 10/186 (5%)
Query: 6 SVFPKIPVTLILLVL-----LSIPFEVIPQSPNTEERTILLNLKQQLGNPPSLQS----W 56
++ P +P +L L + + + + +L +L
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLD 83
Query: 57 TSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEF 116
S + P + T ++T + + +T + L L + L N + P
Sbjct: 84 LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143
Query: 117 LYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYL 176
L KL+ L L+ N ++ + L + L N+ IP+ L +L
Sbjct: 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFL 202
Query: 177 YMNEFN 182
+ N +
Sbjct: 203 HGNPWL 208
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (123), Expect = 2e-07
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 504 SHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARNELSGEIPKAIGSLL-----VM 554
S L L L +S L + +++ SL L+L+ N L + + ++
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 555 VSLDLSGNQFSGEIPPEIGQLKLNTFNLS 583
L L +S E+ + L+ + +L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.6 bits (116), Expect = 2e-06
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 9/126 (7%)
Query: 54 QSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGE- 112
+ S S ++ L + + + L + L+ +
Sbjct: 326 AACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 385
Query: 113 ---FPEFLYNCTKLQNLDLSQNYFVGPIPSDI-----DRISGLQCIDLGGNNFSGDIPRS 164
L L+ LDLS N + L+ + L +S ++
Sbjct: 386 CSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR 445
Query: 165 IGRLSE 170
+ L +
Sbjct: 446 LQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 2e-06
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 10/95 (10%)
Query: 98 NLTTIDLSSNSI-PGEFPEFLYNCTKLQNLDLSQNYF----VGPIPSDIDRISGLQCIDL 152
++ ++D+ + + E L + Q + L I S + L ++L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 153 GGNNFSGDIPRSIGRL-----SELQTLYLYMNEFN 182
N + + ++Q L L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLT 97
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 6e-06
Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 6/113 (5%)
Query: 506 LNTLLLDGNKLSGKLPSQIVS-WTSLNNLNLARNELSGEIPKAIGSLLV----MVSLDLS 560
+ +L + +LS ++++ + L L+ K I S L + L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 561 GNQFSGEIPPEIGQ-LKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSNLCV 612
N+ + Q L+ + + L + L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 116
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (109), Expect = 9e-06
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 10/88 (11%)
Query: 521 PSQIVSWTSLNNLNLARNELSGEIPKAIGSLLV----MVSLDLSGNQFSGEIPPEIGQL- 575
+ L L LA ++S ++ + L+ + LDLS N ++ +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 576 -----KLNTFNLSSNKLYGNIPDEFNNL 598
L L + D L
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (107), Expect = 2e-05
Identities = 12/89 (13%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 113 FPEFLYNCTKLQNLDLSQNYF----VGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGR- 167
+ L+ L L+ + + + L+ +DL N +
Sbjct: 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420
Query: 168 ----LSELQTLYLYMNEFNGTFPKEIGDL 192
L+ L LY ++ + L
Sbjct: 421 VRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 7e-05
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Query: 209 AMIPIEFGMLKKLKTLWMTEANL----IGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF 264
+ L+ LW+ + ++ + + SL L L+ N L A L
Sbjct: 359 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 418
Query: 265 -----LLNNLTQLFLYDNILSGEIPSSVEALK 291
L QL LYD S E+ ++AL+
Sbjct: 419 ESVRQPGCLLEQLVLYDIYWSEEMEDRLQALE 450
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 8e-05
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Query: 481 NLIVFKASNNLFSGEIPVEL-TSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNL 535
++ S EL L + LD L+ + S + +L LNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 536 ARNELSGEIPKAIGSLLVMVSLDL 559
NEL + L S +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKI 86
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 2e-04
Identities = 7/69 (10%), Positives = 20/69 (28%), Gaps = 5/69 (7%)
Query: 78 ISLRHKDITQKIPPIICD-LKNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDLSQNY 132
+ ++ ++++ + L+ + L + L L L+L N
Sbjct: 7 LDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE 66
Query: 133 FVGPIPSDI 141
+
Sbjct: 67 LGDVGVHCV 75
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 4e-04
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL----IGEIPEAMSNLSSLEILA 249
+++ L + A +L++ + + + + L +I A+ +L L
Sbjct: 3 DIQSLDIQCE-ELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 250 LNGNHLEGAIPSGLF--LLNNLTQL 272
L N L + L ++
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKI 86
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 0.001
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 290 LKLTDIDLSMNNLTGS-IPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI----PALKKFK 344
L + +D+ L+ + E L+ Q++ L L+ I PAL +
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 345 VFNNSLSGVLPPEIG 359
+ +N L V +
Sbjct: 62 LRSNELGDVGVHCVL 76
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 6/91 (6%)
Query: 268 NLTQLFLYDNILSGE-IPSSVEALK-LTDIDLSMNNLTG----SIPEEFGKLKNLQLLGL 321
++ L + LS + L+ + L LT I L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 322 FSNHLSGEVPASIGKIPALKKFKVFNNSLSG 352
SN L + + K+ SL
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 244 SLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSV-EALK----LTDIDL 297
++ L + L A + L LL + L D L+ + AL+ L +++L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 298 SMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328
N L + + L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 267 NNLTQLFLYDNILSGEIPSSV-EALK----LTDIDLSMNNLTGSIPEEFGK-----LKNL 316
+ L L+L D +S SS+ L L ++DLS N L + + + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 317 QLLGLFSNHLSGEVPASIGKIPALK 341
+ L L+ + S E+ + + K
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 11/113 (9%), Positives = 30/113 (26%), Gaps = 23/113 (20%)
Query: 433 TFNLSSLMLSDNTISGELPSKTA---WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASN 489
+ ++ SL + +S ++ + + + + + + S
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA---------- 50
Query: 490 NLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSG 542
L L L L N+L ++ + + + L
Sbjct: 51 ----------LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.004
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 9/82 (10%)
Query: 61 SPCDWPEITCTFNSVTGISLRHKDIT----QKIPPIICDLKNLTTIDLSSNSIPGEFPEF 116
S W E+ + L +T + I + L ++L SN +
Sbjct: 15 SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 74
Query: 117 L-----YNCTKLQNLDLSQNYF 133
+ K+Q L L
Sbjct: 75 VLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 50.6 bits (119), Expect = 6e-07
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 225 WMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIP 284
EI SLE L ++ N L +P+ L L +L N L+ E+P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLA-EVP 320
Query: 285 SSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQL 318
+ L + + N L P+ +++L++
Sbjct: 321 ELPQ--NLKQLHVEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 1e-06
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 514 NKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIG 573
N S ++ S SL LN++ N+L E+P L L S N + E+P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRL---ERLIASFNHLA-EVPELPQ 324
Query: 574 QLKLNTFNLSSNKLYGNIPDEFNNL 598
LK ++ N L PD ++
Sbjct: 325 NLK--QLHVEYNPLRE-FPDIPESV 346
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.5 bits (111), Expect = 5e-06
Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 9/119 (7%)
Query: 54 QSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEF 113
+ S + I + + + +I + +L +++S+N + E
Sbjct: 241 ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL-IEL 299
Query: 114 PEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQ 172
P +L+ L S N+ +P L+ + + N P + +L+
Sbjct: 300 PALP---PRLERLIASFNHLAE-VPEL---PQNLKQLHVEYNPLRE-FPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.7 bits (109), Expect = 8e-06
Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 9/156 (5%)
Query: 42 NLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTT 101
L + L++ + + + + + I L L
Sbjct: 205 FLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPP 264
Query: 102 IDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDI 161
N+ E L+ L++S N + +P+ R L+ + N+ + ++
Sbjct: 265 NLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPR---LERLIASFNHLA-EV 319
Query: 162 PRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEV 197
P L+ L++ N FP + +L +
Sbjct: 320 PELPQN---LKQLHVEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 4e-04
Identities = 51/325 (15%), Positives = 98/325 (30%), Gaps = 25/325 (7%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLS 129
C + L + ++ +P + +L ++ S NS+ E PE + L + +
Sbjct: 35 CLDRQAHELELNNLGLS-SLPELP---PHLESLVASCNSL-TELPELPQSLKSLLVDNNN 89
Query: 130 QNYFVGPIPS-DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKE 188
P + +S Q L S + + L+ L
Sbjct: 90 LKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGN 149
Query: 189 IGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEIL 248
E+ L + + ++ L + N I E + NL L +
Sbjct: 150 NQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTI 209
Query: 249 ---------ALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299
+ A+ L +L +L L +L +
Sbjct: 210 YADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYL 269
Query: 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPPEIG 359
N + I +L+ L + +N L E+PA + L++ N L+ +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLAE-VPELPQ 324
Query: 360 LHSALEGFEVSTNQFSG--PLPENL 382
L+ V N +PE++
Sbjct: 325 ---NLKQLHVEYNPLREFPDIPESV 346
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.4 bits (90), Expect = 0.002
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 11/95 (11%)
Query: 175 YLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE 234
Y+N + +LE L ++ N K +P + +L+ L + N + E
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNN---KLIELP---ALPPRLERLIASF-NHLAE 318
Query: 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNL 269
+PE NL L + N L P + +L
Sbjct: 319 VPELPQNLKQLH---VEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.3 bits (87), Expect = 0.004
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 416 QLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRG 475
Y N S E+ + +L L +S+N + ELP+ L RL S N + ++
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA-LPPRLERLIASFNHLA-EVPEL 322
Query: 476 VGSWKNLIVFKASNNLFSGEIPVELTSLSHLN 507
+ K L V N E P S+ L
Sbjct: 323 PQNLKQLHV---EYNPLR-EFPDIPESVEDLR 350
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 11/130 (8%)
Query: 148 QCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFK 207
+ + L + + + + +L + L L N P + L LEV ++
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEV----LQASDN 53
Query: 208 PAMIPIEFGMLKKLKTLWMTEANLIG-EIPEAMSNLSSLEILALNGNHL---EGAIPSGL 263
L +L+ L + L + + + L +L L GN L EG
Sbjct: 54 ALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 113
Query: 264 FLLNNLTQLF 273
+L +++ +
Sbjct: 114 EMLPSVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.7 bits (105), Expect = 4e-06
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 234 EIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLT 293
+ + L + L L+ N L P+ L L L ++ + + +L
Sbjct: 11 TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCL-EVLQASDNALENVDGVANLPRLQ 68
Query: 294 DIDLSMNNLTG-SIPEEFGKLKNLQLLGLFSNHLSGE 329
++ L N L + + L LL L N L E
Sbjct: 69 ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.3 bits (104), Expect = 6e-06
Identities = 24/119 (20%), Positives = 37/119 (31%), Gaps = 7/119 (5%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
+ L HKD+T + + L +T +DLS N + P L+ L S N
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPAL-AALRCLEVLQASDNALENVD 59
Query: 138 PSDIDRISGLQCIDLGGNNF-SGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNL 195
Q + L N + + L L L N L+ +
Sbjct: 60 GVANLPRL--QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.7 bits (92), Expect = 3e-04
Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 2/107 (1%)
Query: 413 RTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQI 472
R + L + L ++ L LS N + P+ A + +++ +
Sbjct: 1 RVLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 473 QRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK 519
+ + +N L L S L L L GN L +
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 46.7 bits (109), Expect = 3e-06
Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 20/194 (10%)
Query: 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLY-NCT 121
C+ + CT + +I + IP + T + L+ N + + L+
Sbjct: 8 CEGTTVDCTGRGLK-------EIPRDIPL------HTTELLLNDNELGRISSDGLFGRLP 54
Query: 122 KLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF 181
L L+L +N G P+ + S +Q + LG N + L +L+TL LY N+
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 182 NGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSN 241
+ P G +L L ++ + L+ + P S
Sbjct: 115 SCVMP---GSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP---SK 168
Query: 242 LSSLEILALNGNHL 255
+ ++I L +
Sbjct: 169 VRDVQIKDLPHSEF 182
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 44.4 bits (103), Expect = 2e-05
Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 9/181 (4%)
Query: 431 WTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQI-QRGVGSWKNLIVFKASN 489
TT + + L E+P + T L +++N G +L+ +
Sbjct: 10 GTTVDCTGRGLK------EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKR 63
Query: 490 NLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIG 549
N +G P SH+ L L NK+ + L LNL N++S +P +
Sbjct: 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123
Query: 550 SLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAYDDSFLNNSN 609
L + SL+L+ N F+ L +L+ P + ++ D L +S
Sbjct: 124 HLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKD--LPHSE 181
Query: 610 L 610
Sbjct: 182 F 182
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 7e-06
Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 18/204 (8%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
F +L+ K +T + +L ++ I +++ I + + L L+ N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
+DI ++ L+ + + + S + + + +
Sbjct: 79 KL-----TDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHL 133
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
L KL TL + + + +P ++ L+ L+ L L+
Sbjct: 134 PQLES-----LYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 186
Query: 252 GNHLEGAIPSGLFLLNNLTQLFLY 275
NH+ L L NL L L+
Sbjct: 187 KNHISD--LRALAGLKNLDVLELF 208
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (108), Expect = 7e-06
Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 42/249 (16%)
Query: 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTK 122
C C + VT +IP + +N + +
Sbjct: 8 CSNRVFLCQESKVT-----------EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGD 54
Query: 123 LQNLDLSQNYFVGPI--------------------------PSDIDRISGLQCIDLGGNN 156
L+ +++SQN + I P + LQ + +
Sbjct: 55 LEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 114
Query: 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFG 216
+ L + N T + + E + L N N + F
Sbjct: 115 IKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN 174
Query: 217 MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD 276
+ + NL + S IL ++ + GL L L Y+
Sbjct: 175 GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234
Query: 277 NILSGEIPS 285
++P+
Sbjct: 235 L---KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (105), Expect = 2e-05
Identities = 27/241 (11%), Positives = 54/241 (22%), Gaps = 13/241 (5%)
Query: 90 PPIICDLKNLTTIDLSSN---SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG 146
IC N + IP + P L
Sbjct: 2 HHRICHCSN-RVFLCQESKVTEIPSDLP------RNAIELRFVLTKLRVIQKGAFSGFGD 54
Query: 147 LQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNF 206
L+ I++ N+ I + N + + + L ++
Sbjct: 55 LEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 114
Query: 207 KPAMIPIEFGMLKKLKTLWMTE--ANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLF 264
+ + + L + + E + IL LN N ++
Sbjct: 115 IKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN 174
Query: 265 LLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFS 323
+N L +D+S + LK L+ ++
Sbjct: 175 GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234
Query: 324 N 324
Sbjct: 235 L 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (90), Expect = 0.001
Identities = 28/223 (12%), Positives = 61/223 (27%), Gaps = 8/223 (3%)
Query: 137 IPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE 196
IPSD+ R + + +L+ + + N+ ++
Sbjct: 23 IPSDLPR--NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 80
Query: 197 VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE 256
+N + P F L L+ L ++ + + +L + N
Sbjct: 81 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINI 140
Query: 257 GAIPSGLFLLNNLTQLFLY---DNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKL 313
I F+ + + L+ + I + NNL + F
Sbjct: 141 HTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGA 200
Query: 314 KNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFNNSLSGVLPP 356
+L + + + + L+ +N LP
Sbjct: 201 SGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 46.4 bits (108), Expect = 1e-05
Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 34/312 (10%)
Query: 74 SVTGISLRHKDIT----QKIPPIICDLKNLTTIDLSSNSIPGE----FPEFLYNCTKLQN 125
S+ G SL+ IT + + ++ + ++ I LS N+I E E + + L+
Sbjct: 4 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 63
Query: 126 LDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTF 185
+ S + + + L L Q + +
Sbjct: 64 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 123
Query: 186 PKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL 245
+ L A + + + + N + +
Sbjct: 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183
Query: 246 EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNIL---------------SGEIPSSVEAL 290
L+ + + + L + Y L S +
Sbjct: 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243
Query: 291 KLTDIDLSMNNLTGSIPE------EFGKLKNLQLLGLFSNHLSGEVPASI-----GKIPA 339
L ++ L+ L+ + LQ L L N + + ++ K+P
Sbjct: 244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD 303
Query: 340 LKKFKVFNNSLS 351
L ++ N S
Sbjct: 304 LLFLELNGNRFS 315
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.4 bits (95), Expect = 4e-04
Identities = 46/362 (12%), Positives = 95/362 (26%), Gaps = 48/362 (13%)
Query: 219 KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHL--EGA--IPSGLFLLNNLTQLFL 274
K LK +T + + S++ + L+GN + E A + + +L
Sbjct: 8 KSLKLDAIT-TEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 275 YDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASI 334
D + IPE L L + + A
Sbjct: 67 SDI--------------------FTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106
Query: 335 GKIPALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAF 394
+ ++ L G +++ + + L+ ++
Sbjct: 107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 166
Query: 395 ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 454
N L K + + L L +L T
Sbjct: 167 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT 226
Query: 455 AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGN 514
+L ++ S R +G L+ + + + +E L L L N
Sbjct: 227 FTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR---LQYN 283
Query: 515 KLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ 574
++ + + +L L+L+GN+FS E + +
Sbjct: 284 EIELDAVRTLKTVIDEKMPDLLF-------------------LELNGNRFSEE-DDVVDE 323
Query: 575 LK 576
++
Sbjct: 324 IR 325
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 0.002
Identities = 50/306 (16%), Positives = 86/306 (28%), Gaps = 31/306 (10%)
Query: 73 NSVTGISLRHKDIT----QKIPPIICDLKNLTTIDLSSNSIP----------GEFPEFLY 118
+SV I L I + + I K+L + S + L
Sbjct: 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALL 90
Query: 119 NCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178
C KL + LS N F + + + G L +
Sbjct: 91 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAV 150
Query: 179 NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA 238
N+ P + L + K+ + + + E
Sbjct: 151 NKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 210
Query: 239 MSNLSSLEILALNGNHLE----GAIPSGLFLLNNLTQLFLYDNILSGEIPSSV------- 287
++ L++L L N A+ L NL +L L D +LS ++V
Sbjct: 211 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 270
Query: 288 EALKLTDIDLSMNNLTGSIPEE-----FGKLKNLQLLGLFSNHLSGEVPASIGKIPALKK 342
E + L + L N + K+ +L L L N S E + +I +
Sbjct: 271 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE-DDVVDEIREVFS 329
Query: 343 FKVFNN 348
+
Sbjct: 330 TRGRGE 335
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 30/217 (13%), Positives = 56/217 (25%), Gaps = 20/217 (9%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
+ I+ ++T + DL +TT+ + E + L L+L N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKDN 73
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
P + I + T + +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 192 LS------------NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAM 239
L + L KL TL + + P +
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 240 SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD 276
++L +L + L N + P L +NL + L +
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.002
Identities = 39/226 (17%), Positives = 68/226 (30%), Gaps = 17/226 (7%)
Query: 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277
L + ++N+ + +A +L + L+ G + G+ LNNL L L DN
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDN 73
Query: 278 ILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKI 337
++ P +L+ + + L +
Sbjct: 74 QITDLAPLK---------NLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP 124
Query: 338 PALKKFKVFNNSLSGVLPPEIGLHSALEGFEVSTNQFSGPLPENLCAGGVLQGVVAFENN 397
A + L +S L L + A +N
Sbjct: 125 LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNK 184
Query: 398 LSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSD 443
+S P L + L V L +N+ S P L T NL + L++
Sbjct: 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.004
Identities = 33/229 (14%), Positives = 63/229 (27%), Gaps = 19/229 (8%)
Query: 119 NCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178
+ ++ + + G+ + G + I + L+ L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKD 72
Query: 179 NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA 238
N+ + +L+ + L L+ N + I + T
Sbjct: 73 NQIT--DLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN 130
Query: 239 MSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLS 298
+ L N + L G + L+ KLT +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYL--SIGNAQVSDLTPLANLS-------KLTTLKAD 181
Query: 299 MNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVFN 347
N ++ P L NL + L +N +S P + L + N
Sbjct: 182 DNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 42.7 bits (99), Expect = 7e-05
Identities = 25/201 (12%), Positives = 52/201 (25%), Gaps = 18/201 (8%)
Query: 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131
L ++T + DL +TT+ I + + + L ++ S N
Sbjct: 17 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNN 72
Query: 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD 191
P ++ + + +
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 192 LSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251
L I + + ++ + ++NL++LE L ++
Sbjct: 133 L------------ELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDIS 180
Query: 252 GNHLEGAIPSGLFLLNNLTQL 272
N + S L L NL L
Sbjct: 181 SNKVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 19/202 (9%)
Query: 119 NCTKLQNLDLSQNYFVGPIP-SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177
+ L + + +D+D+++ LQ LG + G + L+ L +
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFS 70
Query: 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE 237
N+ P L NL L +N + A I + + +
Sbjct: 71 NNQLTDITP-----LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK 125
Query: 238 AMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDL 297
++NL+ LE+ + + + N + + D + + L +D+
Sbjct: 126 NLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTT------LERLDI 179
Query: 298 SMNNLTGSIPEEFGKLKNLQLL 319
S N ++ KL NL+ L
Sbjct: 180 SSNKVSD--ISVLAKLTNLESL 199
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (96), Expect = 1e-04
Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 230 NLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA 289
+ ++ MS AL+ L L N L ++ + + E
Sbjct: 7 EQVEQLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAA-TLRIIEEN 63
Query: 290 LK-LTDIDLSMNNLTG--SIPEEFGKLKNLQLLGLFSNHLSGEVPASIGKIPALKKFKVF 346
+ L ++LS N L + K NL++L L N L E K L++ +
Sbjct: 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLD 123
Query: 347 NNSLSGVLPPEIGLHSAL 364
NSLS + SA+
Sbjct: 124 GNSLSDTFRDQSTYISAI 141
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 0.002
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 85 ITQKIPPIICDLKNLTTIDLSSNSI--PGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID 142
+ + I ++ L +++LS+N + + + L+ L+LS N D
Sbjct: 53 MAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKI 112
Query: 143 RISGLQCIDLGGNNFSGDIP 162
+ L+ + L GN+ S
Sbjct: 113 KGLKLEELWLDGNSLSDTFR 132
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 4e-04
Identities = 19/143 (13%), Positives = 39/143 (27%), Gaps = 6/143 (4%)
Query: 84 DITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR 143
++ ++ + +DL IP + +D S N
Sbjct: 6 ELIEQAAQYT-NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGFPL 61
Query: 144 ISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIGDLSNLEVLGLAY 202
+ L+ + + N L +L L L N + L +L L +
Sbjct: 62 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 121
Query: 203 -NSNFKPAMIPIEFGMLKKLKTL 224
K + +++ L
Sbjct: 122 NPVTNKKHYRLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 5e-04
Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 7/125 (5%)
Query: 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI 137
+ LR I I + L ID S N I + +L+ L ++ N
Sbjct: 23 LDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--KLDGFPLLRRLKTLLVNNNRICRIG 79
Query: 138 PSDIDRISGLQCIDLGGNNFSG-DIPRSIGRLSELQTLYLY---MNEFNGTFPKEIGDLS 193
+ L + L N+ + L L L + + I +
Sbjct: 80 EGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVP 139
Query: 194 NLEVL 198
+ VL
Sbjct: 140 QVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 0.001
Identities = 25/147 (17%), Positives = 41/147 (27%), Gaps = 7/147 (4%)
Query: 104 LSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPR 163
L++ I + ++ N + + LDL I + + ID N
Sbjct: 3 LTAELI-EQAAQYT-NAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGF 59
Query: 164 SIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN--SNFKPAMIPIEFGMLKKL 221
L L+TL + N L +L L L N L L
Sbjct: 60 P--LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 222 KTLWMTEANLIGEIPEAMSNLSSLEIL 248
L N + + + +L
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVL 144
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 3/114 (2%)
Query: 70 CTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLY-NCTKLQNLDL 128
C + +G+ + +NLT + + + +L+NL +
Sbjct: 5 CCPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTI 63
Query: 129 SQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182
++ P L ++L N + + LQ L L N +
Sbjct: 64 VKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1024 | |||
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1ejda_ | 419 | UDP-N-acetylglucosamine enolpyruvyl transferase (E | 100.0 | |
| d2df7a1 | 419 | Birnavirus VP2 {Infectious bursal disease virus [T | 100.0 | |
| d1om4a_ | 418 | Nitric oxide (NO) synthase oxygenase domain {Rat ( | 100.0 | |
| d2gp4a2 | 418 | 6-phosphogluconate dehydratase EDD {Shewanella one | 100.0 | |
| d1f61a_ | 418 | Isocitrate lyase {Mycobacterium tuberculosis [TaxI | 100.0 | |
| d2r5ea1 | 418 | Kynurenine--oxoglutarate transaminase I {Yellowfev | 100.0 | |
| d1w7la_ | 418 | Kynurenine--oxoglutarate transaminase I {Human (Ho | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1w6ga1 | 417 | Copper amine oxidase, domain 3 {Arthrobacter globi | 100.0 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 100.0 | |
| d3bona1 | 417 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d1ltka_ | 417 | Phosphoglycerate kinase {Malaria parasite (Plasmod | 100.0 | |
| d1gff1_ | 417 | Microvirus capsid proteins {Bacteriophage G4 [TaxI | 100.0 | |
| d2csga1 | 417 | Hypothetical protein YbiU {Salmonella typhimurium | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1q2oa_ | 416 | Nitric oxide (NO) synthase oxygenase domain {Cow ( | 100.0 | |
| d1dfoa_ | 416 | Serine hydroxymethyltransferase {Escherichia coli | 100.0 | |
| d1d8wa_ | 416 | L-rhamnose isomerase {Escherichia coli [TaxId: 562 | 100.0 | |
| d2vnud4 | 416 | Exosome complex exonuclease RRP44 {Saccharomyces c | 100.0 | |
| d1igwa_ | 416 | Isocitrate lyase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1pb1a_ | 416 | Isocitrate dehydrogenase, ICDH {Escherichia coli [ | 100.0 | |
| d1dnva_ | 415 | Densovirus capsid protein {Galleria mellonella den | 100.0 | |
| d1so2a_ | 415 | cGMP-inhibited 3',5'-cyclic phosphodiesterase B, p | 100.0 | |
| d16pka_ | 415 | Phosphoglycerate kinase {Trypanosoma brucei [TaxId | 100.0 | |
| d2ieaa2 | 415 | Pyruvate dehydrogenase E1 component, PP module {Es | 100.0 | |
| d1qpga_ | 415 | Phosphoglycerate kinase {Baker's yeast (Saccharomy | 100.0 | |
| d2qeec1 | 415 | Uncharacterized protein BH0493 {Bacillus haloduran | 100.0 | |
| d1s5ja2 | 415 | Family B DNA polymerase {Sulfolobus solfataricus [ | 100.0 | |
| d1kbia1 | 414 | Flavocytochrome b2, C-terminal domain {Baker's yea | 100.0 | |
| d2b8na1 | 414 | Putative glycerate kinase (hypothetical protein TM | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1t0la_ | 414 | NADP-dependent isocitrate dehydrogenase {Human (Ho | 100.0 | |
| d1t5la1 | 413 | Nucleotide excision repair enzyme UvrB {Bacillus c | 100.0 | |
| d1vh4a_ | 413 | Stabilizer of iron transporter SufD {Escherichia c | 100.0 | |
| d1hdia_ | 413 | Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: | 100.0 | |
| d2qgma1 | 413 | Succinoglycan biosynthesis protein BC3205 {Bacillu | 100.0 | |
| d1lwda_ | 413 | NADP-dependent isocitrate dehydrogenase {Pig (Sus | 100.0 | |
| d1zjca1 | 413 | Aminopeptidase S, AMPS {Staphylococcus aureus [Tax | 100.0 | |
| d1ulva1 | 413 | Glucodextranase, domain A {Arthrobacter globiformi | 100.0 | |
| d1a0tp_ | 413 | Sucrose-specific porin {Enterobacterium (Salmonell | 100.0 | |
| d1ocka_ | 412 | Malonamidase E2 {Bradyrhizobium japonicum [TaxId: | 100.0 | |
| d1yzya1 | 412 | Hypothetical protein HI1011 {Haemophilus influenza | 100.0 | |
| d1yaaa_ | 412 | Aspartate aminotransferase, AAT {Baker's yeast (Sa | 100.0 | |
| d1rxxa_ | 412 | Arginine deiminase {Pseudomonas aeruginosa [TaxId: | 100.0 | |
| d1ajsa_ | 412 | Aspartate aminotransferase, AAT {Pig (Sus scrofa), | 100.0 | |
| d1bw0a_ | 412 | Tyrosine aminotransferase (TAT) {Trypanosoma cruzi | 100.0 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 100.0 | |
| d1t3ca_ | 411 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1izoa_ | 411 | Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1p1ja1 | 410 | Myo-inositol 1-phosphate synthase {Baker's yeast ( | 100.0 | |
| d1kfsa2 | 410 | DNA polymerase I (Klenow fragment) {Escherichia co | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d1s5ja1 | 410 | Exonuclease domain of family B DNA polymerases {Su | 100.0 | |
| d2cmza1 | 409 | Spike glycoprotein {Vesicular stomatitis indiana v | 100.0 | |
| d1tv5a1 | 409 | Dihydroorotate dehydrogenase {Plasmodium falciparu | 100.0 | |
| d1qtma2 | 409 | DNA polymerase I (Klenow fragment) {Thermus aquati | 100.0 | |
| d2g0da1 | 409 | Nisin biosynthesis protein NisC {Lactococcus lacti | 100.0 | |
| d1b25a1 | 409 | Formaldehyde ferredoxin oxidoreductase {Archaeon P | 100.0 | |
| d1s9ra_ | 409 | Arginine deiminase {Mycoplasma arginini [TaxId: 20 | 100.0 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 100.0 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1r76a_ | 408 | Polygalacturonic acid lyase (pectate lyase) {Azosp | 100.0 | |
| d1c4oa1 | 408 | Nucleotide excision repair enzyme UvrB {Thermus th | 100.0 | |
| d1f1oa_ | 408 | Adenylosuccinate lyase {Bacillus subtilis [TaxId: | 100.0 | |
| d2hhva2 | 408 | DNA polymerase I (Klenow fragment) {Bacillus stear | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1t3ia_ | 408 | Probable cysteine desulfurase SufS {Synechocystis | 100.0 | |
| d1qs0a_ | 407 | 2-oxoisovalerate dehydrogenase (E1B), PP module {P | 100.0 | |
| d1eu8a_ | 407 | D-maltodextrin-binding protein, MBP {Archaeon Ther | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 100.0 | |
| d1ei6a_ | 406 | Phosphonoacetate hydrolase {Pseudomonas fluorescen | 100.0 | |
| d2ayia1 | 406 | Aminopeptidase T {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d1kl1a_ | 405 | Serine hydroxymethyltransferase {Bacillus stearoth | 100.0 | |
| d2nwwa1 | 405 | Proton glutamate symport protein {Pyrococcus horik | 100.0 | |
| d1h6za3 | 405 | Pyruvate phosphate dikinase, N-terminal domain {Tr | 100.0 | |
| d1jf9a_ | 405 | NifS-like protein/selenocysteine lyase {Escherichi | 100.0 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 100.0 | |
| d1z7da1 | 404 | Ornithine aminotransferase {Plasmodium yoelii yoel | 100.0 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 100.0 | |
| d1qz9a_ | 404 | Kynureninase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 100.0 | |
| d1re9a_ | 404 | Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 | 100.0 | |
| d2byla1 | 404 | Ornithine aminotransferase {Human (Homo sapiens) [ | 100.0 | |
| d1h12a_ | 404 | Endo-1,4-beta-xylanase {Pseudoalteromonas haloplan | 100.0 | |
| d1xksa_ | 403 | Nuclear pore complex protein Nup133 {Human (Homo s | 100.0 | |
| d1wsta1 | 403 | Multiple substrate aminotransferase, MSAT {Thermoc | 100.0 | |
| d1ueda_ | 403 | p450 monoxygenase OxyC {Amycolatopsis orientalis [ | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d1gwia_ | 403 | Cyp154c1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d3b55a1 | 403 | Succinoglycan biosynthesis protein BC3120 {Bacillu | 100.0 | |
| d2g5da1 | 402 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 100.0 | |
| d1dofa_ | 402 | Adenylosuccinate lyase {Archaeon Pyrobaculum aerop | 100.0 | |
| d1z8oa1 | 402 | Cytochrome P450-ERYF {Saccharopolyspora erythraea | 100.0 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 100.0 | |
| g1w2w.1 | 402 | Putative methylthioribose-1-phosphate isomerase Yp | 100.0 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1fc4a_ | 401 | 2-amino-3-ketobutyrate CoA ligase {Escherichia col | 100.0 | |
| d2h6fb1 | 401 | Protein farnesyltransferase, beta-subunit {Human ( | 100.0 | |
| d1q5da_ | 401 | Cytochrome P450epok {Sorangium cellulosum [TaxId: | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jdpa_ | 401 | Hormone binding domain of the atrial natriuretic p | 100.0 | |
| d7aata_ | 401 | Aspartate aminotransferase, AAT {Chicken (Gallus g | 100.0 | |
| d2r7da2 | 401 | Ribonuclease II family protein DR0020 {Deinococcus | 100.0 | |
| d1odoa_ | 401 | Cyp154a1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1ru4a_ | 400 | Pectate transeliminase {Erwinia chrysanthemi [TaxI | 100.0 | |
| d1tq4a_ | 400 | Interferon-inducible GTPase {Mouse (Mus musculus) | 100.0 | |
| d3ovwa_ | 400 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1inpa_ | 400 | Inositol polyphosphate 1-phosphatase {Cow (Bos tau | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 100.0 | |
| d1oyaa_ | 399 | Old yellow enzyme (OYE) {Lager yeast (Saccharomyce | 100.0 | |
| d1jfba_ | 399 | Cytochrome P450-NOR, nitric reductase {Fungus (Fus | 100.0 | |
| d1s1fa_ | 399 | Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | 100.0 | |
| d1bn8a_ | 399 | Pectate lyase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 100.0 | |
| d1ojja_ | 399 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1vpea_ | 398 | Phosphoglycerate kinase {Thermotoga maritima [TaxI | 100.0 | |
| d1qgna_ | 398 | Cystathionine gamma-synthase, CGS {Common tobacco | 100.0 | |
| d1vlja_ | 398 | NADH-dependent butanol dehydrogenase A (TM0820) {T | 100.0 | |
| d1y4ia1 | 397 | Methionine gamma-lyase, MGL {Citrobacter freundii | 100.0 | |
| d1q1la_ | 397 | Chorismate synthase, AroC {Aquifex aeolicus [TaxId | 100.0 | |
| d1vkoa1 | 397 | Myo-inositol 1-phosphate synthase {Caenorhabditis | 100.0 | |
| d3tata_ | 397 | Aromatic aminoacid aminotransferase, AroAT {Escher | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d1lf6a1 | 397 | Bacterial glucoamylase, C-terminal domain {Thermoa | 100.0 | |
| d2bwna1 | 396 | 5-aminolevulinate synthase {Rhodobacter capsulatus | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d2q7wa1 | 396 | Aspartate aminotransferase, AAT {Escherichia coli | 100.0 | |
| d1io1a_ | 395 | Phase 1 flagellin {Salmonella typhimurium [TaxId: | 100.0 | |
| g1f8v.1 | 395 | Alphanodavirus capsid protein {Pariacoto virus [Ta | 100.0 | |
| d2bfda1 | 395 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 100.0 | |
| d1aora1 | 395 | Aldehyde ferredoxin oxidoreductase {Archaeon Pyroc | 100.0 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 100.0 | |
| d1w36b2 | 395 | Exodeoxyribonuclease V beta chain (RecB), N-termin | 100.0 | |
| d1xi9a_ | 395 | Putative alanine aminotransferase {Pyrococcus furi | 100.0 | |
| d1n40a_ | 395 | Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub | 100.0 | |
| d1e5ea_ | 394 | Methionine gamma-lyase, MGL {Trichomonas vaginalis | 100.0 | |
| d1phpa_ | 394 | Phosphoglycerate kinase {Bacillus stearothermophil | 100.0 | |
| d1u1ha1 | 394 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d2ay1a_ | 394 | Aromatic aminoacid aminotransferase, AroAT {Paraco | 100.0 | |
| d1c7na_ | 394 | Cystalysin {Treponema denticola [TaxId: 158]} | 100.0 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1lfka_ | 394 | p450 monoxygenase OxyB {Amycolatopsis orientalis [ | 100.0 | |
| d1q8ia2 | 394 | Family B DNA polymerase {Escherichia coli [TaxId: | 100.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1ldja2 | 394 | Cullin homolog 1, Cul-1 {Human (Homo sapiens) [Tax | 100.0 | |
| d1n8pa_ | 393 | Cystathionine gamma-lyase (CYS3) {Baker's yeast (S | 100.0 | |
| d1xlma_ | 393 | D-xylose isomerase {Arthrobacter, strain b3728 [Ta | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 100.0 | |
| d1g8ma2 | 393 | AICAR transformylase domain of bifunctional purine | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d1gc0a_ | 392 | Methionine gamma-lyase, MGL {Pseudomonas putida [T | 100.0 | |
| d2d0ta1 | 392 | Indoleamine 2,3-dioxygenase {Human (Homo sapiens) | 100.0 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 100.0 | |
| d1xima_ | 392 | D-xylose isomerase {Actinoplanes missouriensis [Ta | 100.0 | |
| d1yvua2 | 392 | Argonaute homologue Aq_1447 {Aquifex aeolicus [Tax | 100.0 | |
| d1cl1a_ | 391 | Cystathionine beta-lyase, CBL {Escherichia coli [T | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 100.0 | |
| d1p3wa_ | 391 | Cysteine desulfurase IscS {Escherichia coli [TaxId | 100.0 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 100.0 | |
| d1v6sa_ | 390 | Phosphoglycerate kinase {Thermus thermophilus [Tax | 100.0 | |
| d1nsca_ | 390 | Influenza neuraminidase {Influenza B virus, differ | 100.0 | |
| d1qopb_ | 390 | Tryptophan synthase, beta-subunit {Salmonella typh | 100.0 | |
| d1oj7a_ | 390 | Hypothetical oxidoreductase yqhD {Escherichia coli | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 100.0 | |
| d1sg6a_ | 389 | Dehydroquinate synthase, DHQS {Aspergillus nidulan | 100.0 | |
| d2gb3a1 | 389 | AAT homologue TM1698 {Thermotoga maritima [TaxId: | 100.0 | |
| d1jiha2 | 389 | DNA polymerase eta {Baker's yeast (Saccharomyces c | 100.0 | |
| d2o3ia1 | 389 | Hypothetical protein CV3147 {Chromobacterium viola | 100.0 | |
| d1f8ea_ | 388 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 100.0 | |
| d1u7la_ | 388 | Vacuolar ATP synthase subunit C {Baker's yeast (Sa | 100.0 | |
| d1qxoa_ | 388 | Chorismate synthase, AroC {Streptococcus pneumonia | 100.0 | |
| d1eepa_ | 388 | Inosine monophosphate dehydrogenase (IMPDH) {Lyme | 100.0 | |
| d2ch1a1 | 388 | 3-hydroxykynurenine transaminase {Malaria mosquito | 100.0 | |
| d2py5a2 | 388 | phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d1q8ia1 | 388 | Exonuclease domain of family B DNA polymerases {Es | 100.0 | |
| d1h0ca_ | 388 | Alanine-glyoxylate aminotransferase {Human (Homo s | 100.0 | |
| d1gdea_ | 388 | Aromatic aminoacid aminotransferase, AroAT {Archae | 100.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1j32a_ | 388 | Aspartate aminotransferase, AAT {Phormidium lapide | 100.0 | |
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1zeea1 | 387 | Hypothetical protein SO4414 {Shewanella oneidensis | 100.0 | |
| d2aepa1 | 387 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 100.0 | |
| d1zsqa2 | 387 | Myotubularin-related protein 2, C-terminal domain | 100.0 | |
| d1vefa1 | 387 | Acetylornithine/acetyl-lysine aminotransferase Arg | 100.0 | |
| d1bxba_ | 387 | D-xylose isomerase {Thermus aquaticus, subsp. Ther | 100.0 | |
| d2ex0a1 | 387 | Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteur | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 100.0 | |
| d1v8za1 | 386 | Tryptophan synthase, beta-subunit {Archaeon Pyroco | 100.0 | |
| d1r6ta2 | 386 | Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo | 100.0 | |
| d1muwa_ | 386 | D-xylose isomerase {Streptomyces olivochromogenes | 100.0 | |
| d3c10a1 | 386 | Histone deacetylase 7, HDAC7 {Human (Homo sapiens) | 100.0 | |
| d1v5da_ | 386 | Chitosanase {Bacillus sp., strain k17 [TaxId: 1409 | 100.0 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 100.0 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 100.0 | |
| d1xmxa_ | 385 | Hypothetical protein VC1899 {Vibrio cholerae [TaxI | 100.0 | |
| d1uhga_ | 385 | Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d2ix0a4 | 385 | Exoribonuclease 2, RNB {Escherichia coli [TaxId: 5 | 100.0 | |
| d1ir6a_ | 385 | Exonuclease RecJ {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1n97a_ | 385 | Cyp175a1 {Thermus thermophilus [TaxId: 274]} | 100.0 | |
| d2c5wb1 | 385 | Penicillin-binding protein 1a, transpeptidase doma | 100.0 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 100.0 | |
| d1cs1a_ | 384 | Cystathionine gamma-synthase, CGS {Escherichia col | 100.0 | |
| d3c0na2 | 384 | (Pro)aerolysin, pore-forming lobe {Aeromonas hydro | 100.0 | |
| d1mtyb_ | 384 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1b9ha_ | 384 | 3-amino-5-hydroxybenzoic acid synthase (AHBA synth | 100.0 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 100.0 | |
| d1hn0a1 | 384 | Chondroitin ABC lyase I {Proteus vulgaris [TaxId: | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d1vz6a_ | 383 | Glutamate N-acetyltransferase 2 (ornithine acetylt | 100.0 | |
| d1bs0a_ | 383 | PLP-dependent acyl-CoA synthase (8-amino-7-oxonano | 100.0 | |
| d1mhyb_ | 383 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1u7ga_ | 383 | Ammonium transporter AmtB {Escherichia coli [TaxId | 100.0 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1imva_ | 383 | Pigment epithelium-derived factor, PEDF {Human (Ho | 100.0 | |
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1u08a_ | 382 | Putative methionine aminotransferase YdbL {Escheri | 100.0 | |
| d2bkwa1 | 382 | Alanine-glyoxylate aminotransferase {Baker's yeast | 100.0 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d1b5pa_ | 382 | Aspartate aminotransferase, AAT {Thermus thermophi | 100.0 | |
| d1xl7a1 | 382 | Peroxisomal carnitine O-octanoyltransferase, COT { | 100.0 | |
| d1t1ua1 | 382 | Choline O-acetyltransferase {Rat (Rattus norvegicu | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d1by7a_ | 381 | Plasminogen activator inhibitor-2 {Human (Homo sap | 100.0 | |
| d1elua_ | 381 | Cystine C-S lyase C-des {Synechocystis sp. [TaxId: | 100.0 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 100.0 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 100.0 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 100.0 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1vbga3 | 380 | Pyruvate phosphate dikinase, N-terminal domain {Ma | 100.0 | |
| d1ibja_ | 380 | Cystathionine beta-lyase, CBL {Thale cress (Arabid | 100.0 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 100.0 | |
| d1q45a_ | 380 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1elja_ | 380 | D-maltodextrin-binding protein, MBP {Archaeon Pyro | 100.0 | |
| d1lj5a_ | 379 | Plasminogen activator inhibitor-1 {Human (Homo sap | 100.0 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 100.0 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 100.0 | |
| d1jr1a1 | 378 | Inosine monophosphate dehydrogenase (IMPDH) {Chine | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1xqga_ | 378 | Maspin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 100.0 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 100.0 | |
| d1vjoa_ | 377 | Alanine-glyoxylate aminotransferase {Cyanobacteria | 100.0 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d2i71a1 | 377 | Hypothetical protein SSO1389 {Sulfolobus solfatari | 100.0 | |
| d1jmma_ | 377 | V-region of surface antigen I/II (SA I/II, PAC) {S | 100.0 | |
| d1nm8a1 | 377 | Carnitine acetyltransferase {Human (Homo sapiens) | 100.0 | |
| d1mdoa_ | 376 | Aminotransferase ArnB {Salmonella typhimurium [Tax | 100.0 | |
| d1k9oi_ | 376 | Alaserpin (serpin 1) {Tobacco hornworm (Manduca se | 100.0 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 100.0 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 100.0 | |
| d1wu4a1 | 376 | Xylanase Y {Bacillus halodurans [TaxId: 86665]} | 100.0 | |
| d2v3qa1 | 376 | PstS-like phosphate-binding protein {Human (Homo s | 100.0 | |
| d1eg5a_ | 376 | NifS-like protein/selenocysteine lyase {Thermotoga | 100.0 | |
| d1bhea_ | 376 | Polygalacturonase {Erwinia carotovora, subsp. caro | 100.0 | |
| d2fug41 | 375 | NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus | 100.0 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 100.0 | |
| d1o4sa_ | 375 | Aspartate aminotransferase, AAT {Thermotoga mariti | 100.0 | |
| d1ih7a1 | 375 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| g1hle.1 | 375 | Elastase inhibitor {Horse (Equus caballus) [TaxId: | 100.0 | |
| d1kbla3 | 375 | Pyruvate phosphate dikinase, N-terminal domain {Cl | 100.0 | |
| d1txka2 | 374 | Glucans biosynthesis protein G (MdoG, OpgG), N-ter | 100.0 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d2a0ua1 | 374 | Initiation factor 2b {Leishmania major [TaxId: 566 | 100.0 | |
| d1o69a_ | 374 | Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam | 100.0 | |
| d1nd7a_ | 374 | WW domain-containing protein 1, WWP1 {Human (Homo | 100.0 | |
| d1gwja_ | 374 | Morphinone reductase {Pseudomonas putida [TaxId: 3 | 100.0 | |
| d1rp4a_ | 374 | Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast | 100.0 | |
| d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacte | 100.0 | |
| d1so7a_ | 374 | Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 100.0 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 100.0 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 100.0 | |
| d1ogmx2 | 373 | Dextranase, catalytic domain {Penicillium miniolut | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1qo0a_ | 373 | Amide receptor/negative regulator of the amidase o | 100.0 | |
| d1m0wa2 | 373 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d1r5ya_ | 372 | Queosine tRNA-guanine transglycosylase {Zymomonas | 100.0 | |
| d1c3pa_ | 372 | HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | 100.0 | |
| d1noya_ | 372 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1qlpa_ | 372 | Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 100.0 | |
| d1vkpa_ | 372 | Agmatine iminohydrolase {Thale-cress (Arabidopsis | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d1mkfa_ | 371 | Viral chemokine binding protein m3 {Murid herpesvi | 100.0 | |
| d1r53a_ | 371 | Chorismate synthase, AroC {Baker's yeast (Saccharo | 100.0 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1to6a_ | 371 | Glycerate kinase GlxK {Neisseria meningitidis, (se | 100.0 | |
| d1c8ba_ | 371 | Germination protease {Bacillus megaterium [TaxId: | 100.0 | |
| d1n7oa1 | 371 | Hyaluronate lyase {Streptococcus pneumoniae [TaxId | 100.0 | |
| d1f1sa1 | 371 | Hyaluronate lyase {Streptococcus agalactiae [TaxId | 100.0 | |
| d1eg1a_ | 371 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2fnua1 | 371 | Spore coat polysaccharide biosynthesis protein C { | 100.0 | |
| d2dexx3 | 370 | Peptidylarginine deiminase Pad4, catalytic C-termi | 100.0 | |
| d2gx8a1 | 370 | Nif3-related protein BC4286 {Bacillus cereus [TaxI | 100.0 | |
| d2hgsa4 | 370 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d1itua_ | 369 | Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d1rwha1 | 369 | Chondroitinase AC {Arthrobacter aurescens [TaxId: | 100.0 | |
| d2heka1 | 369 | Hypothetical protein aq_1910 {Aquifex aeolicus [Ta | 100.0 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 100.0 | |
| g1as4.1 | 369 | Antichymotrypsin, alpha-1 {Human (Homo sapiens) [T | 100.0 | |
| d2ewoa1 | 369 | Agmatine iminohydrolase {Streptococcus mutans [Tax | 100.0 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 100.0 | |
| d1laxa_ | 369 | D-maltodextrin-binding protein, MBP {Escherichia c | 100.0 | |
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d2cu0a1 | 368 | Inosine monophosphate dehydrogenase (IMPDH) {Pyroc | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [T | 100.0 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonell | 100.0 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 100.0 | |
| d1v2da_ | 368 | Glutamine aminotransferase {Thermus thermophilus [ | 100.0 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 100.0 | |
| d1d3ga_ | 367 | Dihydroorotate dehydrogenase {Human (Homo sapiens) | 100.0 | |
| d1b65a_ | 367 | L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochr | 100.0 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 100.0 | |
| d1ue8a_ | 367 | Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 100.0 | |
| d1ursa_ | 367 | D-maltodextrin-binding protein, MBP {Alicyclobacil | 100.0 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 100.0 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 100.0 | |
| d1moqa_ | 366 | "Isomerase domain" of glucosamine 6-phosphate synt | 100.0 | |
| d1io7a_ | 366 | Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 | 100.0 | |
| d1h6za1 | 366 | Pyruvate phosphate dikinase, C-terminal domain {Tr | 100.0 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 100.0 | |
| d1jq5a_ | 366 | Glycerol dehydrogenase {Bacillus stearothermophilu | 100.0 | |
| d2aeua1 | 366 | Hypothetical protein MJ0158 {Archaeon Methanococcu | 100.0 | |
| d1u5ua_ | 366 | Allene oxide synthase-lipoxygenase protein, N-term | 100.0 | |
| d1fn9a_ | 365 | Outer capsid protein sigma 3 {Reovirus [TaxId: 108 | 100.0 | |
| d1um0a_ | 365 | Chorismate synthase, AroC {Helicobacter pylori [Ta | 100.0 | |
| d2pnwa1 | 365 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1w85a_ | 365 | Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st | 100.0 | |
| d1u1ha2 | 365 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1zkda1 | 365 | Hypothetical protein RPA4359 {Rhodopseudomonas pal | 100.0 | |
| d1zfja1 | 365 | Inosine monophosphate dehydrogenase (IMPDH) {Strep | 100.0 | |
| d3c8ya1 | 365 | Fe-only hydrogenase, catalytic domain {Clostridium | 100.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 100.0 | |
| d2jera1 | 364 | Agmatine iminohydrolase {Enterococcus faecalis [Ta | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1icpa_ | 364 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 100.0 | |
| d1t64a_ | 364 | Histone deacetylase 8, HDAC8 {Human (Homo sapiens) | 100.0 | |
| d1kbla1 | 364 | Pyruvate phosphate dikinase, C-terminal domain {Cl | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1kq3a_ | 364 | Glycerol dehydrogenase {Thermotoga maritima [TaxId | 100.0 | |
| d2e7ja1 | 364 | Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl | 100.0 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 100.0 | |
| d1oc7a_ | 364 | Cellobiohydrolase II (Cel6) {Humicola insolens, Ce | 100.0 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 100.0 | |
| d1m7va_ | 363 | Nitric oxide (NO) synthase oxygenase domain {Bacil | 100.0 | |
| d1zaia1 | 363 | Fructose-1,6-bisphosphate aldolase {Rabbit (Orycto | 100.0 | |
| d1khba1 | 363 | Cytosolic phosphoenolpyruvate carboxykinase (GTP-h | 100.0 | |
| d1zq1a2 | 363 | Glutamyl-tRNA(Gln) amidotransferase subunit D, Gat | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 100.0 | |
| d1vyra_ | 363 | Pentaerythritol tetranirate reductase {Enterobacte | 100.0 | |
| d1cnza_ | 363 | 3-isopropylmalate dehydrogenase, IPMDH {Salmonella | 100.0 | |
| d1kwfa_ | 363 | CelA cellulase {Clostridium thermocellum [TaxId: 1 | 100.0 | |
| d2a1ha1 | 363 | Branched-chain aminoacid aminotransferase {Human ( | 100.0 | |
| d1umga_ | 362 | ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1gqea_ | 362 | Polypeptide chain release factor 2 (RF2) {Escheric | 100.0 | |
| d1umda_ | 362 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 100.0 | |
| d1pvna1 | 362 | Inosine monophosphate dehydrogenase (IMPDH) {Tritr | 100.0 | |
| d3thia_ | 362 | Thiaminase I {Paenibacillus thiaminolyticus [TaxId | 100.0 | |
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 100.0 | |
| d1vlca_ | 362 | 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga | 100.0 | |
| d1nqka_ | 362 | Alkanesulfonate monooxygenase SsuD {Escherichia co | 100.0 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1qjwa_ | 362 | Cellobiohydrolase II (Cel6) {Trichoderma reesei, C | 100.0 | |
| d2ozla1 | 361 | E1-beta subunit of pyruvate dehydrogenase (PP modu | 100.0 | |
| d1dhsa_ | 361 | Deoxyhypusine synthase, DHS {Human (Homo sapiens) | 100.0 | |
| d2c0ra1 | 361 | Phosphoserine aminotransferase, PSAT {Bacillus cir | 100.0 | |
| d1x1ia1 | 361 | Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | 100.0 | |
| d1m32a_ | 361 | 2-aminoethylphosphonate transaminase {Salmonella t | 100.0 | |
| d1lt7a_ | 361 | Betaine-homocysteine S-methyltransferase {Human (H | 100.0 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 100.0 | |
| d1d2fa_ | 361 | Modulator in mal gene expression, MalY {Escherichi | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d1pe9a_ | 361 | Pectate lyase {Erwinia chrysanthemi, type A [TaxId | 100.0 | |
| d1sq1a_ | 360 | Chorismate synthase, AroC {Campylobacter jejuni [T | 100.0 | |
| d1qo5a_ | 360 | Fructose-1,6-bisphosphate aldolase {Human (Homo sa | 100.0 | |
| d1jdwa_ | 360 | L-arginine: glycine amidinotransferase {Human (Hom | 100.0 | |
| d1bjna_ | 360 | Phosphoserine aminotransferase, PSAT {Escherichia | 100.0 | |
| d1w23a_ | 360 | Phosphoserine aminotransferase, PSAT {Bacillus alc | 100.0 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 100.0 | |
| d1xfia_ | 360 | Hypothetical protein At2g17340 {Thale cress (Arabi | 100.0 | |
| d1oxwa_ | 360 | Patatin {Heartleaf nightshade (Solanum cardiophyll | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d4bcla_ | 359 | Bacteriochlorophyll A protein {Prosthecochloris ae | 100.0 | |
| d1goxa_ | 359 | Glycolate oxidase {Spinach (Spinacia oleracea) [Ta | 100.0 | |
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 100.0 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 100.0 | |
| d1yvra1 | 359 | 60-kda SS-aARo ribonucleoprotein {African clawed f | 100.0 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1qcxa_ | 359 | Pectin lyase {Aspergillus niger, type B [TaxId: 50 | 100.0 | |
| d1idka_ | 359 | Pectin lyase {Aspergillus niger, type A [TaxId: 50 | 100.0 | |
| d1o2da_ | 359 | Alcohol dehydrogenase TM0920 {Thermotoga maritima | 100.0 | |
| g1lq8.1 | 358 | Protein C inhibitor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 100.0 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1dosa_ | 358 | Fructose-bisphosphate aldolase (FBP aldolase) {Esc | 100.0 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d1taza_ | 357 | Catalytic domain of cyclic nucleotide phosphodiest | 100.0 | |
| d2qapa1 | 357 | Fructose-1,6-bisphosphate aldolase {Trypanosome (L | 100.0 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 100.0 | |
| d1a05a_ | 357 | 3-isopropylmalate dehydrogenase, IPMDH {Thiobacill | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 100.0 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d16vpa_ | 356 | Conserved core of transcriptional regulatory prote | 100.0 | |
| d1r3sa_ | 356 | Uroporphyrinogen decarboxylase, UROD {Human (Homo | 100.0 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 100.0 | |
| d1v53a1 | 356 | 3-isopropylmalate dehydrogenase, IPMDH {Bacillus c | 100.0 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 100.0 | |
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 100.0 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 100.0 | |
| d2ebsa2 | 356 | Oligoxyloglucan reducing end-specific cellobiohydr | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d1vbga1 | 356 | Pyruvate phosphate dikinase, C-terminal domain {Ma | 100.0 | |
| d1fuia2 | 355 | L-fucose isomerase, N-terminal and second domains | 100.0 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 100.0 | |
| d1luca_ | 355 | Bacterial luciferase alpha chain, LuxA {Vibrio har | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1iq8a1 | 355 | Archaeosine tRNA-guanine transglycosylase, N-termi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 100.0 | |
| g1mtp.1 | 355 | Thermopin {Thermobifida fusca [TaxId: 2021]} | 100.0 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 |
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=31717.40 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~w~~~~~~~~~~~~~viYe~~~~~f~~~Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G 80 (420)
T d2bhua3 1 TFDWTDADWHGIKLADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYG 80 (420)
T ss_dssp SSCCCCTTCCCCCGGGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 96899989798884224899996002188999999998679999769998995998768888998888566888685659
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVD 160 (420)
T d2bhua3 81 RPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD 160 (420)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC
T ss_conf 99999999999974054534465535667777633334443334554322345545368699999988764032014653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 GfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
T d2bhua3 161 GLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTDDFHHETRVTLTGEQEGYYAGYR 240 (420)
T ss_dssp EEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCCTHHHHTTCCSEEECTHHHHHHHHHHHCCCSGGGGGCC
T ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 78873333202122310079998888764687425620357753121001125422323210444301334445312330
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~nHD~~~~~~~~~r~~~~~~~~~~~~k~a~~~ll 320 (420)
T d2bhua3 241 GGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHEYRGAAALLL 320 (420)
T ss_dssp CSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTSTTCCCGGGSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHCHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 26678999985144446520443153554126433455213034321566323553112356643565999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 t~pG~P~iy~GdEig~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 400 (420)
T d2bhua3 321 TLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPDPQAEQTFLNSKLNWAEREGGEHART 400 (420)
T ss_dssp HSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCCTTSHHHHHTTSCCSGGGGSHHHHHH
T ss_pred HCCCCCEEECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
T ss_conf 48998798577511789986323456402203544466311367776665557886555544456678788623476899
Q ss_pred -------------------C
Q ss_conf -------------------6
Q 001706 633 -------------------S 633 (1024)
Q Consensus 633 -------------------~ 633 (1024)
.
T Consensus 401 ~~~yr~Li~lRk~~p~l~~~ 420 (420)
T d2bhua3 401 LRLYRDLLRLRREDPVLHNR 420 (420)
T ss_dssp HHHHHHHHHHHHHCTTTTCC
T ss_pred HHHHHHHHHHHHCCHHHHCC
T ss_conf 99999999999568987575
|
| >d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: EPT/RTPC-like family: Enolpyruvate transferase, EPT domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=31647.21 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~s~D~~~~~~al~~LG~~I~~~~~~~I~~~~~~~~ 80 (419)
T d1ejda_ 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERDGSVWIDASNVNNF 80 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESSSEEEECTTCCCC
T ss_pred CCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC
T ss_conf 98699948890477997888389999999999984998999259901999999999997799899898799989997777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~~~~g~~~~~i~g~l~g~~~~~~~ 160 (419)
T d1ejda_ 81 SAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDK 160 (419)
T ss_dssp EECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTEEEEECSSSCBCCEEECSS
T ss_pred CCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCEEECCC
T ss_conf 66554540354320024425665277524666643457774267889998536169962892445337886674674587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Ssq~~s~llla~~~~~g~~~i~~~~~~~~i~~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~ 240 (419)
T d1ejda_ 161 VSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLV 240 (419)
T ss_dssp CCHHHHHHHHHHHTTSBSEEEEETCCCCHHHHHHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHH
T ss_conf 62567788984455237963542024441566677776522010011795499980542346774053570664311333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 aa~i~g~~i~i~~~~~~~~~~~~~~l~~mg~~i~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 320 (419)
T d1ejda_ 241 AAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGT 320 (419)
T ss_dssp HHHTTTCEEEEESCCGGGCHHHHHHHHHTTCEEEECSSEEEEECTTCCCBCCCEECCSTTSCCGGGHHHHHHHHHTSBSE
T ss_pred HHCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCC
T ss_conf 22156865521677806778898876642313997377699997676544300256632234421145541222187361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~ke~dr~~~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiAMa~aia~l~~~g~~~I~~~~~i~~SyP 400 (419)
T d1ejda_ 321 GVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYE 400 (419)
T ss_dssp EEEECCSCSSCCTHHHHHHHTTCEEEEETTEEEEECCSCCBCCEECCSSHHHHHHHHHHHHHSBEEEEECCTHHHHHHSS
T ss_pred EEEEEECCCHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEECCCEEEECCCH
T ss_conf 67764023438789999996889799969999997999863761613838999999999981999499836137868734
Q ss_pred ------------------C
Q ss_conf ------------------6
Q 001706 633 ------------------S 633 (1024)
Q Consensus 633 ------------------~ 633 (1024)
.
T Consensus 401 ~F~~~l~~LGa~I~~~~~~ 419 (419)
T d1ejda_ 401 RIEDKLRALGANIERVKGE 419 (419)
T ss_dssp SHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEECCC
T ss_conf 0999999679899997179
|
| >d2df7a1 b.121.4.9 (A:11-429) Birnavirus VP2 {Infectious bursal disease virus [TaxId: 10995]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: Positive stranded ssRNA viruses family: Birnaviridae-like VP domain: Birnavirus VP2 species: Infectious bursal disease virus [TaxId: 10995]
Probab=100.00 E-value=0 Score=31653.34 Aligned_cols=1 Identities=100% Similarity=1.002 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~ylksll~PetgpasIPDD~~~rH~l~~etstyNL~~~~sGsGllv~fp~~P~s~vGaHY~~~~~~~l~FDq~l~TsQ 80 (419)
T d2df7a1 1 IVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQ 80 (419)
T ss_dssp CCHHHHHHHCGGGCCCCCCSSCCCCBEEEEEEEEEEEECCTTSCEEEEECTTCSSSEEEEEEEECTTSCEEEEEEEECSS
T ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHHH
T ss_conf 91465554285678878971788877542033045369726885699991799875210278972788576465556667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 dLkk~~nYgRliSr~~~i~SstLPaGvYAlnGT~Na~tf~GslSEv~~~sYn~lmS~ttN~~DKv~NvLV~~GVtVLsLP 160 (419)
T d2df7a1 81 NLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLP 160 (419)
T ss_dssp CGGGTEEEEEEEEEEEEEEECCCCTTCCBCCCEEEEEEESSCGGGCSCCSTTGGGGSCSCGGGEEEEEETTTCEEEECCC
T ss_pred HHHHHHCHHHHHCEEEEEEECCCCCEEEEECCEEEEEEEECCHHHHHCCCHHHHEECCCCHHHHHCCEEECCCEEEEECC
T ss_conf 66766333321002466651357743455246154589824667600246101002126802530789823864999757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 TgfD~pYVRLgDetP~~gl~p~~~a~ct~a~~PR~Y~I~~a~~yq~~sq~q~gGtt~Tlfs~NiDavtSlsVtGdivFq~ 240 (419)
T d2df7a1 161 TSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVTITLFSANIDAITSLSIGGELVFHT 240 (419)
T ss_dssp SCSSCCCEECCEECCCCCSCTTCCCEECCCSSCEEEEEEEEEEEEEEEECCTTCEEEEEEEEEEEESSCEEEEEEEEEEC
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEE
T ss_conf 66788735647888765778765430365568733575367545547755678688898750001104267400699972
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~dati~~IG~DGt~vi~~avas~nGlt~G~dn~~pfnlviPT~eITqPITsIKLeivt~k~gg~ag~~~s~~~~ 320 (419)
T d2df7a1 241 SVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSAS 320 (419)
T ss_dssp SSSSEEEEEEEEEEETTSCEEEEEEEEEEEECCTTSCEEEEEEEEECGGGCCSCEEEEEEEEEEEETTCCTTCEEEEEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 36651873799996326974788899706765356355443103236776775512789999952136754753222456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 gs~svT~~gGN~PGvLRPvTlVAYE~vapgsilTVaGVSNyELIPNPeL~KN~~t~yG~~dP~~l~y~K~iLs~Re~L~i 400 (419)
T d2df7a1 321 GSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGI 400 (419)
T ss_dssp EEEEEEETTTTSTTSSCCEEEEEEESCCTTCEEEEEEEEEEEEEECHHHHTTCCCBCCCCCTTHHHHHHHHHHTHHHHTC
T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCHHHCCHHHHHHCCHHHCCC
T ss_conf 64699965887778768658999840257746999602451324897897406332356583434288777434311486
Q ss_pred ------------------C
Q ss_conf ------------------6
Q 001706 633 ------------------S 633 (1024)
Q Consensus 633 ------------------~ 633 (1024)
-
T Consensus 401 rtvw~~~~Y~~~~~~f~e~ 419 (419)
T d2df7a1 401 KTVWPTREYTDFREYFMEV 419 (419)
T ss_dssp CSEEEHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHCC
T ss_conf 3660277878999887439
|
| >d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=31577.50 Aligned_cols=1 Identities=0% Similarity=-1.891 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~p~~~~~~p~~~~~~e~ll~~A~~Fi~qyy~e~~~~~~~~~~ 80 (418)
T d1om4a_ 1 RFLKVKNWETDVVLTDTLHLKSTLETGCTEHICMGSIMLPSQHTRKPEDVRTKDQLFPLAKEFLDQYYSSIKRFGSKAHM 80 (418)
T ss_dssp CCEEEEBTTTCCEEEECGGGGCCSCCSCCSSCBCTTCSCC-----------CHHHHHHHHHHHHHHHHHHTTCTTSHHHH
T ss_pred CCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 95245540478756320434167889987564366222453457888889987899999999999999863435868999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Rl~ev~~eI~~tGtY~~T~~EL~~GAk~AWRNs~RCIGRi~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~Ir~~ 160 (418)
T d1om4a_ 81 DRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSA 160 (418)
T ss_dssp HHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSCCCE
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 99999999997455620899999887899870454233500116571565678999899999999999997079987623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ITVFpp~~~~~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLviq~~g~~p~~feiP~ 240 (418)
T d1om4a_ 161 ITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKAPRGRFDVLPLLLQANGNDPELFQIPP 240 (418)
T ss_dssp EEECCCCSSSSSCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHTTTCCCCCCTTCBCCEEEECTTCCCEEECCCG
T ss_pred EEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCH
T ss_conf 89737988899986565488886626568998764783137999999976898999987702089997899972574887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRNl~D~~RYN~L~~VA~~mGLDT 320 (418)
T d1om4a_ 241 ELVLEVPIRHPKFDWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMDLDM 320 (418)
T ss_dssp GGCCEEECCCSSCTTGGGGCCEEESCCCBCSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHHTCCC
T ss_pred HHEEEECCCCCCCHHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78246435598975477559837625011365232088855346745341123365415667565664899999849788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~Sgs~tpvfH~~~~n~ 400 (418)
T d1om4a_ 321 RKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNY 400 (418)
T ss_dssp SCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCCCCHHHHSCSSSGGGSGGGGBCCCBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHCC
T ss_conf 99740577889999999999899887964805278999999999999981899998852777888653441677765353
Q ss_pred -----------------C
Q ss_conf -----------------6
Q 001706 633 -----------------S 633 (1024)
Q Consensus 633 -----------------~ 633 (1024)
=
T Consensus 401 ~l~P~f~yq~~~w~th~w 418 (418)
T d1om4a_ 401 RLTPSFEYQPDPWNTHVW 418 (418)
T ss_dssp CCSSEEECCCCGGGTCCC
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 147886557986446789
|
| >d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IlvD/EDD N-terminal domain-like superfamily: IlvD/EDD N-terminal domain-like family: lvD/EDD N-terminal domain-like domain: 6-phosphogluconate dehydratase EDD species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=31573.29 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~i~~vt~rI~~RS~~~r~~Yl~~i~~~~~~~~~r~~l~c~nlAh~~aa~~~~dk~~l~d~~kP~IGIvns~~d~~pc 80 (418)
T d2gp4a2 1 MHSVVQSVTDRIIARSKASREAYLAALNDARNHGVHRSSLSCGNLAHGFAACNPDDKNALRQLTKANIGIITAFNDMLSA 80 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97179999999999708779999999999875488711135521777887068302556763179969998352346464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 h~hl~~l~~~vK~gv~~~gg~~~~~~~~p~~cDGit~G~~GM~~SL~SRelIA~siE~~~~~~~~Dg~V~l~~CDK~vPG 160 (418)
T d2gp4a2 81 HQPYETYPDLLKKACQEVGSVAQVAGGVPAMCDGVTQGQPGMELSLLSREVIAMATAVGLSHNMFDGALLLGICDKIVPG 160 (418)
T ss_dssp ---------CCC---CCCCEEEEECC-BC--CCCCCCSSSGGGGHHHHHHHHHHHHHHHHTTCCCSEEEEECCSTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH
T ss_conf 24299999999999997178663567645534651378653013130022789899998624765617997338998768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~lMaa~r~n~lPsI~v~gGpm~~G~~~~~~~~~~~~~~~G~i~~~el~~~E~~a~p~~GtC~~mgTANTm~~l~EalGl~ 240 (418)
T d2gp4a2 161 LLIGALSFGHLPMLFVPAGPMKSGIPNKEKARIRQQFAQGKVDRAQLLEAEAQSYHSAGTCTFYGTANSNQLMLEVMGLQ 240 (418)
T ss_dssp HHHHHHTTTTSCEEECCCCC-------------------CCTHHHHHHHTTSSCHHHHHHHHHCC-----CHHHHHTTCS
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999843678779971577689746777725753032233569999999874668878663267798999999971567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 LPGsa~vpa~~~~r~~~a~~ag~~~~~~~~~~~~~~~~~dIlt~~a~~NAi~~~~A~GGSTNavlHL~AIA~eaGi~l~l 320 (418)
T d2gp4a2 241 LPGSSFVNPDDPLREALNKMAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLTMHIVAAARAAGIIVNW 320 (418)
T ss_dssp CTTGGGSCTTCHHHHHHHHHHHHHHHHTSTTSSSCCCHHHHSSHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHTTCCCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCH
T ss_conf 52124788861899999998999999999851267897786199999711168760562675320629999654898989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~dfd~is~~~P~L~~l~P~G~~~m~d~~~AGGvp~v~k~L~~~glLh~D~~TVtG~tl~e~l~~~~~~~~~i~~~~~p~~ 400 (418)
T d2gp4a2 321 DDFSELSDAVPLLARVYPNGHADINHFHAAGGMAFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTV 400 (418)
T ss_dssp HHHHHHHTTCCBCBCCGGGSSCCHHHHHHHTHHHHHHHHHHHHTCSCCCCEETTEECGGGGGEEEEEETTEEEEEECCSS
T ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCC
T ss_conf 99999857888544441598621889876069999999998788856999883886799997077766774000468777
Q ss_pred -----------------C
Q ss_conf -----------------6
Q 001706 633 -----------------S 633 (1024)
Q Consensus 633 -----------------~ 633 (1024)
.
T Consensus 401 ~~d~~VIrp~~~P~~~~G 418 (418)
T d2gp4a2 401 SLDTEVLTSVATPFQNNG 418 (418)
T ss_dssp CSCTTTBCCSSSCSBSSC
T ss_pred CCCCCEECCCCCCCCCCC
T ss_conf 899887576555779999
|
| >d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=31568.20 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~pRw~~i~r~yta~dv~~lrgs~~~~~~~a~~~a~~Lr~lL~~~~~v~~~Ga~d~~~A~~~ 80 (418)
T d1f61a_ 1 ASVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQ 80 (418)
T ss_dssp CCCTTCCCCHHHHHHHHHHCGGGTTCCCSSCHHHHHHTSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
T ss_conf 98456504599999998629882778799899999986688775425789999999999836997884144778999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~kaGf~aiY~SG~~vaa~~s~s~~g~PD~gl~~~~ev~~~v~~I~~~~~~~d~~~~~~~~~~~~~~~~PIIaDaDtGfG~ 160 (418)
T d1f61a_ 81 VRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGG 160 (418)
T ss_dssp HHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTCSSS
T ss_pred HHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
T ss_conf 98199889854276523454556886665555167899999999988788999998740466433567768753333453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~nv~rtvk~~i~AGaAgihiEDQ~~~~KkCGH~~GK~lvp~~e~~~ki~Aa~~a~d~~~~~~~iiARTDA~~a~~i~s~ 240 (418)
T d1f61a_ 161 ALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSD 240 (418)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
T ss_conf 78999999999983786899734677776556667766688999999999998766437998489997160232355333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~d~~D~~~i~g~rt~eG~y~~~~g~e~AI~Ra~aya~~gd~i~~e~~~~~~ee~~~f~~~v~~~~~~~~l~~~~sPsf~w 320 (418)
T d1f61a_ 241 VDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNW 320 (418)
T ss_dssp CSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCSSSCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
T ss_conf 43233444455457664001457789999999963543671885057899999999986248873332035676567770
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~eL~~~Gy~~~~i~la~~~a~~~a~~~la~~~~~~Gm~ay~elQ~re~~~~~~Gy~~~khQ~~vG~~ 400 (418)
T d1f61a_ 321 KKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAG 400 (418)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCCTTSHHHHTTHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
T ss_conf 11467766543399999609629996138999999999999999986676277877658888874698556401330532
Q ss_pred -----------------C
Q ss_conf -----------------6
Q 001706 633 -----------------S 633 (1024)
Q Consensus 633 -----------------~ 633 (1024)
=
T Consensus 401 y~D~~~~~~~~~~s~~a~ 418 (418)
T d1f61a_ 401 YFDRIATTVDPNSSTTAL 418 (418)
T ss_dssp HHHHHHHHHCTTSCCCCC
T ss_pred HHHHHHHHHCCCHHHHCC
T ss_conf 788889884787053139
|
| >d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]
Probab=100.00 E-value=0 Score=31566.03 Aligned_cols=1 Identities=100% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~ 80 (418)
T d2r5ea1 1 KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS 80 (418)
T ss_dssp CCCCCGGGTTCCCCHHHHHHHHHHHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98643464179988999999986589988716889999889999999999983899667678998788999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (418)
T d2r5ea1 81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLD 160 (418)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECC
T ss_pred HHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 98599999641589917973321100222013333200122345004678987498699997214556663055666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~ 240 (418)
T d2r5ea1 161 NNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 88776654114441241786865443331888777753442178122102102120157876531003655543145665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d2r5ea1 241 SAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASF 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57754268876445323431133444211222333345620210122233222334453256788888988764667766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~ 400 (418)
T d2r5ea1 321 LAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK 400 (418)
T ss_dssp HHHTTCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCC
T ss_conf 76428701379812499787223565111012034467899999999878999968256478877667899899995699
Q ss_pred -----------------C
Q ss_conf -----------------6
Q 001706 633 -----------------S 633 (1024)
Q Consensus 633 -----------------~ 633 (1024)
+
T Consensus 401 ~e~l~~a~~rl~~~lg~~ 418 (418)
T d2r5ea1 401 DENLQKAAEILRKWKGSS 418 (418)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999987359
|
| >d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31564.18 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~r~~~~~~~~~~~~~~~~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~ 80 (418)
T d1w7la_ 1 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80 (418)
T ss_dssp CCSCGGGTTCCCCTHHHHHHHHHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97670002799899999999747899788889889998899999999999857974468899867899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d 160 (418)
T d1w7la_ 81 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 160 (418)
T ss_dssp HTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECC
T ss_pred HCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 58998810115642585799999998622677615304556600689999749874014566542223443224575300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~ 240 (418)
T d1w7la_ 161 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEC
T ss_conf 55430223566531112676776564333889999999998629871155666775158989989777165445552001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d1w7la_ 241 SAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRS 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 56764268877434322320255553023322322232025677887765222333344332223102333200012345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~ 400 (418)
T d1w7la_ 321 LQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK 400 (418)
T ss_dssp HHTTTCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECC
T ss_conf 66438812379820499887710002320101345553589999999997999997454426787667779979999738
Q ss_pred -----------------C
Q ss_conf -----------------6
Q 001706 633 -----------------S 633 (1024)
Q Consensus 633 -----------------~ 633 (1024)
.
T Consensus 401 ~~~~l~~a~~rl~~~~~~ 418 (418)
T d1w7la_ 401 DEATLQAMDEKLRKWKVE 418 (418)
T ss_dssp CHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998667
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31500.48 Aligned_cols=1 Identities=0% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~ 80 (417)
T d1pv7a_ 1 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWII 80 (417)
T ss_dssp CHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 98665715899999999999999999999999999802999999999999999999999999999999817539999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (417)
T d1pv7a_ 81 TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGI 160 (417)
T ss_dssp HHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999988763014678889999877650122233202211222344113456777788765403554455300012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (417)
T d1pv7a_ 161 MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD 240 (417)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 33456653211003489999999999842332102322002320233222211001222222110246688999887641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T d1pv7a_ 241 QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKT 320 (417)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 22222222223333210000011222223322221024444200122210003657888886520113322111457899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l 400 (417)
T d1pv7a_ 321 LHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL 400 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998798489999999999999999999999999999997989999999999999999999753
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~r~~~~e~a 417 (417)
T d1pv7a_ 401 SGPGPLSLLRRQVNEVA 417 (417)
T ss_dssp CCSSCTTHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHCCCC
T ss_conf 27785436675323379
|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31496.47 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 P~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r~r~i~Y~lsl~E~~vpY~~~~p~~ 80 (417)
T d1w6ga1 1 PLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIR 80 (417)
T ss_dssp SCCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred CCCCCCCCCEEECCCCCCEEECCCCEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCHH
T ss_conf 98888998305689999879778988997687899970787661999999818984766899801236798788998356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L 160 (417)
T d1w6ga1 81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM 160 (417)
T ss_dssp TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEEEEE
T ss_conf 21016733452633412346558999866768237872688998861653788624788227888704781368750069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG~~Nsv~ 240 (417)
T d1w6ga1 161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVE 240 (417)
T ss_dssp EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred EEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCEEE
T ss_conf 99999973202089999994696799999988999871347888986437646756555321357774355479976699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~~s~~~ 320 (417)
T d1w6ga1 241 EEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIA 320 (417)
T ss_dssp EEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHH
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 99617842797665454789999988762563220266686489998799858899944599855887764579876011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~gf~L 400 (417)
T d1w6ga1 321 RRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKL 400 (417)
T ss_dssp HHTGGGGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEE
T ss_pred HCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEE
T ss_conf 02322106378856877662677777447789998467510899423786799995784248985447997620577999
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
|
T Consensus 401 ~P~nFF~~nPald~p~s 417 (417)
T d1w6ga1 401 RPEGFFDRSPVLDVPAN 417 (417)
T ss_dssp EESSCSSSCTTTTCCCC
T ss_pred ECCCCCCCCCCCCCCCC
T ss_conf 87877899986678999
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31495.72 Aligned_cols=1 Identities=0% Similarity=1.002 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~PL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 80 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK 80 (417)
T ss_dssp CCCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHH
T ss_conf 99898999899847704899999999983993999898999871210488898985188897089984999769398899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~nP~lI~~sisgfG~~GP~~~~~~~D~~~qA~sG~~~~~g~~~~~P 160 (417)
T d1q7ea_ 81 EVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP 160 (417)
T ss_dssp HHHHHHHHHCSEEEECCCC-------CCHHHHHHHCTTCEEEEEESSCTTSTTTTSCCCHHHHHHHTTHHHHSSCTTSCC
T ss_pred HHHHHHHHCCCCCEECCCCCCHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999984086407546887175528889999866878788763222454344565334543333223201126656798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (417)
T d1q7ea_ 161 LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP 240 (417)
T ss_dssp CCCSSCTTTHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTSTTTTTSCCCSSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 52224431679999999999999999985499739997789999986689998554320002222244344655677788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~~~~~~~~~p~~~~~~~~~~t~dg~i~~~~~~~~~w~~l~~~lg~~dl~~d~~~~~~~~r~~~~~~l~~~i~~~~~~~t 320 (417)
T d1q7ea_ 241 RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTID 320 (417)
T ss_dssp CCTTCCSSSSCEEEEECTTTTTCTTCEEEEECCGGGHHHHHHHTTCGGGGTCTTTSSHHHHGGGHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66656888886430133015517983999732312556899985885101332000000122119999877765211333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~e~~~~l~~~~ip~~pV~~~~e~~~dpq~~~r~~~~~~~~p~~g~~~~~g~p~~~s~~~~~~~~aP~lGeht~eIL~el 400 (417)
T d1q7ea_ 321 KHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQEL 400 (417)
T ss_dssp HHHHHHHHGGGTCCEEECCCHHHHHHCHHHHHTTSEEEEEETTTEEEEEECCSSCCSSCCCCCCCCCCTTTTHHHHHHHT
T ss_pred CCHHEEEEECCCEEEEECCCHHHHHHCHHHHHCCCEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 10110123237702674488999976989897299999666998823644788604899999999999984599999986
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
.
T Consensus 401 G~s~~~I~~L~~~gvI~ 417 (417)
T d1q7ea_ 401 GYSDDEIAAMKQNHAIE 417 (417)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHCCCCC
T ss_conf 99999999999781939
|
| >d3bona1 d.92.1.7 (A:3-419) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]
Probab=100.00 E-value=0 Score=31494.66 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~nnnFNyndPVnn~~Ily~~~p~~~~~~~~KAF~I~~nIWIiPER~~~~~~~~~d~~~p~~~~~~~~~yYDpnyLsTD~ 80 (417)
T d3bona1 1 FVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDN 80 (417)
T ss_dssp CCSCCCCTTSCCCSSSEEEEECC--CCCCCEEEEEEETTEEEEEEECCSSCTTCCSCSCC----CCSSCCCCTTTTCSHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCH
T ss_conf 96677777898899718999567788776034477426768830343567888666689701025876412753245613
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 EKD~FLk~~IKLf~RINsn~~G~~LL~~I~~aiPflG~s~~~~~~~~~~~~svni~~~~g~~~~~~~NlvIfGPgpnI~e 160 (417)
T d3bona1 81 EKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQ 160 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHCCCCCBCCSSTTEEBCCGGGEEEEECTTSCEEEEECSEEEEECCSSTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEECCCCCCCC
T ss_conf 78899999999999854857899999999726877789988711256641157764489854554215899889863145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 n~~~~~~~~~~n~s~~GfGsi~~i~FsPe~~~~f~~~~~~~~~~~~~~~~F~~DPAl~L~heLIhsLh~LYGik~~~~~~ 240 (417)
T d3bona1 161 FECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRV 240 (417)
T ss_dssp CEEECCCCSSCCTTTSSCCCCEEEECCTTEEEEECSSHHHHTCTTSCCCCEECCHHHHHHHHHHHHHHHHTTCCCCTTCE
T ss_pred CCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 54323034457733047650589997764377604533455555545343542889999999999988760756788741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~i~~eEl~tFGG~D~~iI~~~~~~~~~~k~l~~yk~Ia~rl~kvn~~~~~~~~l~~yK~~F~~KY~ 320 (417)
T d3bona1 241 FKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYL 320 (417)
T ss_dssp EECCSCHHHHHTTCEEEHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHCCEESSSSSCHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 32121122343246645777765169781105846788899999999999999987525678885236999999988744
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 l~~d~~g~~~vn~~kF~~~yk~L~~~fTe~~~a~~fkvk~Rk~Y~~~~~~~~~~nlldd~iYtI~eGFNi~~~nl~~~~~ 400 (417)
T d3bona1 321 LSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFN 400 (417)
T ss_dssp CEECTTCCEECCHHHHHHHHHHHHHTSCHHHHHHHHTCCCCSCSSSCCCEEEECCCSSTTTCBTTTBTSCTTSTTSSTTG
T ss_pred CCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCCEECCCCCCCCCCCCCCCCC
T ss_conf 65278885895389999999999711588888766501434420000244100144676531314552146665345557
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
-
T Consensus 401 GQN~~iN~~~~~~~~~~ 417 (417)
T d3bona1 401 GQNTEINNMNFTKLKNF 417 (417)
T ss_dssp GGBTTTTGGGCEEEEEC
T ss_pred CCCHHHCHHHHHHHCCC
T ss_conf 76522153442442069
|
| >d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=31493.24 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~n~~ti~d~~d~~gK~VllRvD~NvPi~~g~i~dd~RI~~~~pTI~~l~~~~a~kvil~sH~GRP~g~~~~~~SL~ 80 (417)
T d1ltka_ 1 HHHLGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLK 80 (417)
T ss_dssp CCCSSSCCBSSSCCCCTTCEEEEEECCCCCEETTEESCTHHHHHTHHHHHHHHTTCCSEEEEECCCSCCTTSCCGGGCSH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH
T ss_conf 97444675023111258998999943477654993896889999999999999879985999847999999889875879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~IlLLENvRF~~eE~~~~~~~~~~~~~~~~~n~~~f~k~LA~laD 160 (417)
T d1ltka_ 81 PVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLAD 160 (417)
T ss_dssp HHHHHHHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCGGGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999868465556553202245430247865378740021021012356432221000122307999999860385
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 vyVNDAF~~aHR~haS~vgi~~~~~~aG~L~ekEl~~L~~~l~~~~kP~vaIlGGaKvsdKi~vi~~L~~k~D~iiigG~ 240 (417)
T d1ltka_ 161 VFINDAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGG 240 (417)
T ss_dssp EEEEECTTSCSSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESS
T ss_pred EEEECCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEHH
T ss_conf 89963531231047632312120112368999999999999854566736998567744269999878865111663036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 mantfL~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~ 320 (417)
T d1ltka_ 241 MAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPK 320 (417)
T ss_dssp HHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEEEEETTTCCCTTCEEEEECHH
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCH
T ss_conf 67889886148766753103567899999999998639961002322430234567643312333567753444411511
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 Ti~~~~~~I~~aktI~WNGP~GvfE~~~F~~GT~~l~~~i~~~t~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~ 400 (417)
T d1ltka_ 321 SIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGAS 400 (417)
T ss_dssp HHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECCSTTHHHHHHHTCGGGSSEECCCSHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHH
T ss_conf 12679998646877999898344446624278999999999883179979995789999999639746880897578999
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
+
T Consensus 401 Le~L~G~~LPgieaL~~ 417 (417)
T d1ltka_ 401 LELLEGKELPGVLALSN 417 (417)
T ss_dssp HHHHTTCCCHHHHTSCC
T ss_pred HHHHCCCCCCCEECCCC
T ss_conf 99987999762001249
|
| >d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4 [TaxId: 10843]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Microviridae-like VP domain: Microvirus capsid proteins species: Bacteriophage G4 [TaxId: 10843]
Probab=100.00 E-value=0 Score=31493.03 Aligned_cols=1 Identities=100% Similarity=1.766 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~DlsH~~~~t~~~G~L~PI~~~eVLPGDtf~l~~~~f~Rlat~~~pvmdn~~~d~ffFfVP~RlvW~dnWekF~g~~~ 80 (417)
T d1gff1_ 1 VPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECDMVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGV 80 (417)
T ss_dssp CEECCCEEEEEEECSSBCEEEEEEEECTTCEEEEEEEEEEEECCBSSSCCSCEEEEEEEEEEESHHHHTHHHHHHHHHGG
T ss_pred CCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCHHHHHEEEEEEEEECCEEEEEHHHHHHHHCCCC
T ss_conf 98554500110455650678775142589755644123201266532211210667899852411354125899756878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 np~~vP~vt~~~g~~~~dYlG~P~~~~~~~~~l~~rAYn~I~NewfRd~nl~ds~~v~~~dgpdd~a~y~lr~~~~~dyf 160 (417)
T d1gff1_ 81 NASPLPPVTCSSGWDSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPSEDYKWGVRVANLKSIW 160 (417)
T ss_dssp GCCCCCCEECCSSTTSSGGGSSCCCTTSEECHHHHHHHHHHHHHHTSCTTSCCCCCSSGGGSCTTTTTTCCBCBCCCCST
T ss_pred CCCCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 98878706458874387618888888732102478999999997713734355335147778875102222201101310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Ts~LP~~~~~s~~~g~~~~s~d~~gL~~a~a~ti~~lr~a~flQr~~Ei~argG~r~~~~v~~~d~rlqr~eylggg~~~ 240 (417)
T d1gff1_ 161 TAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKEFGGHTSYDGDNRPLLLMRSEFWASGYDV 240 (417)
T ss_dssp TSCCCTTCCSCCCCCCCSSCCCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHTTTCCCCTTTTTCCEEEEEEEEEECCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 13589998877556888664470435666667899999999999999999734983554576827765214765366422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~Tdqt~lg~~sg~g~~~~~~~v~~~~~~EHG~I~~L~~vr~~~t~~q~~~~~~~~~d~~~p~fa~Dp~l~geqP~~n~e 320 (417)
T d1gff1_ 241 DGTDQSSLGQFSGRVQQTFNHKVPRFYVPEHGVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVS 320 (417)
T ss_dssp ECCSTTTTTCEEEECEEEEEEEEEEEECCSSEEEEEEEEEECCCCBTTBCCHHHHSSSCCHHHHSCCHHHHTTSCCEEEE
T ss_pred CCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCCCC
T ss_conf 46653112331032487215633553245541899999853786101045541562001452330680110347742323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 i~~~~~s~d~~v~Gy~~r~~~YR~~p~~V~g~f~sLd~W~~~~~~psl~~~~~v~v~~~~~D~~f~s~~~~q~~~~~~fn 400 (417)
T d1gff1_ 321 LKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTDLKDRVLVNTNNYDEIFQSMQLAHWNMQTKFN 400 (417)
T ss_dssp TTTTBSSCCTTCEEEECTTGGGSCCCCCCCTTTTTCTTCCSBCSCCCSSTGGGTBCCGGGGGGGBSSCSSCSEEEEEEEE
T ss_pred HHHHCCCCCCCEEECCHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCHHHCEEECCCCCCHHHHCCCHHHHHEEEEEE
T ss_conf 54404778864014012045552472010200004564132114889984460152687503666137505500114775
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
+
T Consensus 401 ~~v~R~mPt~~~~i~~~ 417 (417)
T d1gff1_ 401 INVYRHMPTTRDSIMTS 417 (417)
T ss_dssp EEEECCCCCHHHHSCCC
T ss_pred EEEEECCCCCCCCCCCC
T ss_conf 67860489854332469
|
| >d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: YbiU-like domain: Hypothetical protein YbiU species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31492.08 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~p~dl~~~i~~~K~~Lr~~~~~~~~~f~~l~~~i~~ev~eI~~l~~~G~~iIPeI~F~dI~~~~~~~~~~~~I 80 (417)
T d2csga1 1 TPFTHETLPADPKAAIRQMKQALRAQIGDVQAVFDRLSATIAARVAEINDLKAQGQPVWPIIPFSELAMGNISDATRAEV 80 (417)
T ss_dssp CTTCCSSCCSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCBCCHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHH
T ss_conf 99876678898389999999999965678999999999999999999999996199985065589952678998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 krrG~vVIRnV~p~e~a~~w~~~l~~Yle~n~~~~~~~~~~d~~f~~lp~~~pqiy~lyws~~q~~aR~~p~~~~~~~~l 160 (417)
T d2csga1 81 KRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQSFL 160 (417)
T ss_dssp HHHSEEEETTSSCHHHHHHHHHHHHHHHHHTTHHHHCCCCCCCTTTTSSSCCCSSCCCCCBHHHHHHHHCHHHHHHHHHH
T ss_pred HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHH
T ss_conf 86188998887899999999999999998286420036864310012355677744242689999874495899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~lw~~~~~~~~~~~~~~~l~y~DR~r~r~Pg~~~~~l~pH~D~Gs~erW~d~~y~~~y~~if~g~we~ydPw~~~~R~~ 240 (417)
T d2csga1 161 NRLWQVEHDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFASVFNGNVEQYDPWNAAHRTD 240 (417)
T ss_dssp HTTSBCCSSSSCSSEEEEECCCCCCEECCCTTCCBCCEEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGG
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 85202368866412577743045503137999876786755689850103563125688887558842279876423320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~l~~~~~~cs~FR~fQGwlaLs~~~p~dGtL~v~P~~~~~ay~llrpf~~d~~~~~~~g~~pg~~~~~~~~~h~~l~ 320 (417)
T d2csga1 241 VEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPISEQWHPLLM 320 (417)
T ss_dssp CCCCCCTTCCCCCSCCSEEEEEESSCBCTTSSCEEECCCGGGHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH
T ss_pred CHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 00034478765414778887752366788887379963403577887240125556655677776655545633315650
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~v~ip~~~pGD~V~Wh~d~iH~v~~~~~g~~~s~V~Yi~~~P~~~~N~~yl~~qr~aF~~g~~ppdFp~~~~E~~~~g 400 (417)
T d2csga1 321 AALTSIPPLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYARKVKAALETGASPGDFPREDYETTWEG 400 (417)
T ss_dssp TTCEECCCBCTTCEEEEETTCCEEECCBSSCSSCCCEEECCBCEESHHHHHHHHHHHHHHHHTCCCTTSCSCCGGGSCSS
T ss_pred CCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 86155245688887887078753446678999865389842788846559999999999975999877789987543356
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
=
T Consensus 401 r~~~~~ls~~G~r~mGL 417 (417)
T d2csga1 401 RFTLRDLNIHGKRALGI 417 (417)
T ss_dssp BCCGGGCCHHHHHHTTC
T ss_pred CCCHHHCCHHHHHHCCC
T ss_conf 88946528999986289
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31487.27 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~v~VmlPLd~v~~~~~~~~~~~~L~~LK~aGV~gV~vdVwWGivE~~~Pg~Ydws~yd~l~~mv~~~GL 80 (417)
T d1vema2 1 AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGM 80 (417)
T ss_dssp CGGGCCCCTTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98887788995389986622245667889999999999983997899933424310589983570899999999998698
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Ki~vvmsfH~cGgnvgd~~ti~lP~Wv~e~~~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I 160 (417)
T d1vema2 81 KMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVI 160 (417)
T ss_dssp EEEEEEECSCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGB
T ss_pred EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 28999874235787788615688888870554888167768898883703766698701004167887999987740047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~ei~vglGp~GELRYPsyp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln~aWG~~~~~~~~~~~p~~~~ff 240 (417)
T d1vema2 161 AKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQF 240 (417)
T ss_dssp CCEEECCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTCCCSSGGGCCSCSCHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99986057420003788810015657998866578999999999999860665632235228999754576778888766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~g~~s~YG~fFL~WYs~~L~~Hgdrvl~~A~~~F~~~~~v~l~~Kv~giHWwy~~~t~shaaElTAGydgY~~i~~~~ 320 (417)
T d1vema2 241 LMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGYNDYSHLLDAF 320 (417)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTTCSSSTTTTHHHHTCSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 67983533335589999999999999999999985189877279999465033689999874154405855779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~r~~~~l~ftc~em~d~~~~~~~s~Pe~Lv~qv~~aa~~~gv~~~gENAl~~~d~~~~~~i~~~~~~~~~~~fTylRm~~ 400 (417)
T d1vema2 321 KSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLANEKGIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQD 400 (417)
T ss_dssp HHHTCEEEESCCSCCCCCCTTTCCCHHHHHHHHHHHHHHHTCCEEEECSSCCCSHHHHHHHHHHHHHTTCSEEEESCHHH
T ss_pred HHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
T ss_conf 86697598761244568899655797999999999999829936510053014867999999971127876157975656
Q ss_pred ----------------C
Q ss_conf ----------------6
Q 001706 633 ----------------S 633 (1024)
Q Consensus 633 ----------------~ 633 (1024)
-
T Consensus 401 ~l~~~~n~~~F~~fv~~ 417 (417)
T d1vema2 401 VMYNNSLMGKFKDLLGV 417 (417)
T ss_dssp HHTCHHHHHHHHHHTSC
T ss_pred HHCCCCCHHHHHHHHCC
T ss_conf 55796428889887439
|
| >d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=31423.82 Aligned_cols=1 Identities=0% Similarity=-2.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~p~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~~~~~~~~p~~~~~~~e~ll~eA~~Fi~q~y~e~~~~~~~ 80 (416)
T d1q2oa_ 1 GPKFPRVKNWELGSITYDTLCAQSQQDGPCTPRRCLGSLVLPRKLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQ 80 (416)
T ss_dssp CCSSCEEEBTTTCCEEECCGGGGCCBCCSCCSSCBCTTCSCC-----------CCHHHHHHHHHHHHHHHHHHTTCTTSH
T ss_pred CCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99745655404687563324442678899876733560025644466888999998999999999999999862756778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGR~~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~I 160 (416)
T d1q2oa_ 81 AHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNRGNL 160 (416)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999997464620899999887899870455222300216572665678999899999999999997079987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 r~~ITVFp~~~~g~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLViq~~g~~p~~fe 240 (416)
T d1q2oa_ 161 RSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEAPELFV 240 (416)
T ss_dssp CCEEEECCCCBTTBCCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHHTTCCCCCSSSCBCCEEEECTTSCCEEEC
T ss_pred CEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
T ss_conf 63389737988999986675488786626578998764684216999999976888999987710289997899972673
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 iP~elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRnl~D~~RYN~L~~VA~~mG 320 (416)
T d1q2oa_ 241 LPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFSAAPFSGWYMSTEIGTRDLCDPHRYNILEDVAVCMD 320 (416)
T ss_dssp CCGGGSCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHTT
T ss_pred CCHHHEEEECCCCCCCCHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 88778357346798983066638857605211255000077844245645330022355430455566666899999848
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 LDT~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~S~s~TpvfH~~~ 400 (416)
T d1q2oa_ 321 LDTRTTSSLWKDKAAVEINLAVLHSFQLAKVTIVDHHAATVSFMKHLDNEQKARGGCPADWAWIVPPISGSLTPVFHQEM 400 (416)
T ss_dssp CCTTCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCBCCHHHHSCSSSGGGSGGGGBCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHH
T ss_conf 78889740467789999999999899877964704068899999999999983899998852777888754541676665
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
=
T Consensus 401 ~n~~l~P~f~yq~~~w 416 (416)
T d1q2oa_ 401 VNYILSPAFRYQPDPW 416 (416)
T ss_dssp BBCBCSSEEECCCCCC
T ss_pred HHCCCCCCCCCCCCCC
T ss_conf 5034588865589999
|
| >d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31421.94 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 l~~~~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r 80 (416)
T d1dfoa_ 1 LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR 80 (416)
T ss_dssp CCTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98658845519999999999999987690586476657899999855741475658899975447773099999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~lF~a~~anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~ 160 (416)
T d1dfoa_ 81 AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ 160 (416)
T ss_dssp HHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99983998205601557557999999863898866421465433335555544467237999646687667447899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrggiI~~ 240 (416)
T d1dfoa_ 161 AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA 240 (416)
T ss_dssp HHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSCEEEEE
T ss_pred HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEE
T ss_conf 99836564873432255655879999998751715872212000003244347860000046521001046878638984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlv 320 (416)
T d1dfoa_ 241 KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV 320 (416)
T ss_dssp SSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
T ss_conf 23117689998766086534685177898988779987097889999999999999999998389443369988753688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~~~~~~~~~ 400 (416)
T d1dfoa_ 321 DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER 400 (416)
T ss_dssp ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 73045898999999999729688678588999988889821767789984899879999999999999972786799999
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
+
T Consensus 401 ir~~V~~l~~~fPly~ 416 (416)
T d1dfoa_ 401 IKGKVLDICARYPVYA 416 (416)
T ss_dssp HHHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHCCCCCC
T ss_conf 9999999998089989
|
| >d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: L-rhamnose isomerase domain: L-rhamnose isomerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31419.58 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 s~i~~~ye~a~e~ya~~GID~e~al~~L~~~~Is~h~WqGddv~gFe~~~g~ltGGi~~tGnyPG~aR~~~E~~~D~~~~ 80 (416)
T d1d8wa_ 1 TQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQA 80 (416)
T ss_dssp CHHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCEEEEGGGGTTTCCCCC--------------CSCCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 91679999999999983988999999985484443036678765534677767776021278899889989999889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~Lipg~~~vnLH~~y~~~~~~vdrd~i~p~hf~~w~~wAk~~glglDfNpt~Fshp~~~~g~sLshpd~~iR~~wI~H~ 160 (416)
T d1d8wa_ 81 MRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHC 160 (416)
T ss_dssp HHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEEEECCCSSSGGGTTSCSTTCSSHHHHHHHHHHH
T ss_pred HHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98568998400033320258866412258574899999999749774757655578442257762588889999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~c~~I~~~~G~~~g~~~v~niWi~DG~k~~~~d~~~~R~Rl~eSLdeI~a~~~d~~~~ld~vE~K~Fg~g~esy~vgs~ 240 (416)
T d1d8wa_ 161 KASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSN 240 (416)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEECCCCEESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEECCSCBTTBCSEESSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEEECCCH
T ss_conf 99999999986300776204776577676888683159999999999998715876650454230125565035763738
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 df~~~yal~~~a~~llD~GH~hPtenI~dkisalll~~~~~~lH~sr~~rwDsDhvvi~~del~~I~~ElVr~~~ld~v~ 320 (416)
T d1d8wa_ 241 EFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVH 320 (416)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCTTCCHHHHHHHHTTTSSCEEEEECBCSSSSCCBCCCSSHHHHHHHHHHHHTTGGGTEE
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 88998763489679986798787665999999999727542576388856677612036489999999999645544422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~LD~fdasinrI~a~v~g~rn~qka~l~ALL~p~~~L~~~q~~gD~t~rla~~Ee~K~~P~~avW~~~c~r~~vp~~~~ 400 (416)
T d1d8wa_ 321 IGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAPGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSE 400 (416)
T ss_dssp EEECCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHHHHHTTSCHHHHHHHHHHHTTCCCSTT
T ss_pred ECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 30023422466199999999999999999976899999999986799999999999851981889999999739998768
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
.
T Consensus 401 ~~~~v~~Ye~~v~~kR 416 (416)
T d1d8wa_ 401 WLESVRAYEKEILSRR 416 (416)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 8999999999885349
|
| >d2vnud4 b.40.4.16 (D:495-910) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exosome complex exonuclease RRP44 species: Saccharomyces cerevisiae [TaxId: 4932]
Probab=100.00 E-value=0 Score=31415.33 Aligned_cols=1 Identities=0% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisi~~~~~g~~~l~VHIADva 80 (416)
T d2vnud4 1 FSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVT 80 (416)
T ss_dssp CCHHHHTTSCTTGGGCCCCSSTTCHHHHHHCGGGGGSEECTTSCCEEEESSSCCCCCEEEEEEECTTSCEEEEEEEECHH
T ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHH
T ss_conf 98789964432368643764453122115752323771177898799769999546565899995899599999983578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~v~~~s~Ld~~A~~R~~t~Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~~~~~g~i~~~~~~~s~I~~~~~ltY 160 (416)
T d2vnud4 81 HFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSY 160 (416)
T ss_dssp HHSCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHTTTSSCCBTSEEEEEEEEEEECTTCCEEEEEEEEEEEEBSEEEEH
T ss_pred HHHCCCCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEHHHHCCCCCCCH
T ss_conf 86299998999999848037589971144788886545205698202467765540210144420332012033322321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~ev~~~l~~~~~~~~~~~~l~~L~~~a~~l~~~R~~~g~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~s~~lVeE~Mi~A 240 (416)
T d2vnud4 161 EQAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLA 240 (416)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCEEEEECSSSSCEEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 66788751354321000678999999999999998568754578742799423335565431122242014078776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 N~~vA~~l~~~~~~~~~~R~h~~p~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~~~~~ 320 (416)
T d2vnud4 241 NISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMM 320 (416)
T ss_dssp HHHHHHHHHHHCTTTCEEEEBCCCCGGGGHHHHHHHHHHHSCCCCCSCHHHHHHHHHTCCBTTBTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 08999999984788876400079997999999999997012676865225578999987475672699999999887788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~a~~~~~~~~s~~~~~H~gLgl~~YthfTSPIRRY~DLv~hrqL~a~l~~~~~~~~~~~~e~l~~i~~~~~~~e~~a~~a 400 (416)
T d2vnud4 321 AAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFA 400 (416)
T ss_dssp CCEEEEGGGSCGGGGCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHTTSSCCCGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87763015579976273765722015168677637899999999999737999977443999999999999999999999
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
.
T Consensus 401 er~~~~~~~~~~lk~~ 416 (416)
T d2vnud4 401 GRASIEYYVGQVMRNN 416 (416)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999997578
|
| >d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31413.53 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~~~~~v~~~~~~w~~pRw~~ikR~Yta~dV~~lRgs~~~~~~~a~~~A~kL~~lL~~~~~~~~v~~lGa~d~~~A~~~~ 80 (416)
T d1igwa_ 1 KTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQA 80 (416)
T ss_dssp CCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
T ss_conf 96799999999986696515689998999999966985876837899999999998604445706547757799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 kaGf~aiYvSG~~~sA~~~~~~~~~PD~gl~~~~~v~~~~~~I~~a~~~~d~~~~~~~~~~~~~~~~d~~lPIIADaDtG 160 (416)
T d1igwa_ 81 KAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAG 160 (416)
T ss_dssp HHTCCCEEECHHHHHHHSCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTCTTCCCCCCCEEEECTTC
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 80998899646100165555678877765462889999999999988889999875200235444444310157742245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 fG~~~nv~r~vk~~i~AGaagihiEDQ~~~~KkCGHl~gK~lv~~~e~~~ki~AA~~a~d~~~~~~~IiARTDA~~a~li 240 (416)
T d1igwa_ 161 FGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLCADVTGVPTLLVARTDADAADLI 240 (416)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEESBCGGGCCCC----CEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
T ss_conf 67658999999999967871897226766430100148974678999999999999877427998279986230555444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~sd~d~~D~~fi~g~Rt~eG~yr~~~G~d~aI~R~~aya~gADli~~Et~~~~~e~a~~fa~~v~~~~p~~~l~yn~SPs 320 (416)
T d1igwa_ 241 TSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPS 320 (416)
T ss_dssp SCCCCGGGGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC--
T ss_pred HCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCC
T ss_conf 20131115672057647343522247859999999984322667753168998999999998607876567623478887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 fnw~~~~~~~~~~~~~~eL~~lGy~~~~~~la~~ha~~~a~~~l~~~~~~~~gm~ayv~~~Q~~E~~~~~~g~~~~~hQ~ 400 (416)
T d1igwa_ 321 FNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQ 400 (416)
T ss_dssp --------------HHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTHHHHHHHHTTTCCTTSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 67201235567999999999659888996768999999999999999863498899999875898887744863020886
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
.
T Consensus 401 ~~G~~y~D~~~~~~~g 416 (416)
T d1igwa_ 401 EVGTGYFDKVTTIIQG 416 (416)
T ss_dssp HTTHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHCC
T ss_conf 7542489999987169
|
| >d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: Isocitrate dehydrogenase, ICDH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31409.95 Aligned_cols=1 Identities=0% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~IavipGDGIGPEV~~ealkVL~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~ 80 (416)
T d1pb1a_ 1 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQ 80 (416)
T ss_dssp CCCCCCCCSSCBCCEEETTEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCSHHHHHHHCT
T ss_pred CCCCCCCCCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
T ss_conf 99752279998679977998818999889998988624999999999999999874268985589998235799998499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~lp~~t~~~~~~~da~l~Gav~~P~~~~~~~~~l~lR~~ldlyanvRP~r~~pg~~spl~~~~~iD~vIvREnteG~Y 160 (416)
T d1pb1a_ 81 DVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 (416)
T ss_dssp TCSSCHHHHHHHHHHSEEEECCCCCCSSSCCCCHHHHHHHHTTCCEEEEEEECCTTCCCSSSCGGGCEEEEEEECSSGGG
T ss_pred CCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 77799999999985498952886699988876667889987486474132002678886434556446599861134422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~t~~~~~Ri~r~AF~~A~~~~r~~vt~v~Kanvl~~~~gl 240 (416)
T d1pb1a_ 161 AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA 240 (416)
T ss_dssp GCCEECTTCHHHHHHHHHHHHTSCCCCCSCCSSCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
T ss_conf 45033456520688998766530530113653036765402122228999999999996699968999789765401678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 f~~~~~e~a~e~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~vDa~~~~lv~~P~~fdViv~~NlfGDIlSDlaa~l~Ggl 320 (416)
T d1pb1a_ 241 FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGI 320 (416)
T ss_dssp HHHHHHHHHHHHHCCEECTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCC
T ss_conf 99999999987631223344431101046676334289999999999985210467789613578777777888862376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 Gl~pSanig~~~a~fEp~HGSAPdiaGk~iANP~a~Ils~amML~~lg~~~~A~~i~~Av~~~l~~g~~T~Dl~~~~~~g 400 (416)
T d1pb1a_ 321 GIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGA 400 (416)
T ss_dssp TTCCCEEECSSCEEEECCSCCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTEECHHHHTTSSSC
T ss_pred CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 65445466877248877888615547999759299999999999987997899999999999997598124300046899
Q ss_pred ---------------C
Q ss_conf ---------------6
Q 001706 633 ---------------S 633 (1024)
Q Consensus 633 ---------------~ 633 (1024)
=
T Consensus 401 g~~~T~e~~daI~~~l 416 (416)
T d1pb1a_ 401 KLLKCSEFGDAIIENM 416 (416)
T ss_dssp EECCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHCC
T ss_conf 7727999999999659
|
| >d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria mellonella densovirus [TaxId: 37138]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Densovirinae-like VP domain: Densovirus capsid protein species: Galleria mellonella densovirus [TaxId: 37138]
Probab=100.00 E-value=0 Score=31342.60 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~IpRPi~~~~~~~~tyrK~HkFltfGlA~kvi~~~~t~~t~~~~~lTTsLaeiPw~~p~~YMnpsEF~lLP~Gs~v~e 80 (415)
T d1dnva_ 1 VYIIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVNRLLTTCLAEIPWQKLPLYMNQSEFDLLPPGSRVVE 80 (415)
T ss_dssp CCCCCCCCCCCCCEECCEEEEEEEEEECCCSCCCEECSSTTTCSBEEEEEEEEECCTTBGGGTCCHHHHHTCCTTCBCCC
T ss_pred CEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCEECCHHHHHHCCCCCEEEE
T ss_conf 93746676778886799965446776200121001456662023232210151160345525248878710689866889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~vkvv~rn~RiAFeTnSS~T~lATLNQnk~~~~A~GLN~~~~G~nr~~T~f~s~epMiPt~t~~~~y~~v~~~~~y~~~ 160 (415)
T d1dnva_ 81 CNVKVIFRTNRIAFETSSTVTKQATLNQISNVQTAIGLNKLGWGINRAFTAFQSDQPMIPTATTAPKYEPVTGDTGYRGM 160 (415)
T ss_dssp EEEEEEEEEEEECCCCSCTTSCCCCSCCCCEEEEESTHHHHTTCBCCCCCCCCSSSCCSCCCCCCCCSSEECSSSCEECH
T ss_pred EEEEEEEECCEEEEEECCCCCCCEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77899984670577755763101001022330110100302454213654556888745667786522355654689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~~~YG~~~~n~~~~~~~~~~P~hq~g~~~~L~nYfc~~~~~~~~tgGwpcl~~hi~e~da~~~~g~~vl~~~YkPk~g~ 240 (415)
T d1dnva_ 161 IADYYGADSTNDTAFGNAGNYPHHQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVTYKPKMGL 240 (415)
T ss_dssp HHHHHCCCSSCTTSSSSSSSCCGGGGCCEEECCCEEEECCBSSSSCCCCCCGGGGSEECCTTTTTTSBCCCCEECCSSCB
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf 99974766678633457777875672772110002577652046889836789998750256678857888852776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ik~P~~~~i~g~p~~~g~~sv~~n~~~~~~a~~~~~~~at~n~s~s~~nl~~~fp~~~~~iyt~IEKsQ~~~~G~~g~~~ 320 (415)
T d1dnva_ 241 IKSPLNYKIIGQPTVKGTISVGDNLVNMRGAVVTNPPEATQNVAESTHNLTRNFPADLFNIYSDIEKSQVLHKGPWGHEN 320 (415)
T ss_dssp CSCCCCBCCCCCTTBTTBBSCCCCCCCSCCSCEECCCCCBCSSSCBCCCCCEECCCCCCCCCSSCTTSSBSCCTTTCCCT
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCC
T ss_conf 46743354336655332120010044225765478255443321200204315884103023422133402126766668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 p~iQPSlHIGv~pVPaLTTa~l~~~~~~~~n~TDt~~ywdV~~~~~V~~~~Pt~~P~~~~~nv~~~~~~y~~nl~~~~~t 400 (415)
T d1dnva_ 321 PQIQPSVHIGIQAVPALTTGALLINSSPLNSWTDSMGYIDVMSSCTVMEAQPTHFPFSTEANTNPGNTIYRINLTPNSLT 400 (415)
T ss_dssp TCCCCCCCCCCEEEEECCBCCCCSSCCSCCCBCCEEEEEEEEEEECCEECCCCCSTTCCSCCBCTTTCCCCCCCSSCSSC
T ss_pred CCCCCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 75376246332204400113223378776762202589999988999855886544556678883303230446765556
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
+
T Consensus 401 s~~~GlY~~~~~~~~ 415 (415)
T d1dnva_ 401 SAFNGLYGNGATLGN 415 (415)
T ss_dssp SSSCCSSSCCSSCCC
T ss_pred CCCCCEEECCHHCCC
T ss_conf 521212641110379
|
| >d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31340.27 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~l~~l~~W~Fd~f~l~~~~~~~~~~~L~~~~~~lf~~~gl~~~f~i~~~~l~~Fl~~v~~~Y~~nPYHN 80 (415)
T d1so2a_ 1 LDLILVEEYDSLIEKMSNWNFPIFELVEKMGEKSGRILSQVMYTLFQDTGLLEIFKIPTQQFMNYFRALENGYRDIPYHN 80 (415)
T ss_dssp CCSHHHHHHHHHHHHHTSTTCCHHHHHHHHGGGGGGHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHTTSCSCSSSS
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 96110688999997224689882020155212334489999999999778377529899999999999998579998827
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~HA~dV~q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lE~~alliAA 160 (415)
T d1so2a_ 81 RIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDESYGCLSSNIPALELMALYVAA 160 (415)
T ss_dssp HHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCCTTCCCSSTTEECGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 89999999999999956554422111222233221111222332100122222333322201565408999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~HDvdHpG~nN~Flv~t~~pLA~lYnd~SVLEnhH~a~a~~lll~~~~~nil~~l~~~e~~~~r~lii~~ILATDm~~H 240 (415)
T d1so2a_ 161 AMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKH 240 (415)
T ss_dssp HHTTTTCCSCCHHHHHHTTCHHHHHTTTSSHHHHHHHHHHHHHHHTCGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 97226999966889987188789985898888999999999999648542143069999999999999999970464567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 f~~l~~f~~~~~~~~~~~~~~~~~~~r~lv~~~lik~ADIs~~~rp~~v~~~W~~~l~~EF~~QGd~E~~lglp~sp~~D 320 (415)
T d1so2a_ 241 FDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMD 320 (415)
T ss_dssp HHHHHHHHHHHTSSSCCCCCTTCHHHHHHHHHHHHHHHHTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999998740047767787888999999999998624744582889999999999999987799866999985668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 R~~~~~~k~QigFi~~iv~PLf~~l~~a~~~~~~~~~~~~~n~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (415)
T d1so2a_ 321 RSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWLEAEEDNDTESGDDEDGEELDTEDEEMENNLNPKPPRRKSRRRIF 400 (415)
T ss_dssp TTSCCHHHHHHHHHHHTHHHHHHHHHHTTCSCCEECC-------------------------------------CCSSEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 66564157899999998999999999983255999999998898778757664134400015554455776056677776
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
.
T Consensus 401 ~~~~~~l~en~~~w~ 415 (415)
T d1so2a_ 401 CQLMHHLTENHKIWK 415 (415)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 689999986255129
|
| >d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=31339.87 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~ktl~d~~~~~K~VlvRvD~NvPi~~g~I~d~~RI~~~~pTi~~ll~~~akvvl~SH~GRPkg~~~~~~~~~~~~~~~~ 80 (415)
T d16pka_ 1 EKKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
T ss_dssp CBCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCCT
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99741013878998999934675555995897388999999999999788979999058998987555322222223312
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~sL~~~a~~L~~~l~~~V~f~~~~~~~~~~i~~l~~g~i~LLEN~Rf~~eE~~~~~~~~~~fak~LA~laDiyVN 160 (415)
T d16pka_ 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVVSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYIS 160 (415)
T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHHHHTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 36833473889999998758674234431024456650577416874200024532322122138999998722868994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 DAFg~sHR~haS~~Gi~~~lps~~gg~L~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~~i~~l~~k~D~iligG~~a 240 (415)
T d16pka_ 161 DAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMA 240 (415)
T ss_dssp ECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHH
T ss_pred CCCCHHHCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH
T ss_conf 56202204675122200014224678999999999999970977551899853653437999998885365565322188
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ntfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d16pka_ 241 YTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEK 320 (415)
T ss_dssp HHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999809805544304443212666522321151678511203303101334443112222234543777787776667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~I~~AktI~wNGP~GvfE~~~F~~GT~~l~~~ia~~t~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~ 400 (415)
T d16pka_ 321 YVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLEL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTTTSSEECSCHHHHHHH
T ss_pred HHHHHHHHCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHH
T ss_conf 76766513569996653213155151799999999998413479989987789999999719735870798778999999
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
.
T Consensus 401 L~G~~LPgi~aL~~k 415 (415)
T d16pka_ 401 LEGKTLPGVTVLDDK 415 (415)
T ss_dssp HTTCCCHHHHTSCBC
T ss_pred HCCCCCCHHHHHHCC
T ss_conf 879996257785069
|
| >d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: TK-like PP module domain: Pyruvate dehydrogenase E1 component, PP module species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31339.80 Aligned_cols=1 Identities=100% Similarity=1.832 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~e~~~~~~iR~~~~~~v~~a~~~~~~~GGH~g~~ls~~~l~~vl~~~~~~~p~~~~~d~ 80 (415)
T d2ieaa2 1 ISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGD 80 (415)
T ss_dssp CCCSSCSSCGGGCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCCHHHHHHHHHHHHHHHHTCCCCCSSSCCC
T ss_pred CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99853688854368999889999999999999999999982678998898254679999999999985148987688887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ilskGHas~~lYa~l~~~g~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~a~~~ 160 (415)
T d2ieaa2 81 LVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRG 160 (415)
T ss_dssp EEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79835750299999999839875035777753135789898888777888776798202157899999999987876530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~gDg~~~eg~~~ea~~~a~~~~l~nl~~i~d~N~~~~~~~~~~~~~~~~~~~~~~~~~gw~v~~~~~~ 240 (415)
T d2ieaa2 161 LKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWG 240 (415)
T ss_dssp SCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBC
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 23578842899954320023899999988887288808999967863356671014311488999998648626874031
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~d~~~al~~~~~~~v~g~~~~~~~~~ga~~~~~~~~~~~~~~~l~~~l~~~~~~~l~~dGHd~~~l~~a~~~ 320 (415)
T d2ieaa2 241 SRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKK 320 (415)
T ss_dssp GGGHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTGGGSHHHHTTSTTSCHHHHTTCCBGGGCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 02444320102434334121033431100002441566665303421046787663131455665315740446899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ak~~~d~P~vI~a~TiKGkGlp~A~e~~n~~H~~kkl~~Ee~~~~r~rl~~pl~d~~~e~~pf~~p~~~s~e~~~l~err 400 (415)
T d2ieaa2 321 AQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQR 400 (415)
T ss_dssp HHHCCSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHHHTTCSCCHHHHTTCCCCCCCTTSHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98658996289973523368874334621012788899999999999839999813443179778888889999999999
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
.
T Consensus 401 ~~Lgg~lP~r~~~~~ 415 (415)
T d2ieaa2 401 QKLHGYLPSRQPNFT 415 (415)
T ss_dssp HTTTSCSSCCCSSCC
T ss_pred HHHCCCCCCCCCCCC
T ss_conf 984898876787889
|
| >d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31338.97 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~kltl~d~dl~gK~VlvRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~~ak~vIL~SH~GRP~g~~~~~~Sl~~va 80 (415)
T d1qpga_ 1 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVA 80 (415)
T ss_dssp CTTSBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHH
T ss_pred CCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH
T ss_conf 98666850322757998999932467643997896789999999999999879988999624899999879776869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~I~LLENvRF~~eE~~~~~~~~~~~~~~~~n~~~fak~La~laDiyVN 160 (415)
T d1qpga_ 81 KELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYIN 160 (415)
T ss_dssp HHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99985319846984577776311012334467579942111143310246543011100100269999987547848996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 DAFg~aHR~haS~~g~~~~~s~aG~lmekEl~~L~~~l~~p~rP~vaIlGGaKvsdKi~vl~~l~~k~D~iiigG~mant 240 (415)
T d1qpga_ 161 DAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFT 240 (415)
T ss_dssp CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf 55011100565423455785633288999999999996499998599995476442899998787535557751103577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 flk~~~g~~ig~s~~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d1qpga_ 241 FKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKL 320 (415)
T ss_dssp HHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 88760377666531122211023689999876598675512278730245555531230013558765123466046789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~I~~a~tI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L 400 (415)
T d1qpga_ 321 FAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
T ss_conf 99875368679997774152465240689999999997215798299957899999997598568806967789999998
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
.
T Consensus 401 ~G~~LPgi~aL~~~k 415 (415)
T d1qpga_ 401 EGKELPGVAFLSEKK 415 (415)
T ss_dssp TSCCCHHHHTSCBCC
T ss_pred CCCCCCHHHHHHHCC
T ss_conf 799970798885288
|
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uncharacterized protein BH0493 species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=31335.20 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~s~~~ia~~L~~~i~~~PIID~H~HL~p~~~~~~~f~~~~~l~~~hyyk~r~mr~~gv~e~~itg~~~~~~~~~~~~~ 80 (415)
T d2qeec1 1 SINSREVLAEKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEE 80 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHSCEEECSCSCCCGGGGGGSBCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
T ss_conf 97458999999999975898868888969778511677881888431799999998539998980789847889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~p~~~w~~~~l~~~~~l~~~~~~~~~~~i~~~~~~~~~e~~~r~ll~~~nVe~v~tTDdP~D~L~~H~~~~~~~~ 160 (415)
T d2qeec1 81 LFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDTVLQLANVSDVVMTNDPFDDNERISWLEGKQP 160 (415)
T ss_dssp HTTSSCCCSHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHTCCHHHHHHHHHHHTTEEEEECCBCTTCHHHHHHHHTTCCC
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 97428935899999888852567666767899999999762511179999998282035213797321899998604688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~v~ptfRpD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (415)
T d2qeec1 161 DSRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPEESNRGRIIR 240 (415)
T ss_dssp CTTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHHHHCCSCEEEEECTTCCSSCSSHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 75223002479886321007899999886145644576799999999999987325688885687788677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~~~~e~g~~mQlH~Ga~Rn~n~~~~~~g~~~g~~~~~~L~~ll~~~~~~k~il~~l~~~~~~e~a~lag~f~~v~l 320 (415)
T d2qeec1 241 DCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLREYPNNKFLVTMLSRENQHELVVLARKFSNLMI 320 (415)
T ss_dssp HTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHHHCTTSCEEEEECCGGGHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 99999987569817873376667773103478775767999999999848998879996896538999999853887067
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 gg~WWf~d~~~gm~~~l~~~~e~~~~~fvg~~TDsRsf~~~~~rheyfRRil~~~L~~~v~d~v~~g~~~~~~~l~~~v~ 400 (415)
T d2qeec1 321 FGCWWFMNNPEIINEMTRMRMEMLGTSFIPQHSDARVLEQLIYKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRDVA 400 (415)
T ss_dssp BCCCGGGCSHHHHHHHHHHHHHHHTTCSBCCCCCCSBTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 77016636899999999999874400112254586644303378999999999999999999973689997999999999
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
+
T Consensus 401 dI~y~Na~~yfg~~~ 415 (415)
T d2qeec1 401 DLFSRNFWRFVGRND 415 (415)
T ss_dssp HHHTHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999828899
|
| >d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=31330.91 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~iP~k~~~~~~~~~~~~~~~~~~~~y~Gg~V~~P~~G~~~~V~~lDf~SLYPSii~~~Ni~ 80 (415)
T d1s5ja2 1 EISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGKGYKGAVVIDPPAGIFFNITVLDFASLYPSIIRTWNLS 80 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTBCCCCHHHHHHTTCC--------------CCCCCCCSEEEEEEEEEEETTHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCC
T ss_conf 96489999999999977985789742245453201110034577387387079987657647878345339999996889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~R~~~~~~~~k~~~~~~~~~~~~d~~Q~A~Ki~~NS~ 160 (415)
T d1s5ja2 81 YETVDIQQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLRDFRVKIYKKKAKNPNNSEEQKLLYDVVQRAMKVFINAT 160 (415)
T ss_dssp TTTBSCSCCSSCCEECCSSSCCCEEBCCSSCCHHHHHHHHHHHHHHHTHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30237534578765445799745786378887427899999999987420021123442268888788999999877777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 YG~~G~~~~~~~~~~~A~~iT~~GR~~i~~~~~~~~~~g~~viygDTDSv~v~~~~~~~~e~~~~~i~~~~~~~le~e~~ 240 (415)
T d1s5ja2 161 YGVFGAETFPLYAPRVAESVTALGRYVITSTVKKAREEGLTVLYGDTDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKT 240 (415)
T ss_dssp HHHHHSTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEESCCHHHHHHHHHHHHHHSSCCEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 77775466442328999899999999999888876605962466423314896288753999999987332212554425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~KKrY~g~~~dgkl~~kGie~vRrd~~~~~k~~~~~vl~~il~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ 320 (415)
T d1s5ja2 241 YKFVAFSGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFNEVKELMISINSPNDVKEIKRKIVDVVKGSYEKLKNKG 320 (415)
T ss_dssp EEEEEEC----CEEEECSSSCCCEESCCC--------CCSHHHHHHHHHHTTCCSCCTTHHHHHHHHHHHHHHCTTC---
T ss_pred EEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51664431033203220255400110000356537889999999999997169878888878899999999999986079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 i~~~dl~~~k~l~k~~~~Y~~~~p~hv~~A~~l~~~g~~~~~GdrI~YViv~~~~~~~p~~~~~~~~iD~~yYi~~l~~p 400 (415)
T d1s5ja2 321 YNLDELAFKVMLSKPLDAYKKNTPQHVKAALQLRPFGVNVLPRDIIYYVKVRSKDGVKPVQLAKVTEIDAEKYLEALRST 400 (415)
T ss_dssp -------------------------------------------------------------------CCSSTTHHHHHTT
T ss_pred CCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 78688202320146734311799389999999985599999989899999947999882220357998889999999999
Q ss_pred --------------C
Q ss_conf --------------6
Q 001706 633 --------------S 633 (1024)
Q Consensus 633 --------------~ 633 (1024)
=
T Consensus 401 l~~il~~~g~~~~el 415 (415)
T d1s5ja2 401 FEQILRAFGVSWDEI 415 (415)
T ss_dssp STTHHHHHSCCCCCC
T ss_pred HHHHHHHHCCCHHHC
T ss_conf 999998628994439
|
| >d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Flavocytochrome b2, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31265.32 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~aFd~i~l~Pr~L~dvs~i 80 (414)
T d1kbia1 1 APGETKEDIARKEQLKSLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKV 80 (414)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCGGGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSC
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC
T ss_conf 99885444556777631599812167999999999986888888887146665099999999997360665335787678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Dlst~~lG~~l~~P~~Isp~g~~~~~~~~~~~~~~A~a~aa~~~~~~~~ls~~~~~~~~~~~~~a~~~~~~~~~q~y~~~ 160 (414)
T d1kbia1 81 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNS 160 (414)
T ss_dssp BCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCS
T ss_pred CCCEEECCCCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCC
T ss_conf 88534898417888788745640456822367887764777641365322322346568899872177541011021124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~l~~ra~~ag~~al~~tvD~~~~g~re~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~i~~ 240 (414)
T d1kbia1 161 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEE 240 (414)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 58889999999987188510123344324651787872556654331444203554553277899985066899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~~~~~~~~i~kgi~~~~da~~~~~~G~~~i~vsnhggr~~d~~~~~~~~l~~i~~~~~~~~v~~~~~viadGGIR~G~D 320 (414)
T d1kbia1 241 LKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTD 320 (414)
T ss_dssp HHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHH
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 86157752775200006777788743886245223211111112200000024666664111488513885388676789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 VaKALALGAdaVgigrp~L~~la~~G~egv~~~l~~l~~EL~~~M~l~G~~si~eL~~~~l~~~~~~~~~~~~p~~~~~~ 400 (414)
T d1kbia1 321 VLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLKARTVGVPNDVLYN 400 (414)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTTCEECCCCCCHHHH
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf 99999758998877689999998446999999999999999999998589997891998834232243367899512210
Q ss_pred -------------C
Q ss_conf -------------6
Q 001706 633 -------------S 633 (1024)
Q Consensus 633 -------------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~~~~~~ 414 (414)
T d1kbia1 401 EVYEGPTLTEFEDA 414 (414)
T ss_dssp HHCCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCC
T ss_conf 35678775333679
|
| >d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: GckA/TtuD-like superfamily: GckA/TtuD-like family: GckA/TtuD-like domain: Putative glycerate kinase (hypothetical protein TM1585) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31264.67 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~lr~~~~~if~a~v~av~P~~~v~~~l~~~~~~~i~vvg~GKAa~~MA~~~~~~lg~~i~~g~vv~~~~~~~~~~~~i 80 (414)
T d2b8na1 1 PESLKKLAIEIVKKSIEAVFPDRAVKETLPKLNLDRVILVAVGKAAWRMAKAAYEVLGKKIRKGVVVTKYGHSEGPIDDF 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTSHHHHHHTTHHHHCCCSEEEEEESTTHHHHHHHHHHHHGGGEEEEEEEEETTCCCSCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 95689999999999998419789999847757999889999818999999999997276677059995898677888874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk 160 (414)
T d2b8na1 81 EIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRK 160 (414)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 89978999998779999999999996489887689985088540011488999999999999999858998799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvpd~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~~~~v 240 (414)
T d2b8na1 161 HLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPDSSTSEDALKVLEKYGIETSESVKRAILQETPKHLSNV 240 (414)
T ss_dssp TTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSCCSSE
T ss_pred HHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98753662799971558568999805889981312048867899888999999998398777689986513578433454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~ii~~n~~al~aa~~~a~~~G~~~~~~~~~l~Gea~~va~~~a~~~~~~~~~~~~~~~p~~li~GGEtTV~v~g~G~G 320 (414)
T d2b8na1 241 EIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEAREAGRFIASIMKEVKFKDRPLKKPAALIFGGETVVHVKGNGIG 320 (414)
T ss_dssp EEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHHCCSSCSSEEEEEEECCBCCCCSCCCC
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCC
T ss_conf 13895689999999999998749943995342457689999999999999985278888974899756568870689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 GRNqElaL~~a~~l~~~~~~~~ls~gTDG~DGptdaAGAivd~~t~~~~~~~gld~~~~L~~~DS~~f~~~~~~li~TGp 400 (414)
T d2b8na1 321 GRNQELALSAAIALEGIEGVILCSAGTDGTDGPTDAAGGIVDGSTAKTLKAMGEDPYQYLKNNDSYNALKKSGALLITGP 400 (414)
T ss_dssp CHHHHHHHHHHHHTTTCTTEEEEEEETTSCCSSSSCCEEEEETTHHHHHHHTTCCHHHHHHTTCHHHHHHHTTCEECCCC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCEECCCC
T ss_conf 64399999999983699996999975478878988775887662799999869999999987786999997699786199
Q ss_pred -------------C
Q ss_conf -------------6
Q 001706 633 -------------S 633 (1024)
Q Consensus 633 -------------~ 633 (1024)
=
T Consensus 401 TgTNV~Dl~i~li~ 414 (414)
T d2b8na1 401 TGTNVNDLIIGLIV 414 (414)
T ss_dssp CSCCCCEEEEEEEC
T ss_pred CCCCHHHHEEEEEC
T ss_conf 99656350777969
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31261.69 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 97999999999999998629999999999999999997699999999999865886041177787874249999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~ 160 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAI 160 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCHHEECCCCHHCCCCCCCCCCCCHHHHHH
T ss_conf 99999865511233443344332101211221232012315717776514101001365201045600011002034677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~ 240 (414)
T d1o20a_ 161 REALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240 (414)
T ss_dssp HHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCCHHHHH
T ss_conf 76543212432124555543103444123334358699746079999876540344021046987871053335434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~FgPvl~v~~~ 320 (414)
T d1o20a_ 241 PVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVV 320 (414)
T ss_dssp HHHHHHHHSCTTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCSSEEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCEEEEEEEEEEEE
T ss_conf 68875441378643355522010889999999986899976986555465542110000002456770220037999994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t 400 (414)
T d1o20a_ 321 KNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELT 400 (414)
T ss_dssp SSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGE
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHC
T ss_conf 99999999985589998179995899999999983981499991898688888879978156249989987456799849
Q ss_pred -------------C
Q ss_conf -------------6
Q 001706 633 -------------S 633 (1024)
Q Consensus 633 -------------~ 633 (1024)
.
T Consensus 401 ~~K~vv~~~~~~~~ 414 (414)
T d1o20a_ 401 TYKFVVLGEYHVRE 414 (414)
T ss_dssp EEEEEEECSSCCCC
T ss_pred EEEEEEECCCCCCC
T ss_conf 57799987875378
|
| >d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31258.36 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~iV~l~GDE~tr~i~~~i~~~~~~~~~di~~~~~d~G~e~~~~tg~~l~~daieaik~~~v~lkG~~~tP~~ 80 (414)
T d1t0la_ 1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDE 80 (414)
T ss_dssp CCCCEEEEEEEEEECCHHHHHHHHHHHHHTTTTTEEEEEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 98643368779956718999999999999707897752799826789998629967799999998669886678679873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~s~n~~lR~~~~~~~~~rp~~~~~~~~~~~~~~~d~vvvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (414)
T d1t0la_ 81 KRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSD 160 (414)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECC
T ss_conf 33330012211010028889862765231126864899876787674367404554425436899779860689985046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~a~~~a~~~r~~v~~~~K~nv~~~t~glfr~~~~eva~~yp~~~~~ 240 (414)
T d1t0la_ 161 GTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFE 240 (414)
T ss_dssp CSCCEEEEEEEECSCCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCEEECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 65310000123467784268776205566788889999998469735875035614445288999999999876330134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~v~~~~~~~Da~~~~~~~~p~fdVivt~NLfGDILSDl~a~l~GglGl~pSanig~~~~~~~fe~~hg~aP~hGsapd 320 (414)
T d1t0la_ 241 AQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQ 320 (414)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf 32025666677789874148988728997674530566566562577431210115764334412355555543221001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 iAGk~iANP~A~ILS~amML~~lg~~d~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~lsT~ef~da 400 (414)
T d1t0la_ 321 KGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDK 400 (414)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHSCGGGCCGGGCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 37766539099999999999985265643689999999999999999679988231877666665556676589999999
Q ss_pred -------------C
Q ss_conf -------------6
Q 001706 633 -------------S 633 (1024)
Q Consensus 633 -------------~ 633 (1024)
-
T Consensus 401 vi~~L~~~l~~~~~ 414 (414)
T d1t0la_ 401 LGENLKIKLAQAKL 414 (414)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999998865659
|
| >d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Bacillus caldotenax [TaxId: 1395]
Probab=100.00 E-value=0 Score=31189.67 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~f~~~~~~~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 1 EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp CCCCCCCCSSCCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 98427705889999888999999999865998589967787489999999999739998999489999999999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~v~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~vIVv~~~a~~~~l~~p~~~~~~~l~l 160 (413)
T d1t5la1 81 PHNAVEYFVSYYDYAQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSL 160 (413)
T ss_dssp TTSEEEEECCGGGTCCCSEEETTTTEEECCCSCCCHHHHHHHHHHHHHHHHCSCEEEEECGGGGSCCCCHHHHHHTSEEE
T ss_pred CCCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEE
T ss_conf 87745432421211442014743443322345677788888766655203567714653000253257857843105898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~G~~i~~~~l~~~L~~~GY~r~~~V~~~GeFsvRG~IiDIfp~~~~e~PvRIEffgDeIesIr~Fd~~tQrs~~~~~~v 240 (413)
T d1t5la1 161 RVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREHV 240 (413)
T ss_dssp ETTCSCCHHHHHHHHHHTTCEECSSSCCTTEEEECSSEEEECCTTCSSEEEEEEESSSSEEEEEEEETTTCCBCCCCSEE
T ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHHHCCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCCCCEE
T ss_conf 66862528899999998435103100000205775351642478533564030650301103551135457211243179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~I~Pa~e~i~~~~~~~~a~~~i~~el~~~~~~~~~~~~~~ea~rl~~~~~~d~e~l~e~~~~~gie~y~~~~~~r~~~~~ 320 (413)
T d1t5la1 241 AIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGST 320 (413)
T ss_dssp EECCSSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTCC
T ss_pred EEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 96346036269999999999999999999999987785889999998767579999852764444555443204666688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~tLlDY~~~d~l~~iDE~~~~~~q~~~~~~~~~~r~~~l~e~G~~LP~a~dn~pL~~ee~~~~~~~~i~vsatP~~~e~ 400 (413)
T d1t5la1 321 PYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYEL 400 (413)
T ss_dssp CCCHHHHSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHHTSSCGGGGGSSCCCHHHHHHHCSEEEEEESSCCHHHH
T ss_pred CCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHH
T ss_conf 73244104787089993626569999999988899899888651657556557976889999864987999579970557
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
.
T Consensus 401 ~~~~~~v~q~irp 413 (413)
T d1t5la1 401 EHSPGVVEQIIRP 413 (413)
T ss_dssp HHSSSCEEECCCT
T ss_pred HHCCCEEEEEECC
T ss_conf 7468846886286
|
| >d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Stabilizer of iron transporter SufD family: Stabilizer of iron transporter SufD domain: Stabilizer of iron transporter SufD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31188.99 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~GlPt~k~E~WKyT~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivf 80 (413)
T d1vh4a_ 1 NALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVF 80 (413)
T ss_dssp CHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHCCCCCSEEEEE
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE
T ss_conf 97899999998628846299999999999729889987281479879974357765677668002000234568548999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 vnG~~~~~ls~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~LN~a~~~~g~~I~V~~~~~~~~PI~i~~~~~~~~~~~~~~ 160 (413)
T d1vh4a_ 81 VDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNT 160 (413)
T ss_dssp ETTEECGGGSCCCTTSSCEEEEESCCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEE
T ss_pred ECCEECHHCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCC
T ss_conf 89998210056755577288515755404110110012332321025432674125357604541467503644344333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~r~~I~v~ena~v~iiE~~~~~~~~~~~~n~~~ei~l~~nA~l~~~~iq~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 240 (413)
T d1vh4a_ 161 AHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLL 240 (413)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEECTTCEEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHCCCCCCCCCEECCEEEEEECCCCEEEEHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC
T ss_conf 11145653055202211121145544100002205899526642430334442233421220112003454146532000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 G~~~~r~~~~~~L~G~~a~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~A~~t~a 320 (413)
T d1vh4a_ 241 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDG 320 (413)
T ss_dssp CCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEE
T ss_pred CCCHHHCCCHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHH
T ss_conf 21100110000112000110011023466422433222320155542041343124666640488653035655225665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~q~~~~llls~~a~~~s~P~Lei~~ddv~~~Hgatvg~id~~~lfYL~sRGi~~~eA~~ll~~gF~~~~~~~~~~~~~~~ 400 (413)
T d1vh4a_ 321 QMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQ 400 (413)
T ss_dssp EEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHCCCCCCEEEECCEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 77665301567744875522899639816994000467898999999976999999999999998999998698299999
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
.
T Consensus 401 ~~~~~i~~~l~~~ 413 (413)
T d1vh4a_ 401 QVLARIGQRLPGG 413 (413)
T ss_dssp HHHHHHHTTSTTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999872489
|
| >d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31183.22 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~ltl~d~d~~gK~VllRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~gak~Vvl~SH~GRP~~~~~~d~~SL~pva~~ 80 (413)
T d1hdia_ 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE 80 (413)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCCSSCCTTTSCSHHHHHH
T ss_pred CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98754102868998999931587744990897489999999999999879998999537889999977854587999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 L~~~L~~~V~f~~d~~g~~~~~~i~~l~~geilLLENvRF~~~E~~~~~~~~~~~~~~e~~n~~~f~~~La~l~DvyVND 160 (413)
T d1hdia_ 81 LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND 160 (413)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTEEECTTSCEEECCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99986886066056513556554320234317980221104211134432011000110243699999876328889953
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 AF~~aHR~haS~~gi~~~~~~~G~LmekEi~~L~~~l~~p~~P~vaIlGGaKvsdKi~vi~~L~~k~d~iiigGgmantf 240 (413)
T d1hdia_ 161 AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240 (413)
T ss_dssp CGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEECCSCSGGGHHHHHHHHTTCSEEEECGGGHHHH
T ss_pred CHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECCHHHHHH
T ss_conf 42111125762220135642116899999999876540788761699842554338999998875310154035468999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 L~a~~g~~iG~sl~e~~~~~~~~~~~~~~~~~~~~i~lp~d~~~~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~~ 320 (413)
T d1hdia_ 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY 320 (413)
T ss_dssp HHHHHCCCBTTCCCCTTGGGTHHHHHHHHHHHTCEEECCCEEEEESSSSTTCCEEEEETTTCBCTTCEEEEECHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 99715974563340322004677777789871984344541354124566555455442113588764431530236788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~I~~aktI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~a~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L~ 400 (413)
T d1hdia_ 321 SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE 400 (413)
T ss_dssp HHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCTTTSSEECSCHHHHHHHHT
T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
T ss_conf 88761587799988834566761538999999999985148998999377999999974986798479278799999987
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
-
T Consensus 401 G~~LPgi~aL~~~ 413 (413)
T d1hdia_ 401 GKVLPGVDALSNV 413 (413)
T ss_dssp TCCCHHHHTSCBC
T ss_pred CCCCCHHHHHHCC
T ss_conf 9996246352049
|
| >d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein BC3205 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3205 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31182.60 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~i~~~a~pl~~~d~~~~~~DL~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~vA~E 80 (413)
T d2qgma1 1 SGQSVQKNIVKSIQSQANPLKTIEPSKPFEDLKPLKKMIGNAQYVGLGENTHGSSEIFTMKFRLVKYLVTEMGFTNFAME 80 (413)
T ss_dssp CCSSHHHHHHHHHHHHCEECCCCCTTSCCGGGHHHHHHHTTCSEEEECCSSSCBHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98427789999999846558778989876789999986479749998468667079999999999999997599789992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~d~~~~~~vn~yV~~g~g~~~~~~~~~w~~~e~~~lv~WlR~~N~~~~~~~~v~f~G~D~~~~~~~s~~~v~~yl~~~~p 160 (413)
T d2qgma1 81 EDWGNGLKLNEYIQTGKGNPREFLKLLYPTDEIIAMIEWMKDYNADPSNKKKIQFIGLDLKALDQGSFNKVIDYVRLHRP 160 (413)
T ss_dssp EEHHHHHHHHHHHHHCCSCGGGTSCTTSCBHHHHHHHHHHHHHHHCTTCCSCCEEEEEECSCCCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCH
T ss_conf 69588999999986388787887787525177999999999970458978842699744465535469999999986196
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~ 240 (413)
T d2qgma1 161 DLLAEVEENYKELSSFTGSIQEYMKLTPKLKEKFKANAERVARLLKDENEQANTEIIPSEYIWAKATASAIEKFTTMLLP 240 (413)
T ss_dssp TSHHHHHHHHHTGGGSCSCHHHHTTSCHHHHHHHHHHHHHHHHHTSCC-----------CHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78999999974603123478999775176788899999999999997676505432344899999999999999999706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~RD~~Maenl~~~~~~~~~KiivwAHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~ 320 (413)
T d2qgma1 241 NDYPSIIKLHEQYLADHAMWAQETFGGKTMVWAHNIHIAKGIIDEKLYPYVAGQFLKERLDNNYVTIGSTTTEGNFTLYS 320 (413)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHCSCEEEECCHHHHCSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCC
T ss_conf 87401377899999999999974789978999554110757565433666589999998488469999873466041257
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~~p~~~~s~e~~l~~~~~~~~~ld~r~~~~~~~~~l~~~r~~r~iG~~y~P~~~~y~~~~~~~~fDa 400 (413)
T d2qgma1 321 EYNPSTGGKITTDTIPQDVKSFNYTLGKVPYKMFLLDNRHLKGQAEKWVKAKRPLLSIGGQILPNSSVYFDTSLLEQFDI 400 (413)
T ss_dssp CC-----CCCEEEECCCCTTSHHHHHHHSSCSEEEEEGGGCCHHHHHHHHSEEEEECCCSCC-----CEEEEEHHHHCSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCHHHHCCE
T ss_conf 77875566303678999952699997135877467552004535678883711211310244588764446895997978
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
.
T Consensus 401 li~i~~ttPa~~~ 413 (413)
T d2qgma1 401 IFHIRKTSPSHIK 413 (413)
T ss_dssp EEEEEEECBCCBC
T ss_pred EEEECCCCCCCCC
T ss_conf 9997146703129
|
| >d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31182.47 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~ki~v~~pIv~l~GDeit~~~~~~i~~~l~~~~~di~~~~~d~G~~~~~~tg~~l~~eaiea~k~~~aiLkGa~~tP~ 80 (413)
T d1lwda_ 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf 99750305777995486379999999999970678886279970788999874996769999999975977788867997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~s~n~~lR~~ldl~an~RP~~~~~~~~~~~~~~~d~VivREnteg~Y~g~e~~~~~~~~~~i~~~~~ 160 (413)
T d1lwda_ 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCCCEEEEECC
T ss_conf 32235444432210001568976387458721002578876788887727752254443503423226766320577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ria~~af~~a~~~~~~vt~v~K~nvl~~~~glf~~~~~eva~~~p~~~~~ 240 (413)
T d1lwda_ 161 DGSSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFD 240 (413)
T ss_dssp TCCCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 66542233200256652000001332025678999999997159605775046356600479999999999874003564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~I~~~~~~vd~~~~~lv~~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag~~~ 320 (413)
T d1lwda_ 241 KYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQ 320 (413)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
T ss_conf 23799861455555565228988739997563405676677874389777764324787554333346566000000121
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 iagk~iANP~a~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~sT~ef~d 400 (413)
T d1lwda_ 321 KGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLD 400 (413)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 17765659599999999999973454444579999999999999999779988465887666655555677638999999
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
.
T Consensus 401 aV~~~L~~~l~~~ 413 (413)
T d1lwda_ 401 TIKSNLDRALGRQ 413 (413)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999987529
|
| >d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase S, AMPS species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=31181.15 Aligned_cols=1 Identities=0% Similarity=-1.855 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~~~d~~i~r~~~~~~~~e~l~~~e~ 80 (413)
T d1zjca1 1 NYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEI 80 (413)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEEEECHHHHHHHHHHSCHHHHHHTSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCC
T ss_conf 97899999999999983068999989999567439999999999998699648995087899999871899668353202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~a~i~i~~~~p~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~a~A~~a~~~l 160 (413)
T d1zjca1 81 KSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPEL 160 (413)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCTTTTTTSCHHHHHHHHHHHHHHTHHHHHHHHTTCSCEEEEECCCHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC
T ss_conf 56679999999865884899726895242037989999999999999899999986476566999568767776645899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~e~~~~~~d~if~a~~lD~~dpv~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~gTDLt~~l~~~~~~~~~~~~~~~~~ 240 (413)
T d1zjca1 161 SVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKE 240 (413)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEETTEEEEEEECTTBCCBCSEEEGGGTS
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCC
T ss_conf 87999999999999750788051799999999999999999854072479943898407999358737716875236777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~NlP~gEvft~P~~~~~~G~i~~~~~~~~~G~~~~~i~l~f~~G~vv~~~~~~~~~~l~~~l~~d~~a~~~gE~~i 320 (413)
T d1zjca1 241 QAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVAL 320 (413)
T ss_dssp SEEESBSSCCCEEECEEEEEEEEEEECSSCEEETTEEEEEEEEEEETTEEEEEEEEESHHHHHHHHTSSGGGGSEEEEEE
T ss_pred CCCCCCCCCCCEEEEECCCCEEEEEEECEECCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 76648899800686131586137999782526298832481899989999999747659999876404866536767753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 g~n~~~~~~~~~~~~~~L~DEkgt~H~a~G~~Y~~~~~~~~~~~~~~~~~~G~n~s~~H~D~~i~~~~~~i~gv~~dG~~ 400 (413)
T d1zjca1 321 VPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSK 400 (413)
T ss_dssp CCSSSTTGGGCCCCSSHHHHTTTSCEEEEECCCGGGBTTGGGCCHHHHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCE
T ss_conf 16886543435442451587489744667756421113665578145401798676457876347871568999818978
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
-
T Consensus 401 ~~I~~~G~f~~~~ 413 (413)
T d1zjca1 401 ELVFENGNWASTF 413 (413)
T ss_dssp EEEEETTEECTTC
T ss_pred EEEEECCEECCCC
T ss_conf 8999899976769
|
| >d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Glucodextranase, domain A species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31178.32 Aligned_cols=1 Identities=0% Similarity=-0.725 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~S~l~lk~~~~~~~~GaiiAapt~~~pe~~~~~~n~d~Yry~W~RDaa~~~~al~~~G~~~~a~~~ 80 (413)
T d1ulva1 1 PATSLTGALRTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARG 80 (413)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 98657889999999999999973468999848875888887666775689871166180599999999986998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~~~~~~~G~~~~~y~~dg~~~~~~~Q~D~~g~~l~~~~~~~~~~~~~~~~~i~~a~~~l~~~~~~~~~~lWEe~~ 160 (413)
T d1ulva1 81 VEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDETAFPILLANQIGRTDAGFYRNELKPAADYLVAAGPKTPQERWEETG 160 (413)
T ss_dssp HHHHHHHTCCTTSCCCSCBCTTSCBCCCCCBTHHHHHHHHHHHHHTCCCHHHHHHTHHHHHHHHHHHCSCBSBCTTSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999985079996056546687767776763038999999999853001678999999999999738898745454678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~T~~~~~~aL~~aa~la~~~gd~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~y~~r~~~~~~~~~~~~~~~~~ 240 (413)
T d1ulva1 161 GYSTSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGN 240 (413)
T ss_dssp BEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECST
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 85431189999999999999998398167889999999999999996018655623321011036666654320000123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~vDas~l~~~~~g~~~~~d~r~~~t~~~i~~~L~~~~~~g~~~~Ry~~D~y~~~~~g~~~~~~~i~t~W~~ 320 (413)
T d1ulva1 241 GAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDASISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPL 320 (413)
T ss_dssp TCCEEEGGGCCBGGGGHHHHTTSSCTTCHHHHHHHHHHHHHHEEEETTEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTH
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 45666677765788763112178798887899999999998546778777420024667657788887633112789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~a~~~~g~~~~A~~ll~~l~~~~~~~G~LpEqv~~~~~~~~~~~~~~~~~~sa~PlaWS~A~~i~l~~~l~~g~~~ 400 (413)
T d1ulva1 321 LSGERGEYALANGQDALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGAPV 400 (413)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999998648788999999999976687886563016788830025778999888776374789999999998669976
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~~~~~ 413 (413)
T d1ulva1 401 ETPQNVAARYAAG 413 (413)
T ss_dssp SSCHHHHHHHTSS
T ss_pred CCCHHHHHHHHCC
T ss_conf 6762899874149
|
| >d1a0tp_ f.4.3.2 (P:) Sucrose-specific porin {Enterobacterium (Salmonella typhimurium) [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane beta-barrels superfamily: Porins family: Maltoporin-like domain: Sucrose-specific porin species: Enterobacterium (Salmonella typhimurium) [TaxId: 90371]
Probab=100.00 E-value=0 Score=31175.97 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~GfeFhGY~RsG~g~s~~g~~~~~~~~~~~~~~~~g~~gRLGNE~d~y~El~l~~~~~~~~g~~~~~~~~~a~~~~~~~d 80 (413)
T d1a0tp_ 1 SGFEFHGYARSGVIMNDSGASTKSGAYITPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTSYND 80 (413)
T ss_dssp CCEEEEEEEEEECCEETTSSCCCCCTTCSGGGGGTCCCCCTTCCCSEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCSS
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC
T ss_conf 95168527785734847898654563216565666565424664351798883457781599599999997115655578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~q~yve~~nl~~f~~~~~~a~~WaGkR~y~r~~dIhi~D~~y~~~sG~GaGieni~lG~g~~~~~~~~~~ 160 (413)
T d1a0tp_ 81 WTASTSDLNVRQAFVELGNLPTFAGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKWNDGLRSNFSLYGR 160 (413)
T ss_dssp CCGGGCCCEEEEEEEEEESCTTCCGGGTTCEEEEEEEECTTCEEEGGGTEEEEBCEEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCCCCHHEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECEEEEECCCCCEEEEEEEEC
T ss_conf 75666530110303464586434677998639744420366567542310468658857564721037884688999942
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~G~~~G~nk~~ 240 (413)
T d1a0tp_ 161 NFGDIDDSSNSVQNYILTMNHFAGPLQMMVSGLRAKDNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTA 240 (413)
T ss_dssp EEECTTCGGGEEEEEEEEEEEEETTEEEEEEEEECTTGGGCBCSSSSBSCSSCCSEEEEEEEEEEEEESTTSSEEEEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEH
T ss_conf 56776667875111687531157379999964303773443215654346764465308999996142000358635151
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lQyg~G~~a~~~~~~~~~~~~~~~~s~Rl~~~G~~~~~~~~~~~~~~~y~~~~d~~~~~~~~~~~s~gvRP~y~~~~~~~ 320 (413)
T d1a0tp_ 241 LLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPLSENWSVAPAMLAQRSKDRYADGDSYQWATFNLRLIQAINQNFA 320 (413)
T ss_dssp EEEEEETTCSCSBTTCCTTCCTTCEEEEEEEEEEEESSSSEEEEEEEEEEEEESSSSTTCEEEEEEEEEEEEEESSSSEE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEE
T ss_conf 62375715577565787862799508999986644135876776668999851667789970799999888589668689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~E~gy~~~~~~~~g~~~~~~~~~~~~K~TlA~~~~~g~~~~fwsRPeiR~faTY~~w~~~~~~~~~~~~~~~~~~~~~ 400 (413)
T d1a0tp_ 321 LAYEGSYQYMDLKPEGYNDRQAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSG 400 (413)
T ss_dssp EEEEEEEEEEEEECTTGGGCCCEEEEEEEEEEEEEEESSCTTCTTCCCEEEEEEEEEEECGGGGGSCSSSSTTBTTBCSS
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 99998886640344675366666783589999763132897876779789999999805412200224565454677888
Q ss_pred ------------C
Q ss_conf ------------6
Q 001706 633 ------------S 633 (1024)
Q Consensus 633 ------------~ 633 (1024)
=
T Consensus 401 ~~~~fGvQ~E~Ww 413 (413)
T d1a0tp_ 401 GEWSFGVQMETWF 413 (413)
T ss_dssp CEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEC
T ss_conf 8789999998769
|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Malonamidase E2 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=100.00 E-value=0 Score=31109.42 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~ls~~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~lna~~~~~~~~~~~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~ 80 (412)
T d1ocka_ 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYR 80 (412)
T ss_dssp CCCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCCCCSSSTTTTCEEEEETTBCCSSSCCCTTSGGGT
T ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 98789999999869998999999999999976961598174439860766798688879987661778974166486661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~a~~V~~L~~aGaii~gkt~~~e~~~~~~~~~~np~~~~~~~GgSSgG~aaava~g~~~~a~GsDtgGSiR~PA 160 (412)
T d1ocka_ 81 GWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPA 160 (412)
T ss_dssp TCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSCCCSCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHH
T ss_pred CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
T ss_conf 78875301477652012433000001666502566543334466666777678761111034566557654023441015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~cGi~GlKPT~G~v~~~g~~~~s~~~dt~Gp~arsv~Dl~~~l~~i~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 240 (412)
T d1ocka_ 161 AYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAE 240 (412)
T ss_dssp HHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCCCCSSCEEEECCCGGGCCCCHHHH
T ss_pred HHHCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 55302101344100123344443201111223445188999999864288721244776444334432323345106777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~a~~~L~~~G~~v~e~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 320 (412)
T d1ocka_ 241 QGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARR 320 (412)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHSGGGSCHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 78888888888764023223453102333455541125789887777640242321245544333210122210001124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~r~~~~~~~~~~f~~~D~ll~Pt~p~~ap~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~GlPvGlQiig~~~~D~~lL 400 (412)
T d1ocka_ 321 IGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGDPRYNRLWTLMGNPCVNVPVLKVGGLPIGVQVIARFGNDAHAL 400 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEESSSSSCCBGGGCCCCCCTTTHHHHHHCCCEEEEEEEEETTEEEEEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
T ss_conf 67899999999982799999689988776300045687577599999789849983668999607688889999899999
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
.
T Consensus 401 ~~A~~~E~alg~ 412 (412)
T d1ocka_ 401 ATAWFLEDALAK 412 (412)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998583
|
| >d1yzya1 c.146.1.1 (A:1-412) Hypothetical protein HI1011 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YgbK-like superfamily: YgbK-like family: YgbK-like domain: Hypothetical protein HI1011 species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=31106.05 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 i~iIADDlTGA~dt~~~~~~~G~~t~~~~~~~~~~~~~~~dvv~i~t~SR~l~~~eA~~~v~~~~~~l~~~~~~~~~~Kv 80 (412)
T d1yzya1 1 LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKY 80 (412)
T ss_dssp CEEEESSHHHHHHHHHHHHTTTCCEEEEESCCSSCCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 96895273528999999998799099971788500057899899985778999999999999999999863897158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~s~~DStlRGnig~Ei~a~~~~~~~~~~~v~PA~P~~gR~t~~G~~~v~g~pl~~t~~a~dP~tP~~~s~l~~ll~~qs~ 160 (412)
T d1yzya1 81 CSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAK 160 (412)
T ss_dssp CTTCCCCTTCTHHHHHHHHHHHHTCCCEEECCCBGGGTEEEETTEEEETTEEGGGSGGGGCSSSCCCCCBHHHHHHHHCS
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 73133777678589999999763997699946756577699998999898875676100288989775027777555237
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~~i~~~~v~~~~~~~~~~l~~~~~~~~~~vv~Da~t~~dL~~ia~a~~~~~~~~GsaGla~~l~~~~~~~~~~~~~~ 240 (412)
T d1yzya1 161 GKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSGGKKGTNAF 240 (412)
T ss_dssp SCEEEECHHHHTTCHHHHHHHHHHHHHTTCSEEEECBSSTHHHHHHHHHTTTCSEEEESHHHHHHHHHHHHTSCCGGGCC
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCC
T ss_conf 85354219988645067999999876179866998369889999999973288079954407778887512466654345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~Lvv~GS~s~~T~~Ql~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1yzya1 241 TPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIEQLYQWVIANLDSEFAPMVYATVPPDALKAIQHQ 320 (412)
T ss_dssp CCCSCCEEEEECCCSHHHHHHHHHHTTTSCEEECCHHHHHHCTTHHHHHHHHHHTTTTSSSCCEEECCCCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 78888679998267488999999998509859963899617817999999999998736997588843764555566543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~i~~~l~~~~~~l~~~~~~~lv~tGGdTa~av~~~Lg~~~l~~~~ei~pGvp~~~~~~~gl~ivtK~G~fG~ 400 (412)
T d1yzya1 321 FGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPWLKAVEEDIFLALKSGNFGK 400 (412)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEESHHHHHHHHHHHTCCEEEEEEEEETTEEEEEESSSSCEEEEECTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
T ss_conf 01677999999999999999875587869992639999999975998666757426982079766998079997898898
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
=
T Consensus 401 ~D~~~~a~~~~~ 412 (412)
T d1yzya1 401 EDFFEYAQGMFL 412 (412)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHHHC
T ss_conf 569999999759
|
| >d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
Probab=100.00 E-value=0 Score=31105.71 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~ 80 (412)
T d1yaaa_ 1 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp CTTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 94734458747998699999998467898968830677748889988868999999999728654777899877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~ 160 (412)
T d1yaaa_ 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC
T ss_conf 99999723447665666526871442046799999987503899877246435740679999859910105633334344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1yaaa_ 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCC
T ss_conf 21101000124578751799944899985445899999999866114887974520010000588656524432223212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 320 (412)
T d1yaaa_ 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 46887599982577645676760799975056666788888888889999987736797688999999706847789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l 400 (412)
T d1yaaa_ 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHH
T ss_conf 89999999999999999999997289888753689952798229699999999996788878988798515988889999
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
+
T Consensus 401 ~~ai~~v~k~~~ 412 (412)
T d1yaaa_ 401 AKAIDEVVRFYA 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999998509
|
| >d1rxxa_ d.126.1.4 (A:) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=31105.17 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~v~sE~g~Lk~Viv~~Pg~e~~~l~p~~~~~~lf~~~~~~~~a~~eh~~f~~~L~~~Gv~V~~l~~~l~e~~~~~~~ 80 (412)
T d1rxxa_ 1 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEA 80 (412)
T ss_dssp CCSEECCSSSCEEEEEECCCCHHHHTCCTTTTGGGTCSCCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHHHTTSHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHH
T ss_conf 97753777100007896698388773690015664367788999999999999999997798899705768877349588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plpn~~F~R 160 (412)
T d1rxxa_ 81 LKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTR 160 (412)
T ss_dssp HHHHHHHHSCHHHHCTTTHHHHHHHHHTSCHHHHHHHHHHCEEGGGSCSCHHHHHHHHHHHHSCCCCEEECCCGGGGCTT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECC
T ss_conf 99999875032334655899999998708989999998626421003444332112211000356533578862121315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 D~~~~i~~gvii~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~EGGDvl~~g~~~l~~g~s~RTn 240 (412)
T d1rxxa_ 161 DTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSS 240 (412)
T ss_dssp TTEEECSSEEEECCCSSGGGHHHHHHHHHHHHHCHHHHTSCCEEEECCTTSCCTTCCCCGGGEEEEETTEEEEEESSSSC
T ss_pred CCCCEECCCEEECCCCCHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
T ss_conf 77534669789668997365436799999998580220576310147655547766042560899679689999431050
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~gi~~L~~~l~~~~~~~~v~~~~~p~~~~~~HLDt~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1rxxa_ 241 RQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTF 320 (412)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEECCC--CCCCHHHHEEEEETTEEEECHHHHTTCEEEEEEECTTSTTSEEEEECSSCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCCH
T ss_conf 99999999986642806775502678765420025427751798599831242754430442156655551010254317
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~l~~~l~~~~~~~i~~~~d~~~~~~e~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gi~vi~v~~~el~~~gGg~h 400 (412)
T d1rxxa_ 321 LEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGH 400 (412)
T ss_dssp HHHHHHHTTCSCCEEEECCCSCC--CCSSCCCCCCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCTTTTSSSCCTT
T ss_pred HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCE
T ss_conf 89999971898707955798525555666406520899679989984889999999997899899966567413798867
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
.
T Consensus 401 C~T~pl~Re~i~ 412 (412)
T d1rxxa_ 401 CMTCPIVRDPID 412 (412)
T ss_dssp TTCEEEEECCCC
T ss_pred ECCCCCCCCCCC
T ss_conf 887034627999
|
| >d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]
Probab=100.00 E-value=0 Score=31104.28 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~s~~~~~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lr 80 (412)
T d1ajsa_ 1 APPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80 (412)
T ss_dssp CCCCTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHH
T ss_pred CCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 99584440876899769999999836899996884178875888999886899999999973787688889977789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 eaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~ 160 (412)
T d1ajsa_ 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRY 160 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 99999985157843245662230365305678899999988764047998989994786331689999859927874223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 240 (412)
T d1ajsa_ 161 WDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp EETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCHHHH
T ss_conf 36233554378999999725677389995589998687899999999999986389789830765654059865651566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1ajsa_ 241 RYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT 320 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 65444124321234663223577777345445616788999999999998631535641689999999853888899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~ 400 (412)
T d1ajsa_ 321 GNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHH
T ss_conf 99999999999999999999998489887036658975798459899999999985999981898688336988889999
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
.
T Consensus 401 a~aI~~av~~~~ 412 (412)
T d1ajsa_ 401 ATSIHEAVTKIQ 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999639
|
| >d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Tyrosine aminotransferase (TAT) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=0 Score=31103.62 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LRea 80 (412)
T d1bw0a_ 1 WDVSMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREA 80 (412)
T ss_dssp CCCCCCHHHHTCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 98781234568852899999856777799984788697899999852129999999998628777788998688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 160 (412)
T d1bw0a_ 81 VATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 160 (412)
T ss_dssp HHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999975475435687888886999446222025666543114432046411330144455405864222332223333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1bw0a_ 161 EADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTV 240 (412)
T ss_dssp EECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 12467887653111222222334333332201443023211222377666520217875447888764100001223433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 320 (412)
T d1bw0a_ 241 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 320 (412)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 11311555755756877743201240433003555554034553347750343202222333222333322110278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~l~~~~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal 400 (412)
T d1bw0a_ 321 YLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAV 400 (412)
T ss_dssp HHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHCCCEECCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 99999987349254378971499995782343788899999999998699999966214899939999738999999999
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
.
T Consensus 401 ~Rl~~~l~~~~~ 412 (412)
T d1bw0a_ 401 ERIKAFCQRHAA 412 (412)
T ss_dssp HHHHHHHHHHBC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999986179
|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Hypothetical protein TT1467, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=31101.59 Aligned_cols=1 Identities=0% Similarity=0.503 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~lalvlH~HqP~vr~~~~~~~~e~w~~~a~~e~YlPll~~~~~l~~~~~~~k~t~~lsP~LleqL~D~~l~~~f~~~l 80 (412)
T d1ufaa2 1 MARFALVLHAHLPYVRAHGMWPFGEETLYEAMAETYLPLIRVLERLRAEGVEAPFTLGITPILAEQLADARIKEGFWAYA 80 (412)
T ss_dssp CEEEEEEEEECCCCCTTSCSTTTSHHHHHHHHHHTHHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCHHHHHHHHHHH
T ss_conf 96379998257876568987874245999999998888999999998428983399997789999850878888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~r~L~~~G~vEl~~~~y~H~ilpll~~~~~~~~ 160 (412)
T d1ufaa2 81 KDRLERAQGDYQRYRGTALEASARHQVAFWELTLDHFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWA 160 (412)
T ss_dssp HHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHH
T ss_conf 99998750556532340667888888999999999999965458999999997598688835412333321796799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Qi~~~~~~~~~~fG~~P~G~W~~E~a~s~~~l~~~~~~g~~~~~~~gl~~iL~~~Gi~y~~~d~~~l~~~~~~~~~~~~~ 240 (412)
T d1ufaa2 161 QIKTGVSTYRRHFAKDPTGFWLPEMAYRPKGPWKPPVEGPPEGVRPGVDELLMRAGIRYTFVDAHLVQGGEPLSPYGEAA 240 (412)
T ss_dssp HHHHHHHHHHHHHSSCCCBEECGGGCBCCSEEECCSSSSSCCEEECCHHHHHHHTTCCEEEECHHHHHCSCCCCC-----
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
T ss_conf 99999999999759998867674222044113433321442102452889999739978997749985078766555556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~y~~~~~~~~v~~ffRD~~lSd~I~~~~~Gf~~~~~~~e~a~~d~~~~l~~~r~t~~~~~~~~~~~~Dgen 320 (412)
T d1ufaa2 241 LGPVESQEATYHVHELESGLRVLARNPETTLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAEKAPYDPEA 320 (412)
T ss_dssp ---CCCCGGGGSCEECTTSCEEEEBCHHHHHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCEECCCSSCCGGGCEECCHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 67533345650330489738999668777546332326988765356665221334489987113467855361068899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 awe~~~~~a~~Fl~~l~~~~~~~~~~ivv~~~D~ElFGhww~eg~~fL~~l~~~l~~~~~i~~tT~se~l~~p~~~v~lp 400 (412)
T d1ufaa2 321 AFAKTEEHARHFVGLLERLAGRHPEGVILSPYDAELFGHWWYEGVAWLEAVLRLLAQNPKVRPVTAREAVQGPAVRTALP 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHTCSSEEECCHHHHTCSCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCEEECC
T ss_conf 99998977999999999875058887589445588604024310999999999863189839976999982889714258
Q ss_pred -----------C
Q ss_conf -----------6
Q 001706 633 -----------S 633 (1024)
Q Consensus 633 -----------~ 633 (1024)
-
T Consensus 401 ~sSWg~gg~~~v 412 (412)
T d1ufaa2 401 EGSWGRGGDHRV 412 (412)
T ss_dssp SBCSSGGGSSTT
T ss_pred CCCCCCCCCCCC
T ss_conf 988767898889
|
| >d1t3ca_ d.92.1.7 (A:) Botulinum neurotoxin {Clostridium botulinum, serotype E [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype E [TaxId: 1491]
Probab=100.00 E-value=0 Score=31031.76 Aligned_cols=1 Identities=0% Similarity=-0.826 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~InnFNyndPVnn~~I~~~r~~~~~~~~KAFkI~~nIWViPER~~~~t~p~d~~pp~~~~~~d~~yYDpnyLsTD~EKD 80 (411)
T d1t3ca_ 1 PKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKD 80 (411)
T ss_dssp CCCCCCCTTSCCCSSSEEEEECTTCSSCEEEEEEETTEEEEEEECCTTCCGGGGSCSCSTTTTSSCCBCTTTTCSHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
T ss_conf 97666667898899728999448899712435620776875111247778212489732346887513753145621788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~FLk~iIKLf~RINs~~~G~~LL~~Is~aiPf~G~~~t~~~ef~~~~~~~~n~~~s~~~~~~~~~NlvIfGPg~nI~en~ 160 (411)
T d1t3ca_ 81 RFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETN 160 (411)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHTCCCCSCCTTSCTTSCCCCTTTCEEEECTTSCEEEECCSEEEEECCSBTTCCE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCCC
T ss_conf 99999999999863745799999999736875789999853311355430356336885201310269987885425665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~n~~~s~nGfGt~~~i~F~P~~t~~f~~~~~~~F~~DPAl~L~heLIhsLh~LYGIk~i~~~~~i~~~~~~~~ 240 (411)
T d1t3ca_ 161 SSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHQLIHSLHGLYGAKGITTKYTITQKQNPLI 240 (411)
T ss_dssp EEECCCGGGCCGGGTTSCCCEEEECCTTEEEEEECTTSCEEECCHHHHHHHHHHHHHHHHTTCCTTTTTCEECTTTTTCC
T ss_pred CEEEEECCCCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 03787405776322476504799976634786136777714248899999999999987618667887642101000556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~v~~eelltfGG~D~~~I~t~~~~~~~~~~l~~f~~ia~~l~~i~~~n~~~n~yK~~~~~Ky~~~~d~~g~~~vN~ 320 (411)
T d1t3ca_ 241 TNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNI 320 (411)
T ss_dssp SCTTCEEHHHHHHHCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTSCCSCGGGHHHHHHHHHHTTEEECTTSCEEECH
T ss_pred HCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEH
T ss_conf 41477554000300687800048711677999999999999999888627884178999999998577657887288548
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~kF~~~y~~l~~fTE~~~~~~f~v~~r~~Y~~~y~~~~~~nlldd~iYti~eGFNi~nl~~n~~GQN~~~N~~~~~~i~~ 400 (411)
T d1t3ca_ 321 NKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITG 400 (411)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHTCCCCSCSCSCCCEEEESCTTCTTTCBTTTBTCCGGGGGGGGGGBTTTSGGGEECCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99999999986223344668886887776886357632255467653221467433432001367653238465346785
Q ss_pred ----------C
Q ss_conf ----------6
Q 001706 633 ----------S 633 (1024)
Q Consensus 633 ----------~ 633 (1024)
.
T Consensus 401 ~glv~~~~~~C 411 (411)
T d1t3ca_ 401 RGLVKKIIRFC 411 (411)
T ss_dssp TTHHHHHSSCC
T ss_pred CHHHHHHHHCC
T ss_conf 20588776339
|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: Putative NAG isomerase YihS species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31030.57 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~r~wL~~~~~~l~~~~~~~~~~gGF~~l~~dG~~~~~~~k~~~~~aR~~~~fs~a~~~g~~~~~~~A~~g~~f 80 (411)
T d2afaa1 1 KWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKA 80 (411)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHGGGEETTEECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 97687777899999999999864617789972346899897888772147768999999999975897799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 L~~~~~d~~~Gg~~~~~~~~~~~d~~k~~Y~~AF~l~ala~~~~~g~~~~~~~a~~~~~~l~~~~~~~~~G~~~~~~~~~ 160 (411)
T d2afaa1 81 MNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA 160 (411)
T ss_dssp TTTTTBCTTTSSBCSEECSSSEEECCEEHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 99856767998489862699986532104889999999999988588889999999999999996075689743220555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~n~~mhl~eA~~~l~~at~d~~~~~~a~~~~~~~~~~~~~~~~~~l~E~f~~dw~~~~~~~~~~~~~~~~~ 240 (411)
T d2afaa1 161 FSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRA 240 (411)
T ss_dssp SCCBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTCCBCTTTTTTCTTCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 67754424467448999999999884288999999999999888765156678411112666541443301264324564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~pGH~iE~aWlll~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~d~~gg~~~~~~~~g~~~~~~k~~W~qaEa 320 (411)
T d2afaa1 241 YGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEA 320 (411)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSSCCEEHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 33474138899999999999973134567299999999999999985726578980584015899967777455599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 i~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D~~~G~W~~~l~~~g~p~~~~~~g~~~~yH~~~a~~~~~~~~~~~~~~ 400 (411)
T d2afaa1 321 MGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAP 400 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCSEECTTSCBCC----CCCCCTTTHHHHTGGGSCSSSCHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99999999866989999999999999998687999983464589997998888999987206999998615889974218
Q ss_pred ----------C
Q ss_conf ----------6
Q 001706 633 ----------S 633 (1024)
Q Consensus 633 ----------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~~~ 411 (411)
T d2afaa1 401 AVAAGLLDINA 411 (411)
T ss_dssp HHHTTCTTTTC
T ss_pred HHHCCCCCCCC
T ss_conf 88701346689
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Bni1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31028.15 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~PkP~~klK~l~W~ki~~~~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~~~~~~~~~~~~~lLd~kr~qni 80 (411)
T d1ux5a_ 1 KYPRPHKKLKQLHWEKLDCTDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCCCSSCBCCCCCCCCSSCCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 96989999989776159998988200204410036788663099999986447777776666666662001767899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d~~~L~~ 160 (411)
T d1ux5a_ 81 GINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQR 160 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCH
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCH
T ss_conf 89998706999999999998368542487899999830210134799999817993789999999851445478454387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~~~A~GF 240 (411)
T d1ux5a_ 161 ADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGF 240 (411)
T ss_dssp HHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999862334499999999999999999999999999999999999957679999999999860625899871235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 kL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~ 320 (411)
T d1ux5a_ 241 KLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLS 320 (411)
T ss_dssp CGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTT
T ss_pred EHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 23898876521179998018999999999869075332877888998861899999999999999999999999862025
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~~~~~~~~fF~~~~~F~~~~~~a~~en~~ 400 (411)
T d1ux5a_ 321 DSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLA 400 (411)
T ss_dssp CTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40002511169999999999999999999999999999999999983899888789999999999999999999999999
Q ss_pred ----------C
Q ss_conf ----------6
Q 001706 633 ----------S 633 (1024)
Q Consensus 633 ----------~ 633 (1024)
.
T Consensus 401 ~~e~e~~~~k~ 411 (411)
T d1ux5a_ 401 AEEEERLYIKH 411 (411)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
T ss_conf 99999987209
|
| >d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome p450 152a1 (Bs-beta) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=31022.95 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~~~~~~~~l~~~~~~~~f~~~~~~kyg~~if~~~~~g~~~vvv~~pe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (411)
T d1izoa_ 1 PHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQ 80 (411)
T ss_dssp CBCCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCC
T ss_conf 98997014999997799999999999799769999889528999799999999769997113777287777644899645
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~dg~~h~~~R~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~l~~~v~~~~~g~~~~~~~~~~~~~~ 160 (411)
T d1izoa_ 81 GMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADD 160 (411)
T ss_dssp GCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 77808999999999873199999999999999999999985425751299999999998888874887647999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~k~~~a~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ag~~ 240 (411)
T d1izoa_ 161 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV 240 (411)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999876321310399999999999999999998621224586322899999986751775311013456665320332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 tts~~l~~~l~~L~~~P~vq~kl~~e~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ipkgt~V~~~~~~~~~dp 320 (411)
T d1izoa_ 241 AISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP 320 (411)
T ss_dssp THHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 30288999999987310123221001330499999999986503322344333334431043464221101355530442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~p~~F~PeR~~~~~~~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~ 400 (411)
T d1izoa_ 321 RLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE 400 (411)
T ss_dssp TTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC
T ss_conf 00899562186535899999776479899899988088439999999999999999826898179986887255377568
Q ss_pred ----------C
Q ss_conf ----------6
Q 001706 633 ----------S 633 (1024)
Q Consensus 633 ----------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~Rr 411 (411)
T d1izoa_ 401 SGFVMSGIRRK 411 (411)
T ss_dssp TCCEEEEEEEC
T ss_pred CCCEEEEEECC
T ss_conf 99079988693
|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=30958.04 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~wwp~~~~~~~l~~~~~~~~p~~~~f~y~~~~~~ld~~a~~~d~~~l~~~s~~wwpaD~G~ygP~lVRl 80 (410)
T d2ccaa1 1 MKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRM 80 (410)
T ss_dssp CCCGGGTCCGGGTSTTCCCGGGGSCSCGGGCTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 98987899766628644587555148877899999862899986269999999999998544335765456633001100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 AWHsAGTYR~~DgRGGanGg~iRfaPe~sWp~N~~LdkAr~LL~piK~ky~~~iS~ADLi~LAG~vAiE~mGg~~i~f~~ 160 (410)
T d2ccaa1 81 AWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGF 160 (410)
T ss_dssp HHHHHTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHTTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCB
T ss_pred HHHHHCEEECCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECCEECCCCCCCCC
T ss_conf 22331301212677899877466541115312231899999988888760546567660336350210141255112455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 GR~D~~~~~~~~~g~~~~~~~~~R~~~~~el~d~l~~~~m~li~~np~g~~g~pd~~~~a~~lRd~f~rMglnD~E~VAL 240 (410)
T d2ccaa1 161 GRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAAL 240 (410)
T ss_dssp CCCCCSSCCCCCCCSCSSTTCCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 54435544200378866377899857632456754444458767787534689871017999999998706871766533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 iaGgHtlGk~Hg~~~~~~~g~~p~~a~~~~~G~g~~~~~~~~~~~~~~~sG~eg~WT~~P~~~dN~yF~~Ll~~~we~~k 320 (410)
T d2ccaa1 241 IVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTK 320 (410)
T ss_dssp HHHHHTSCCCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEE
T ss_pred HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECC
T ss_conf 12421113346788734257784658702157755688787778555367865547668514535777541356515214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 sp~g~~qw~~~d~~~~~~~pda~~~~~~~~~ml~tDlaL~~Dp~~r~iae~ya~d~d~F~~dFa~AW~KL~hrDmgp~~r 400 (410)
T d2ccaa1 321 SPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVAR 400 (410)
T ss_dssp CTTSCEEEEEGGGTTTTCBCCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGG
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 45655310355777777777776776678764226677520987899999997099999999999999986125796342
Q ss_pred ---------C
Q ss_conf ---------6
Q 001706 633 ---------S 633 (1024)
Q Consensus 633 ---------~ 633 (1024)
.
T Consensus 401 ~~g~~~p~e~ 410 (410)
T d2ccaa1 401 YLGPLVPKQT 410 (410)
T ss_dssp CBSTTCCSCC
T ss_pred CCCCCCCCCC
T ss_conf 0689999889
|
| >d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30953.65 Aligned_cols=1 Identities=100% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~v~s~~~~y~~~~i~~~y~y~~t~v~~~~~g~~~v~p~~~~~~f~t~~~~p~klGVmlVG~GGnngTT~~aGv~An 80 (410)
T d1p1ja1 1 ITSVKVVTDKCTYKDNELLTKYSYENAVVTKTASGRFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLAN 80 (410)
T ss_dssp CCEEEECCTTEEEETTEEEEEEEEEEEEEEECTTSEEEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCCEEEECCCEEECCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 96569828980773411799988510389976897089987567789994256786478998417852899999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 k~gl~w~tk~G~~~pny~GSltq~stirlG~~~~g~~~~~p~kd~lPl~~p~DiVfGGWDI~~~nl~eAa~rA~VLd~~l 160 (410)
T d1p1ja1 81 KHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDL 160 (410)
T ss_dssp HTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEECSSCCCHHHHHHHHTCSCHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHH
T ss_conf 62786333556546763230210031431455788845663776188898412789245699988999998769999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~ql~~~L~~i~P~psV~~~dfiaanq~~ra~nvi~~d~~~~~~~~sk~e~ve~Ir~DIr~Fk~~n~lDrVVVlWtASTE 240 (410)
T d1p1ja1 161 QQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTANTE 240 (410)
T ss_dssp HHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHHHHHHHTTCSCEEEEECSCCC
T ss_pred HHHHHHHHHCCCCCCCEECCHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999998638634320060555212112102322456545546655899999999999999987389748999458887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~~~~~p~v~~t~e~l~~ai~~n~~eIsPS~lYA~AAI~eG~pyvNgsPq~t~vPal~eLA~~~gv~iaG~DfKdslLA~ 320 (410)
T d1p1ja1 241 RYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKDSLLAT 320 (410)
T ss_dssp CCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 68888832124399999887559987787999999999739984468864456579999984279458715124322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 pli~dL~vl~e~~trI~~~~dg~vl~d~~~f~~~~~Vls~Lsyl~KAPl~p~g~~vvnal~~Qr~~len~~ra~~Gl~p~ 400 (410)
T d1p1ja1 321 PLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQ 400 (410)
T ss_dssp HHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999887650368621765457622162153089898887538989999965016888999999999997289986
Q ss_pred ---------C
Q ss_conf ---------6
Q 001706 633 ---------S 633 (1024)
Q Consensus 633 ---------~ 633 (1024)
-
T Consensus 401 ~~m~le~~l~ 410 (410)
T d1p1ja1 401 NELRFEERLL 410 (410)
T ss_dssp CCCCHHHHCC
T ss_pred CCCEEEEECC
T ss_conf 6651146329
|
| >d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30952.30 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~g~~~~~~~iE~~~~~~la~Me~~Gi~vD~e~l~~~~~~~~~~~~~l~~~~~~~~g~~fn~~S~~ql~~~Lf~~lgl~~ 80 (410)
T d1kfsa2 1 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 80 (410)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCBCBCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCSCTTTTSHHHHTTTSSCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99689999999988999999999739898899999999999999999999999995990899999999999997429998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~t~~g~~~t~~~~L~~~~~~~~~~~~l~~~r~~~k~~~~~~~~~~~~~~~~~gri~~~~~~~gt~TGR~s~s~pnlQn 160 (410)
T d1kfsa2 81 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQN 160 (410)
T ss_dssp CCCCC----TTTCCHHHHHTTTCHHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSSBCCEEESSCCSSSCCEEESSCGGG
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
T ss_conf 76478898554055410112223899999999999999887652433125778995412575124200232136863035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~P~~~~~~~~iR~~fia~~G~~lv~~D~sqiE~Rv~A~ls~D~~l~~~~~~g~D~h~~~A~~~~~~~~~~~~~~~R~~aK 240 (410)
T d1kfsa2 161 IPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 240 (410)
T ss_dssp SCSSSHHHHHHHTTBBCCTTEEEEEEEETTHHHHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHTTCCTTTCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHEEECCCCCEEEEECHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHH
T ss_conf 78887423255632736999779985545384443444676224788885265067641999819973210220043320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~g~~YG~G~~~la~~l~~s~~eA~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~v~t~~Grr~~~~~~~~~~~~~r~~ 320 (410)
T d1kfsa2 241 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 320 (410)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCTTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECTTTTCSSHHHHHH
T ss_pred HEEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 31230141356778998809899999999999988787846899999999997595530368503699754405878888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~r~a~N~~iQg~aadi~k~a~~~i~~~l~~~~~~~~~v~~VHDEiv~ev~~~~~~~~~~~i~~~M~~~~~~~vPl~~e~ 400 (410)
T d1kfsa2 321 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 400 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEETTEEEEEEETTTHHHHHHHHHHHHHHSSCSSSCCCEEE
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 88888652013389999999999999999852899889998453258998389999999999999846456898468320
Q ss_pred ---------C
Q ss_conf ---------6
Q 001706 633 ---------S 633 (1024)
Q Consensus 633 ---------~ 633 (1024)
-
T Consensus 401 ~~g~~w~e~h 410 (410)
T d1kfsa2 401 GSGENWDQAH 410 (410)
T ss_dssp EEESBHHHHC
T ss_pred CCCCCHHHHC
T ss_conf 5628868829
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=0 Score=30951.48 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~ 80 (410)
T d1uuqa_ 1 EHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG 80 (410)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99879989999999989999999317765566567879999999999999977995999687366545555568776554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1uuqa_ 81 FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQE 160 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 33245889999999999999739856874034556657754465312477767655555553335665300368999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~ 240 (410)
T d1uuqa_ 161 YRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGS 240 (410)
T ss_dssp HHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 99999999986546666765577067666533665776676543320346677777775455408995576424566666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~ 320 (410)
T d1uuqa_ 241 VNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYA 320 (410)
T ss_dssp TTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCGGGCCC
T ss_pred CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 44321013440477655688612754446555433322222015666778888888876249976650255656788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~d~~~~~~ 400 (410)
T d1uuqa_ 321 MDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAI 400 (410)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSCEETTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 76468999999999999999999828998999995416878888887778779987798985347348998899748899
Q ss_pred ---------C
Q ss_conf ---------6
Q 001706 633 ---------S 633 (1024)
Q Consensus 633 ---------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~~ 410 (410)
T d1uuqa_ 401 MKEFNARFQP 410 (410)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHCCC
T ss_conf 9999974197
|
| >d1s5ja1 c.55.3.5 (A:40-449) Exonuclease domain of family B DNA polymerases {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=30950.87 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~ll~~~Y~~~~~~~vi~~~g~~~~~~~v~~~~~gf~PYFyv~~~~~~~~~~~~~~~~~~~~~~e~v~k 80 (410)
T d1s5ja1 1 EWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDKETQKIYALYDNTGHKPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSK 80 (410)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTTTEEEEEEEETTTTEEEEEECCSCCCCEEEESSCHHHHTTCHHHHTCTTEEEEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 97655456875899986886329989999974269938999968896530899888216899998764236561799997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~ki~~~~p~~v~~~r~~~~~~~EadI~~~~RfliD~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1s5ja1 81 IDPYTWNKFKLTKIVVRDPLAVRRLRNDVPKAYEAHIKYFNNYMYDIGLIPGMPYVVKNGKLESVYLSLDEKDVEEIKKA 160 (410)
T ss_dssp ECTTTCCEEEEEEEEESSHHHHHHHTTSSSCEESCSSCHHHHHHHHHTCCTTSEEEEETTEEEECCCCCCHHHHHHHHHH
T ss_pred EECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 71237853069999982899999999874654013668421179994886635899558743334555672011010133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~lsfDIE~~~~~~~~fP~p~~~~~~ii~I~~~~~~~~~~v~~~~~~~~~~~~~ 240 (410)
T d1s5ja1 161 FADSDEMTRQMAVDWLPIFETEIPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSV 240 (410)
T ss_dssp TTTSCHHHHHHHHHHTHHHHSCCCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEEEEECSSCCCCCCE
T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 34443000000011354333689984199999997878889897953367549999998165878999981677766544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~v~~~~sE~eLL~~F~~~i~dpDii~GyN~~~FD~pyL~~Ra~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (410)
T d1s5ja1 241 KLDGISVERFNTEYELLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKF 320 (410)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHTTCSEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEECCE
T ss_conf 67980999978999999998754316666898435688689999999995996321531104741016855458976062
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~d~~~~~~~~~~l~sy~Ld~Va~~~Lg~~K~d~~~~~~~~~~~~l~~Y~~~D~~L~~~L~~~~~~~~l~~~~~~s~i~ 400 (410)
T d1s5ja1 321 FFNKAVRNYAFEGKYNEYNLDAVAKALLGTSKVKVDTLISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRIS 400 (410)
T ss_dssp HTSHHHHHHTSTTCCSSCSHHHHHHHHHCCCCC--SSCTTTCCHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62148998752358788987999999869695567776565897999886099999999998652588899999999985
Q ss_pred ---------C
Q ss_conf ---------6
Q 001706 633 ---------S 633 (1024)
Q Consensus 633 ---------~ 633 (1024)
+
T Consensus 401 ~~plddv~r~ 410 (410)
T d1s5ja1 401 RLGIEELTRT 410 (410)
T ss_dssp CCCHHHHTTS
T ss_pred CCCHHHCCCC
T ss_conf 9798980479
|
| >d2cmza1 e.76.1.2 (A:1-409) Spike glycoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Viral glycoprotein ectodomain-like superfamily: Viral glycoprotein ectodomain-like family: Spike glycoprotein-like domain: Spike glycoprotein species: Vesicular stomatitis indiana virus [TaxId: 11277]
Probab=100.00 E-value=0 Score=30880.25 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~iv~p~~~~~~W~~v~~~~l~CP~~~~~~~~~~~~~~~~~~~~p~~~t~~kv~G~~Chk~~w~ttC~~~wyg~~~it~ 80 (409)
T d2cmza1 1 KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTAIQVKMPKSHKAIQADGWMCHASKWVTTCDFRWYGPKYITQ 80 (409)
T ss_dssp CEEEEEECSCCCCCEECCTTCCCCGGGGCTTTCCSCEEEEEEEEEECCCSCCEECEEEEEEEEEEEEEEECTTSCEEEEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCEEEEEEEEEEEEEEEEECCEEEEE
T ss_conf 97689168888888237711244999745467786245558998103566336552798655899998746307558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~i~~~~pt~~~C~~ai~~~~~G~~~~p~fPp~~C~w~tv~t~e~~~i~i~ph~V~lDpY~~~~~D~~F~gGkCs~~~C~T 160 (409)
T d2cmza1 81 SIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVTDAEAVIVQVTPHHVLVDEYTGEWVDSQFINGKCSNYICPT 160 (409)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTCCCCCCSCCCCCCTTSEEEEEEEEEEEEECCEEEETTTTEEECTTBGGGEECSSEEEB
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCC
T ss_conf 99974499899999998876587258989985515631211037999996455325377882746757999668970677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~h~~tiWi~d~~~~~~C~~~~~~~~i~~~~~~gk~~s~g~~~~g~~~~~~~~~~~~gACkl~fCG~~GIRl~~GeWv~i~ 240 (409)
T d2cmza1 161 VHNSTTWHSDYKVKGLCDSNLISMDITFFSEDGELSSLGKEGTGFRSNYFAYETGGKACKMQYCKHWGVRLPSGVWFEMA 240 (409)
T ss_dssp SSSSCEEEESSCHHHHHGGGEEEEEEEEEESSCCGGGTTCSSCEEEETTEEEEECTTCEEEEETTEEEEECTTSBEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCEEEEE
T ss_conf 67861661577666501355301211684255600014653038983785545778831254348754687798589986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~p~C~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~Cl~tl~ki~~~~~iS~~dLSyL~p~~PG~G~AY~i~n 320 (409)
T d2cmza1 241 DKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILDYSLCQETWSKIRAGLPISPVDLSYLAPKNPGTGPAFTIIN 320 (409)
T ss_dssp CHHHHHHTTCCBCCTTCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHTTSCCSSEEEEEEEEET
T ss_pred CCCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 66641002577799998655036775166778999877879998999999974798775555420567999864379989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 gtL~~~~~~Y~~v~~~~~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~G~NG~~~~~~~~~~p~~~~~~~~~d~~l~~~~ 400 (409)
T d2cmza1 321 GTLKYFETRYIRVDIAAPILSRMVGMISGTTTERELWDDWAPYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSS 400 (409)
T ss_dssp TEEEEEEEEEEEEEESSSEESSSEEEETTSCCEEECCCCCEEETTEEECGGGCEEETTEEECCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCEEEEECCEEEECHHHHCCCCHHHHHHHHH
T ss_conf 94897668999998226653332564477774542244646868844466526985994895656711520034444440
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
-
T Consensus 401 ~~~~~~HPh 409 (409)
T d2cmza1 401 KAQVFEHPH 409 (409)
T ss_dssp CCEECCCCC
T ss_pred CCCCCCCCC
T ss_conf 267678999
|
| >d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Plasmodium falciparum [TaxId: 5833]
Probab=100.00 E-value=0 Score=30878.10 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~y~~~~~~~l~~l~pe~ah~~~~~~l~~~~~~~~~~~~~~~L~~~v~Gl~f~NPiglAAG~dk~~~~i~~~ 80 (409)
T d1tv5a1 1 FESYNPEFFLYDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGFDKNGVCIDSI 80 (409)
T ss_dssp CCTTSTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTTTTTCSSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHH
T ss_conf 98778326789999999852599899999999999735777534677744466788764489687560668788999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~lGfG~ve~gTvT~~p~~GNp~PR~~r~~~~~~liN~~Gl~n~G~~~~~~~l~~~~~~~~~~~~~~~~i~gi~~~~~~~ 160 (409)
T d1tv5a1 81 LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKD 160 (409)
T ss_dssp HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTT
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 86688769951023035647897322345433321024677763589999987777654430566654300231454420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~aD~~elNiScPNt~glr~~~~~~~L~~ll~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
T d1tv5a1 161 TVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKN 240 (409)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 15788877999998850143100010265433442456889999999999999875301222221111111001111000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppi~vKlsPd~~~~~i~~i~~~~~~~g~dgii~~Nt~~~~~~~~~~~~~~GGlS 320 (409)
T d1tv5a1 241 NFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 320 (409)
T ss_dssp ----------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11222222110000000110123567865998589987024688999988606541011322225555334234677643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 G~~l~~~al~~v~~v~~~~~~~ipIIGvGGI~s~~Da~e~i~AGAs~VQv~T~li~~Gp~~v~~I~~~L~~~l~~~g~~~ 400 (409)
T d1tv5a1 321 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYN 400 (409)
T ss_dssp EHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 10178899999999999708996099989979999999999849978763067871192899999999999999829998
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
.
T Consensus 401 i~e~iG~~h 409 (409)
T d1tv5a1 401 LKEAIGRKH 409 (409)
T ss_dssp SGGGTTTTC
T ss_pred HHHHCCCCC
T ss_conf 999539889
|
| >d1qtma2 e.8.1.1 (A:423-831) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Thermus aquaticus [TaxId: 271]
Probab=100.00 E-value=0 Score=30877.13 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~l~~~y~~lE~~l~~vl~~me~~Gi~vD~~~l~~~~~~~~~~~~~l~~~~~~~~g~~fN~~S~~ql~~~L~~~l~l~~ 80 (409)
T d1qtma2 1 EERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPA 80 (409)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 90789999999968999999999729284899999999999999999999999995991899999999999999739997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~g~~~~~~~~l~~l~~~~~~~~~~~~~~~~~kl~~~~~~~~~~~~~~~~grih~~~~~~gt~TGR~ss~~pnlq 160 (409)
T d1qtma2 81 IGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQ 160 (409)
T ss_dssp CCBCTTTCCBCCCHHHHHHTTTTCTHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSEECCEEESSCCSSSCCEEESSCCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 66656678755323368887421168999999889988888878778775038899163144556666665466650120
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~p~~~~~~~~~R~~f~a~~G~~lv~aD~sqiElRvlA~ls~D~~l~~~~~~g~D~~~~~a~~~~~~~~~~v~~~~R~~a 240 (409)
T d1qtma2 161 NIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAA 240 (409)
T ss_dssp SCCCSSHHHHHHHTTEECCTTEEEEEEEETTHHHHHHHHHHCCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHCCCCCEEECHHHHHHH
T ss_conf 25410014454100555789968998530236324688860674411110157620101012212764223140676667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 K~~~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~v~t~~Gr~~~~~~~~~~~~~~~~ 320 (409)
T d1qtma2 241 KTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRE 320 (409)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSCHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 76410123576334566665442778999999998864235677788999887627233235653332100001254432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~N~~iQg~aAdi~k~a~~~~~~~l~~~~~~iv~~VHDEiv~ev~~~~a~~~~~~i~~~M~~~~~l~vPl~~e~~ 400 (409)
T d1qtma2 321 AAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVG 400 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEEEEEEETTTHHHHHHHHHHHHHTSSCCSSCCCEEEE
T ss_pred HHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 20200121320399999999999999999886699899974413499987789999999999998603268997786621
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
.
T Consensus 401 ig~~W~e~k 409 (409)
T d1qtma2 401 IGEDWLSAK 409 (409)
T ss_dssp EESBHHHHC
T ss_pred ECCCHHHCC
T ss_conf 558967749
|
| >d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: LanC-like family: LanC-like domain: Nisin biosynthesis protein NisC species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30875.47 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~sLy~G~~GiaL~l~~l~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~g 80 (409)
T d2g0da1 1 KKNIKRNVEKIIAQWDERTRKNKENFDFGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGS 80 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC-----CGGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 95188999999985566530365569989983238779999999999886498789999999999999998607998863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lf~G~~Gi~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~D~l~G~aG~~~~LL~~~~~~~~~~~~ 160 (409)
T d2g0da1 81 LYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLINDEQYDDLKI 160 (409)
T ss_dssp TTTSHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCCCGGGHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf 00787999999999986050356899999999999999999874402367766212226188999999833222407899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~sGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (409)
T d2g0da1 161 LIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYE 240 (409)
T ss_dssp HHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999997413554333454445552200036778776426550799999999998843788218999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~la~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (409)
T d2g0da1 241 KFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDS 320 (409)
T ss_dssp HHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98642335688987676531123334456766655437884679999999998719889999999999999983548998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~LCHG~aG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGi~~~Ll~~~~~~~~~~W~~~~L 400 (409)
T d2g0da1 321 YMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVLSKFEYSINFTYWRQALL 400 (409)
T ss_dssp CCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHHHSCCSTTCSSTTTSHHHHHHHHHHHHSCCCSSCGGGGGT
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHC
T ss_conf 93568689999999999988488799999999999888743467899997244169999999998268999987112110
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~~ 409 (409)
T d2g0da1 401 LFDDFLKGG 409 (409)
T ss_dssp CCTTTTTCC
T ss_pred CCCCCCCCC
T ss_conf 456234488
|
| >d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Formaldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=30874.22 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 D~e~~~~~~~~~~~~i~~~~~~~~~~~~GT~~~~~~~~~~g~lP~rNf~~g~~~~a~~isge~~~~~~~~~~~C~~Cpi~ 80 (409)
T d1b25a1 1 DKEELKKLSQEAYNEILNSPGYPFWKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEGMKVQQRGCPYCNMP 80 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTHHHHHHHGGGGHHHHHHHTTCSCBTTTTBSCCTTGGGGSHHHHHHHEEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999999999999987194176788368599999998759968177878878873445899998775127888999678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 C~~~~~~~~g~~~gpEYEt~~~~Gs~~gi~D~~~v~~~n~lcd~~GlDtIs~G~~ia~amE~~e~Gll~~~~~~Gd~e~~ 160 (409)
T d1b25a1 81 CGNVVLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILKEGPTFGDFKGA 160 (409)
T ss_dssp CEEEEECTTSCEEEECHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSSSSCCTTCHHHH
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88358728987078536479887660289999999999999998687456450599999999977999866667886999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~ll~~Ia~r~GeiG~~La~G~~~aae~~G~~~~a~~vKG~e~p~~dpR~~~g~~l~yats~rGa~H~~~~~~~~~~~~~ 240 (409)
T d1b25a1 161 KQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTA 240 (409)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCHHHHHHHHTCGGGCCEETTEECCSCCCTTCHHHHHHHHHCTTSSCSTTCCCHHHHHTCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
T ss_conf 99999998667857899973399999994982321020777666527763024666551246787045533220331357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dslg~C~F~~~~~~~~~e~~~~~l~avTG~~~t~eel~~~GeRi~ 320 (409)
T d1b25a1 241 PIEGEKAEKVEYKISYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVTYTWDDLYKAADRVY 320 (409)
T ss_dssp TTC--------CCCCCCTHHHHHHHHHHHHHTTHHHHHTCCSHHHHHHCCCTTHHHHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 41110123312345678078999999999999999860404552214577899999999984388999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~L~R~fN~r~G~~~~~~~dD~lP~r~~~ep~~~Gp~~G~~~d~~~~e~~l~~YY~~rGWde~G~Pt~e~L~~LgL~~v~~ 400 (409)
T d1b25a1 321 SLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSEYYRIRGWDERGIPKKETLKELDLDFVIP 400 (409)
T ss_dssp HHHHHHHHHHTTTCCCGGGGCCCTHHHHCCCSSSTTTTCCCCHHHHHHHHHHHHHHHTBCTTSCBCHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHH
T ss_conf 99999998606679983427797154118887787578868999999999999997399988846999999879966899
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
.
T Consensus 401 ~l~~~~~~~ 409 (409)
T d1b25a1 401 ELEKVTNLE 409 (409)
T ss_dssp HHHTTSCCC
T ss_pred HHHHHHCCC
T ss_conf 999986169
|
| >d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini [TaxId: 2094]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Mycoplasma arginini [TaxId: 2094]
Probab=100.00 E-value=0 Score=30872.90 Aligned_cols=1 Identities=0% Similarity=-1.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~v~SE~g~Lk~V~vhrPg~e~~~l~P~~~~~~lfd~~~~~~~a~~Ehd~f~~~L~~~Gv~V~~l~~ll~e 80 (409)
T d1s9ra_ 1 SVFDSKFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAE 80 (409)
T ss_dssp CCSCTTCCSCBBCCSSSCEEEEEECCCCGGGGGCCGGGHHHHTCSSCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
T ss_conf 93113778641577700131799769848987269311577514777799999999999999999789889983786876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~g~~~~e~~~~~~~~~~~~plpn~~F~RD 160 (409)
T d1s9ra_ 81 TYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRD 160 (409)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHTCSSHHHHHHHHHHCEEHHHHTCCCSSSEEECCCGGGGCTTS
T ss_pred HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHCCC
T ss_conf 55407999999999863101134454768888999986048889999988524515442555676334678755200057
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~gvil~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~EGGD~l~~g~~~~~iG~s~RTn~~gie~L 240 (409)
T d1s9ra_ 161 PFASVGNGVTIHYMRYKVRQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTDLQTVTLL 240 (409)
T ss_dssp SEEEEBTEEEECCCSSHHHHTTHHHHHHHHHHCTTTTTCCEEECGGGCSCCCGGGEEECSSSEEEEEESSSCCHHHHHHH
T ss_pred CEEEECCCEEECCCCCHHHCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHH
T ss_conf 43687486897899984665477999999984844349855972687664556747998996799997876798999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~L~~~~~~~~~~v~~~~~p~~~~~mHLDt~f~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (409)
T d1s9ra_ 241 AKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQS 320 (409)
T ss_dssp HHHHHHCTTCCCCEEEEEECCCBTTBCSGGGTEEECSSSEEEECGGGTTTCEEEEEETTTSCSSCCCEEECCCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99863447712689875047886552233560243279849982543564220012203676654101210338999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~i~~~~~~~~~~~~~~E~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gievi~i~~~el~~~gGg~hCmT~ 400 (409)
T d1s9ra_ 321 IINKKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEKTNAALEAAGIKVLPFHGNQLSLGMGNARCMSM 400 (409)
T ss_dssp HHSSCCEEEETTCTTCCHHHHHHHHHTTTTCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCHHHHTTSCCTTTTCE
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCEECCC
T ss_conf 74799808984688764566655540574049997799899858869999999978899999673785327998777870
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
-
T Consensus 401 pl~Re~v~~ 409 (409)
T d1s9ra_ 401 PLSRKDVKW 409 (409)
T ss_dssp EEEECCCCC
T ss_pred CCEECCCCC
T ss_conf 345279899
|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30868.97 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~~L~~V~il~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~G~LT~~G~~q~~~lG~~lr~~Y~~~~~~~~~~~~~~~ 80 (409)
T d1dkla_ 1 SEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSG 80 (409)
T ss_dssp CCSCEEEEEEEEEEECCCBCCCCCCHHHHHTCSSCCCCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCCTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99888898999997188899999866557688433557999930526999999999999999998774367887778712
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~i~vrSt~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1dkla_ 81 QVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQT 160 (409)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHHSTTCCCCEECCSCTTSCCGGGCTTTTTSSCCCHHHHHHHHHHHTTSSHHHHHHTTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 06987279729999999999852788676655445556667566777577667536777789987745647778899889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~p~~~~~~~~~ 240 (409)
T d1dkla_ 161 AFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSH 240 (409)
T ss_dssp HHHHHHHHHTGGGSHHHHTC-----CCCHHHHSCCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCSSGGGGTCCSHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHH
T ss_conf 99999999721121037877510037889999899988640477767726667659999999998599972110357799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~k~~l~s~HD~ti~~ll~aLgl~~~~~ 320 (409)
T d1dkla_ 241 QWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLP 320 (409)
T ss_dssp HHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHSCCCCEECGGGCEESCSEEEEEECHHHHHHHHHHHTCCCCBT
T ss_pred HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf 99999999998650005887899873668999999999876404555678888638999568414999999819853456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~p~as~~~~El~~~~~~~~~~vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~~~C~l~~F~~~~~ 400 (409)
T d1dkla_ 321 GQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVN 400 (409)
T ss_dssp TBSCSSCTTCEEEEEEEEETTTTEEEEEEEEEECCHHHHHTTCCCCSSSCCEEEECCCTTCCCBCTTSCEEHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66899997663899999846999725999995376201245665201025775046479998889999368999999999
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
=
T Consensus 401 ~~~~p~c~~ 409 (409)
T d1dkla_ 401 EARIPACSL 409 (409)
T ss_dssp HHSCGGGCC
T ss_pred HHHHHHCCC
T ss_conf 775021279
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=100.00 E-value=0 Score=30871.90 Aligned_cols=1 Identities=0% Similarity=0.835 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~k~~v~Y~~~~~~f~d~~~~~~Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~ 80 (409)
T d1wzaa2 1 FEKHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGT 80 (409)
T ss_dssp CCCCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCC
T ss_pred CCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98761799996412137999987489999975533210022277616866799798887989888684567875834599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~dlk~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1wzaa2 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGY 160 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999866988998213344445673123331146553345322356444567654579853322346664466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~dln~~n~~vr~~~~~~~~~wi~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (409)
T d1wzaa2 161 FWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDISET 240 (409)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 77887620325689999999999999982987212253532166032020068999999740037880799986037521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~r~~~~~~~~~~~~~~ 320 (409)
T d1wzaa2 241 VAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHDQNRILDQLGQDRNKARV 320 (409)
T ss_dssp HGGGGTTTCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHTCTTSCCCBCBSCCTTSCCHHHHTTTCHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 13444202232012468999988774167521678877777766543002456556312455567310002786678999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~lt~pG~P~iy~G~E~G~~~~~~~~~~R~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~Li~l 400 (409)
T d1wzaa2 321 AASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFTSVEQEEKNLDSLLNHYRRLIHF 400 (409)
T ss_dssp HHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTCCHHHHTTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999838998799558653766899986546788777788888776775555655468998863748999999999999
Q ss_pred --------C
Q ss_conf --------6
Q 001706 633 --------S 633 (1024)
Q Consensus 633 --------~ 633 (1024)
+
T Consensus 401 Rk~~pal~s 409 (409)
T d1wzaa2 401 RNENPVFYT 409 (409)
T ss_dssp HHHCTHHHH
T ss_pred HHHCCHHCC
T ss_conf 960813039
|
| >d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Family 10 polysaccharide lyase family: Family 10 polysaccharide lyase domain: Polygalacturonic acid lyase (pectate lyase) species: Azospirillum irakense [TaxId: 34011]
Probab=100.00 E-value=0 Score=30802.39 Aligned_cols=1 Identities=100% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~a~~~t~ar~~~~p~~~~aAw~~y~a~s~~~~~a~~~~~~a~~~~g~~~p~~p~~~~~~~~~~l~~~~~wy~s 80 (408)
T d1r76a_ 1 AVIGMNEAASALTPSRVSSLPDTQRAAWQEYLARSEAQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDKPAAWYTS 80 (408)
T ss_dssp CCCEECCCCCCCCHHHHSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSSCGGGGGS
T ss_pred CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 95554541011687776369878888986436665556766776666653248878999986643033671467444577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~eA~~iAd~lL~~Q~p~GGWpKn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TiDN~aTt~el~~La~ 160 (408)
T d1r76a_ 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 79999999999853447998776653200110102232210134455300144555542246788686248999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~y~~a~~~~~~~ll~~Q~~~Ggwpqf~p~~~~Y~~~ItfND~~m~~~l~~l~~~~~~~~~~~~~~~~~r 240 (408)
T d1r76a_ 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99973763214699999999999997317799964437887552343112755899799999999973465344787889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~r~~~a~~rgi~~ll~~Q~~~gg~~~~Wg~Qhd~~tl~P~~aR~yE~~sls~~eS~~i~~~LM~~~~ps~~~~~aI~~av 320 (408)
T d1r76a_ 241 TRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQAIRGGV 320 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999987610488867486525835567344336677264003189999999717777755999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~lwaRfyel~tn~P~f~~Rd~~~~~~~~ei~~err~gy~w~~~~~~~~~~~ 400 (408)
T d1r76a_ 321 AWLNTSVIRDRAWVKSDQGYQLVTEQGAKPLWSRFYSLDGNKPVFGDRDKTIHDDVMGISQERRTGYAWYTTSPQKALSA 400 (408)
T ss_dssp HHHHHSCCCC---------------CCSSCCEESEECSSSCCBCEECTTSEEESCGGGSCHHHHSSSCCEESTTHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCEECCHHHCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 99986646785355348884242089998533256775899624657998653477662097628702427776999998
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
.
T Consensus 401 y~~w~~~~ 408 (408)
T d1r76a_ 401 FTKWEKRS 408 (408)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 89987449
|
| >d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30802.01 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~l~~~ 80 (408)
T d1c4oa1 1 TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPEN 80 (408)
T ss_dssp CCCCCSCCCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 96214899998779999999999866997379856888789999999999859999999189999999999999864766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVv~~~a~l~~l~~~~~~~~~~~~l~~G 160 (408)
T d1c4oa1 81 AVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVERG 160 (408)
T ss_dssp EEEECCCGGGTSCCCEEEGGGTEEECCCCSCCHHHHHHHHHHHHHHHHCSCEEEEEEGGGCSCCCCHHHHHHCCBC----
T ss_pred CEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHCEEEEECC
T ss_conf 45567753422575456845554444421034677764446555320467659995112321678818876114885179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~l~~~L~~~gY~r~~~V~~~GefsvRG~IlDIfp~~~~~P~RIeffgDeIdsIr~Fd~~tQrs~~~~~~~~i~P 240 (408)
T d1c4oa1 161 KPYPREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELFGDEVERISQVHPVTGERLRELPGFVLFP 240 (408)
T ss_dssp --------------------------------------------------------------------------CCCBCC
T ss_pred CEEEHHHHHHHHHHHHCEECCEEECCCEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC
T ss_conf 89508999999997522214305336605730671276002457637899946733268997278896567655456522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~Gie~yl~~f~~~~~~e~~~tL~ 320 (408)
T d1c4oa1 241 ATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLL 320 (408)
T ss_dssp SCSCCCCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTSCCCCGG
T ss_pred CCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
T ss_conf 41110135578888876566899999998737416777799999988877875188765777799865778899852466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 DYlp~~~lv~~De~~~~~~~~~~~~~e~~e~~~~lle~g~~lP~~~d~~~L~~ee~~~~~~q~i~~S~~p~~~e~~~~~~ 400 (408)
T d1c4oa1 321 DYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGR 400 (408)
T ss_dssp GGSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHTTSSCGGGGGSSCCCHHHHHHTCSEEEEEESSCCHHHHHHCSE
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCCC
T ss_conf 51687508999582877999999998899999868757867885434798899999985598899808998422306885
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
.
T Consensus 401 ive~~~Rp 408 (408)
T d1c4oa1 401 VVEQIIRP 408 (408)
T ss_dssp EEEECSCT
T ss_pred EEEEEECC
T ss_conf 47996088
|
| >d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30801.19 Aligned_cols=1 Identities=0% Similarity=-1.524 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 em~~ifs~~~~~~~~l~ve~A~a~a~~e~G~ip~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~a~~~~L~e~~g~~~~~v 80 (408)
T d1f1oa_ 1 EMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMRENASFDINRILEIEKDTRHDVVAFTRAVSESLGEERKWV 80 (408)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 94787790799999999999999999877999999999999847677999998874538858999999998738646341
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 H~G~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 160 (408)
T d1f1oa_ 81 HYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERF 160 (408)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 67887899998999999998488888899999999999999828860146675177777408899999999999879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~lGGA~Gt~~~~~~~~~~~~~~~lg~~~~~~~~~~~~rd~~~e~~~~l~~la~~l~kia~Dl~~~~s~~~ 240 (408)
T d1f1oa_ 161 KQAKAGIEVGKISGAVGTYANIDPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSET 240 (408)
T ss_pred HHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987650124460431346788558999999846767872278887788999987999999999987789998871344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~e~~~~~~~GSSiMP~K~NP~~~E~v~~~~~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~ 320 (408)
T d1f1oa_ 241 REVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPLWHERDISHSSAERIILPDATIALNYMLNRFS 320 (408)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 61440366789875200035564079999987601111378998726431200304567776214009999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~l~~l~vn~e~m~~nl~~~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~l~~~~~i~~~Ls~eel 400 (408)
T d1f1oa_ 321 NIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKI 400 (408)
T ss_pred HHHHCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHH
T ss_conf 87637865799999999730472689999999998299989999999999999999798899998706786668999999
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
.
T Consensus 401 ~~~lDp~~ 408 (408)
T d1f1oa_ 401 ADCFDYNY 408 (408)
T ss_pred HHHCCCCC
T ss_conf 98659998
|
| >d2hhva2 e.8.1.1 (A:469-876) DNA polymerase I (Klenow fragment) {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
Probab=100.00 E-value=0 Score=30799.89 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~e~ll~~lE~~l~~vLa~ME~~Gi~vD~e~l~~~~~~l~~~~~~le~~i~~~~G~~fN~~S~~ql~~~Lf~~L~l~~~~ 80 (408)
T d2hhva2 1 EQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLK 80 (408)
T ss_dssp TCHHHHHTTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 97689999988899999999984969789999999999999999999999999699679999999999999855999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~r~~~k~~~~~~~~~~~~~~~~~gRih~~~~~~gt~TGR~s~~~Pnlqn~p~ 160 (408)
T d2hhva2 81 KTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPI 160 (408)
T ss_dssp BCSSSBCCCHHHHHHHGGGCHHHHHHHHHHHHHHHHHTTTHHHHHHSCTTTCEECCEEESSCCSSSCCEEESSCTTCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEECCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 58788655335677750112579999999999888886533324305089985787200357654445557632146777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~r~~~~~~~g~~lv~~DysqiElRvlA~ls~D~~l~~~~~~g~D~h~~~a~~~~~~~~~~~~~~~R~~aK~~ 240 (408)
T d2hhva2 161 RLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAV 240 (408)
T ss_dssp SSHHHHGGGGGEECSSTTEEEEEEEESSHHHHHHHHHHTCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 64335023312113047845887220215199999994888899987744215665455404777888070677889987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~~~~~~grrr~~p~~~~~~~~~r~~~~ 320 (408)
T d2hhva2 241 NFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAE 320 (408)
T ss_dssp HHHHHHCCCHHHHHHHHTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSSHHHHHHHH
T ss_pred HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH
T ss_conf 61533245115546101222788999999998640116255789999999828875467984158865566676767888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 r~a~N~~iQgsaAdi~k~a~~~~~~~l~~~~~~~~lv~~VHDEiv~ev~~~~~~~~~~~~~~~M~~~~~l~vPl~~d~~i 400 (408)
T d2hhva2 321 RMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHY 400 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEECSSEEEEEEEGGGHHHHHHHHHHHHHTSSCCSSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 87760011489999999999999999984489978999763105899778999999999999995476788807865044
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
.
T Consensus 401 G~~W~e~k 408 (408)
T d2hhva2 401 GSTWYDAK 408 (408)
T ss_dssp ESSTTTCC
T ss_pred CCCHHHCC
T ss_conf 78967759
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30798.90 Aligned_cols=1 Identities=0% Similarity=1.002 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~ 80 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 80 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 98699999884899999999787899988999988999999868899999999885998877999899999999869977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~ 160 (408)
T d1n11a_ 81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 160 (408)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999874100123211122024555430332222222211001001456464289999875989999999976998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 240 (408)
T d1n11a_ 161 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240 (408)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 78767409999998599999999986588400457789971024320210455555432001221247789999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g 320 (408)
T d1n11a_ 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320 (408)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred HCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC
T ss_conf 08676754420022111112478997334543028489999999779965621023445302210058621355301333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~~~~ 400 (408)
T d1n11a_ 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400 (408)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----CCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 32234689999999999986889999999987889988799998999999983999999999998736564560003668
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
.
T Consensus 401 ~~~~~~~~ 408 (408)
T d1n11a_ 401 SFPETVDE 408 (408)
T ss_dssp CCCCCCCC
T ss_pred CCCHHCCC
T ss_conf 76410149
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30797.39 Aligned_cols=1 Identities=0% Similarity=0.071 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~rGvNlGgWlv~E~wi~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~ 80 (408)
T d1h4pa_ 1 YYDYDHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFA 80 (408)
T ss_dssp CCCTTSCTTSSCEEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 96666787798325886515540466667315554256666555542209999998687889999999885328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T d1h4pa_ 81 NIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSN 160 (408)
T ss_dssp HHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHH
T ss_pred HHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99977998799854499934778887758158999999999999889989998378998776778877656645578168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~ 240 (408)
T d1h4pa_ 161 LAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDF 240 (408)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 99999999999999631345664234412567665666557789999999999998634668569980687770145554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~~~~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~ 320 (408)
T d1h4pa_ 241 MTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWV 320 (408)
T ss_dssp SCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHHHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCC
T ss_pred CCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCC
T ss_conf 26677786367610223541377556775543311433344543156885243112331104441256554430104413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~~~~~~~~~ 400 (408)
T d1h4pa_ 321 NGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKYP 400 (408)
T ss_dssp BTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTTEEEESCSCCSSCSTTCHHHHHHTTSSCSSTTCCSST
T ss_pred CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 67767655565446677001778899999999999999984589777852137999878889999787808896124687
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
+
T Consensus 401 ~~cg~~~~ 408 (408)
T d1h4pa_ 401 NQCGTISN 408 (408)
T ss_dssp TGGGSCCC
T ss_pred CCCCCCCC
T ss_conf 75567889
|
| >d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Probable cysteine desulfurase SufS species: Synechocystis sp. PCC 6803 [TaxId: 1148]
Probab=100.00 E-value=0 Score=30796.97 Aligned_cols=1 Identities=100% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~a~iR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llg 80 (408)
T d1t3ia_ 1 PSLAATVRQDFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN 80 (408)
T ss_dssp CCHHHHHGGGCGGGSCEETTEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96278998758256666589986983185115799999999999998668987731519999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~ 160 (408)
T d1t3ia_ 81 ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 160 (408)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
T ss_conf 89821377505307898888764100226899889850354411211344433026825765420123320077764224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~t~lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~ 240 (408)
T d1t3ia_ 161 SEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEE 240 (408)
T ss_dssp CTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 89966999965554443358089876565214730453130104643224334678648861432357887411121033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~ 320 (408)
T d1t3ia_ 241 ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQ 320 (408)
T ss_dssp HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45308965069854344455555557733543478578999999999999999708799999999877677665225764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L 400 (408)
T d1t3ia_ 321 LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSL 400 (408)
T ss_dssp EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 23468884446754189999589899999999966996996574225587886069960999799999999999999999
Q ss_pred -------C
Q ss_conf -------6
Q 001706 633 -------S 633 (1024)
Q Consensus 633 -------~ 633 (1024)
+
T Consensus 401 ~~~~~~f~ 408 (408)
T d1t3ia_ 401 QATIRFFS 408 (408)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
T ss_conf 99999759
|
| >d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: 2-oxoisovalerate dehydrogenase (E1B), PP module species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30725.26 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~p~~~~~p~p~~rp~~~~d~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~vrvld~~g~~~~~~~~~l~~e~l~~~y 80 (407)
T d1qs0a_ 1 NEYAPLRLHVPEPTGRPGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSYSLVRVLDEQGDAQGPWAEDIDPQILRQGM 80 (407)
T ss_dssp CCSCCCCCCCCCCSCCTTSCCCGGGSCCCCTTCSCCCCTTCCGGGGHHHHTSCBCCBCTTSCBCSGGGSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99898545799999999988885445568876679995568911244245670899899998998778998999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 r~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~~~aL~~~D~~f~~yR~~g~~larG~~~~~~~~e~~g~~~g~~ 160 (407)
T d1qs0a_ 81 RAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPL 160 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999669730668998849999999986797798982545799999987619999999862457877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Gr~~~~h~~~~~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvifv~eN 240 (407)
T d1qs0a_ 161 KGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVN 240 (407)
T ss_dssp TTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 78875443355323200025653346623356677776516760101245655433201888999873057626999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 N~~aist~~~~~~~~~~~~~~ra~~~Gi~~~~VDGnD~~avy~a~~~A~e~aR~g~gP~lIE~~TyR~~gHs~sDD~~~Y 320 (407)
T d1qs0a_ 241 NQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKY 320 (407)
T ss_dssp CSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGT
T ss_pred ECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 02301364111200100688888861865278625439999999998889985389746997741018988765554345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 R~~~E~~~w~~~DPI~rl~~~Li~~g~~se~e~~~i~~ei~~eV~~A~~~Ae~~~~~~~~p~P~~~~lf~~VY~e~p~~l 400 (407)
T d1qs0a_ 321 RPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHL 400 (407)
T ss_dssp SCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHH
T ss_pred CCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHH
T ss_conf 89999998883897999999999879999999999999999999999999987221036899699999845225999889
Q ss_pred ------C
Q ss_conf ------6
Q 001706 633 ------S 633 (1024)
Q Consensus 633 ------~ 633 (1024)
=
T Consensus 401 ~eQ~~el 407 (407)
T d1qs0a_ 401 RRQRQEL 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHHC
T ss_conf 9999739
|
| >d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=100.00 E-value=0 Score=30720.78 Aligned_cols=1 Identities=100% Similarity=1.400 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g 80 (407)
T d1eu8a_ 1 IEEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASG 80 (407)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHT
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCC
T ss_conf 97426999978976699999999999998886918999973684599999999999828999879998948899999879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~~~~~l~~~~~ 160 (407)
T d1eu8a_ 81 WLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGER 160 (407)
T ss_dssp CBCCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 93338576553113255404889987513454230276301234554161255542157988899999999999873045
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (407)
T d1eu8a_ 161 ETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEP 240 (407)
T ss_dssp TTCTTCEEEECCCSSSHHHHHHHHHHHHTTTCCSEEEETTEEEECTTCHHHHHHHHHHHHHHHTSCCSCGGGGTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 76775221234555544302446789984488611024677521469999999999999999705657632000001577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~f~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fl~~l~s~e~ 320 (407)
T d1eu8a_ 241 VRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSV 320 (407)
T ss_dssp HHHHHHTTCEEEEEECTHHHHHHTSTTCTTTTCEEEECCCBCTTSCCCCBEEEEEEEEBTTCSCHHHHHHHHHHHTSHHH
T ss_pred HHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99998568745742572888765320145455534411125678654311304202676787549999999874002789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~eal~~~~~~ 400 (407)
T d1eu8a_ 321 QKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKE 400 (407)
T ss_dssp HHHHHHHTCCCBSBTTGGGSHHHHHHCTHHHHTHHHHHTCBCCCCCTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999851888662777739875611967999999997285278888789999999999999985999999999999999
Q ss_pred ------C
Q ss_conf ------6
Q 001706 633 ------S 633 (1024)
Q Consensus 633 ------~ 633 (1024)
.
T Consensus 401 ~~~~l~~ 407 (407)
T d1eu8a_ 401 AEELVKQ 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHCC
T ss_conf 9999576
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=100.00 E-value=0 Score=30716.21 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~v~Y~i~~drF~~gd~~~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~ 80 (407)
T d1qhoa4 1 SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDT 80 (407)
T ss_dssp CTTSCCTTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSS
T ss_pred CCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 97132057779996355506799877766555455577655667657848999998799999769988996965207765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
T d1qhoa4 81 LAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYF 160 (407)
T ss_dssp CSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSS
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67889988774012224777778998899999999866302113331201455677622222223676556676555555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~f~~~ 240 (407)
T d1qhoa4 161 DDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKS 240 (407)
T ss_dssp SCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 65555422246777786645342234456776655700332025678999876777865315643101101251467899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~i~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (407)
T d1qhoa4 241 LADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKEN 320 (407)
T ss_dssp HHHHHHHHCCCEEEECCCCCCTTSTTHHHHHHHHHHSSCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999742685345565588735667777631135665412102577888887640220146788999875201345202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~f~~nHD~~R~~~~~~~~~~~~~a~a~ll~~pGiP~iyyGdE~G~~g~~d~~~r~~~~~~~~~~~~~~~~~~L~~lR~ 400 (407)
T d1qhoa4 321 LITFIDNHDMSRFLSVNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRR 400 (407)
T ss_dssp CEECSCCTTSCCHHHHCCCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHHHHHHHHHHHH
T ss_pred HCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 12000368854401124899999999999997279868863874397899895410137866688599999999999985
Q ss_pred ------C
Q ss_conf ------6
Q 001706 633 ------S 633 (1024)
Q Consensus 633 ------~ 633 (1024)
-
T Consensus 401 ~~paLr~ 407 (407)
T d1qhoa4 401 NNAAIQY 407 (407)
T ss_dssp HCHHHHH
T ss_pred HCHHHCC
T ss_conf 0984474
|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Burkholderia pseudomallei [TaxId: 28450]
Probab=100.00 E-value=0 Score=30648.11 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~wp~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~lD~~alk~di~~l~~~s~d~wpaD~G~ygp~lVRlAWHsA 80 (406)
T d1mwva1 1 NGTSNRDWWPNQLDLSILHRHSSLSDPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSA 80 (406)
T ss_dssp CCCCHHHHCTTSCCGGGGSCSCGGGCCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99886666831138741356876569898887789998750599999999999745321475534662168998888763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gTYR~~D~RGGanGg~iRfaPe~sW~~N~~Ldkar~lLepIK~ky~~~IS~ADLivLAG~vAiE~~Gg~~i~f~~GR~d~ 160 (406)
T d1mwva1 81 GTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRADT 160 (406)
T ss_dssp TTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred CCCCCCCCCCCCCCCEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCC
T ss_conf 24104579889987615775443578754679999999999997477754233256620788987369813777676664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Plaa~~~gliyvnpeg~~g~pd~~~~a~~lrd~f~rMglnd~E~vAL 240 (406)
T d1mwva1 161 WEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVAL 240 (406)
T ss_dssp SSCCCCCCCSCSSTTCCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 33223556644443454456544566753334764444456666687645688970235899999987606870889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~G~HtlG~~hg~~~~~~~g~~pe~~~~~~~g~gw~~~~~~g~~~~~~~sg~eG~wT~~P~~~dN~yF~~Ll~~~we~~~ 320 (406)
T d1mwva1 241 IAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTK 320 (406)
T ss_dssp HHHHTTSCBCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEE
T ss_pred HHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEC
T ss_conf 86432211135788510047754567510025666666554577766778873676799761116888656447645520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 s~~g~~q~~~~~~~~~~pda~~~s~~~~~~ml~tDlal~~Dp~~R~iaE~YA~d~e~F~~dFa~AW~KLm~~Dmgp~~~y 400 (406)
T d1mwva1 321 SPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTHRDMGPRARY 400 (406)
T ss_dssp CTTCCEEEEETTCCSCEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
T ss_conf 45655245645755577766588777476402443333029888999999962999999999999999974688980202
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
.
T Consensus 401 ~g~~~p 406 (406)
T d1mwva1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 699999
|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=100.00 E-value=0 Score=30648.10 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~~d~~~~~~di~~l~~~~~~~wpaD~g~~gP~lVRlAWHs 80 (406)
T d1itka1 1 KRPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHS 80 (406)
T ss_dssp CCCCCHHHHCTTSCCTHHHHTTSCCCSSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99986566586444773245687667989988678999876449999999999974433357544466313676555553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 AgTYR~sD~RGGanGariRfaPe~sW~~N~~LdkAr~lLepIK~kyg~~IS~ADLivLAG~vAiE~~ggp~i~f~~GR~D 160 (406)
T d1itka1 81 AGTYRTADGRGGAAGGRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 160 (406)
T ss_dssp HTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCC
T ss_pred HCCEECCCCCCCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 10011257888998762575666266777422999999999998627355443042000155564426863224557765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~~~d~~~g~~~e~~~d~~~~~~~~l~~pl~a~~~~liyv~Peg~~g~~d~~~~a~~lrd~f~rMgl~d~E~VALigG 240 (406)
T d1itka1 161 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAG 240 (406)
T ss_dssp CSSCCTTCCCCSCSSTTCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 55655554557655656666677655555430013235555688665677884115899999999824881999998750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~htlG~~hg~~~~~~~~g~~Pe~~~~~~~g~g~~~~~~~g~g~~~~~sG~~G~wT~~p~~~~N~yF~~Ll~~~w~~~~s~ 320 (406)
T d1itka1 241 GHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGP 320 (406)
T ss_dssp HTTSCEECBSSCHHHHBCCCGGGSCGGGTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECC
T ss_conf 24246335788743357878655544346764457888775765545775544455434345612100135565410036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~g~~~~~~~~~~~~~~~pda~~~~~~~~~~ml~tDlaL~~Dp~~R~iaE~YA~d~e~F~~DFa~Aw~KL~~~D~gp~~ry 400 (406)
T d1itka1 321 GGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHRDMGPPERF 400 (406)
T ss_dssp TSCEEEEESSSTTTTCEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77437526776544577756566775577503667876009878999999960999999999999999972678983345
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
.
T Consensus 401 ~gp~~p 406 (406)
T d1itka1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Synechococcus sp. pcc 7942 [TaxId: 1140]
Probab=100.00 E-value=0 Score=30647.29 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~wp~~~~~~~l~q~~~~~~p~~~~~~y~~~~~~ld~a~k~Dl~~l~~~s~~~wpaD~G~ygP~lVRlAWhsAgTYR 80 (406)
T d1ub2a1 1 STAEWWPKALNLDILSQHDRKTNPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYR 80 (406)
T ss_dssp CTTSSCTTSCCGGGGSCSCTTTCCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 97555887768521015887679899997889999999999999999997455234755457621377865554014321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~sD~RGGanGgriRfaP~~sW~~N~~LdkAr~lL~pIK~ky~~~IS~ADLivLAG~vAiE~agg~ti~f~~GR~Da~~~~ 160 (406)
T d1ub2a1 81 IADGRGGAGTGNQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPE 160 (406)
T ss_dssp TTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCC
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 67898899877446822304566318899999998887642876531137776129999873498335677766666776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~dv~~g~~~e~l~~~~~~~~~~~~~~~l~~pl~a~~~~liyvnP~g~~g~pd~~~~a~~ir~~f~rM~mnd~E~vAL~aG 240 (406)
T d1ub2a1 161 KDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAG 240 (406)
T ss_dssp TTCCCCSCSSSSCCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 55455554455788767544467754322465420157311177534678974555788655677753788998642153
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~ht~Gk~hg~~~~~~~g~~p~g~~~e~~g~~~~n~~~~g~g~~t~tSg~eg~wt~~p~~~dn~yF~~ll~~~~W~~~ks~ 320 (406)
T d1ub2a1 241 GHTVGKCHGNGNAALLGPEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNP 320 (406)
T ss_dssp HHTSCCBCBCSCSTTBCCCGGGSCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCC
T ss_conf 31002136777501237655565410067766777773646666688888777656443467412333205640102453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~ga~q~~~~~~~~~~~~~~~~d~s~~~~~~mt~tDLal~~Dp~~R~iaE~Ya~d~e~F~~dFa~AW~KL~~~Dmgp~~~~ 400 (406)
T d1ub2a1 321 AGAWQWEPINPREEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTHRDMGPKARY 400 (406)
T ss_dssp TSCEEEEESSCCGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHC
T ss_conf 30114455675323477755477777577503567763108878999999971999999999999999971677976531
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
.
T Consensus 401 ~g~~~p 406 (406)
T d1ub2a1 401 IGPDVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30646.52 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (406)
T d1u2za_ 1 SSTFVDWNGPCLRLQYPLFDIEYLRSHEIYSGTPIQSISLRTNSPQPTSLTSDNDTSSVTTAKLQSILFSNYMEEYKVDF 80 (406)
T ss_dssp CCBSSCTTSCEEECCSCCBCHHHHHHCCCCCCCCCCGGGCCC------------------EEEEECSSCTTCEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEC
T ss_conf 97532587743465553020665310553379877772000477771443068876898605887324666103788850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~p~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~l~~~~ 160 (406)
T d1u2za_ 81 KRSTAIYNPMSEIGKLIEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRIIDHLETID 160 (406)
T ss_dssp SSCCSSSCHHHHHHHHHHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56524569899999999999986488489999999999999998742799999999999999999866615988876267
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~i~~~~y~r~v~p~~~~L~~Y~~fs~~vYGEl~~~~i~~Il~~l~Lkpgd~fLDLGCG~G~~vl~aA~~~g~ 240 (406)
T d1u2za_ 161 KIPRSFIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGC 240 (406)
T ss_dssp EEEHHHHHHHHHHHHHHHTGGGGGGGCSCCSSGGGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCC
T ss_conf 88889999998886446036886776266789977403478899999999838999998996789875999999997699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~ 320 (406)
T d1u2za_ 241 ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKIL 320 (406)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 76999848999999999999987555555303566520334404221654224545643999733167367999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 r~LKPGGrIVs~~~~~~~~~~it~r~~~~~~~il~v~~~~~~~~sVSWt~~~v~yyl~tv~~~i~~~~f~~~~~~R~~r~ 400 (406)
T d1u2za_ 321 QTAKVGCKIISLKSLRSLTYQINFYNVENIFNRLKVQRYDLKEDSVSWTHSGGEYYISTVMEDVDESLFSPAARGRRNRG 400 (406)
T ss_dssp TTCCTTCEEEESSCSSCTTCCCCSSSTTCGGGGEEEEEEECCTTCBTTBSSCCEEEEEEECSSCCGGGSCCC------C-
T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHCCCCCHHCCCCHHHCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 72699828999114678740145520353000033132145336633466987653739998888721462113553347
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
.
T Consensus 401 ~P~kyt 406 (406)
T d1u2za_ 401 TPVKYT 406 (406)
T ss_dssp --CCBC
T ss_pred CCCCCC
T ss_conf 888889
|
| >d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Alkaline phosphatase-like superfamily: Alkaline phosphatase-like family: Phosphonoacetate hydrolase domain: Phosphonoacetate hydrolase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30645.75 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~vi~I~iD~l~~~~l~~~~~~~~TPnid~La~~G~~f~~~~~~~~~c~PsrasllTG~yp~~hG 80 (406)
T d1ei6a_ 1 TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHG 80 (406)
T ss_dssp CCEEEETTEEEECCSSCEEEEECTTCCHHHHHHHHHTTSCHHHHHGGGTSEEEEEECCSSCCHHHHHHHHHHTSCHHHHC
T ss_pred CCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC
T ss_conf 96484786104678998899997899978874005557991899999689348322049971589999999678988879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T d1ei6a_ 81 ICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENIL 160 (406)
T ss_dssp CCSSEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCSEEEESTTCSSCCHHHHSCCCHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 57775446554410100332123456544311123465302114565645555430321456567786523444543221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~i~~l~~~~~~~~~~~d 240 (406)
T d1ei6a_ 161 ARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITAD 240 (406)
T ss_dssp HHHTCCCCCSSSTHHHHHHHHHHHHHHHTTCCSEEEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 10233222123332102444432220247884201123433334456899889999999999999999867966999934
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d1ei6a_ 241 HGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLT 320 (406)
T ss_dssp CCCEECBCTTSCBCEEEHHHHHHHHHCTTSEEEECTTSCTTCCBGGGCBSEEEEEECTTSCHHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHCC
T ss_conf 54345675223320232144201110110000245422210000122320234313327899999998752365223304
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~igdii~~sd~g~~lg~~~~~~~~s~~~~~~~~hGg~~e~~VPlIi~~P~~~~~~~~~i~~~Di~d~ 400 (406)
T d1ei6a_ 321 RSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLDSPGRLRNFDIIDL 400 (406)
T ss_dssp HHHHHHHHTCCGGGSCSEEEEECTTCEEESCTTTCBGGGCCSCCEECCSGGGCEEEEEESSCBCCCC--CCCBGGGHHHH
T ss_pred HHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHH
T ss_conf 98999973999787466999956996877455445433467767565651147308799558656777884325061887
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
+
T Consensus 401 ~~~~~~ 406 (406)
T d1ei6a_ 401 ALNHLA 406 (406)
T ss_dssp HHHCBC
T ss_pred HHHHCC
T ss_conf 763039
|
| >d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase T species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30641.64 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~~~d~~i~r~~~~~a~~e~l~~~p~ 80 (406)
T d2ayia1 1 AFKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVIYGDQELARKRLALAPEEGLDKAPA 80 (406)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEECCHHHHHHHHHHSCTTCTTCCCH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCH
T ss_conf 96799999999999971268999989997166569999999999998699738996067699999996399988743624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~a~i~I~~~np~~l~~vdp~ki~~~~ka~~~~~~~~~~~~~~~~~~W~i~~~P~~~~A~~~~~~l~~ 160 (406)
T d2ayia1 81 WLYEGMARAFREGAARLAVSGSDPKALEGLPPEKVGRAQKANARAYKPALEAITEFVTNWTIVPFAHPGWARAVFPGLPE 160 (406)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCBCBEECCCTTTHHHHCCCSCH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCH
T ss_conf 46889999997189289961698520126996899999998899879999998536566399975782177661789767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~e~~~~l~d~if~~~~ld~~dp~~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~GTDL~~~i~~~~~w~~~~~~~~~g~~~ 240 (406)
T d2ayia1 161 EEAVRRLWEAIFQATRADQEDPIAAWEAHNRALHEKVAYLNARRFHALHFKGPGTDLVVGLAEGHLWQGGATATKGGRLC 240 (406)
T ss_dssp HHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTEEEEEECCTTBCCEESSCCCSSSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999976346651079999999999999999985165148996389369999945884015887642278767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~NlP~GEvftaP~e~svnG~i~~d~~~~~~g~l~~~i~l~f~~G~vv~~~~~~~~~~l~~~~~~d~~a~~lgE~~ig~n 320 (406)
T d2ayia1 241 NPNLPTEEVFTAPHRERVEGVVRASRPLALGGTLVEGIFARFERGFAVEVRAEKGEEVLRRLLDTDEGARRLGEVALVPA 320 (406)
T ss_dssp CSBSSCCCEEECCCTTCEEEEEECSSCEEETTEEEBSCEEEEETTEEEEEECSBCHHHHHHHTTSSSGGGSEEEEECCCT
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 68899832585020484211998045454433303473799948879997557649999987624867636788876047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~n~L~DE~gt~Hia~G~~Y~~~~~g~~~~~~~~~~g~n~s~~H~D~~~~~~~~~~dgv~~dG~~~~i~~ 400 (406)
T d2ayia1 321 DNPIAKTGLVFFDTLFDENAASHIAFGQAYQENLEGRPSGEAFRKRGGNESLVHVDWMIGSEEMDVDGLYEDGTRTPLMR 400 (406)
T ss_dssp TSHHHHHTCCCCCHHHHHTTSCEEEEECCCGGGBCC---CCSHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEE
T ss_conf 88540345111330587478604766876411134788756763079806644786713887178999984891889988
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
=
T Consensus 401 ~G~f~i 406 (406)
T d2ayia1 401 RGRWVV 406 (406)
T ss_dssp TTEECC
T ss_pred CCEEEC
T ss_conf 989969
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=100.00 E-value=0 Score=30637.86 Aligned_cols=1 Identities=0% Similarity=-0.893 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~viY~i~~drF~~g~~~~d~~~~~~~~~~~~~~~~~gGdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~ 80 (406)
T d3bmva4 1 ASDTAVSNVVNYSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPV 80 (406)
T ss_dssp CCTTSTTCTTCCTTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCE
T ss_pred CCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCC
T ss_conf 98766678888753708996123306899777878876577777657667858999987448888987597789979753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~ 160 (406)
T d3bmva4 81 ENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYD 160 (406)
T ss_dssp EECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEE
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 56544567777789712127665235456844461899999999997436431365201566566522012034675356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~~~~~giDGfR~D~~~~~~~~~~ 240 (406)
T d3bmva4 161 NGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQ 240 (406)
T ss_dssp TTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEESCGGGSCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 87411466545566434556764445666311245554210226689999999887777530777532245444632568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d3bmva4 241 KNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDYNFIND 320 (406)
T ss_dssp HHHHHHHHHHSCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99988888753212334333455100022110247776500122023788876405740267789987620013443344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~fl~nHD~~R~~~~~~~~~~~~a~~~~lt~pG~P~IyyGdE~g~~g~~dp~~r~~~~~~~~~~~~~~~~~~Li~lRk~ 400 (406)
T d3bmva4 321 MVTFIDNHDMDRFYNGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKS 400 (406)
T ss_dssp CEECSCCSSSCCSCCSSCSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHHHHTTHHHH
T ss_pred HCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 32566677646660688799999999999971797777657653868998824440489877896999999999999863
Q ss_pred -----C
Q ss_conf -----6
Q 001706 633 -----S 633 (1024)
Q Consensus 633 -----~ 633 (1024)
-
T Consensus 401 ~paLry 406 (406)
T d3bmva4 401 NPAIAY 406 (406)
T ss_dssp CHHHHH
T ss_pred CHHHCC
T ss_conf 944159
|
| >d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=30576.05 Aligned_cols=1 Identities=0% Similarity=1.001 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~ 80 (405)
T d1kl1a_ 1 MKYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQ 80 (405)
T ss_dssp CCHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 93155549999999999999997691586067767899999856752475768899964607762299999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lF~a~~anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~ 160 (405)
T d1kl1a_ 81 LFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKAR 160 (405)
T ss_dssp HHCCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHH
T ss_pred HHCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCHHHHHHHHH
T ss_conf 83999414414676588999999844899878873035566445676223364588877732313025313999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrgg~I~~~~ 240 (405)
T d1kl1a_ 161 LHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE 240 (405)
T ss_dssp HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCCCEEEECC
T ss_conf 62765377523146665586999998764198786035667665443126984652110323355334677773587500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (405)
T d1kl1a_ 241 QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQ 320 (405)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCC
T ss_conf 35777776508653468415678899999998738388999999999888999998648943435887664563243446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~~~~~~~~~~ir~~V 400 (405)
T d1kl1a_ 321 QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEARQRV 400 (405)
T ss_dssp TCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 77499999999980959767869899999998872265688998589988999999999999996589679999999999
Q ss_pred ----C
Q ss_conf ----6
Q 001706 633 ----S 633 (1024)
Q Consensus 633 ----~ 633 (1024)
.
T Consensus 401 ~~L~~ 405 (405)
T d1kl1a_ 401 AALTD 405 (405)
T ss_dssp HHHHC
T ss_pred HHHHC
T ss_conf 99639
|
| >d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Proton glutamate symport protein superfamily: Proton glutamate symport protein family: Proton glutamate symport protein domain: Proton glutamate symport protein species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=30572.95 Aligned_cols=1 Identities=0% Similarity=1.102 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 l~~rili~lv~Gi~~G~~~~~~~~~~~~~~~l~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~ 80 (405)
T d2nwwa1 1 VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL 80 (405)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTTHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
T ss_conf 98899999999999999972222127899999989999999999999999999999999745501002089999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 tt~iA~~igl~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~Ni~~al~~~~~l~vi~fail~Gial~~~~~~ 160 (405)
T d2nwwa1 81 TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNS 160 (405)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCCCCCCCCCCCCCCCCCHHHHHGGGSCSCHHHHHHSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999860133322000000014311001899999705587899964678630356788889999985022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~l~~~~~~l~~v~~kii~~im~laPigvf~l~a~~~~~~g~~~l~~l~~~~~~~~~~~~l~~~~~~~i~~ 240 (405)
T d2nwwa1 161 ENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLL 240 (405)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00345667889999999999999999898887778889999998753334555567899999999999999888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~~~~~~~~gv~~~i~~fvlPlgatin~~G~a~~~~~~~~f~a~~~g~ 320 (405)
T d2nwwa1 241 KIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGS 320 (405)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHCCTGGGHHHHHHHHHTTTCCTTTHHHHTTTTSSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 98289848884322310421200166556617899999975999352010236302100364124899999999987197
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~l~~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~glP~~~~~~~~~i~li~~id~l~D~~rT~~Nv~gd~~~a~i 400 (405)
T d2nwwa1 321 HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAI 400 (405)
T ss_dssp CCCSSTTHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
T ss_conf 99989999999999999986178616799999999998699886410565888887498550550898828776588841
Q ss_pred ----C
Q ss_conf ----6
Q 001706 633 ----S 633 (1024)
Q Consensus 633 ----~ 633 (1024)
.
T Consensus 401 v~k~e 405 (405)
T d2nwwa1 401 VAKTE 405 (405)
T ss_dssp HHHHC
T ss_pred EECCC
T ss_conf 33579
|
| >d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=30570.58 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~~ 80 (405)
T d1h6za3 1 VAKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKEM 80 (405)
T ss_dssp CCCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99747997399865578455750568899899999786999998886299999999738976889999999997664776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 160 (405)
T d1h6za3 81 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 160 (405)
T ss_dssp CCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTSTT
T ss_pred HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 66523543115553023210122100455666665456689998742550566899999999763011246305678898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~~ 240 (405)
T d1h6za3 161 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 240 (405)
T ss_dssp THHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
T ss_conf 88888751651124572888887888999866541387541054677678888987620572377778761754113331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (405)
T d1h6za3 241 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 320 (405)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCSCCEESSHHHHHHHHTTSSCCHHHHHHHSCC
T ss_pred HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCHHHCCCCCEECCCCCCCC
T ss_conf 11234542135665443334556777898753368646676233213765770466403310100145321104665545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~l~~e~~~~La~l~~~iE~~fg~PqDIEWAi~dg~L~ILQaRPv~~t~~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 400 (405)
T d1h6za3 321 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 400 (405)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHHTSSCHHHHHHTSCGGGG
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
T ss_conf 55528799999999999999982998204999989989999766788668889999999997699798999872798278
Q ss_pred ----C
Q ss_conf ----6
Q 001706 633 ----S 633 (1024)
Q Consensus 633 ----~ 633 (1024)
.
T Consensus 401 ~~~~~ 405 (405)
T d1h6za3 401 DHLMH 405 (405)
T ss_dssp GGGGC
T ss_pred HHHCC
T ss_conf 67448
|
| >d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30564.87 Aligned_cols=1 Identities=100% Similarity=1.467 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~d~~~vR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~ 80 (405)
T d1jf9a_ 1 IFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN 80 (405)
T ss_dssp CCCHHHHHHTCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHCHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98979998758211467189982997382006899999999999998666987630409999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i 160 (405)
T d1jf9a_ 81 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 160 (405)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHC
T ss_conf 98755430237688897788842331026789989998375331699999999973968999877998838799999753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~t~lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~ 240 (405)
T d1jf9a_ 161 DEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEA 240 (405)
T ss_dssp CTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEECHH
T ss_conf 69957999966777655438467766678873975641554000015653333078646613230156887510242265
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~ 320 (405)
T d1jf9a_ 241 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP 320 (405)
T ss_dssp HHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54036863223565675344555655553224307787677899999999999981849999999999988776651388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i 400 (405)
T d1jf9a_ 321 DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 400 (405)
T ss_dssp TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 65556876767479997389899999999987892997660321567886099988999788999999999999999999
Q ss_pred ----C
Q ss_conf ----6
Q 001706 633 ----S 633 (1024)
Q Consensus 633 ----~ 633 (1024)
.
T Consensus 401 ~r~~~ 405 (405)
T d1jf9a_ 401 HRLLG 405 (405)
T ss_dssp HHHHC
T ss_pred HHHCC
T ss_conf 99609
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30562.27 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~g~~~~~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~ 80 (405)
T d1lnsa3 1 LDNHYHFFNDKSLATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHD 80 (405)
T ss_dssp CCSSCCEETTEECSCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCC
T ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98855433783413205887568688982888878899874799999742889974599996786787766544322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~ 160 (405)
T d1lnsa3 81 MNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQ 160 (405)
T ss_dssp CCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 65433445543333233454222234555665555654455664445568898679879997888788999755468866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G 240 (405)
T d1lnsa3 161 QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENG 240 (405)
T ss_dssp HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCC
T ss_conf 63009999999871563333433443211454387458995289999999998608865419994476655888754178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~G 320 (405)
T d1lnsa3 241 LVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHG 320 (405)
T ss_dssp SBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEE
T ss_conf 40035421255666653146655555400221115565154203455541233233555536853565137988899975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 w~D~~v~~~~~~~~y~al~~~~~~~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~LkG~~ng~~~~~~~~~~~~g~~~W~ 400 (405)
T d1lnsa3 321 LQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLDRDLNLNLPPVILQENSKDQVWT 400 (405)
T ss_dssp TTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCCCCCCCCSEEEECTTSSSCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 06889897899999999873799379995887899765555369999999999986889889898987999737999741
Q ss_pred ----C
Q ss_conf ----6
Q 001706 633 ----S 633 (1024)
Q Consensus 633 ----~ 633 (1024)
=
T Consensus 401 ~~~~W 405 (405)
T d1lnsa3 401 MMNDF 405 (405)
T ss_dssp EESCS
T ss_pred CCCCC
T ss_conf 08989
|
| >d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Plasmodium yoelii yoelii [TaxId: 73239]
Probab=100.00 E-value=0 Score=30491.50 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~y~p~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~ 80 (404)
T d1z7da1 1 KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFS 80 (404)
T ss_dssp CCHHHHHHHHHHHBCCCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 98799997787617888999885699946388997998999983306887846259699999999999857886665102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~ 160 (404)
T d1z7da1 81 VPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 160 (404)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999997444314433024410243037789999998875213443222442222245788744333456554455677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~ 240 (404)
T d1z7da1 161 GPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC 240 (404)
T ss_dssp -----CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 88876300236656899999706997799999778388897409999999999999881978999767547774434345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~ 320 (404)
T d1z7da1 241 VHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 320 (404)
T ss_dssp GGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
T ss_conf 00059887778872311289887554456399871478998576889895013555544344300003443001015789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~al 400 (404)
T d1z7da1 321 ENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTV 400 (404)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999975699727887527199999748865599999999969938943899989997986789999999999999999
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
.
T Consensus 401 k~~~ 404 (404)
T d1z7da1 401 KFFD 404 (404)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9629
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30491.55 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~P~Pi~~~~Dp~dR~v~~~P~~~~pyD~R~~i~g~~~~~~~~~~i~D~~sF~E~~~~~a~svVtG~ARL~G~PVGVIAn 80 (404)
T d1uyra2 1 NMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGV 80 (404)
T ss_dssp TSCCCCCCCSSCSSSCCCCCCCSSSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTTSCTTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 98989789999800135657899999777999846755555445010287025520046786699999999999999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 e~~~~~g~i~aDpa~~~s~~~~~~~~Ggv~~p~sA~K~A~~i~d~cd~~~lPLi~l~D~pGF~~G~~~E~~gilr~GA~i 160 (404)
T d1uyra2 81 ETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFI 160 (404)
T ss_dssp CCSCEEEEECCCTTCSSCCCEEEEECTTCBCHHHHHHHHHHHHHHHTTSCCCEEECCCCCCBCC------CTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 76102687568755653055565404786685579999999998652346645886137766676899987899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~A~~~~~vP~i~vI~~~g~~~GGa~vv~~~~~~~~~~~~yAwP~a~~gVm~pEGav~I~fr~e~~~~~~~r~d~~~~el 240 (404)
T d1uyra2 161 VDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYREL 240 (404)
T ss_dssp HHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGGTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHC-------
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEECCHHHHCCHHHHHHHHHHH
T ss_conf 99998548997999957864130234103676677655488878654106786654321033021113265568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~~a~e~~~~l~~~i~~re~~l~p~y~qvA~~Fadlhdt~~Rm~~kG~I~~iv~w~~tR~~~~~~lrr~l~e~~ 320 (404)
T d1uyra2 241 RSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEY 320 (404)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTTSSHHHHHHHTCSSEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98725755587789999999999999862789999999998508687898568466122878859999999999874999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (404)
T d1uyra2 321 LIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQDLAKKIRSDHDNAIDGLS 400 (404)
T ss_dssp HHHTTTTCCSSCCHHHHHHHHHTTSCTTSCTTCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999985777787999999999987346865639999999847799999999998999999999997539088999999
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
.
T Consensus 401 ~~~~ 404 (404)
T d1uyra2 401 EVIK 404 (404)
T ss_dssp TCCC
T ss_pred HHHC
T ss_conf 9849
|
| >d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Kynureninase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30490.14 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~d~~d~l~~~R~~F~~~~~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA 80 (404)
T d1qz9a_ 1 TTRNDCLALDAQDSLAPLRQQFALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLA 80 (404)
T ss_dssp CCHHHHHHHHHTCTTGGGGGGBCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 96699997567781899985189999989867851033789999999999998750467565552328999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~llga~~~ei~~~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
T d1qz9a_ 81 TLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQA 160 (404)
T ss_dssp TTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHH
T ss_pred HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECEECCCCCCCHHHHHH
T ss_conf 99689987579956706777777655555420357885799962543347788775422132100010354542668986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~~~T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~ 240 (404)
T d1qz9a_ 161 IDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWV 240 (404)
T ss_dssp CSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred CCCCCEEEEEECCCCCCCCEECHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEEEE
T ss_conf 69884599984245555616238997310324443326885123321233444454509998050214668856999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 320 (404)
T d1qz9a_ 241 SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELV 320 (404)
T ss_dssp CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36556307863223577555522234544335604554320010467888777888877668999999987678999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~ 400 (404)
T d1qz9a_ 321 EQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 400 (404)
T ss_dssp HHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75435898799788883120139999169999999999888989862599869997997789999999999999999971
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
.
T Consensus 401 ~~~~ 404 (404)
T d1qz9a_ 401 KTWA 404 (404)
T ss_dssp TTTC
T ss_pred CCCC
T ss_conf 7889
|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Alpha-amylase AmyC species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30489.93 Aligned_cols=1 Identities=0% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~k~~l~lvlH~HqP~~~~~~~~~~~ee~W~~~~~~~~Y~pll~~l~~~~~~r~t~n~sP~LleQL~D~~~~~~f~~~~~~ 80 (404)
T d2b5dx2 1 MRGKILIFLHAHLPYVHHPEYDHFLEERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHMEK 80 (404)
T ss_dssp CCEEEEEEEEECCCCCCCTTCSSCTTHHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 93489999945888644899886443669999999988999999985868619998779999987586756446999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~r~L~~~G~vEll~~~y~Hpilpll~~~~e~~~ 160 (404)
T d2b5dx2 81 LIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVN 160 (404)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHH
T ss_conf 99986666552234204788999999999999999999966478999999997698048723520123455049869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Qi~~g~~~~~~~fG~~P~G~W~pE~a~~~~l~~~l~~~Gi~~~~~d~~~l~~~~~~~~~~~~~p~~~~~~~~~~~rd~~ 240 (404)
T d2b5dx2 161 AQITVGVKNYEKHMKKHPRGIWLAECGYYQGLDLYLAQNNVEYFFVDSHAFWFADEQPRYGVYRPIMTPSGVFAFARDPE 240 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEECGGGCBCTTHHHHHHHTTCCEEEECTHHHHTSSSCCTTGGGSCEECTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 99999999999986999988978753558769999997798699968335523577887666576215886157742510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~vws~~~G~pg~~~~~~~~~~~~~~~~~~~i~~~frd~~ls~~igf~y~~~~~~~~~~~~k~~Yd~~~A~~~a~~~a 320 (404)
T d2b5dx2 241 SSEQVWSAAVGYPGDPRYREFYRDIGFDREMEYIKDYIDPSGVRINTGIKYHRITSKSLDASQKEYYDIDLAMEAVEEHA 320 (404)
T ss_dssp GCGGGGCTTTSGGGCTTSBCTTCCHHHHSCHHHHGGGSCTTSCCCCCSCCCBBCCSSCSCGGGCCBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 01235414568878842121024533467776135764477632011402303566446643234479899999999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~f~~~~~~~~~~~~~~~~~~~vv~i~~DgE~fGh~w~eG~~fL~~l~~~l~~~~~i~~~T~se~l~~~~~~~~~~l~~g 400 (404)
T d2b5dx2 321 RDFLHKKESQARRLMDIMGVEPVIVAPFDAELFGHWWFEGVFFLKRFFELVNESKDLKLVTASEVIDTLEEVQIATPADS 400 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHHCSSEEECCHHHHHHHCCCCCBCCCCSB
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999876523689987999755132066713379999999999863898389769999986899772230799
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
|
T Consensus 401 SWg~ 404 (404)
T d2b5dx2 401 SWGA 404 (404)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 9998
|
| >d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-CAM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30489.38 Aligned_cols=1 Identities=0% Similarity=0.603 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 l~p~p~~~p~~~~~d~d~~~p~~~~~dp~~~~~~lr~~~~~~~~~~~~~~g~w~vtr~~dv~~vl~d~~~Fss~~~~~~~ 80 (404)
T d1re9a_ 1 LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPR 80 (404)
T ss_dssp CCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHGGGGSTTSCSEEEECGGGCEEEECSHHHHHHHHHCTTTEETTSCSSSH
T ss_pred CCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98877999832266789898577632818999999960899779856999989976999999997699757689987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~D~p~H~~~R~~l~~~Fs~~~l~~~~~~i~~~~~~ll~~~~~~g~~D~v~~~a~~l~~~vi~~llG~p 160 (404)
T d1re9a_ 81 EAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLP 160 (404)
T ss_dssp HHHHHCCCTTTTCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 44333456654578889999997526757843189998999999999974421467346420344577888799987420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~li~~~r~~~~~d~~~~~~~~~~~~~~~~~~e~~~~~~~l~~ag~ 240 (404)
T d1re9a_ 161 EEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGL 240 (404)
T ss_dssp GGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02102321335655431226899999999999999998887506654402333100233345758899999999998763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 eTt~~~l~~~~~~L~~~p~~~~~l~~~~~~~~~~v~E~lR~~~p~~~~r~~~~~~~~~G~~ip~G~~V~~~~~aanrDp~ 320 (404)
T d1re9a_ 241 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDER 320 (404)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCCBCCEEEESSCEEETTEEECTTCEEECCHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 34678899999997550588999876410111123342234553333433223200388667640233243675367854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~f~dPd~F~p~R~~~~hl~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~g~~~lpv~~~P~~ 400 (404)
T d1re9a_ 321 ENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPAT 400 (404)
T ss_dssp TSSSTTSCCTTCSSCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCCEECSSBCEESCCEEECCGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCEEEEEEEEECC
T ss_conf 47993331889999998877998616801999999999999999997898589999964315887258543468992068
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
-
T Consensus 401 ~~~~ 404 (404)
T d1re9a_ 401 TKAV 404 (404)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 6869
|
| >d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30488.32 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~ 80 (404)
T d2byla1 1 GPPTSDDIFEREYKYGAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAF 80 (404)
T ss_dssp CCCCHHHHHHHHHHHBCSCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98967999999877546788987844898454999979879999926889988553798999999999996478755643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~ 160 (404)
T d2byla1 81 YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYD 160 (404)
T ss_dssp EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 31049999876543011332220147666403589999987640366312311223357884556510340577865455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~p~~~~~~~~p~~d~~~l~~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~ 240 (404)
T d2byla1 161 GFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW 240 (404)
T ss_dssp TSCSCCTTEEEECTTCHHHHHHHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
T ss_conf 77888887157346679999985579986999978843888971499999999999998628079960465364635533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 320 (404)
T d2byla1 241 LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 320 (404)
T ss_dssp SGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CHHHHCCCCCCEEEECCHHHCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 33654699988999774646898662104521023312578887859886999999999999999854703566676688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 l~~~l~~l~~~~i~~vRg~Gl~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~a 400 (404)
T d2byla1 321 LRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKT 400 (404)
T ss_dssp HHHHHHTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 99999960136631356246289999826886129999999996991992489998999799678999999999999999
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
-
T Consensus 401 l~~f 404 (404)
T d2byla1 401 ILSF 404 (404)
T ss_dssp HHTC
T ss_pred HHCC
T ss_conf 9729
|
| >d1h12a_ a.102.1.2 (A:) Endo-1,4-beta-xylanase {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Endo-1,4-beta-xylanase species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=0 Score=30484.86 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~a~~~~~y~n~~~~~~~~~i~~k~~~~~~~~f~~~~~~~~y~~~~~~~~~~~~~~~~i~d~~~~dv~SEGq 80 (404)
T d1h12a_ 1 AFNNNPSSVGAYSSGTYRNLAQEMGKTNIQQKVNSTFDNMFGYNNTQQLYYPYTENGVYKAHYIKAINPDEGDDIRTEGQ 80 (404)
T ss_dssp CCCSSCCSSCHHHHCCCCCHHHHTTCCSHHHHHHHHHHHHSSSCSSSCCEEEEEETTEEEEEEEEECCTTTCCEEEHHHH
T ss_pred CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98888787761333755478898619999999999999971789884489971687665200012255479986654378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gYGMl~Av~~ndr~~FD~Lw~Wt~~~l~~~d~~~~~~~~gL~aW~~~~~~~~~~~v~d~nsAtDGDl~iA~ALl~A~~~W 160 (404)
T d1h12a_ 81 SWGMTAAVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARW 160 (404)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999809999999999999998604555444455677613345888987556889999768999999999999861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~~~Y~~eA~~il~~i~~~~~~~~~~~l~P~~~~f~nPSY~~P~~~~~fa~~~~~~~~~~~W~~v~~~s~~ll~~~~ 240 (404)
T d1h12a_ 161 GNSGEFNYYNDAITMLNTIKNKLMENQIIRFSPYIDNLTDPSYHIPAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF 240 (404)
T ss_dssp CSSSSCCHHHHHHHHHHHHHHHSEETTEECSCTTCSSCBCGGGCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89407799999999999888740578852556875578686325489999999860577540889999999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~s~~p~~gL~~d~~~~dg~~~~~~~~~~~~~~~~~~~yDA~Rvpl~~a~dy~w~~~d~~~~~~~~~~~~f~~~~~~~~ 320 (404)
T d1h12a_ 241 TKVSGSPHWNLPTFLSRLDGSPVIGYIFNGQANPGQWYEFDAWRVIMNVGLDAHLMGAQAWHKSAVNKALGFLSYAKTNN 320 (404)
T ss_dssp HHHSSTTTTTCCCSCBCTTSCBCCSCCSTTCCSCTTEECTTTHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 13467887789957872489736676667676778865502888778998887505888455799999999999875026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~~G~~~~~~~~~g~~a~~a~a~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~L~~ll~lsG~~r~~ 400 (404)
T d1h12a_ 321 SKNCYEQVYSYGGAQNRGCAGEGQKAANAVALLASTNAGQANEFFNEFWSLSQPTGDYRYYNGSLYMLAMLHVSGNFKFY 400 (404)
T ss_dssp TTSSCBSCEETTEECSSCBCCHHHHHHHHHHGGGCCCHHHHHHHHHHHHTCCCCCSTTHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 88877631316896478888889999999999864793789999999970357888888789999999999963984772
Q ss_pred ---C
Q ss_conf ---6
Q 001706 633 ---S 633 (1024)
Q Consensus 633 ---~ 633 (1024)
-
T Consensus 401 ~~~~ 404 (404)
T d1h12a_ 401 NNTF 404 (404)
T ss_dssp CCC-
T ss_pred CCCC
T ss_conf 4579
|
| >d1xksa_ b.69.14.1 (A:) Nuclear pore complex protein Nup133 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nuclear pore complex protein Nup133 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30411.71 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~ve~~g~~LPv~V~EaLt~a~~~~~~s~~~s~~G~awvv~g~~l~VW~y~~s~~~~~~~C~~L~LP~sdl~~~a~ 80 (403)
T d1xksa_ 1 ESVNYDVKTFGSSLPVKVMEALTLAEVDDQLTINIDEGGWACLVCKEKLIIWKIALSPITKLSVCKELQLPPSDFHWSAD 80 (403)
T ss_dssp CCSSEEEEECSSCCCHHHHHHHHHCCTTSCEEEEECTTSEEEEEETTEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 97542676778987688998862057887447999899679999799999971578887787521797189645455676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Lv~v~~~~~~~~~~~~~~~gvi~vs~tG~VryW~sI~~~~s~~e~~i~l~~~E~~~~l~~~e~~g~ilatstg~l~l~~~ 160 (403)
T d1xksa_ 81 LVALSYSSPSGEAHSTQAVAVMVATREGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIP 160 (403)
T ss_dssp GEEEEECC-------CTTEEEEEECTTCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCEEEECHHCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCEEEEEEEC
T ss_conf 56761367767667887657999979921898710255766423431368966899888507842999947514999923
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~l~~~~L~~~~g~l~Gi~~~~sSl~~~~~~~~~~~~~s~~~~~~~~~v~~ls~~~lq~W~l~~~~e~~~~~~di~~ 240 (403)
T d1xksa_ 161 ESSGKIHQHILPQGQGMLSGIGRKVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTSSNISKWELDDSSEKHAYSWDINR 240 (403)
T ss_dssp CTTSCEEEEECTTCCCC------------------CCCCEEEEEEETTTTEEEEEESSEEEEEEECSSCEEEEEEEEHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHH
T ss_conf 78982899993588754555334542002124775434211133455314999977995478980389861567513789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~i~e~~~~~i~~~~~~~~~~~~~i~~~~LD~~~~~~g~~iL~~~~~~~~~~~~~yy~L~ti~~~~~~~~~~~~~~l~~~~ 320 (403)
T d1xksa_ 241 ALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYN 320 (403)
T ss_dssp HHHHHHHHHHHTTSTTHHHHHTTCEEEEEEEEEETTEEEEEEEEECTTSSSCBEEEEEEEECCBTTBCCSCEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf 99999998752023556565444305998875848976999999732668870799999998278713788999867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~~~rl~vp~p~~~~ayv~~~~~V~~~~~~~~~~~~~~d~I~F~~~~d~il~~~~~~~~pl~fs~~~Glv~it 400 (403)
T d1xksa_ 321 PPFQSEDLILCQLTVPNFSNQTAYLYNESAVYVCSTGTGKFSLPQEKIVFNAQGDSVLGAGACGGVPIIFSRNSGLVSIT 400 (403)
T ss_dssp CBCCCGGGCCCEEECCCSSSSEEEEECSSEEEEEECTTCTTCCCCEEEECCGGGCCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEE
T ss_conf 85674434760599658998389999099899995789989984417888454677885121578769999234189995
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
+
T Consensus 401 ~~~ 403 (403)
T d1xksa_ 401 SRE 403 (403)
T ss_dssp ECC
T ss_pred CCC
T ss_conf 799
|
| >d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Multiple substrate aminotransferase, MSAT species: Thermococcus profundus [TaxId: 49899]
Probab=100.00 E-value=0 Score=30410.93 Aligned_cols=1 Identities=100% Similarity=1.002 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~s~ire~~~~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~ai 80 (403)
T d1wsta1 1 INFDSFFSEKAMLMKASEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLAL 80 (403)
T ss_dssp CCGGGGCCHHHHHCCCHHHHHHHHHHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98789999998508981899999972899958899978895206989999999999974760014889986779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 160 (403)
T d1wsta1 81 ARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEK 160 (403)
T ss_dssp HHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 99999984899876773642221178899999986268755567886303567776404540267523667743112122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S 240 (403)
T d1wsta1 161 LEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGT 240 (403)
T ss_dssp HHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHEECCCCCCCCCCCCCCCCCEEEECC
T ss_conf 00011101343212322466898786399999999998887449265345021212347887874345677770799845
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~SK~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 320 (403)
T d1wsta1 241 FSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE 320 (403)
T ss_dssp STTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55133685663444456578899999876402345530145677654114430467889999888999999999864668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l~~~~ 400 (403)
T d1wsta1 321 GVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEM 400 (403)
T ss_dssp TCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 73780788146999989999999999999997897999336636899989979999567999999999999999999998
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
=
T Consensus 401 k~~ 403 (403)
T d1wsta1 401 KRV 403 (403)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 449
|
| >d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyC species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30410.69 Aligned_cols=1 Identities=0% Similarity=-2.355 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~dP~~~~~~lR~~gPv~ri~~~~~~~~g~~~~w~vt~~~~vr~vl~d~~~fss~~~~~~~ 80 (403)
T d1ueda_ 1 DIDQVAPLLREPANFQLRTNCDPHEDNFGLRAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQS 80 (403)
T ss_dssp CCCSCCCEEECCTTTTCEETTEECHHHHHHHTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC---
T ss_pred CHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 93234767688344023117997699999995399798516776435888489979999999997598646488665644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~l~~~Dg~~h~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~ 160 (403)
T d1ueda_ 81 KSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALCE 160 (403)
T ss_dssp ------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55442202216764157815799999998686597999876179999999999874124875203566654456666677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rr~~~~~~~~~~~~~~~~~~ls~~~l~~~~~~~l 240 (403)
T d1ueda_ 161 LLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALI 240 (403)
T ss_dssp HHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 73260333456655554302301567888877777899999999999862133115555422366466888877788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~R~~~~d~~~~G~~ip~G~~V~~~~~~ 320 (403)
T d1ueda_ 241 LGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILM 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHC
T ss_conf 40104678999999999862320101122202442212333202223344322010134645589743333210001000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~rdp~~f~dP~~F~PeR~~~~~lpFG~G~r~CiG~~lA~~el~~~l~~Ll~~f~~~~l~~~~~~~~~~~~~~~~~~~lp 400 (403)
T d1ueda_ 321 ANRDEALTPDPDVLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCPDQVP 400 (403)
T ss_dssp HTTCTTTSSSTTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCBSCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCEECCEEEE
T ss_conf 25783227994243889999999979998846918999999999999999996797788988776544477510764656
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
-
T Consensus 401 v~f 403 (403)
T d1ueda_ 401 VTW 403 (403)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 569
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30409.71 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~p~~~~g~~~i~~~f~w~~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk 80 (403)
T d1hx0a2 1 EYAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFR 80 (403)
T ss_dssp CCSCCCCTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHH
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH
T ss_conf 98998889972589700076899999999999981998799496815766788999876003687771489999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Lv~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T d1hx0a2 81 DMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDC 160 (403)
T ss_dssp HHHHHHHHTTCEEEEEECCSEEEETTCCCBSCBSSCCCBBGGGTBBTTTTBCGGGBCTTTCCSTTSBCCCTTCHHHHHHS
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 99999986699799997124466655321345666764543334577788887667887656788874655771002331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~~~pDLn~~np~Vr~~~~~~l~~~~~~GvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (403)
T d1hx0a2 161 QLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE 240 (403)
T ss_dssp BGGGEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECCCCCSSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 23445864679999999999999999873977653232321678899999999875073200156775278877516830
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~~ 320 (403)
T d1hx0a2 241 AIKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARL 320 (403)
T ss_dssp SSCGGGGTTTSEEECHHHHHHHHHHHTTCTTCCGGGGGGTTGGGTCCCGGGEEECSCCTTGGGTCSSCGGGCCCGGGHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 21022025887102243223245787641620478998750111368845057863467775556678864144456789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~a~af~lt~p~G~P~iy~gy~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~ 400 (403)
T d1hx0a2 321 YKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNV 400 (403)
T ss_dssp HHHHHHHHHHSCSSEEEEEECBCCCCCEETTEETTTTCCSSEETTEECCCCBCTTSCBCTTBCCGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987898164676306644544577667778999888874688747767778518777668999999998663
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
.
T Consensus 401 ~~g 403 (403)
T d1hx0a2 401 VDG 403 (403)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 679
|
| >d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154c1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30409.56 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~lR~~GPv~~~~~~g~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (403)
T d1gwia_ 1 ARIPLDPFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLAN 80 (403)
T ss_dssp CCEECCTTCSCHHHHHHHHHHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888987669559999998149978988479960999679999999966976133765333222466765443200003
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~ll~~dG~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~a~~~~~~~~~~~~g~~~~~~ 160 (403)
T d1gwia_ 81 PGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARL 160 (403)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 68862158857899999997640443313222447989899875321035844431034433333233221047641000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ag~~tt 240 (403)
T d1gwia_ 161 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETT 240 (403)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 00022233222222048999999999987689999987427642222111112123320123358999999987064210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~~~l~~~p~~~~~l~~~~~~l~~~i~E~lRl~pp~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rd~~~ 320 (403)
T d1gwia_ 241 ISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA 320 (403)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCCCCCHHH
T ss_conf 11445555433421589999997620100001220221275200024344687670435654632353100245677654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~pdP~~F~PeR~~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~p~~~~~~~~~~~~~~~~~lpv~~~ 400 (403)
T d1gwia_ 321 HGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLA 400 (403)
T ss_dssp HCGGGGSCCTTCCCSSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESS
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 09955434878899998376688872680199999999999999999679788888834464688655579876479995
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
.
T Consensus 401 ~~~ 403 (403)
T d1gwia_ 401 HHH 403 (403)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 079
|
| >d3b55a1 c.150.1.3 (A:40-442) Succinoglycan biosynthesis protein BC3120 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3120 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=30413.30 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~wi~~~a~pL~~~~p~~~~~Dl~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~va~E~d~~~~ 80 (403)
T d3b55a1 1 NQIAKWLEAHAKPLKTTNPTASLNDLKPLKNMVGSASIVGLGEATHGAHEVFTMKHRIVKYLVSEKGFTNLVLEEGWDRA 80 (403)
T ss_dssp HHHHHHHHHHCEEECCCCTTSCSGGGTTHHHHHTTCSEEEEEESCTTBHHHHHHHHHHHHHHHHHSCCCEEEEEEEHHHH
T ss_pred CHHHHHHHHHCEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf 95899999846718888999984779999987479739997267656079999999999999997699889994795889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~vn~yV~~g~g~~~~~~~~~w~~~e~~~li~WmR~yN~~~~~~~~v~f~G~D~~~~~~s~~~~v~~yl~~~~p~~~~~~ 160 (403)
T d3b55a1 81 LELDRYVLTGKGNPSQHLTPVFKTKEMLDLLDWIRQYNANPKHKSKVRVIGMDIQSVNENVYNNIIEYIKANNSKLLPRV 160 (403)
T ss_dssp HHHHHHHHHSCSCGGGTSCGGGCBHHHHHHHHHHHHHHHCTTCSCCCEEEEEECSCCCHHHHHHHHHHHHHHHGGGTHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 99988875488887787676435288999999999984458877842799854565205578999999986198889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 240 (403)
T d3b55a1 161 EEKIKGLIPVTKDMNTFESLTKEEKEKYVLDAKTISALLEENKSYLNGKSKEFAWIKQNARIIEQFTTMLATPPDKPADF 240 (403)
T ss_dssp HHHHHHHGGGSSSHHHHHTSCHHHHHHHHHHHHHHHHHHHHTGGGGTTTSHHHHHHHHHHHHHHHHHHHTTCCTTCTTHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99874123333465667764155578899999999999998476541274679999999999999999998456774667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~RD~~Maenl~wl~~~~~kiivwaHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~~~~~~~~ 320 (403)
T d3b55a1 241 YLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLSFIYPKVAGQHLAEYYGKRYVSIGTSVYEGQYNVKNSDGEFGP 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSEEEEEEHHHHSSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCC
T ss_conf 77899999999999870689889995705425677554557554889999884874499999734640512567788663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~v~~~~~~S~E~~l~~~~~~~~~ldlr~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~fDali~i~~~tP~ 400 (403)
T d3b55a1 321 YGTLKSDDPNSYNYIFGQVKKDQFFIDLRKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKAFDILVQIQKVSPS 400 (403)
T ss_dssp EEECCCCCTTSHHHHHHTSSCSEEEEEGGGCCHHHHHHHTSCEEEECCCSBCBTTBCSEEEECHHHHCSEEEEEEEECBC
T ss_pred EEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCC
T ss_conf 02227999988999997369986898764365331557630424045357898666754058859969589996565745
Q ss_pred --C
Q ss_conf --6
Q 001706 633 --S 633 (1024)
Q Consensus 633 --~ 633 (1024)
.
T Consensus 401 ~~~ 403 (403)
T d3b55a1 401 QVH 403 (403)
T ss_dssp CBC
T ss_pred CCC
T ss_conf 369
|
| >d2g5da1 b.52.1.4 (A:40-441) Membrane-bound lytic murein transglycosylase A, MLTA {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Neisseria gonorrhoeae [TaxId: 485]
Probab=100.00 E-value=0 Score=30339.96 Aligned_cols=1 Identities=0% Similarity=-0.725 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~~p~~~p~pa~~~~~~~~a~~~~vsf~~LpGW~~dd~~~al~af~~sC~~l~~~~~w~~~C~~a~~~~~~~~~aR~Ffe 80 (402)
T d2g5da1 1 PDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFE 80 (402)
T ss_dssp CCCCCCCCCCTTCEEEETTEEEEECCGGGSTTCTTCCHHHHHHHHHHHHHHHTTSTTCHHHHHHHHTSCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 98887899997654567764234546888889740139999999999877503246789999999717998099999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~F~p~~v~~~g~~~Gl~TGYYEP~l~gS~~r~~~y~~PlY~~P~DLv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
T d2g5da1 81 RYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGG 160 (402)
T ss_dssp HHEEEEEEEETTBSCEEEEEEEECEEEEESSCCSSCCEEEEBSCTTCEEEECC--------CEEECCCBTTBCC------
T ss_pred HHCEEEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 72789998407987525877403057653366888887734589532225555433322222222334455443334444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~dl~~~~~~~~~~~~~gR~~~~~~vPY~~R~eI~~g~l~~~~~elaW~~Dpvd~FFLqIQGSGrl~l~dG~~~rvgY 240 (402)
T d2g5da1 161 THTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGY 240 (402)
T ss_dssp -EEECTTTSCCCSCCSEEEEEEETTEEEECCCHHHHHTTTTTTSSCEEEEESCHHHHHHHHHHSCEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHEEECCCEEEEECCCCEEEEEE
T ss_conf 33354112563222101100102785134776999864875677745788378255352665263699937999899986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ag~NG~pY~sIGr~Li~~G~i~~~~~Smq~Ir~Wl~~nP~~~~ell~~NpsYVFFr~~~~~~~~GP~Ga~gvpLtp~rSi 320 (402)
T d2g5da1 241 ADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGGDGPVGALGTPLMGEYAG 320 (402)
T ss_dssp EEECCCCCCCHHHHHHTTTSSCTTSCSHHHHHHHHHHCGGGHHHHHTTCCCCEEEEEC-----CCCBCTTSSBCCTTSEE
T ss_pred CCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 36789965108999976698671128999999999979799999997499749988778888899864367756677046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 AvD~~~iPlG~pv~l~t~~p~~~~~~~rL~iAQDTGgAIkG~~R~D~f~G~G~~Ag~~AG~mk~~G~~~~LlPk~~~p~~ 400 (402)
T d2g5da1 321 AIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEY 400 (402)
T ss_dssp EECTTTSCTTCEEEEEEECTTTCSEEEEEEEEEEECTTCCSSSEEEEEEEESHHHHHHHHHCEEEEEEEEEEETTCCCCC
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 61776257887389974577778850027998515765348861698751888999887452575259999528888677
Q ss_pred -C
Q ss_conf -6
Q 001706 633 -S 633 (1024)
Q Consensus 633 -~ 633 (1024)
.
T Consensus 401 ~~ 402 (402)
T d2g5da1 401 RP 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 97
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30339.65 Aligned_cols=1 Identities=0% Similarity=1.101 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~gPL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~ 80 (402)
T d1xk7a1 1 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFL 80 (402)
T ss_dssp CCCCCCSTTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 98899969999888883780289999999998299599989999997434588516773899859998693978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Lv~~aDv~i~n~rpg~~~~lGl~~~~L~~~nP~lI~~sisgfG~~~~gp~~~~~~~D~~~qA~sG~~~~~G~~~~p~~~ 160 (402)
T d1xk7a1 81 KLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPA 160 (402)
T ss_dssp HHHTTCSEEEEECSSSHHHHTTCCHHHHHHHCTTCEEEEEESSCSSSCTTTTTSCCCHHHHHHHHTSGGGSEETTEECCC
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 98750587534101222113465421001002443213655565776765467777663212210000101455455433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~d~~~g~~aa~ailaAL~~r~~TG~Gq~VdvSm~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~y~~~D 240 (402)
T d1xk7a1 161 FPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCAD 240 (402)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCCCCBBTTBCSSBTTEEEEEETT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 44322123124431345777640345788665443432201344321111000123332222234677422458553146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 G~i~i~~~~~~~~~~l~~~~g~~~l~~dp~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~t~~e~~~~l~~~gvp~apV~ 320 (402)
T d1xk7a1 241 GYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVL 320 (402)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCGGGTTSSSSCTTCCCCBTTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCC
T ss_conf 76211233222222201121001222322233322221000366778899999999865021145566550795010478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~e~~~dpq~~~r~~~~~~~~~~~g~~~~p~~p~~fs~t~~~~~~~aP~lGeht~eIL~eLG~s~~eI~~L~~~gvi~~ 400 (402)
T d1xk7a1 321 TVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKV 400 (402)
T ss_dssp CGGGSTTCHHHHHHTCEEEEECTTSCEEEEECCSSCCSSSCCCCCCCCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSEEC
T ss_pred CHHHHHHCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEC
T ss_conf 99998779898971999988768997667305770158999887899999985499999986999999999998829868
Q ss_pred -C
Q ss_conf -6
Q 001706 633 -S 633 (1024)
Q Consensus 633 -~ 633 (1024)
.
T Consensus 401 ~~ 402 (402)
T d1xk7a1 401 ED 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=0 Score=30338.75 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~sP~d~ry~~~~~~~ifs~~~~~~~~l~ve~a~a~a~~e~G~ip~~~a~~i~~~~~d~~~i~~~e~~~~hdv~a~~~~l 80 (402)
T d1dofa_ 1 HVSPFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRLERETGHDILSLVLLL 80 (402)
T ss_dssp CCCGGGTTSSCHHHHTTSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC--------CHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 92987656498899987294999999999999999999874989889999998723388999999988589804799998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~vH~G~TsnDi~~ta~~l~~r~~~~~l~~~l~~l~~~L~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~ 160 (402)
T d1dofa_ 81 EQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYY 160 (402)
T ss_dssp HHHHCCSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 65347888502676487661598999986466788899999999999987640211003765256554229988888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~r~~~rl~~~~~~~~~~~gGa~g~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~rd~~~e~~~~L~~~a~~L~kia 240 (402)
T d1dofa_ 161 ELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLA 240 (402)
T ss_dssp HHHHHHHHHHHHHHHCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCSSCSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999875034566552224430445789999887345555235555541001688999888898999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~Di~~~s~~e~ge~~e~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~ 320 (402)
T d1dofa_ 241 VEIRELSRPEIGEVVEGGGGSSAMPHKANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALD 320 (402)
T ss_dssp HHHHHHTSTTTCSEESCC---------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 99999717753541134675410258878428998724378887888999875124432120245655302532599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~l~~~~~~l~~l~vn~erm~~~l~~s~~~i~ae~~~~~L~~~gl~~~~Ah~~v~~~~~~a~e~~k~~~e~l~~d~~~l~ 400 (402)
T d1dofa_ 321 EILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLK 400 (402)
T ss_dssp HHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCC
T ss_conf 99999999876499989999999985158667999999999869999999999999999999958985999860825147
Q ss_pred -C
Q ss_conf -6
Q 001706 633 -S 633 (1024)
Q Consensus 633 -~ 633 (1024)
.
T Consensus 401 l~ 402 (402)
T d1dofa_ 401 LC 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-ERYF species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=0 Score=30335.92 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~f~~dpy~~y~~lr~~gPv~~~~~~g~~~~vvt~~e~v~~vl~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T d1z8oa1 1 TVPDLESDSFHVDWYRTYAELRETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDV 80 (402)
T ss_dssp CCCBTTSGGGTSSHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHH
T ss_pred CCCCCCCHHHHHCHHHHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98787974566594999999983499789850895389988999999996497534483112565544564223442667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~l~~~dg~~H~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 160 (402)
T d1z8oa1 81 RNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEK 160 (402)
T ss_dssp HHHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGG
T ss_pred HHHHCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77741562016577776420212210243205677888899999875203222223333212330344556666300377
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~aG 240 (402)
T d1z8oa1 161 YRGEFGRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAG 240 (402)
T ss_dssp GTTTHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf 88888888889875065112566788899999999988999728887779999985664288787789888888873064
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 320 (402)
T d1z8oa1 241 FEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD 320 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 54315678888888765058999975013445430155654220244332134567555784134543022334452168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 p~~f~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 400 (402)
T d1z8oa1 321 PKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 400 (402)
T ss_dssp TTTSSSTTSCCTTSCCTTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEE
T ss_conf 53278911228899999988989986578139999999999999999967977578887876352787668988557996
Q ss_pred -C
Q ss_conf -6
Q 001706 633 -S 633 (1024)
Q Consensus 633 -~ 633 (1024)
.
T Consensus 401 ~~ 402 (402)
T d1z8oa1 401 DG 402 (402)
T ss_dssp TC
T ss_pred CC
T ss_conf 59
|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: N-acyl-D-glucosamine 2-epimerase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30335.92 Aligned_cols=1 Identities=0% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~l~~ilpfW~~~~~D~~~GGf~~~ld~dg~~~~~~k~~~~~~R~l~~fs~a~~~~~~~~~~~~ 80 (402)
T d1fp3a_ 1 MEKERETLQAWKERVGQELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPEL 80 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 94168999999999999999999878855807678972143789998579886365549999999999997463489899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~a~~g~~~L~~~~~~d~~~Gg~~~~vd~dG~~~~~~k~~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~i~~~~~~ 160 (402)
T d1fp3a_ 81 LDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVRE 160 (402)
T ss_dssp HHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999981883589998898878999967654564120899999899886039989999999999999998421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~g~~~~~~~~~~~~~g~~~~m~l~ea~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 240 (402)
T d1fp3a_ 161 DPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCL 240 (402)
T ss_dssp CGGGGCCCCCTTSCCEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 56888741247875434354179999999997343430579999999999998875016541257764314667666834
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~i~pGh~~e~~wLll~a~~~~~~~~~~~~a~~~~~~~~~~~g~d~~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i 320 (402)
T d1fp3a_ 241 GRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAM 320 (402)
T ss_dssp HHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 47278502359999999999873990479999999999999829557899588875378886655441377787899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~~~~~~~g~~~~~~k~~p~~~~YH~~ral~~~~~~l~~~~~~ 400 (402)
T d1fp3a_ 321 IAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKGGPFKGCFHVPRCLAMCEEMLSALLSR 400 (402)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSSCSSCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987049989999999999999986877999766743899989986677888898461899999999999999851
Q ss_pred -C
Q ss_conf -6
Q 001706 633 -S 633 (1024)
Q Consensus 633 -~ 633 (1024)
.
T Consensus 401 ~~ 402 (402)
T d1fp3a_ 401 LA 402 (402)
T ss_dssp HC
T ss_pred CC
T ss_conf 39
|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: RecA protein-like (ATPase-domain) domain: Extracellular secretion NTPase EpsE species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=30264.62 Aligned_cols=1 Identities=100% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~pi~~lv~~ll~~A~~~~ASDIHi~~~~~~~~V~~RidG~L~~~~~~~~~~~~~l~~~~ 80 (401)
T d1p9ra_ 1 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRV 80 (401)
T ss_dssp CHHHHHHC-------------CHHHHHHHHHHHHHHHHTCSEEEEEEETTEEEEEEEETTEEEEEECCCGGGHHHHHHHH
T ss_pred CHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHH
T ss_conf 95464312787344654257767999999999999982980599981788846999989998887888855699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~a~~~~~~~~~~q~g~~~~~~~~~~i~~Rv~~~p~~~g~~~vlRl~~~~~~~~~l~~LG~~~~~~~~l~~l~~~~~Gl 160 (401)
T d1p9ra_ 81 KVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 160 (401)
T ss_dssp HHHTTCCTTCCSSCEEEEEEC-----CEEEEEEEECCTTSCEEEECCEETTTTCCCGGGSCCCHHHHHHHHHHHTSSSEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCE
T ss_conf 98513678887530120022313894488754442202344566543112332001443013577789999998641054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 iLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~~ 240 (401)
T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 240 (401)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHH
T ss_conf 89876787774477999866625787469996267434567887026558767799999999984138889845768759
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ta~~a~~aa~tGhlV~tTlHa~~a~~~~~Rl~~~~~~~~~l~~~l~~vv~QrLv~~lCp~Ck~~~~~~~~~~~~~~~~~~ 320 (401)
T d1p9ra_ 241 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKK 320 (401)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHTCCHHHHHHHEEEEEEEEEEEEECTTTCEEEECCHHHHTTC-----
T ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 99999999724985899833676676654321002445667777898874205342188867688999999962354545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~~GC~~C~~~Gy~GR~~v~Evl~~d~~l~~~I~~~~~~~~l~~~~~~g~~tl~~~a~~~v~~G~~s~eEv~R~ 400 (401)
T d1p9ra_ 321 EPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRG 400 (401)
T ss_dssp CCCEEEECCCCSSSCSSSEEEEEEEEEEEECCHHHHHHHHTTCCHHHHHHHHHTTCCCHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 66379808996303799888732999998189999999984998999999998099029999999998599989998243
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
|
T Consensus 401 ~ 401 (401)
T d1p9ra_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30261.60 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 97999889872689999999999998799899996830677898769748977850654541035200799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1iira_ 81 ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQ 160 (401)
T ss_dssp HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
T ss_conf 99999999976147642774124257888988887535422344565445532356412466542100001135566566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d1iira_ 161 SAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPPP 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSSCCEECCCCCCCCCCCCCHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 77877778888999984476410233210231023235644467777654332236755676555677888763148975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~V~hgG~~t~~Eal~~ 320 (401)
T d1iira_ 241 VYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGTTHVAARA 320 (401)
T ss_dssp EEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHH
T ss_conf 99715754665689999999999769807984267764233578978997025879999545899963771699999981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~a~~~~~~~~~~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 321 GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (401)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 99999806614179999999987988876847899999999999996979999999999998750839999999999846
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
.
T Consensus 401 ~ 401 (401)
T d1iira_ 401 E 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 2-amino-3-ketobutyrate CoA ligase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30261.59 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~m~~~~~~~~~~~l~~~~~~g~~r~~~~i~~~~g~~v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 1 GSHMRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96044899999999999999759987513304788884893499889998765402546899999999999998198865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~sr~~~g~~~~~~~lE~~lA~~~g~e~al~~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d 160 (401)
T d1fc4a_ 81 SVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND 160 (401)
T ss_dssp SCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCC
T ss_conf 42131257088999999888761677447734445666789997457886899677643888705122575079975788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~di 240 (401)
T d1fc4a_ 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDI 240 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHCCCCCCCEE
T ss_conf 47899999985514567159997577789895565057898875428189800210145145799850101268888729
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g 320 (401)
T d1fc4a_ 241 ITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp EEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99651430156776111378789999871792665067888788998875431234689999999987899986401358
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~~~~pIv~v~~~~~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg~i 400 (401)
T d1fc4a_ 321 FTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVI 400 (401)
T ss_dssp CCBCCSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76379999879999799999999999999789059758899789998439999787799999999999999999984888
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 ~ 401 (401)
T d1fc4a_ 401 A 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Terpenoid cyclases/Protein prenyltransferases family: Protein prenyltransferases domain: Protein farnesyltransferase, beta-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30261.21 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~t~ts~~q~~~e~~~~~~~~~~~~~~~~~~~~L~r~~H~~y~~~~L~~lp~~~~~lD~~r 80 (401)
T d2h6fb1 1 EPLYSLRPEHARERLQDDSVETVTSIEQAKVEEKIQEVFSSYKFNHLVPRLVLQREKHFHYLKRGLRQLTDAYECLDASR 80 (401)
T ss_dssp CCCGGGSGGGGGGSCCCTTCCCHHHHHHHHHHHHHHHHHHTTCBTTBCCCCCCCHHHHHHHHHHHTTEECGGGGGGTTCH
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC
T ss_conf 97345467664331468898637889999999999999987534037865532599999999999986988760625462
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~l~yw~l~~L~LL~~~~~~~~~~~ii~~l~~~q~~~GGF~g~pg~~~hla~Ty~Al~~L~ilg~~~~~~~idR~~i~~f 160 (401)
T d2h6fb1 81 PWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQY 160 (401)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHBCTTSSBBSSTTCCBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999985998538999999999999718999968999987433999999999997177521023339999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 L~slQ~pDGsF~~~~~ge~D~R~~Y~Av~i~~lL~~~~~~~~~~~~~~I~scQ~~dGGfg~~pg~EaHgg~TfCalAaL~ 240 (401)
T d2h6fb1 161 LYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALV 240 (401)
T ss_dssp HHTTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCCCTTTTTTHHHHHHHHBCTTSSBCSSTTSCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99951888980002367766212699999999958997778999999999806888874578788763539899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lL~~~~~~d~~~l~~WL~~RQ~~~eGGF~GR~nKlvD~CYSfW~ga~l~lL~~~~~~~~~~~~~~~~~l~d~~~l~~yiL 320 (401)
T d2h6fb1 241 ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYIL 320 (401)
T ss_dssp HHTCGGGSCHHHHHHHHHHTBCTTTCSBBSSTTSCBCTTHHHHTTTHHHHHHHHHHHTTCTTCCSSCCSSCHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 84788645899999999973778778437887887635788899889999999861246631113333437999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~Q~~~GGf~d~Pg~~pD~yHT~y~L~gLSl~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~i~~~~~~~~~~~f~~~p~ 400 (401)
T d2h6fb1 321 MCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPV 400 (401)
T ss_dssp HHSBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHHEEEETTEEEECCCSSGGGCCCCCCTTTSSCHHHHHHHHHHHHTSCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 97478999948897899870088899999986577676676643235775346633798615889999999999985899
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 ~ 401 (401)
T d2h6fb1 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 9
|
| >d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450epok species: Sorangium cellulosum [TaxId: 56]
Probab=100.00 E-value=0 Score=30260.66 Aligned_cols=1 Identities=100% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~p~~~~dP~~~~~~lr~~gPv~~~~~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (401)
T d1q5da_ 1 DFKPFAPGYAEDPFPAIERLREATPIFYWDEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGL 80 (401)
T ss_dssp CCCTTSTTTTTCCHHHHHHHHHHCSEEEETTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHST
T ss_pred CCCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 97989867885949999999846998997999989983999999996598735475433454444655510233013651
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~dg~~h~~~Rk~l~~~fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1q5da_ 81 FGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRF 160 (401)
T ss_dssp TTSCHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 46888889876320421134213566788889888888876531011111578776543101100001100237888888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~i~~~~~~~l~ag 240 (401)
T d1q5da_ 161 GSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAG 240 (401)
T ss_dssp HHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999875112222101677888899999999999877754125644327889876304565207889999999987046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~etta~~l~~~l~~L~~~p~~~e~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~d~~~~g~~ip~G~~v~~~~~~~~r 320 (401)
T d1q5da_ 241 TDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALR 320 (401)
T ss_dssp SHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 32024677778999975299999864465323343210000011134433323345620257666764067421002478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 dp~~f~dP~~F~PeR~~~~~lpFg~G~r~C~G~~lA~~e~~~~la~ll~rf~~~~l~~~~~~~~~~~~r~~~~l~v~~~p 400 (401)
T d1q5da_ 321 DGTVFSRPDVFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKP 400 (401)
T ss_dssp CTTTSSSTTSCCTTSCCTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEECCCSSBCCEEECEEESSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCEEEEEC
T ss_conf 82227995434889999999998997558822999999999999999996799848899840678765686645399961
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 ~ 401 (401)
T d1q5da_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30260.56 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 94999889875689999999999998799899997834677898779748976870776421566543378999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1rrva_ 81 VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAA 160 (401)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999844898599982842668999999827974000000000102556423465556532001246788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~v 240 (401)
T d1rrva_ 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPV 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCCHHHHHHHHSSSCCE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 77765478999999983785331255430354211011133203577788689788866655459989997522479839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~I~hgG~~t~~Eal~ 320 (401)
T d1rrva_ 241 HIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATR 320 (401)
T ss_dssp EECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEECCCCHHHHHHHH
T ss_conf 99878644578899999999998626974899505443455457898899731481777621248886177248999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 321 AGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp HTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 39998980661208999999998798897574789999999999998497999999999998755179999999999857
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
.
T Consensus 401 r 401 (401)
T d1rrva_ 401 R 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 6
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30260.46 Aligned_cols=1 Identities=100% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~h~~~~~~~G~vy~wG~n~~GqLG~g~~~~~~~~P~~v~~~~~i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG 80 (401)
T d1a12a_ 1 KKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALG 80 (401)
T ss_dssp CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTC
T ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf 93106678999789889999699988889999886503577908999929999189889999679989999589998877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g 160 (401)
T d1a12a_ 81 RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 160 (401)
T ss_dssp SCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 44655664235542354220022011100101000345311202145655544666775431001100168850699820
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~l~~~g~ 240 (401)
T d1a12a_ 161 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 240 (401)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEECCCE
T ss_conf 35225650378500346687662288875344567755544335652000035677778439999936876999955981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~ 320 (401)
T d1a12a_ 241 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL 320 (401)
T ss_dssp EEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEE
T ss_pred EEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 86512221020354566310000010123554036999851012013561489788840334675678862333558888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 i~~~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~~v~~v~~G~~hs~~l~~d~~~ 400 (401)
T d1a12a_ 321 ISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 400 (401)
T ss_dssp CCSSSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEEEEEEECSSEEEEEEEECSC
T ss_pred CCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCCCCEEEEEEECCCEEEEEEECCCC
T ss_conf 57999829999308879999489969999259988778999988860789643578998899999752439999979966
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 ~ 401 (401)
T d1a12a_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Hormone binding domain of the atrial natriuretic peptide receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30259.69 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~a~~~~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~iN~~g~~~~~~~~g~~i~~~~~D~~~~~~~~~~~~~~l~~~~~ 80 (401)
T d1jdpa_ 1 EALPPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG 80 (401)
T ss_dssp CCCCCCEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEECTTSTHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99899722899997799940221678999999999999866786556789948999998289997999999999997366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~v~~iiG~~~s~~~~a~~~~~~~~~ip~is~~~~~~~~~~~~~~~~~~fr~~~~~~~~~~al~~~l~~~~~~~v~il~~ 160 (401)
T d1jdpa_ 81 AKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYS 160 (401)
T ss_dssp CCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCSGGGGCTTTTTTTEEECSCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 88089999987503678878888619854631445542122345677279831546889999999877517737999995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~i~~~~~~~g~~~~~~~ 240 (401)
T d1jdpa_ 161 DDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYA 240 (401)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHTCEEEEEEECTTSCCCHHHHHHHHHHHCSEEEEESCHHHHHHHHHHHHHTTCTTTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 68652057899998888736534899740245676268999998632574069999346889999999998188888769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~a~~~yDav 320 (401)
T d1jdpa_ 241 FFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAI 320 (401)
T ss_dssp EEEECSSCCCSTTTCTTCCSSTTHHHHHHHGGGEEEEEECCCCCHHHHHHHHHHHHHHHTTTCCCCSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 99633114643347301025542367888865414212458898689999999999984067776666207889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~l~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~~Gdr~~~~~~~~~~~~~~g~~~~Vg~~~~~~~~~~~~ 400 (401)
T d1jdpa_ 321 LLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMR 400 (401)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHSSEEEEETTEEEEECTTSBBCCEEEEEEEEETTTTEEEEEEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEE
T ss_conf 99999999998568999889999999867917717668998999882576799999997898799999998997669974
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 ~ 401 (401)
T d1jdpa_ 401 P 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]
Probab=100.00 E-value=0 Score=30258.88 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 80 (401)
T d7aata_ 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 97010689799986999999983778999588617877688899898789999999996289888889977789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T d7aata_ 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 99984247865576753885462578899999876674358985599816777640258998599689985424446665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d7aata_ 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 37888888722777618999647889855458999999999987356379998636144314886553356666532201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T d7aata_ 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 13406751330005515531021261888889888888888764033563057888998841787889999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v~ 400 (401)
T d7aata_ 321 RIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999857988863577997589953979999999998299998897179852699888999999999974
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
.
T Consensus 401 k 401 (401)
T d7aata_ 401 K 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2r7da2 b.40.4.16 (A:3-403) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Ribonuclease II family protein DR0020 species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=30258.56 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~p~~~~~~~v~ve~~~~~~~~~~~i~~~lg~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 80 (401)
T d2r7da2 1 QPELTPAQRTEVELLARGRADKSRVLRDLKLPETPEAAHALLLRLGVWDEARTPYADRLRAALNAVELPVPDFDPAEERL 80 (401)
T ss_dssp CCCCCHHHHHHHHHHHTTSCSCCHHHHHTTCCCSHHHHHHHHHHHTSSCTTCCCHHHHTTCCCSCCCCCCCCCCTTSCCE
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99899888899998123899973124522999996569999998199865566780999999863267888743334661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Dlr~l~~~tID~~~a~D~DDAisie~~~~g~~~l~VHIADVs~~v~~~s~Ld~eA~~R~tSvYlp~~~~pMLP~~ls~~~ 160 (401)
T d2r7da2 81 DLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVAKA 160 (401)
T ss_dssp ECTTSCEEEEECTTCCCCCEEEEEEECSTTCEEEEEEEECGGGTCCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHHHH
T ss_pred CCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCC
T ss_conf 52028679988998864421036787479968999961356662067776899999858464089972423758874132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 SL~~~~~r~als~~~~ld~~g~i~~~~~~~s~I~~~~ltY~~v~~~~~~~~~~l~~l~~~~~~l~~~R~~~gal~~~~~~ 240 (401)
T d2r7da2 161 GLGLHEVSPALSICLDLDPDGNAEAVDVLLTRVKVQRLAYQEAQARLEAGEEPFVTLARLARASRRLREGEGALSIDLPE 240 (401)
T ss_dssp STTSSSSEEEEEEEEEECTTSCEEEEEEEEEEECEEEEEHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 24567566541147887267872332488878998301277899886314136788888999999999866884335654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~d~~~~~~~~~~~~~s~~lVeE~MilAN~~~A~~l~~~~~p~iyR~~~~p~~~~~~~~l~~~~~~~~~~~~a~ys~ 320 (401)
T d2r7da2 241 VRVKADETGASVFPLPKPEMRTVVQECMTLAGWGTAIFADDNEIPLPFATQDYPTREVAGDTLPAMWARRKTLARTRFQP 320 (401)
T ss_dssp EEEEEETTEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCSSCCCCCSHHHHHHHHHHCCCEEEES
T ss_pred CEEEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCEEEECC
T ss_conf 20221367751002541312456676765301548999864368753103678824432110788887640044006758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~H~gLgl~~YthfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~l~~~~~~~~~~~~~~~~~er~~~~~~~~~yl~~~ 400 (401)
T d2r7da2 321 SPGPHHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAGRDPLSSKVMAAHIAESQMNADATRQAERLSRRHHTLRFIAAQ 400 (401)
T ss_dssp SCCCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98867110678606269725405789999999999769999999999999999999999999999999999999999859
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
+
T Consensus 401 p 401 (401)
T d2r7da2 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 2
|
| >d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154a1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30257.48 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~dp~~~d~~~~~~~lr~~Gpv~~~~~~g~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1odoa_ 1 ALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVEN 80 (401)
T ss_dssp CEECCTTCTTHHHHHHHHHTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCS
T ss_pred CEECCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 94358899981999999996399899964991199988999999996397724366666532223455541123304787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~~~g~~h~~~R~~l~~~fs~~~v~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~ 160 (401)
T d1odoa_ 81 MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDG 160 (401)
T ss_dssp GGGCCHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 62388599999999877651721477777788999999976422013332222321000000011221235653112123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~l~~~g~~t 240 (401)
T d1odoa_ 161 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYET 240 (401)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 44455554310102578899999999999987664136776642232112333334689799999999999998656521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~e~~R~~p~~~~~~~~~~~~d~~~~~G~~ip~Gt~v~~~~~~~hrd~ 320 (401)
T d1odoa_ 241 TVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHP 320 (401)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHCCC
T ss_conf 02355543201343214431001233311000001111112455333322346525229779617952324488870772
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 321 ~~~~dp~~F~PeR~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~ 400 (401)
T d1odoa_ 321 DWHEDADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLH 400 (401)
T ss_dssp TTSTTTTSCCTTCSCCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 22896543287878999987789884783599999999999999999779868899877771467875579874059983
Q ss_pred C
Q ss_conf 6
Q 001706 633 S 633 (1024)
Q Consensus 633 ~ 633 (1024)
.
T Consensus 401 ~ 401 (401)
T d1odoa_ 401 A 401 (401)
T ss_dssp -
T ss_pred C
T ss_conf 9
|
| >d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate transeliminase domain: Pectate transeliminase species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=0 Score=30183.96 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GDtI~v~~GtY~~~~~~~~~~~~~~~~~G~~~~ 80 (400)
T d1ru4a_ 1 ADCSSDLTSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGA 80 (400)
T ss_dssp CCCTTCTTTTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTB
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCEEECCCEEEEEECCCCCCC
T ss_conf 97532000564447769997998679998722447889999983899599998695516651205753899723777897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~i~i~~~~~~~~vi~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~n~~i~~~~~~g~~~~~~~ 160 (400)
T d1ru4a_ 81 PIYVAAANCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGG 160 (400)
T ss_dssp CEEEEEGGGCCEEEECCCCTTCCCTTCCSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSSCSEEECTTC
T ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCEEEEECCC
T ss_conf 29996079972599587623343323431787447479944342067111222023421024526852775117885555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~G~~~~~~~~~~~i~nn~~~~n~~~~~~~~~~ 240 (400)
T d1ru4a_ 161 SYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF 240 (400)
T ss_dssp CSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTC
T ss_pred CCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCEEEECEEEECCCCCCCCCCCC
T ss_conf 42179974677134565442222024689612566166433566426766368824898799775998654101456430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~n~~~~n~~~g~~~~~~~~~~~i~nN~~~~n~~~~~~~~~~~~~~~~~~~nN~~~~~~~ 320 (400)
T d1ru4a_ 241 AGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASV 320 (400)
T ss_dssp CCCCCSEECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEESSSEEEEECSCCCTTCCEEEESCEEESSCE
T ss_pred CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCE
T ss_conf 01373365047776665589877886366553040357664112265687255430343223567650798328834740
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~Spai~aG~~~~~~~~~G~~pDiGAyE~~ 400 (400)
T d1ru4a_ 321 TVSNADAKSNSWDTGPAASASDFVSLDTSLATVSRDNDGTLPETSLFRLSANSKLINAGTKESNISYSGSAPDLGAFERN 400 (400)
T ss_dssp EECSEEEESSTTTTSCCCCGGGBSBCCGGGGGCCCCTTCCCCCCSBTCBCTTCTTTTCSCCCTTCCCSTTSCCSSSCCCC
T ss_pred EEECCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34134323522546730147761674643244656777767768884378998100487877788989986776777588
|
| >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: G proteins domain: Interferon-inducible GTPase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=30183.60 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~dl~ss~~~~~~~~~~~~~~l~~e~~~~i~~~~~~~~~~~~~~~i~~~l~~~~~~~l~Iai~G~~n~GKSSLiNaL~G~~ 80 (400)
T d1tq4a_ 1 NDLPSSFTGYFKKFNTGRKIISQEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIG 80 (400)
T ss_dssp CCHHHHHHHHHTTSCGGGCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCEEEEEEECTTSSHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 96178899999877654004409899999998861777989999999997443677179998999997899999995888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~g~~~tT~~~~~~~~~~~~~~~l~DtPG~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~d~~l~~~l~~ 160 (400)
T d1tq4a_ 81 NEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM 160 (400)
T ss_dssp TTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 67775678999887044553110689707998379854333449999987433226599996588887889999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~k~~~~V~nK~D~~~~~~~~~~~~~~~~e~~l~~ir~~~~~~l~~~~~~~~~vflvS~~~~~~~d~~~L~~~l~~~L~~ 240 (400)
T d1tq4a_ 161 MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPI 240 (400)
T ss_dssp TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHSCG
T ss_pred CCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69987999708632101354322011227889999999999999874899897797337764515899999999998399
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~l~~~~~~~i~~K~~~~~~~i~~~a~~a~~~~~iP~p~~~~~~d~~~l~~~l~~y~~~fGlD~~sL~~lA~~ 320 (400)
T d1tq4a_ 241 YKRHNFMVSLPNITDSVIEKKRQFLKQRIWLEGFAADLVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLARD 320 (400)
T ss_dssp GGHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHTCCBSSCTTSSCCCHHHHHHHHHHHHHHHHHTTCSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999998516657999999899999999999999734246886303201329999999999999809998999999999
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~lka~iks~~~~~~~~~~~i~~~l~k~~~~~~~~~G~~~a~~~~f~~~~~l~~~~l~~~aedak~~l~~~~~~n 400 (400)
T d1tq4a_ 321 WEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLPKNSFLKEIFYLKYYFLDMVTEDAKTLLKEICLRN 400 (400)
T ss_dssp SSSCHHHHHHTCSHHHHTSSCCHHHHHHHHHHHHHHHHHHHCCSSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 29989999999708366555567899999999887883052389999999999999999999999999999999986559
|
| >d3ovwa_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Fusarium oxysporum [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Fusarium oxysporum [TaxId: 5507]
Probab=100.00 E-value=0 Score=30180.85 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 q~~~~t~E~HP~ltwq~CT~~ggCt~~~g~vV~D~nwrw~h~~~g~~~c~~gn~w~~~lCpd~~tCa~nC~ldGad~~~y 80 (400)
T d3ovwa_ 1 ETPDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQKNGAGCGDWGQKPNATACPDEASCAKNCILSGMDSNAY 80 (400)
T ss_dssp CEECSSCCCCCEEEEEEEETTTEEEEEEEEEEECHHHHCEECTTSCBSCCTTSCCCTTTCSSHHHHHHHCEECCCCHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887676588523265058998586233499824733244058973234388565344887566676435237664555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~GVttsG~sLtl~~vt~~~~vGsRvYLl~~d~~~Yqmf~Llg~EfTFdVD~S~lpCGlNgALYfveM~adGg~s~~~~ 160 (400)
T d3ovwa_ 81 KNAGITTSGNKLRLQQLINNQLVSPRVYLLEENKKKYEMLHLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRN 160 (400)
T ss_dssp HHTTEEEETTEEEEESEETTEECCCEEEEECTTSSSBCEECCTTCEEEEEEECTTCCTTEEEEEEEECCCTTTTGGGCTT
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 40569953881899857548832621899757877357899338678888633568764322565662167778666788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 n~aGAkYGtGYCDAQC~d~kfInG~aNv~g~GsCC~EmDIwEANs~a~a~TpH~C~~~g~~~C~g~~Cg~~g~CD~~GC~ 240 (400)
T d3ovwa_ 161 SKAGAYYGAGYCDAQCYVTPFINGVGNIKGQGVCCNELDIWEANSRATHIAPHPCSKPGLYGCTGDECGSSGICDKAGCG 240 (400)
T ss_dssp CCCTGGGTCCCCBTTCCBCSEETTEECTTCCEEECCEEEEEEECSSCEEEEEECBSSCSCEEECGGGGSTTSSBCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 76666367722113156243205621346655555641101110455320688656787336457767888860888867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 fNpYR~g~~~FyG~G~~~tVDT~k~fTVVTQF~~~~~G~L~eIrR~YVQ~GkvI~n~~~~~~g~~~~~sit~~fC~~~~~ 320 (400)
T d3ovwa_ 241 WNHNRINVTDFYGRGKQYKVDSTRKFTVTSQFVANKQGDLIELHRHYIQDNKVIESAVVNISGPPKINFINDKYCAATGA 320 (400)
T ss_dssp BCGGGGTCTTSEESSTTSSEETTSCEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCCCSSSSCSCSSBCHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 67433488754878987142379973899788708985368998999609999668875677887677346677546786
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~f~~~GGl~~mg~al~rGmVLv~SlWdd~~~~M~WLDsg~~GpC~~tsg~p~~ve~~~p~a~Vt~SNIKfG~I~STy~~ 400 (400)
T d3ovwa_ 321 NEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQGVAGPCDATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTSSV 400 (400)
T ss_dssp HHHHHTTHHHHHHHHHHHCEEEEEEEEECTTTTTHHHHBTTSCSBCSSTTSHHHHHHHCSSCEEEEEEEEEESTTCSCCC
T ss_pred CHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCCCC
T ss_conf 42443476889888850886999986847999866204898878888888855651328997799860768577763119
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Probab=100.00 E-value=0 Score=30179.57 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~l~~~l~~aekAa~iar~~~~~~~l~~~~v~ek~~~~~~~k~~~D~VT~AD~~aq~~I~~~L~~~fP~~~~~IvGEE 80 (400)
T d1inpa_ 1 MSDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEE 80 (400)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 96899999999999999999998501687767643136534626799984189999999999999987869999988158
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~IDPIDGT~~ 160 (400)
T d1inpa_ 81 SNELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQ 160 (400)
T ss_dssp CSEEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHH
T ss_pred CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 88654544311122024136666666543114542023342023231100011001232356787656299952758420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Fi~G~~~~~v~iaL~~~~~~~v~vlI~lal~~~G~Pv~GvI~~P~~~~~~~~~~~~G~~~~a~~g~Ga~~~~~~~~~~~~ 240 (400)
T d1inpa_ 161 YIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTR 240 (400)
T ss_dssp HHHCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSST
T ss_pred HCCCCCCCEEEEEHHCCCCCCCEEEEEEHHEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 12699643255500126665313565201007897898475455446400023678428997437673236766665544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~g~a~~k~~~VA~G~~D~yl~~~~~~~~WD~aA 320 (400)
T d1inpa_ 241 SNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCA 320 (400)
T ss_dssp TTSSCSSCCCCBTTBTTSSSSCCEEEECTTCCSCCCCTTTTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCBHHHHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
T ss_conf 44322201025675333454047850345389999999747954997558899999996899888995578998788799
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 g~~Il~eaGG~VtD~~G~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~N~~giIA~~~~~~h~~~l~~l~~~l~~~~~~~ 400 (400)
T d1inpa_ 321 AHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQHLAPVATHT 400 (400)
T ss_dssp HHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTTCCCCSCCC
T ss_pred HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999978997987999962466544445210014443223553101556878997888999999999997633546789
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=100.00 E-value=0 Score=30177.46 Aligned_cols=1 Identities=0% Similarity=0.703 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dl 80 (400)
T d1eh9a3 1 FNNETFLKKEDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGF 80 (400)
T ss_dssp CCSCCSCCSSSCCEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHH
T ss_pred CCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99877688768599998312307899999999875899975998899687676889999997877778858221999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 k~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR 160 (400)
T d1eh9a3 81 RKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFR 160 (400)
T ss_dssp HHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999997637713542244642577850443100211234545564435565556079999999999887524663688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (400)
T d1eh9a3 161 LDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFG 240 (400)
T ss_dssp ETTGGGCCCCSSSCHHHHHHHHHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHHHSCCCSGGGGGCC
T ss_pred EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHH
T ss_conf 60434415114565589999987533222110100468442564553352000212665310467665033210145444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~a~a~~l~~pGi 320 (400)
T d1eh9a3 241 NLDDIVKSYKDVFVYDGKYSNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYI 320 (400)
T ss_dssp SHHHHHHHHHSSCSCSSEEETTTTEEECCCCCSCCGGGEECCSCCHHHHHTTTTCCCGGGGSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 35789987543211221478999874465233304400443122046553356401267776656778999999848997
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 P~iy~G~E~G~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~lRk~~pv~ 400 (400)
T d1eh9a3 321 PMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKILIKMRKELSIA 400 (400)
T ss_dssp CEEESSGGGTCCCCCCCCCCCCSTTHHHHHHHHHHHHTCCCSCTTSHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHTCS
T ss_pred CEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 78977853288898875010266877666676405766789876552346556677657899999999999999678699
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=30176.81 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~y~~~~d~v~~~l~~~~~~~~~~~~~~~~~G~~I~TTlD~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~I 80 (400)
T d2olua2 1 TNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGL 80 (400)
T ss_dssp CCCSGGGHHHHHHHHHHHTTSTTTTTSCHHHHTTBCCEEEECCCHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
T ss_conf 99877557999999999986128766567786679988995889999999999998534214867528999998899959
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lAm~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aaale~g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~G~v~l~~Al~ 160 (400)
T d2olua2 81 VAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALR 160 (400)
T ss_dssp EEEECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHHHHHHTCCCTTBEEECCSSEEETTEEECCTTSCCCCEEEHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997888883233321000003666556178899986458721110013334421111013366655553334322355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~S~N~~~v~l~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~lg~g~~~vtplqlA~aya~iANgG~~~~P~~v~~i~~ 240 (400)
T d2olua2 161 QSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVT 240 (400)
T ss_dssp TTCHHHHHHHHHHHHHHTCTTHHHHHHHHTTCCCSSCCCHHHHTTCTTCEECHHHHHHHHHHHHTTSEEECCBCEEEEEC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCC
T ss_conf 66511123200010024567889999987088731121100000123456778886400100005964787674011356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~g~~v~~~~~~~~v~s~~~a~~l~~~l~~vv~~~Gt~~~~~~~g~~vagKTGTa~~~~~~~~~~~~~~~~~~daWFvG~ 320 (400)
T d2olua2 241 RDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGF 320 (400)
T ss_dssp TTSCEEECCCCEEECSCHHHHHHHHHHHHGGGSTTSTTTTCCCSSCCCEEEEEEECCCHHHHHHTTCCTTEESEEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 43232222222222113789999976521433541000111357814777611144576576544566687640799983
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~P~~~~~VwvG~d~~~~~~~~~~~~~~~~~~~a~i~~~~m~~~~~~~~~~f~~P~~v~~~~p~~~~~~~~~~~~~~~~~~ 400 (400)
T d2olua2 321 TPQYTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQDNNTTNRSTH 400 (400)
T ss_dssp CSSEEEEEEEEESSCCGGGTTSEESHHHHTHHHHHHHHHHHHHSCCSCCCCCCCTTEESCTTCCEETTCCCSSBCCCCCC
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 69969999984688875676765676433579999999999975689666999998766777554789999998888889
|
| >d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Old yellow enzyme (OYE) species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
Probab=100.00 E-value=0 Score=30106.27 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~p~~~~~~~LFsP~~Ig~~~lkNRiv~apm~~~~a~~~G~~~~~d~~i~yy~~rA~GG~GlIi~e~~~V~~~g~ 80 (399)
T d1oyaa_ 1 SFVKDFKPQALGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAG 80 (399)
T ss_dssp CBCTTCCCCCCTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCC
T ss_conf 97455888889999999973289988637668777667757899897987999999999972890799964377776547
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~l~~d~~i~~~k~l~~~vh~~Ga~i~~QL~H~Gr~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~p~~ 160 (399)
T d1oyaa_ 81 GYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHS 160 (399)
T ss_dssp CCTTSCBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCEEESCSSCCSCHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 78998745787998888699999975201221233220234574211334445667543566777777666567887520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 mt~~eI~~ii~~f~~AA~rA~~AGfDgVEIH~aHGYLl~qFLSp~tN~RtDeYGGSlENR~Rf~~Eii~aIR~~vg~~~I 240 (399)
T d1oyaa_ 161 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKV 240 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC
T ss_conf 15677888888999999999980975676124377789986413035665224765665457799998754340222574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 gvRls~~d~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~PV 320 (399)
T d1oyaa_ 241 GLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPV 320 (399)
T ss_dssp EEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSCTTSCTTSSCCCSCCTTHHHHHCCSCE
T ss_pred EEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 47853022025667741000577899999889874324543441122146677755454432111268999999829988
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 i~~G~i~~~~~~~~~i~~~~aDlV~~gR~liaDP~l~~K~~~G~~ln~~d~~~~~~~~~~gyt~~p~~~~~~~~~~~~~ 399 (399)
T d1oyaa_ 321 IRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMSAHGYIDYPTYEEALKLGWDKK 399 (399)
T ss_dssp EEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSSSTTTTCCCCHHHHHHTTSSCC
T ss_pred EEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 9978989869999999759981848879999791299999729998999653267899988084845499997489999
|
| >d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-NOR, nitric reductase species: Fungus (Fusarium oxysporum) [TaxId: 5507]
Probab=100.00 E-value=0 Score=30103.74 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~p~~~~~~~dP~~~~~~Lr~~gPv~~~~~~~g~~~~vvt~~~dv~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1jfba_ 1 APSFPFSRASGPEPPAEFAKLRATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKP 80 (399)
T ss_dssp CCBSSCCCSSTTSCCTHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899898766596899999996399688763789569997699999999769763547654567654544211012477
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 160 (399)
T d1jfba_ 81 TFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFNDL 160 (399)
T ss_dssp CGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 32226869999987400764566532111026789899887454321244431024566655667788887651000036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~~~~~~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt 240 (399)
T d1jfba_ 161 EYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATM 240 (399)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 78888766531000027899999999999999999998630245544322222223577762112212334322002015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~~~L~~~pe~~~~L~~e~~~~~~~~~e~lr~~~~~~~~~~R~~~~~~~~~g~~ip~G~~V~~~~~~~~~dp~~ 320 (399)
T d1jfba_ 241 VNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEV 320 (399)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
T ss_conf 66999999998456589999741345321101101232223433333222013334577676653211114451578422
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~dP~~F~PeR~~~~~~~lpFG~G~r~C~G~~lA~~el~~~l~~Ll~rfp~~~l~~~~~~~~~~~~~~~~g~~~lpv~~ 399 (399)
T d1jfba_ 321 FENPDEFNMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF 399 (399)
T ss_dssp SSSTTSCCTTCCCCSSCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCCEEEC
T ss_conf 7996445868889999886889997368069999999999999999967967899887776467787777871351039
|
| >d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp158a2 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30103.35 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~p~~~~~~~~~~~~~~~~p~~~~lr~~gPv~~~~~~~g~~~~wvvt~~e~v~~vl~d~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1s1fa_ 1 QAVPPVRDWPAVDLPGSDFDPVLTELMREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFI 80 (399)
T ss_dssp CCSCCEEECCCCCCCTTCCCHHHHHHHHHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBSSSSCS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899899887789999989999999971996898416886588996599999999769764456555555444561001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~Dg~~H~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~~~~~ 160 (399)
T d1s1fa_ 81 PARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATD 160 (399)
T ss_dssp SCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEHHCCCCCHHH
T ss_conf 33452010586778999987484347412678999999999998620234565032024554433430001104883455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~tT~ 240 (399)
T d1s1fa_ 161 RHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVT 240 (399)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 44566677887512232046788888899999999987630223201232001256655507777777888751342222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~~l~~l~~~p~~~~~~~~~~~~~~~~~~e~~r~~p~~~~~~~~R~~~~~~~l~G~~ip~Gt~V~~~~~~~~rdp~~ 320 (399)
T d1s1fa_ 241 NNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEV 320 (399)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCEECCCCCCCCCCHHH
T ss_conf 20222122343085155431232013532122211246632223432100002540533533897501233334668110
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~~~~rg~~~lpv~~~~ 399 (399)
T d1s1fa_ 321 FPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWHA 399 (399)
T ss_dssp SSSTTSCCTTC--CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEEEC
T ss_conf 6995444889999997777988617815999999999999999997798788889666525168744287047899849
|
| >d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30102.39 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~G~As~~~gttGG~~a~~~~v~~v~t~~el~~~l~~~~~~~P~vI~~~gti~~~~~~~~~~~~~~~~~~ 80 (399)
T d1bn8a_ 1 ADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKD 80 (399)
T ss_dssp CCGGGCCCCTTSSGGGSTTCCCTTTTCCGGGEEEECSHHHHHHHHCCTTCCSCEEEEECSEEESSBCTTCCBCCHHHHCC
T ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC
T ss_conf 95211113688750504898677887787746830889999999862369986699986679425665654444454334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~SNkTIiG~G~~~~i~g~gl~i~a~NVIirnl~i~ 160 (399)
T d1bn8a_ 81 PEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEFQ 160 (399)
T ss_dssp TTCCHHHHHHHTCHHHHCSSCCCSHHHHHHHHHHHHHHHHHEEEECSSEEEEECTTCCEEESCEEEECSEEEEEESCEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCEEEEECCEEEEECEEEE
T ss_conf 33353322234574342034666654322111021435522785279864984589708954579983746999592997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~DaI~i~~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~gs~~VTvS~n 240 (399)
T d1bn8a_ 161 DAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYN 240 (399)
T ss_dssp CCCCSSCEEETTSSSSCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETTCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECC
T ss_conf 17466666655666556767778658986686589988660267754444544456653333451653146404995774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~f~~h~k~~L~G~~d~~~~d~g~~~vT~hhN~f~~~~~R~Prvr~g~vHv~NNy~~n~~~~~~~~~~ya~~~~~~a~il~ 320 (399)
T d1bn8a_ 241 YYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYA 320 (399)
T ss_dssp EEEEEEECCEECCCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEE
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEECCCCCCEEEE
T ss_conf 15687524675678876434687359999327247645686303557888851767787655410002212456746999
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 EgN~F~~~~~~~~~~~~~~~~g~~~~~~gn~~~g~~~~~~~~~~~~~~~~~~p~y~y~~~~A~~v~~~V~a~AGAGkl~ 399 (399)
T d1bn8a_ 321 QNNVIDVPGLSAAKTISVFSGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN 399 (399)
T ss_dssp ESCEEECTTCCSGGGEEECTTCCBCEEESCEETTEECCHHHHTTCBSCCSCCCCSCCCCCCHHHHHHHHHHHCSTTSCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 8148878888655230102688459607847648453676676746565323456533479999998765258976159
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=100.00 E-value=0 Score=30102.07 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~syRIPsLv~~~GtlLA~ae~R~~~~~D~~~idiv~rRS~D~GkTWs~~ 80 (399)
T d2ah2a2 1 LAPGSSRVELFKRQSSKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNSLIDTVAKYSVDDGETWETQ 80 (399)
T ss_dssp CCTTCEEEEEECTTTCEEEEEETTEEEEEECSEEEEEEEEEETTEEEEEEEEESSCSCSSSCEEEEEEEESSTTSSCEEE
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCE
T ss_conf 98886434203788765775568988985699991308999899999999179888998720378998532788578762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~v~~~~~~~~~~~~dP~~v~d~~~i~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~g~tWs~p~~i~ 160 (399)
T d2ah2a2 81 IAIKNSRASSVSRVVDPTVIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLK 160 (399)
T ss_dssp EEECCCCSSTTCEEEEEEEEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCCEECG
T ss_pred EEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 89724777776666688599849969999997658886221125788876258977998646798366773258832056
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~gi~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G~TW~~g~~~~~~~~~~~~v~~~dG~l 240 (399)
T d2ah2a2 161 EFFPAEMEGMHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAFGCSEPVALEWEGKL 240 (399)
T ss_dssp GGSCSEETTEEEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCCTTCEEEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEECCCCCCEEEECCCCEECCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCEE
T ss_conf 53465335753100526775303304863731337534887468899995899851683465589875566300358818
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ll~~R~~~g~r~v~~S~DgG~TW~~~~~~~~~v~~~~~~~~~~~~~~~li~~~~~~~~~lLfsnp~~~~~~~~r~~l~l~ 320 (399)
T d2ah2a2 241 IINTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEGMRVMLFTHPLNFKGRWLRDRLNLW 320 (399)
T ss_dssp EEEEECTTSCCCEEEESSTTSSCEECTTTTTTCBCSSTTSCSCCCCCCEEEEEETTEEEEEEEEECCSSCTTCCBCEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 99876278740699974898625433454433437776667874453135741389729999798886454435642899
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~Sdd~g~~w~~~~~i~~g~saYS~L~~~dg~ig~lYE~~~~~~~~i~f~rlT~el~~ik~v~~~w~~~d~~~~~~~~~~ 399 (399)
T d2ah2a2 321 LTDNQRIYNVGQVSIGDENSAYSSVLYKDDKLYCLHEINSNEVYSLVFARLVGELRIIKSVLQSWKNWDSHLSSICTPA 399 (399)
T ss_dssp EESSSCEEEEEECSCTTCBCCCEEEEEETTEEEEEEEEEETTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EECCCCCCCCCCEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8579984214722855898542576758998999998589970059983687899999999998987547874478899
|
| >d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30035.00 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~kltl~d~~l~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvil~SH~GRP~g~~~~~~Sl~~~~~~L~ 80 (398)
T d1vpea_ 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLS 80 (398)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98762004847998999931477533995887289999999999999789989998378999998887668799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~l~~~v~f~~d~~~~~~~~~~~~l~~g~i~lLEN~Rf~~~E~~n~~~f~k~La~l~DiyVnDAFg~sHR~haS~~gi~~ 160 (398)
T d1vpea_ 81 ELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQ 160 (398)
T ss_dssp HHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGGG
T ss_pred HHHCCEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEECHHH
T ss_conf 63164079850368658899861578876897244442432333247799998605560342543566515875011345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~lps~aG~l~ekEi~~L~k~l~~~~~P~~aIlGGaKisdKi~~i~~L~~k~D~iiigG~~antfL~a~G~~iG~sl~e~~ 240 (398)
T d1vpea_ 161 FIPSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEED 240 (398)
T ss_dssp TSCEEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGG
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 46101147778789876422101467517996157635079999988875022232423789999974997788753412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~i~~~a~~~~~~i~lP~d~~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGP~G 320 (398)
T d1vpea_ 241 KIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMG 320 (398)
T ss_dssp GHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCC
T ss_conf 56789999987665288511001012110003566520213124798765321366500899998745576799974612
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~t~~~~~sIiGGGdT~aai~~~g~~~~f~hvSTGGGA~Le~L~G~~LPgi~aL~~~~a 398 (398)
T d1vpea_ 321 VFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASMRIKKA 398 (398)
T ss_dssp CTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHHTSSCCHHHHTSCBCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCC
T ss_conf 011662417999999999987238998999178999999972986796089677899999987999718999863549
|
| >d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=30032.74 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~~~~~~T~avH~G~~~~~~~~~~av~~PI~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LE 80 (398)
T d1qgna_ 1 MKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALE 80 (398)
T ss_dssp -CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 98534579976579968976898888899618830777578089899998743776796443998868999999999982
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~t~~v~~E 160 (398)
T d1qgna_ 81 GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTE 160 (398)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC
T ss_conf 99348896486468888876303455432322221011333210343456643222442210233432103563179705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 spsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~ 240 (398)
T d1qgna_ 161 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 240 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHHCCCEEEEECHHHCCCCCCEEEHHHCCHHHHHHHHHHH
T ss_conf 74300024321799999886449879961502144557722317989998100015765311100100013343221111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~G~~l~p~~a~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~ 320 (398)
T d1qgna_ 241 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 320 (398)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
T ss_conf 03677748979999998333477889999889999999999739882005788888993365554325898720466643
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 g~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~AL~~i 398 (398)
T d1qgna_ 321 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 398 (398)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 999999999972885626268788761121750113100899999965989297999761089999999999998429
|
| >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: NADH-dependent butanol dehydrogenase A (TM0820) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30029.21 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~M~~f~f~~p~~i~~G~g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~ 80 (398)
T d1vlja_ 1 HHHMENFVFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSK 80 (398)
T ss_dssp CCCCCCEEECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHH
T ss_pred CCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf 99888728758986998549999999999965998489998974787731999999999865991999867159989899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~~avi~~~~ 160 (398)
T d1vlja_ 81 VHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNGNAVITNEK 160 (398)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSSEEEEEETT
T ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEECC
T ss_conf 99876411456676688448863112788889886414556776436644367787335414654432113552132001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~K~~~~~~~~~p~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~s~~~a~~~~~~~~~~l~~~~~~~~~ 240 (398)
T d1vlja_ 161 TKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSPEISNEIAEGTIRTIMKMTERLIEKPDD 240 (398)
T ss_dssp TTEEEEEECGGGSCSEEEECGGGGGGSCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 25420232012443169985564077740001131266998866531021256434577899988740233664038987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~ar~~l~~a~~~a~~~~~~~~~~~~~g~~H~l~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~la~~l~~~~~ 320 (398)
T d1vlja_ 241 YEARANLAWSATIALNGTMAVGRRGGEWACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEG 320 (398)
T ss_dssp HHHHHHHHHHHHHHTSSTTTTTSCSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
T ss_conf 99987667789988888876530576402111112113455877022024016789999987574689999999738899
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~e~~~~~~~~l~~~~~~lglP~~L~elGi~~~~i~~ia~~a~~~~~~~~npr~~~~~~~~~l~~e~i~~Il~~A~~ 398 (398)
T d1vlja_ 321 EGEELILKGIEAFKNWLKKVGAPVSLKDAGIPEEDIDKIVDNVMLLVEKNLKPKGASLGRIMVLEREDVREILKLAAK 398 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCSTGGGTCCGGGHHHHHHHHHHHHHHTTGGGTCCSCSSSCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 819999999999999999859999989939999999999999996766427987676213334899999999999659
|
| >d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Citrobacter freundii [TaxId: 546]
Probab=100.00 E-value=0 Score=29957.00 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~d~k~~~f~T~~ih~G~~~~~~~g~v~pPI~~sST~~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg~~ 80 (397)
T d1y4ia1 1 SDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEA 80 (397)
T ss_dssp CCGGGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSCCCCSSHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99888981100376798888789992188028888650888999876347768966658988789999999999849962
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp~NP 160 (397)
T d1y4ia1 81 GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANP 160 (397)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 11106778888887763168998654301012331035431367785575414899989999865877738980487522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~ 240 (397)
T d1y4ia1 161 TLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDI 240 (397)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHT
T ss_pred CEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 11003307899886047852870275227154763202897899851351078741465215787889999999999967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~G~~l~p~~a~l~~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~~ 320 (397)
T d1y4ia1 241 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 320 (397)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
T ss_conf 49858989999997471769999999999999999999748996767488878996522223446778759999956999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGlEd~~DLi~Dl~~AL~~a~~ 397 (397)
T d1y4ia1 321 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKATF 397 (397)
T ss_dssp HHHHHHHHTCSSSEECSCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999997289362305637432032276312654589999997598929799976119999999999999987219
|
| >d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29955.49 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~r~ttfGESHG~aig~vIdG~PaG~~id~~~i~~~L~RRrpG~~~~~t~R~E~D~veilSGv~~g~TtG~PI~~~I 80 (397)
T d1q1la_ 1 SLRYLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEILSGVRFGKTLGSPIALFI 80 (397)
T ss_dssp CCSSCEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHTTCC------CCSCCEEEEESEETTEECSSCEEEEE
T ss_pred CCCEEEEECCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCEEEEE
T ss_conf 96569996034578984489980508488848999999985689899999866799984799145158980678559999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~N~D~~~~~y~~~~~~~~~~~~~~~~~pRPGHAD~~~~~KYg~~d~r~gggRsSaReTa~rVaAGaIAk~~L~~~gI~v~ 160 (397)
T d1q1la_ 81 RNRDWENWKEKMAIEGEPSPSVVPFTRPRPGHADLSGGIKYNQRDLRNILERASARETAARVAVGAVCKKFLSEFGIKIG 160 (397)
T ss_dssp ECSCC-------------------------------CTTTTTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 87876654543322356205554440488887536778874576666766514788999999999999999998498788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 s~v~~IG~i~~~~~~d~~~~~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~~r~~gDSvGG~ve~~~~gvP~GLGe 240 (397)
T d1q1la_ 161 SFVVSIGQKEVEELKDKSYFANPEKLLSYHEKAEDSELRIPFPEKDEEFKTYIDEVKEKGESLGGVFEVFALNVPPGLGS 240 (397)
T ss_dssp EEEEEETTEECGGGSSGGGGGCHHHHHHHHHHHTTSTTCCSCGGGHHHHHHHHHHHHTTTCCBCEEEEEEEESCCTTCSC
T ss_pred EEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
T ss_conf 89999866752434555445780233556887650750357656999999999999856886440699999658887667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 pv~~ddkLda~LA~AlmSIpAvKgvEfG~Gf~~a~~~GSe~nD~~~~~~~~~~~~~tN~aGGilGGISnG~pI~~rva~K 320 (397)
T d1q1la_ 241 HIQWDRRIDGRIAQAMMSIQAIKGVEIGLGFEAARRFGSQVHDEIGWSEGKGYFRHSNNLGGTEGGITNGMPIVVRVAMK 320 (397)
T ss_dssp SSSGGGCHHHHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTCCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 73444442489999875040144301265166776630235565313478873355667764245765886089999978
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 P~sSI~~~q~Tvd~~~~e~~~~~~gRhDpcivpra~~VvEAm~alvlaD~~L~k~g~d~~~~~~~~~~~y~~~~~~~ 397 (397)
T d1q1la_ 321 PIPTLKNPLRSVDIETKEEMKAGKERTDIVAVPAASVVGEAMLAIVLADALLEKLGGDFMEEVKKRFEDYVNHVKSF 397 (397)
T ss_dssp CCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 86446775636237898777502799898578763389999999999999999857984999999999999997529
|
| >d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29955.17 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~v~s~~v~y~~~~i~~~y~y~~t~v~~~~~~~~v~p~~~~~~f~t~~~vpklGVmLVG~GGnngTT~~aGv~Anr~g 80 (397)
T d1vkoa1 1 KRLIVESPNVKLEDGVLESRFTYRKNHFEHRADGLHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIFANQYA 80 (397)
T ss_dssp CCCCCCCTTEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCEEECCCEEEEEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 94488399738737558999886104999817935998767778998416688258998438840888999999998758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 L~w~tk~G~~~an~~GSltq~stirlG~~~~~~~~~~~P~kd~lPl~~p~DiVfGGWDI~~~nL~eAa~rA~VLd~~ll~ 160 (397)
T d1vkoa1 81 MTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGRAKVFEPELQE 160 (397)
T ss_dssp CEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEECSSCCCTTHHHHHHTCSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 97546677405886351443033575135789873356376517889821168944469999889999875999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~~~L~~i~P~psv~~pdfia~nq~~ra~nv~~g~~k~e~ve~Ir~DIr~Fk~~~~ldrVVVlwtAsTEr~~~~~~~v~ 240 (397)
T d1vkoa1 161 KLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLN 240 (397)
T ss_dssp HHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTT
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 99999860865542107277775135200151358889999999999999999974997699998158777777761200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~t~e~l~~ai~~n~~eIsPS~lYA~AAi~eG~pyiNgsPq~t~vPal~eLA~~~~v~iaG~DfKTLLaspliLDl~ll~e 320 (397)
T d1vkoa1 241 ATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSLLASPLIYDLAILTE 320 (397)
T ss_dssp SSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 16999999986699878859999999997599623699755666459999986199665257898755188886999996
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 l~~Ri~~k~~~~~~~~~~Vls~LS~~~KaPl~~~g~~~vn~l~kQr~~l~N~lR~~~Gl~p~~~m~lEy~~~lp~~k 397 (397)
T d1vkoa1 321 LASRVSYKVDDEYKPFHSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFFTQLPAAK 397 (397)
T ss_dssp HHTTEEEESSSSEECCCSBCGGGGGGBSSCCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGTSCCCCCC
T ss_pred HHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
T ss_conf 64178862254004752077776665268888999866028899999999999998299977754303310055579
|
| >d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29948.82 Aligned_cols=1 Identities=0% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia 80 (397)
T d3tata_ 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp CCCCCCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 96557778999488999997268998948850787738889988868999999999717666787898555899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~ 160 (397)
T d3tata_ 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred HHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHCCCEEEEEECCHHHCCCCCH
T ss_conf 99852259767767689845760377888988776533799833662667666279999869979997465142256420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i 240 (397)
T d3tata_ 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL 240 (397)
T ss_dssp HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHCCCCEE
T ss_conf 77899864066552899826899997841788999999999853694699415531001697533114554442277359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d3tata_ 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL 320 (397)
T ss_dssp ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98447665333576512110011678999988888887752256666078999999860788889999988889999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v~ 397 (397)
T d3tata_ 321 AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999848998648876898417841919999999999599995798879852599889999999999869
|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29947.01 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~p~GL~N~GNtCY~NSvLQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~i~p~ 80 (397)
T d1vjva_ 1 QFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVLPV 80 (397)
T ss_dssp CCCCCCCEECCCSSCHHHHHHHHHHHHSHHHHHHHHTCCGGGCCSCTTSTTHHHHHHHHHHHHHHHHHHHCC-CCEECCH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98789988888884079999999998089999999817741011346654322589999999999999985898714879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~QqDa~Efl~~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (397)
T d1vjva_ 81 VLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQ 160 (397)
T ss_dssp HHHHHHHHHCGGGGCBC----CBCCCCHHHHHHHHHHHHHHHHTHHHHTTTCEEEEEEEEETTEEEEEEEECCCEESCEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCCCCCEECCEEEEEEE
T ss_conf 99999999704322465566634126689999999999987733213554155120058862336644213540211233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~l~i~l~R~~~~~~~~~~~k~~~~~~~~~~ld~~ 240 (397)
T d1vjva_ 161 CHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVA 240 (397)
T ss_dssp ECCCTTCCBHHHHHHHHHEEC---------CCCCEEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBCCSEEECG
T ss_pred EEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCEEECC
T ss_conf 46326412202778764366540534555787523220423238952377766654214556110327625267077525
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d1vjva_ 241 DMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEK 320 (397)
T ss_dssp GGBCHHHHHHHHHHHHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCHHCCCHHHHCCCCCCCCCCC
T ss_conf 32110233320015676644331111477777640468766532234200011000023100110001000135632123
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~Y~L~aVv~H~G~~~~~GHY~ay~r~~~~~~~W~~~nD~~V~~v~~~~V~~~~~~~~~~~aYlLfY~r~~~ 397 (397)
T d1vjva_ 321 GENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKGFGL 397 (397)
T ss_dssp TBCSSSEEEEEEEEEEESSSTTSSEEEEEEECSSCTTCEEEEETTEEEEECHHHHHGGGCCTTSCEEEEEEEEETTC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCCEEEEEEEEECCC
T ss_conf 67899888999999996599999682899989999898999989877799889998750899888189999996489
|
| >d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Bacterial glucoamylase, C-terminal domain species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
Probab=100.00 E-value=0 Score=29946.59 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~s~~~lk~~~~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~ 80 (397)
T d1lf6a1 1 NNFNGKANSLYYNSMMILKASEDKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDY 80 (397)
T ss_dssp CCTTTTCCHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99873799999999999998047789964897677886655689889997057272599999999985997999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~~~~~~G~~~~~~~~~G~~~~~~~q~D~~g~~i~a~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lWEe~~g~~~~t 160 (397)
T d1lf6a1 81 LAKVVKDNGMIPQNTWISGKPYWTGIQLDEQADPIILSYRLKRYDLYDSLVKPLADFIIKIGPKTGQERWEEIGGYSPAT 160 (397)
T ss_dssp HHHHHHHHSSCCSCBCTTSCBCCCCCCHHHHHHHHHHHHHTTCGGGTTTTHHHHHHHHHHHCSSBSSCTTSSCCBBCHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 99995325877887886798645677776699999999999753406899999999999838887655454457864203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~aL~~~a~la~~~g~~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T d1lf6a1 161 MAAEVAGLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYD 240 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67799999999999886088157999999999999999983428356610243200146666753110001245434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~lDasll~~~~~g~~~~~d~~~~~tl~~i~~~l~~~~g~~~~~~RY~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a 320 (397)
T d1lf6a1 241 QKEIVDPSFLELVRLGVKSADDPKILNTLKVVDSTIKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERG 320 (397)
T ss_dssp GGGCCCGGGGHHHHTTSSCTTCHHHHHHHHHHHHHSEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 67776778763110378788878999999999987166777666654454555343577677667868754999999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~g~~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~a~plaWS~A~~i~~~~~l~~~~~~~~~~~~~~~~~~ 397 (397)
T d1lf6a1 321 MYEIAAGKDATPYVKAMEKFANEGGIISEQVWEDTGLPTDSASPLNWAHAEYVILFASNIEHKVLDMPDIVYKRYVA 397 (397)
T ss_dssp HHHHHTTCCCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSSCSSCHHHHHHHHHHHHHHHHTSCTTSCHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
T ss_conf 99997117999999999976688886350046989984899954788999999999998649976666788887309
|
| >d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 5-aminolevulinate synthase species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=29875.64 Aligned_cols=1 Identities=0% Similarity=-2.355 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~l~~l~~~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~ 80 (396)
T d2bwna1 1 DYNLALDKAIQKLHDEGRYRTFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSG 80 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCCEEEECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96799999999999859986342012246788740474027998289998852102768999999999999999589864
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Sr~~~G~~~~h~~LE~~lA~~~g~e~all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H 160 (396)
T d2bwna1 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH 160 (396)
T ss_dssp SBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHCCCCCCEEEEC
T ss_conf 55244587449999999999974998515540113778889998760367984310534223000143046667337632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di 240 (396)
T d2bwna1 161 NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDI 240 (396)
T ss_dssp TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCHHHCCCCEEEEE
T ss_conf 36877666776405667616999752367644466176899865424066501210110221666662233187312124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~ 320 (396)
T d2bwna1 241 FNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 320 (396)
T ss_dssp EEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 53124655533554353268999998751213453136757778899999997631207899999999999999889866
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 g~~~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw 396 (396)
T d2bwna1 321 GMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 396 (396)
T ss_dssp TCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9986899999799996999999999999999689899987899689997269998576699999999999999859
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29873.27 Aligned_cols=1 Identities=0% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~ 80 (396)
T d1m7xa3 1 VVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLY 80 (396)
T ss_dssp CCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 96641024578889986799772571477899998879999999899999982998899698887899899896867587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
T d1m7xa3 81 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFL 160 (396)
T ss_dssp EECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 71824289899999999985420333201143446786555554567863235678778778877754467772358999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 240 (396)
T d1m7xa3 161 VGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGV 240 (396)
T ss_dssp HHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTTT
T ss_pred HHHHHHHHHHHCCCCEEEECHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 99999889985786323311423122010011111111103566550289999999999863479946997521787532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d1m7xa3 241 SRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQK 320 (396)
T ss_dssp TBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHGGGTTTTTSCEEEEECGGGSSTTSCCHHHHSCSSHHHH
T ss_pred CCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 22000354320334211022344430000013444422223100111055521222344322457774223688877899
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~la~a~llt~pG~P~IYyGdEiG~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~L~~lR~~~paL~~~~~~ 396 (396)
T d1m7xa3 321 FANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFD 396 (396)
T ss_dssp HHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCGGGTSCTTS
T ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 9999999999998178547056512487899998887782111476534279999999999999739876460789
|
| >d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29871.36 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~f~~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~ 80 (396)
T d2q7wa1 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 96445547998599999998466899968830787658889989988999999999618988988997677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (396)
T d2q7wa1 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCC
T ss_conf 99861698666442013213417899999999886315650899816888430599998599067245434456542210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T d2q7wa1 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 57778988515838999568849949336889987788877048819998615354346986674286654562344211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d2q7wa1 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 33564434445777442446606899999865556665504445787899999999853913678999999999999999
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v~ 396 (396)
T d2q7wa1 321 MRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9999999999828988741564897179951879999999999689997799879952898788999999999869
|
| >d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Phase 1 flagellin superfamily: Phase 1 flagellin family: Phase 1 flagellin domain: Phase 1 flagellin species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29807.92 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~i~gl~qa~~N~~d~~s~lqtae~al~~~~~iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~ia~~T~fng~~ 80 (395)
T d1io1a_ 1 NIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVK 80 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC
T ss_conf 97138899998999999999999999999999999999999850578999999999999999999999999737028802
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Ll~Gs~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d1io1a_ 81 VLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQK 160 (395)
T ss_dssp TTTSCEEEEEECSSSTTCEEEEEECCCSTTTTTCTTCCCCCCCEEEEEECCCCSEEEEEEECBGGGSTTTCGGGCSSEEE
T ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23556725897247875058997123310001121100222322333211122222211013443222112232232100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (395)
T d1io1a_ 161 IDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAAL 240 (395)
T ss_dssp ECSSEEEETTTTEEEEEEEEETCSSCCEEEEEEECTTTCBEEESTTCCSCCTTSSCTTCCEEESEEEEEGGGCHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 01221111101110000011222221000110000133210011222111223444333210001000000120011100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (395)
T d1io1a_ 241 TAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSI 320 (395)
T ss_dssp HHTTCCSCEEEEEEEEECTTSCEEEEEEEEEETTEEEEEEECTTSCEEECBCCBBCSSSSCBCCBEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 00012233222221113421100145532112221001101222332123322222200233102222234341035412
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~v~t~~~A~~Al~~iD~Ai~~v~~~Ra~lGA~qNRle~ti~NL~~~~~N~~aar 395 (395)
T d1io1a_ 321 GGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLAAVQNRFNSAITNLGNTVNNLTSAR 395 (395)
T ss_dssp TTEEEEHHHHTTCBTTTSCCCCCCCCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 551021123455332222102466488899999999999999999998755698868999998999999998519
|
| >d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29802.40 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ld~~g~~~~~~~~~~ls~e~l~~~Yr~M~~~R~~e~~~~~l~~~G~i~~ 80 (395)
T d2bfda1 1 KPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISF 80 (395)
T ss_dssp CCCCTTCCCCCCSSCCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99899987756655455787667888806778999999884236998999999999999999999999999996897012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~GqEA~~vg~~~al~~~D~~~~~yR~h~~~la~G~~~~~~~ael~g~~~g~~~Grggs~H~~~~~~~~~~~~~ivg 160 (395)
T d2bfda1 81 YMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLA 160 (395)
T ss_dssp CCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTT
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 50898869999999997697780134445367244431789999998740035764456654443323346311344334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~yaist~~~~~~~~~~i~~ra~~ 240 (395)
T d2bfda1 161 TQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPG 240 (395)
T ss_dssp THHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGG
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHC
T ss_conf 55107888888765037654443114788754113889999986237743799986133422200210011168876310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~gi~~~~vDG~Dv~aV~~a~~~A~~~~R~g~gP~lIE~~TyR~~~Hs~~DD~~~YR~~~Ei~~w~k~DdPi~~~~~~Li~ 320 (395)
T d2bfda1 241 YGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLS 320 (395)
T ss_dssp GTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 35541688337389888888876433312687537887663588887767732466889999988549899999999998
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~g~~s~ee~~~i~~e~~~eV~~A~~~A~~~p~P~~~~l~~~VYae~p~~l~eq~~~~~~~~~~~~e~~~~~~~~~ 395 (395)
T d2bfda1 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK 395 (395)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGBCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
T ss_conf 799999999999999999999999999858997989998450159997799999999999996725388455349
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=100.00 E-value=0 Score=29797.57 Aligned_cols=1 Identities=0% Similarity=-1.888 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~ 80 (395)
T d2py6a1 1 DPLAMNDSFLAAADALAVDPMFGIPANVREVIARRGNATRLVILGTKGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYY 80 (395)
T ss_dssp CGGGHHHHHHHHHHHHHHCTTTTSCHHHHHHHHHHGGGCEEEEECSSSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEET
T ss_pred CCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEEC
T ss_conf 94116778887788754472320868899999850897528997686458999999987794699996684232286533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~pv~s~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d2py6a1 81 GLPIISTDRFTELATHDRDLVALNTCRYDGPKRFFDQICRTHGIPHLNFEQAVRAFGLQGNVDYRVDDWGADIVRNIPAF 160 (395)
T ss_dssp TEEEECHHHHHHHHHTCTTEEEEECCCSHHHHHHHHHHHHHTTCCEEEHHHHHHHTTCTTSSCGGGSCCHHHHHHTHHHH
T ss_pred CEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55751678864344226857999813641122589999876598400157778873774234402444589999869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~L~D~~S~~~~~~~l~~rl~~d~~~~~~~~~~~~~~YF~~~i~~l~kn~vfIDVGAniG~~s~~f~~~~~~~~~k 240 (395)
T d2py6a1 161 QTLAQRLADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLLRFSDSEKMVDCGASIGESLAGLIGVTKGKFER 240 (395)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHHHHCCTHHHHHHCCCGGGTTTSSSSCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSE
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf 99998713776599999999998639989985135758776543404676799899997758778899999966899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 V~aFEP~p~n~~~LkkNi~~n~~~n~~~~I~~~~~alsd~~~~~~f~~~~~~~s~~~~~~~~~~~~~~V~~~tLD~l~~~ 320 (395)
T d2py6a1 241 VWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGENTIRVPFNHEGGHGGFVKPADADHEPADLIDVRPIDDIIDD 320 (395)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSSCEEEEC--------------------CEEEEECHHHHCSS
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC
T ss_conf 99993987999999999985622255543999998961661389985179865310135667775189998788995378
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~id~IKIDVEG~E~~VLkGa~~~Lk~~kPiI~IEiyh~~~d~~~i~~~L~~l~~~Y~~~lR~h~~~~~d~vlY~~ 395 (395)
T d2py6a1 321 APTFIKMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYILSIRPDYQIGLRHHTPDRWDTCLYFY 395 (395)
T ss_dssp CCSEEEECCSSCHHHHHHTTHHHHHHHCCEEEEECCSSTTHHHHHHHHHHHHCTTCCEEEEECSSSSCCEEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEC
T ss_conf 998899968998799999789999867987999995257659999999998636974999668987501489859
|
| >d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Aldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29796.25 Aligned_cols=1 Identities=100% Similarity=0.702 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 vad~~~f~~~~~~~~~~~~~~p~~~~~l~~~GT~~~~~~~~~~g~lP~~Nf~~g~~~~a~~isge~~~~~~~~r~~~C~~ 80 (395)
T d1aora1 1 IADKQKFMLVVREKVNKLRNDPVAGGGLPKYGTAVLVNIINENGLYPVKNFQTGVYPYAYEQSGEAMAAKYLVRNKPCYA 80 (395)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSHHHHTHHHHHCGGGHHHHHHHTTCCCBTTTTBSCCTTGGGGSHHHHHHHTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 98989999999999999982970415321109299999998769877488888889971542899999986146999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Cpi~C~~~~~~~~~~~~~gpEYEt~~a~Gs~~Gi~d~~~v~~~n~l~d~~GlDtIs~G~~ia~amE~~e~Gll~~e~~gd 160 (395)
T d1aora1 81 CPIGCGRVNRLPTVGETEGPEYESVWALGANLGINDLASIIEANHMCDELGLDTISTGGTLATAMELYEKGHIKDEELGD 160 (395)
T ss_dssp CSSCCEEEEEETTTEEEECCCHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 98674834770688753687730110300124899999999999999996813887868999999999779887242066
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~l~wGd~e~~~~li~~IA~r~g~G~~LA~G~~~aae~~G~~~~a~~vkg~e~p~~dpr~~~g~~l~yat~~~G~~H~~ 240 (395)
T d1aora1 161 APPFRWGNTEVLHYYIEKIAKREGFGDKLAEGSYRLAESYGHPELSMTVKKLELPAYDPRGAEGHGLGYATNNRGGCHIK 240 (395)
T ss_dssp SCCCCTTCTHHHHHHHHHHHTTCTTHHHHTTCHHHHHHHTTCGGGCCEETTEECCSCCGGGCHHHHHHHHHCTTSSCSGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCCHHHH
T ss_conf 77879999999999999998467417888223999999959823546744777443377653132311001577640233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~e~~g~~~~~dp~~~~e~k~~~~~~~q~~~~~~dslg~C~F~~~~~~~~~~~~~~~avTG~~~t~e~l~~~geRi 320 (395)
T d1aora1 241 NYMISPEILGYPYKMDPHDVSDDKIKMLILFQDLTALIDSAGLCLFTTFGLGADDYRDLLNAALGWDFTTEDYLKIGERI 320 (395)
T ss_dssp GCTHHHHTTCSSSCCCTTCCSHHHHHHHHHHHHHHHHHHHHTCCGGGGTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 22244754389765785514379999999999999996013434413667999999999997538899999999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~l~R~fN~r~G~~~~~dD~lP~r~~~ep~~~G~~kg~~~~~e~~l~~YY~~rGWd~~G~Pt~e~L~~LgL~d~~ 395 (395)
T d1aora1 321 WNAERLFNLKAGLDPARDDTLPKRFLEEPMPEGPNKGHTVRLKEMLPRYYKLRGWTEDGKIPKEKLEELGIAEFY 395 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHSCCCHHHHHSCCCSSTTTTCCCCHHHHHHHHHHHHTCCTTSCCCHHHHHHHTCGGGC
T ss_pred HHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 999999999747983654569887724888878777876789999999999839898898799999976891339
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29796.21 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllR 80 (395)
T d1nw1a_ 1 GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLR 80 (395)
T ss_dssp CHHHHHTTCCTTCCGGGCHHHHHHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 94445045654566543615899999999986711026899301699991785334348999688775445789817999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~ 160 (395)
T d1nw1a_ 81 VYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEP 160 (395)
T ss_dssp EECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSS
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 65996116589999999999975799980899818956999734554883331465555999999999850332236675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~~~~~~~ 240 (395)
T d1nw1a_ 161 DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNI 240 (395)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC
T ss_conf 42888999999765431237776434555302444499999999999987430369846885578856376536433222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~ 320 (395)
T d1nw1a_ 241 RMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFL 320 (395)
T ss_dssp ------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34553100023444322356888827998542367885066599999997055677666532134234939999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~~~s~l~W~lW~~iq~~~~~~~fDy~~Y~~~Rl~~y~~~k~~l~~~~ 395 (395)
T d1nw1a_ 321 NYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA 395 (395)
T ss_dssp HHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTHHHHHTTC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999873666510679999999999999998857899999999646448998999999999999999999887119
|
| >d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V beta chain (RecB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29794.96 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~g~~~p~~~~w~~~~~~~~~~~~~~~~A~~~A~~I~~ll~~~~~~~~~~~~~~~~r~v~~~DIAILvR~~~~~~ 80 (395)
T d1w36b2 1 ALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAA 80 (395)
T ss_dssp TEEEEETTEEECSEEEEECCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHTTCEEEEETTEEEECCGGGEEEEESSHHHHH
T ss_pred CCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf 95367889768700210389876551309999999999999999971203653004677767788143899983766699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~i~~aL~~~gIP~v~~~~~~~l~~~~ev~~llalL~~l~~p~d~~~l~~~L~sp~~gl~~~~l~~~~~~~~~~~~~~~~~ 160 (395)
T d1w36b2 81 QVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEF 160 (395)
T ss_dssp HHHHHHHTTTCCEEETTCCCBGGGSSHHHHHHHHHHHHTCTTSHHHHHHHHHSGGGTCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999998599859935875432569999999999977455647889998708556999999998751267799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~e~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 240 (395)
T d1w36b2 161 DGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQ 240 (395)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHSSSHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCCSTTB
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999998634258999999875499999863671799999998999999998745778899999999986143231233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~daV~ImTIHkSKGLEfpvVflp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~Ee~RLlYVA 320 (395)
T d1w36b2 241 QMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVA 320 (395)
T ss_dssp CCCCTTGGGSEEEEETTTTSSCCEEEEEETTTTCCCCCCSCEEECTTTCCEEEESSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10110256508997114530677778997167668886556666555532225766465578898899999997454645
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 lTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~ 395 (395)
T d1w36b2 321 LTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQV 395 (395)
T ss_dssp HTTEEEEEEEEECCCCCSCSCCSSCCGGGGSHHHHHHTCSSCCCHHHHHHHHHHSCSTTEEEEECCCCCCCCCCC
T ss_pred HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 734726118997555666788788865778799999707888886779998987457876667789998999879
|
| >d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative alanine aminotransferase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29794.59 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~s~r~~~~~~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia 80 (395)
T d1xi9a_ 1 SIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 80 (395)
T ss_dssp CCCCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred CCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 96300040357478999999999999779970899899999789999799999999999638898899978999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~ 160 (395)
T d1xi9a_ 81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 160 (395)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 86432045231212232322220132100121047999899838833331000320597799984332235431278899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 240 (395)
T d1xi9a_ 161 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF 240 (395)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC
T ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHCC
T ss_conf 76402650899669989754101179999998555425855774121000132222345032078888899958622142
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 320 (395)
T d1xi9a_ 241 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320 (395)
T ss_dssp CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CCHHHCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 54010076685187999999999988864378784799999999986087999999999999999999999986799411
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l~er 395 (395)
T d1xi9a_ 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 395 (395)
T ss_dssp CCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 589855898178888899999999999999699999847332889979799996489999999999999999549
|
| >d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp121 monooxygenase (P450 Mt2) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=29791.23 Aligned_cols=1 Identities=0% Similarity=-1.292 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~LR~~~Pv~~~~~~~g~~~wvvt~~~dv~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
T d1n40a_ 1 TATVLLEVPFSARGDRIPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPE 80 (395)
T ss_dssp -CCCCCBSCCCCCSSSCCHHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99877789988777677399999995299789874899769997799999999769774768776677654444447817
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~d~~~H~~~R~~~~~~Fsp~~~~~~~~i~~~~~~ll~~l~~~g~~~Dlv~~~a~~l~~~vi~~llG~p~~d~~~~~ 160 (395)
T d1n40a_ 81 VVNNMGNIADAGLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLF 160 (395)
T ss_dssp GGGHHHHHHHTTCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76537871579999999987309999988789999999862033356664418888777655457777522345677777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~ 240 (395)
T d1n40a_ 161 RSLSIAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF 240 (395)
T ss_dssp HTHHHHTBCCSSCCHHHHHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 65433333200136999999999999878899875103677777666430566665540035678999875200012335
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~~l~~L~~~P~~~~~l~~e~~~~~~~i~E~lRl~~p~~~~~~R~a~~d~~i~G~~ip~G~~V~~~~~~a~rDp~~f~d 320 (395)
T d1n40a_ 241 LTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320 (395)
T ss_dssp HHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 67888877629630001110123433323320134554543212210232112234565542022201212456200898
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 P~~F~p~R~~~~~~l~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~~r~~~~LpV~~ 395 (395)
T d1n40a_ 321 PGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395 (395)
T ss_dssp TTSCCTTCSSTTCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEEC
T ss_conf 021387899998877779988369149999999999999999967997888885667461686333871216569
|
| >d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Trichomonas vaginalis, MGL1 [TaxId: 5722]
Probab=100.00 E-value=0 Score=29726.94 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~T~~vh~g~~~d~~gav~~PI~~sst~~~~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~~~a~~~ 80 (394)
T d1e5ea_ 1 ERMTPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 80 (394)
T ss_dssp CCCCHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHEECCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99997899646889989999830880488886518889998751688678534598887899999999998298502234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~~~~~i~~~t~lv~~Etp~NP~l~v 160 (394)
T d1e5ea_ 81 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKI 160 (394)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEE
T ss_conf 36228889998740233443344541320036767777630543542147899999997516456589994257763122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~ 240 (394)
T d1e5ea_ 161 IDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGS 240 (394)
T ss_dssp CCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCC
T ss_pred EHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 12444420132456708873376547645784011798899612342078743233334431468999999999973277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~lsp~~a~ll~rgl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~~~~~a 320 (394)
T d1e5ea_ 241 VISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGA 320 (394)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHH
T ss_conf 78867799999601068899999988899999997652884577577756632155530344667872454026989999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAl~~l~~ 394 (394)
T d1e5ea_ 321 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDALLR 394 (394)
T ss_dssp HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998088061535668766035785102521189999996698939799976218999999999999999639
|
| >d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29726.89 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 M~~ktl~d~d~~~K~VlvR~D~NvPi~~g~I~d~~RI~~~~pTI~~ll~~~akvvl~SH~GRPkgk~~~~~Sl~~~~~~L 80 (394)
T d1phpa_ 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRL 80 (394)
T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99785111376799999994058776099389758999999999999978998999858889999888655569999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~~v~f~~~~~~~~~~~~i~~l~~g~i~lLEN~Rf~~~E~~nd~~fak~La~l~DiyVNDAF~~aHR~haS~~gi~ 160 (394)
T d1phpa_ 81 GELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIA 160 (394)
T ss_dssp HHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGG
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCHH
T ss_conf 87406241113443567899999605789788635445354432153889974254488999665136551477511000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~lps~aG~l~ekEi~~L~~~l~~p~rP~~aIiGGaKisdKi~~i~~l~~k~D~i~igG~mantfl~a~G~~iG~sl~e~ 240 (394)
T d1phpa_ 161 HYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEE 240 (394)
T ss_dssp GTSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 02662001108999999999973899976999706763327999987875357278742287999998599667324331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~a~~i~~~~~~~~~~i~lP~D~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmG 320 (394)
T d1phpa_ 241 DKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMG 320 (394)
T ss_dssp GGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCEE
T ss_conf 14778999998776429865588630432123455662477701214786003567248999999986530589955523
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~~~a~sivGGGdT~aai~~~g~~~~~shvSTGGGA~Le~L~G~~LPgi~aL~~k 394 (394)
T d1phpa_ 321 VFEMDAFAHGTKAIAEALAEALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALEDK 394 (394)
T ss_dssp CTTSGGGCHHHHHHHHHHHHCTTCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHHTTCCCHHHHTSCBC
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 56346241899999999996589869995779999999749867885796678999999879997358785169
|
| >d1u1ha1 c.1.22.2 (A:2-395) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29723.06 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~lG~PRig~~RELK~A~E~yw~G~is~~eL~~~~~~~~~~~~~~Q~~aGid~I~~GeFs~yD~vLD~~~~~g~iP~R 80 (394)
T d1u1ha1 1 ASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPR 80 (394)
T ss_dssp CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 98767589889761899999999779999999999999999999999998599961559840258899999981996534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 f~~~~~~~~ld~yFa~arg~~~~~a~emtkwfdtnyhy~vPe~~~~~~~~l~~~~~~~~~~ea~~~g~~~Kpvl~GP~T~ 160 (394)
T d1u1ha1 81 YGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSY 160 (394)
T ss_dssp GCCCSSSCCHHHHHHHHHCBTTBCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 44445666288887887258764444554345789774577407886345540168999998763487646245778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~l~k~~~~~~~~~~~~~ll~~L~~aY~~~l~~L~~aG~~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~i~l~ 240 (394)
T d1u1ha1 161 LLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVE 240 (394)
T ss_dssp HHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHHHHHHHHHHHTTTTTTSEEEEE
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 97753247876544799999999999999999987665988986062021369999999999999999864489974378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 tyfg~~~~~~~~~l~~~~~Vd~l~lD~~~~~~~l~~~~~~~p~~k~L~~GVVdgrniw~ed~e~v~~~i~~~~~~v~~er 320 (394)
T d1u1ha1 241 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDK 320 (394)
T ss_dssp CCSSCCCHHHHHHHTTCTTCCEEEEETTTCTTHHHHHHHCCCTTCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHSCSSC
T ss_pred ECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 60488763568888636798735788523851148898758755689754681478886999999999999997379200
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 l~lspsCsLlh~P~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~r~~s~~~~n 394 (394)
T d1u1ha1 321 LVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTN 394 (394)
T ss_dssp EEEEESSCGGGSCSCGGGCCSSCHHHHHTBCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHCTTTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99938998767787174335799889845151999999999999997288308999999999998843887789
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29724.55 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~s~e~i~~l~KRRgFv~pS~EIYGGlaG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv 80 (394)
T d1atia2 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHE 80 (394)
T ss_dssp CCCCHHHHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHH
T ss_pred CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
T ss_conf 93209999999984577415712226710155768427999999999999987540477777513344898886206787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~F~D~mv~c~~~~~~~RaD~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t 160 (394)
T d1atia2 81 ATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWT 160 (394)
T ss_dssp HHCEEEEEEC--------------------------------------------------------------------CC
T ss_pred CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 88764420267777532022677665565543321134555666889999875476866525876178899889867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~FNLMF~T~iGp~~~~~~~~yLRPETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~Ei 240 (394)
T d1atia2 161 PPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEI 240 (394)
T ss_dssp CCEEEECBEEEECSSCCCGGGEEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEE
T ss_pred CCCHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 50022100012323345656336777013069999799999971567880112432211466376557756332212026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 E~Fv~P~~~~~~~~yw~~~~~~f~~~lGi~~~~lrfrqh~~~ElAHYa~~~~DiE~~fp~Gw~El~GiA~RtdyDL~~H~ 320 (394)
T d1atia2 241 EYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHT 320 (394)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETTEEEEEEEEEECTTHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCEECHHHHCCCHHHHHHHH
T ss_conf 89981785157788899999999998368833336775052355540545278999669985840413143121478776
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 k~~~~~~~~~~~~~~~~s~~~l~~~d~~~~~~~iPhVIEPS~GldR~~la~L~~ay~eee~~~~e~R~vLkl~P 394 (394)
T d1atia2 321 KDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKP 394 (394)
T ss_dssp SSTTTTTCCSCCCCCSCCCSCCCEECSSSCCEECCEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCG
T ss_pred HHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 42033202344312777663467880678907850178758882189999999876434227997259983599
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29722.05 Aligned_cols=1 Identities=0% Similarity=-1.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~p~~~~~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln 80 (394)
T d1qo7a_ 1 KAFAKFPSSASISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLN 80 (394)
T ss_dssp CTTCCCCTTCCSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99788999897787364635899999999999984478997445677753459889999999998634389899999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 81 SFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp TSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCCCEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 68975999879888999972258998779993665411899999887641135776550444345424347889998777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARME 240 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 65788999999998764047624899840765178999887512521015764034322344321000135677888777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~ 320 (394)
T d1qo7a_ 241 KFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTAS 320 (394)
T ss_dssp HHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 77775555555430125555432024520046677787642244568879999999987500132056799999842235
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v~ 394 (394)
T d1qo7a_ 321 APNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 394 (394)
T ss_dssp ------CTTTTTCEEEEEEEEECTBSSSCCCHHHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHC
T ss_conf 66222321237840687589980888532589999864684699985994781478699999999999999759
|
| >d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=29720.70 Aligned_cols=1 Identities=0% Similarity=0.503 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~ 80 (394)
T d2ay1a_ 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98778878998399999997178998978851787658889989888999999998508878988997778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 160 (394)
T d2ay1a_ 81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK 160 (394)
T ss_dssp HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred HHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHCCCCCCHHHH
T ss_conf 97365654346420003572688889988765428844999832321011899998599799941430101442202688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 240 (394)
T d2ay1a_ 161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS 240 (394)
T ss_dssp HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 88764136868999479999899989999999999875304289987525122211666664045544443245443345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 320 (394)
T d2ay1a_ 241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE 320 (394)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55666677654201030426899999865366765202423224788889887227888999999999999999999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v~~ 394 (394)
T d2ay1a_ 321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV 394 (394)
T ss_dssp HHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99999998489886036779961698519399999999996898956987899537998889999999998279
|
| >d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystalysin species: Treponema denticola [TaxId: 158]
Probab=100.00 E-value=0 Score=29719.18 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~f~~~~~r~~~~s~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~ 80 (394)
T d1c7na_ 1 MIYDFTTKISRKNLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMK 80 (394)
T ss_dssp CCCCSCCCCCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97678977677999878899999876754997688327997999889999999999857886899987999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~g~~~~~~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~ 160 (394)
T d1c7na_ 81 DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLS 160 (394)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 85599888750476334212343321034444332333467662046677654300222222245655540255666553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (394)
T d1c7na_ 161 KDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF 240 (394)
T ss_dssp TCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCC
T ss_conf 04563299945523565412569995343203454320586145532124588666410111002311103234542001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~G~R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 320 (394)
T d1c7na_ 241 NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (394)
T ss_dssp TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEC
T ss_conf 22222322223567033445555543003443222221024554200144301311121012321000121256530422
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk 394 (394)
T d1c7na_ 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK 394 (394)
T ss_dssp CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 78950489897888899999999999986999997423418899987999995899999999999999999639
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=0 Score=29717.22 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~rGvNlGgwlv~E~w~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~ 80 (394)
T d2pb1a1 1 AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNL 80 (394)
T ss_dssp CCCTTTCCEEEEECTTSSSCCTTTCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 97888977898864334305765583344313677765443201888998739687999999998604889999999977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~~~~~~~~~~~~~~~ 160 (394)
T d2pb1a1 81 GLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLN 160 (394)
T ss_dssp TCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSTTHHHHHHH
T ss_pred CCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99889998027884488877552368999999999999799189998511588666767767667644366779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d2pb1a1 161 VLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW 240 (394)
T ss_dssp HHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCC
T ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999999715887770688741356786654378999999999999997389976998488755344444315788886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~ 320 (394)
T d2pb1a1 241 NVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSC 320 (394)
T ss_dssp SEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHHHHHTCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCS
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 27985311434678655689888787663034555315676120201023005666623655342214654787655646
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~~~~~~~~~~~c~~~ 394 (394)
T d2pb1a1 321 QPLLDISQWSDEHKTDTRRYIEAQLDAFEYTGGWVFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH 394 (394)
T ss_dssp GGGSSGGGCCHHHHHHHHHHHHHHHHHHHTTTEEEESCSCCSSCGGGCHHHHHHTTCSCSSTTCCSSTTSSCCC
T ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCC
T ss_conf 66567101678899999999999999985279678963016999988889998788969991323688888999
|
| >d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29717.10 Aligned_cols=1 Identities=0% Similarity=-2.355 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~p~~~~~~~~dp~~~lr~~~p~~~~~~~~~~~~~~~w~vt~~~dv~~Vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T d1lfka_ 1 DPRPLHIRRQGLDPADELLAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPREL 80 (394)
T ss_dssp CCSCGGGCEETTEECHHHHTSCSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CC
T ss_pred CCCCHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98961104235995799997499058978888888668996799999999759864547765565444565433340432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~ll~~Dg~~H~~~R~~l~~~fs~~~v~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~~~~ 160 (394)
T d1lfka_ 81 VGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRD 160 (394)
T ss_dssp TTCGGGCCTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHH
T ss_pred CCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHH
T ss_conf 34133048756899998854331999999998899999999986520268763025676541111021100475301389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~ag~~tt~~~ 240 (394)
T d1lfka_ 161 MFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGM 240 (394)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998862233210037999999999999999999864002210000001013678989999999999998643205889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~r~~~~~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rdp~~~~d 320 (394)
T d1lfka_ 241 IGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD 320 (394)
T ss_dssp HHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999875222045543101223332110000000023321012113567121483542687401232334679212667
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 P~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~~f~~~~l~~p~~~~~~~~~~~~~g~~~lpv~~ 394 (394)
T d1lfka_ 321 VDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW 394 (394)
T ss_dssp TTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEC
T ss_conf 33218899999988878987578069999999999999999967988778886766030687777870005359
|
| >d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29715.74 Aligned_cols=1 Identities=0% Similarity=-1.855 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~y~Gg~V~~p~~G~~~~v~~lDf~SLYPsii~~~Ni~p~t~v~~~~~~~~~~~~~~~~~~~~~~~~g~lp~~ 80 (394)
T d1q8ia2 1 NLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIVRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEI 80 (394)
T ss_dssp CTTCSCCCCCCCCCCBCCCCEEEEEEEEEEETTHHHHHHHHHCCCHHHHHHHHHSCSTTTEEECSTTCEEESSSCSHHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
T ss_conf 99888998899837837999757885588831127999999679965437877678876555786543332001178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~l~~~R~~~K~~~~d~~Q~a~Ki~~NS~YG~~g~~~~~~~~~~~A~~iT~~Gr~~i~~~~~~~e~~g~~ViygDTDSi 160 (394)
T d1q8ia2 81 VTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDST 160 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEE
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999742100002321024789871221206002455521136788889888589999988631223466650356418
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~E~~~~~~~~~~kk~~~~~~kkrY~g~~~~~~~~~~ 240 (394)
T d1q8ia2 161 FVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRM 240 (394)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEECCCCTTCTTCCSCEEEEEEETTEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHEEEEHHHHHHHHHHHHHHHCCEEECCCCEE
T ss_conf 99947971245677889999998877656676665113432002553200000022112113234433000011233247
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~KG~e~vRrd~~~~~k~~~~~vl~~i~~~~~~~e~vk~~~~~l~~~~i~~~~i~~~~l~k~~~~y~~~~~~hV~~a~~~ 320 (394)
T d1q8ia2 241 VFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 320 (394)
T ss_dssp EEESSCC--CCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTGGGGCC-------------------------
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 88750014666662677898989999963626888899999987605877045044543156000356787699999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~~~~~~~g~~i~Yv~~~~~~~~~~~~~~~iD~~yYi~~qi~~~~~ril~~~~~~~~~~~~~~~~LF 394 (394)
T d1q8ia2 321 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF 394 (394)
T ss_dssp -----------------------------------CCCCHHHHHHHTHHHHHHTTGGGGTCCHHHHHHHHHCC-
T ss_pred HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
T ss_conf 98766327988899898679999899986577548998789999974089999998762788999974686889
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=0 Score=29713.34 Aligned_cols=1 Identities=0% Similarity=-0.826 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~d 80 (394)
T d2d3na2 1 TNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ 80 (394)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98627887742657889719999998999997199989979570178878889786667554434446776888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 f~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T d2d3na2 81 LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG 160 (394)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999987998999971266567664310012235765433334564443444345676556778765444445787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~ 240 (394)
T d2d3na2 161 VDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYS 240 (394)
T ss_dssp ESCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 65556668888754006888765666652323420267762155888998788876565420567314774224437767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (394)
T d2d3na2 241 FTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPSH 320 (394)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCGGG
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 89999999987408740210212366632120010033442111037899999999840760539998721511069868
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~v~fl~NHD~~r~~~~~~~~~~~~~~la~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~r~~~~~l~~~r~~~~~ 394 (394)
T d2d3na2 321 AVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQKYAY 394 (394)
T ss_dssp EEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 05767288686524455673199999999999984999679972672098998895548999999999998479
|
| >d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Cullin repeat-like family: Cullin repeat domain: Cullin homolog 1, Cul-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29721.54 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~d~~W~~L~~ai~~I~~~~~~~~~~~~~lY~~vy~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~LY~~l~~~l 80 (394)
T d1ldja2 1 LDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFL 80 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTCCC----------------------------TTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96349999999999986699997999999999999994487432000111101121000121025457999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~i~~~~~~~~~~~~L~~~~~~W~~~~~~~~~l~~if~YLdr~yv~~~~~~~~~~~~~I~~~~l~~fr~~v~~~~~ 160 (394)
T d1ldja2 81 KNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLN 160 (394)
T ss_dssp HHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSSCCC-------CCHHHHHHHTTHHHHTTTTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999877437879999999999999999999999999886689988604445666541999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~l~~~il~~I~~~R~g~~i~~~li~~~i~~l~~l~~~~~~~~~~~~~~~~Y~~~FE~~~L~~t~~~Y~~~~~~~l~~~~ 240 (394)
T d1ldja2 161 KQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 240 (394)
T ss_dssp THHHHHHHHHHTTTSCCTTCCTHHHHHHHHHHHHTSCCSSSSSCSSCCCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998678966699999999999994832323330132278878998999999999999999999998498
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~eYl~~v~~~l~eE~~r~~~yl~~~t~~~l~~~l~~~LI~~~~~~l~~~~~~ll~~~~~~~L~~lY~L~~rv~~~~~~l 320 (394)
T d1ldja2 241 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGEL 320 (394)
T ss_dssp TTSSHHHHHHHHHHHHHTTTTTTCSSSSHHHHHHHHHHHSSSSSHHHHHHHHHHHHSCCTTHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 35899999999999999999746864699999999999999999999999999987165889999999986553518999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~I~~~G~~~i~~~~~~~~~~~~~~V~~ll~l~~~~~~ii~~~F~~d~~f~~~l~~af~~fiN~n~~~~ 394 (394)
T d1ldja2 321 KKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTK 394 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999997233114578689999999999999999999859988999999999999837666689
|
| >d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-lyase (CYS3) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29646.32 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 t~~~~~~f~T~~vHag~~~d~~gav~pPI~~ssTf~~~~~~~~~~~y~YsR~gnPT~~~lE~~la~LE~~~~a~~~sSGm 80 (393)
T d1n8pa_ 1 TLQESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGS 80 (393)
T ss_dssp CCCSSCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHH
T ss_pred CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 99878981042077898899898826882788765138864535773353899868999999999971995488834701
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 aAi~~~l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~i 160 (393)
T d1n8pa_ 81 ATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKV 160 (393)
T ss_dssp HHHHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEEECCCCHHHHHCCCHHHH
T ss_conf 67776653035798344322001340344454541255225885135689999851201346723763234320203555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p 240 (393)
T d1n8pa_ 161 ADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSP 240 (393)
T ss_dssp HHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCH
T ss_conf 54444201467845998567447044770541898999816644579886026301102166999999998643888986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~a~ll~rgl~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~~~~~~ 320 (393)
T d1n8pa_ 241 FDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAAS 320 (393)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88999982775034679999998888999997336727997302334543200222103457877148999959999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGlE~~~DLi~Dl~~AL~~a~~ 393 (393)
T d1n8pa_ 321 KFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQATN 393 (393)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEECCCCCCCCCEEECCHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 9997188443561677757147376022542289999996598949799986528999999999999999649
|
| >d1xlma_ c.1.15.3 (A:) D-xylose isomerase {Arthrobacter, strain b3728 [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Arthrobacter, strain b3728 [TaxId: 1663]
Probab=100.00 E-value=0 Score=29643.44 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~~~~f~~~~Wt~~~~g~dpFG~~t~~~~d~~~~~~~~~~lG~~~~~fHd~D~~p~~~~~~e~~~~~~~~k~~l~~~ 80 (393)
T d1xlma_ 1 VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT 80 (393)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99984456417886146678899898878899999999999981998880352334888998788999999999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Gl~l~~~t~nlf~~p~~~~Ga~tnPD~~VR~~Ai~~~k~~idia~~LGa~~~v~W~G~~G~~~~~~~d~~~~~~~l~e~l 160 (393)
T d1xlma_ 81 GLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGV 160 (393)
T ss_dssp TCEEEEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98110223664334355437756959999999999999999999996898499736888677777658999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~~~a~~~g~~~~~~IEpKP~EP~~~~~~~~~~~~l~fl~~~~~~~~~gvnlD~gH~~lag~~~~~~va~a~~~gkLg 240 (393)
T d1xlma_ 161 DTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLF 240 (393)
T ss_dssp HHHHHHHHHHTCSCEEEECCCSCSSSSEESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCE
T ss_conf 99999898629885698611677775554037599999999980894204575204524441577078898998669730
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~vh~Nd~~~~~~D~Dl~~gs~~~~~~~~~~~~l~~g~~~g~~~y~G~~~fD~~~~r~~~~e~~~~~~~~~~~~~~~l~~~ 320 (393)
T d1xlma_ 241 HIDLNGQRGIKYEQELVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKER 320 (393)
T ss_dssp CCEECBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 24426787666666677885469999999999953664678787775588722667887306999999999999999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 A~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~e~L~q~~~~~l~g~~ 393 (393)
T d1xlma_ 321 ALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR 393 (393)
T ss_dssp HHHHHHCHHHHHHHHHHTTTGGGSCSSCTTCCHHHHHTCGGGTTTCCHHHHTTCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9997519999999986565021045543899889999788753699845552232689999999999970489
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29642.89 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~ 80 (393)
T d1kwga2 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWL 80 (393)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 94763584549999999999999982999899555346531888992687999999999998799999976777775343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1kwga2 81 VDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFR 160 (393)
T ss_dssp HHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 21486501245778504666666667799999999999999998771688537887403555655775443167777778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T d1kwga2 161 GWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTH 240 (393)
T ss_dssp HHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88887665299999876530022223676545676555555662565899998777677787889875421465555435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 320 (393)
T d1kwga2 241 NFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRGVGRGRFWVMEQQPGPVNW 320 (393)
T ss_dssp EECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred CCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 55566656423331256652121355555445566784223444446881688999999997347987036513666666
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~aia~G~~~~gy~~W~~~~~~~E~~~~gL~~~d~~p~~~~~~~~~~~~~l~~~~~~ 393 (393)
T d1kwga2 321 APHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQAPFAQEQMHAGLHRPDSAPDQGFFEAKRVAEELAALALP 393 (393)
T ss_dssp SSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBCCSSSTTTTSCCSBCTTSCBCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6468889867999999999977998889857557889750010014078899578999999999999974499
|
| >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cytidine deaminase-like superfamily: Cytidine deaminase-like family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC domain: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29642.09 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 g~~~~~LRYGENPHQ~aA~~~~~~~~~~~~~l~gk~SyNN~lD~daA~~lv~ef~~~~~~Pa~vIiKH~NPCGvAi~~~~ 80 (393)
T d1g8ma2 1 GVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPL 80 (393)
T ss_dssp TTTEEEESCSSSTTSCCEEEECSSSSCSEEEEESCCCHHHHHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCC
T ss_conf 99879887976805411386216874316886687027679889999999997465059976999768883366508551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~e~~~~~~~~~~~~~~~~~l~~Ay~~A~~~DP~SAFGGIIa~N~~vd~~~A~~i~~~F~EvIIAP~f~~eAleiL~~KKN 160 (393)
T d1g8ma2 81 SEEEAQVCMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 160 (393)
T ss_dssp CHHHHHHTTCTTTGGGCCHHHHHHHHHHHSCTTTTTTEEEEESSCBCHHHHHHHHTSCEEEEEESCBCHHHHHHHHHGGG
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCC
T ss_conf 02332000012211346629999999871485100050788615533210243222020100113455677888742545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lRll~~~~~~~~~~~~~~~r~i~gg~L~Q~~d~~~~~~~~~~~v~~~~~~pt~~e~~dL~FAwkVvK~vKSNAIvlak~~ 240 (393)
T d1g8ma2 161 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 240 (393)
T ss_dssp GTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETT
T ss_pred CCHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 21343024644577666367750531110123332455551343202345168899999999999862366458996298
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l 320 (393)
T d1g8ma2 241 QVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQL 320 (393)
T ss_dssp EEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf 68831899765478999999999887764063011000000134555541677651354332035566655420143112
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~g~vlASDAFFPF~D~ie~aa~~Gv~aIiQPGGSirD~evI~aan~~~i~M~fTg~RhF~H 393 (393)
T d1g8ma2 321 TEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 393 (393)
T ss_dssp CHHHHHHHHTTCCCEEEEESSCCSSTHHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 3788764430357857980268687568999998599399879874251999999998598899878867288
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29638.92 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 1 KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 91582452087636712799996999999979996998789878877654046765420477167666750015799876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999489919999822898205651245632431157896689998447886542179998389819998740477534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 10233103200014510002578986789997899989999389829998602332110000111112425638770046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCC
T ss_conf 65320112428988421001035321344431156666431023202358666001389888069877999899999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~~g 393 (393)
T d1sq9a_ 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393 (393)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEECCC
T ss_conf 9799999886876137734899999999999831246998866766312368899799999199089990899
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29639.46 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH
T ss_conf 99899989984899999999997859899994677542211012111343321577887777622797079983078999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999975110120012342101232222222222333223354078999998431242011012111223356643233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 32222235555542135455777775310012111223310233310123112777654555542223555445655300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCE
T ss_conf 15667764497268852012223455333337789998874034330466437898067999999999998761987524
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T d1i24a_ 321 MTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMT 393 (393)
T ss_dssp EEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTCCSSCCCC-
T ss_pred EECCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf 5646899889866763789999974994056999999999999999887501764588888750011224669
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29638.65 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~f~w~~~~~~~~~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt 80 (393)
T d1hvxa2 1 AAPFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGT 80 (393)
T ss_dssp CCCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCC
T ss_pred CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98988648996750668889709999997899997499989979888688889989886676555545556776878899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~df~~LV~~aH~~GIkVIlDvV~NHt~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1hvxa2 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYH 160 (393)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999987998999984355446677542110134764334455787444455556777777778776655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~giDGfR~D~a~~i~ 240 (393)
T d1hvxa2 161 FDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIK 240 (393)
T ss_dssp EEEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 78776556677676433268757556555554300101453300557737777788899998876388615642245578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~f~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T d1hvxa2 241 FSFFPDWLSYVRSQTGKPLFTVGEYWSYDINKLHNYIMKTNGTMSLFDAPLHNKFYTASKSGGTFDMRTLMTNTLMKDQP 320 (393)
T ss_dssp TTHHHHHHHHHHHHHCCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66799999999874477623551002763777777764045655003089999999987038779999999753423784
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~v~fl~NHD~~r~~~~~~~~~~~~~~~a~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~~~~i~~~~~~rk~ 393 (393)
T d1hvxa2 321 TLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARRD 393 (393)
T ss_dssp GGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 3186877578785513444587999999999999982899389883672299996999707786999997179
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=100.00 E-value=0 Score=29638.03 Aligned_cols=1 Identities=0% Similarity=1.101 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~d 80 (393)
T d1e43a2 1 VNGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSE 80 (393)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97617886766778889899999997899997599989969572689888999786567665434456766888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 f~~Lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1e43a2 81 LQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDG 160 (393)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999986998999870025557775444442235741113566654555344555667778877666555444788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~~~~~~~f 240 (393)
T d1e43a2 161 ADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSF 240 (393)
T ss_dssp ESCBTTTTBCCEEEECSSSCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 87666677677322157645555556555540202332311437714567799998766543486537861345689799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (393)
T d1e43a2 241 LRDWVQAVRQATGKEMFTVAEYWQNNAGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRKLLNGTVVSKHPLKS 320 (393)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCSTTTCGGGE
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 99999999874286057766533773776641222044430454117799999877216648899998515111680402
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 v~fl~nHD~~R~~~~~~~~~~~~~~la~a~ll~~~pG~P~IyyGdE~G~~g~~~~~~~~~~~~i~~l~~~rk~ 393 (393)
T d1e43a2 321 VTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQ 393 (393)
T ss_dssp EEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCCCCSSTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5755178773413356763479999999999982899479871573299998998867789999999998684
|
| >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=29574.15 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~g~~T~~vH~G~~~~~~~g~v~pPI~~ssT~~f~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEg~~~a~~~ 80 (392)
T d1gc0a_ 1 LPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 80 (392)
T ss_dssp CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHCEECCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEH
T ss_conf 94812020548988877899950882288887518889999862688688523289886899999999998399511101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v 160 (392)
T d1gc0a_ 81 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHM 160 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEE
T ss_conf 44789999998752369980001211110145564321024774224578667999998478787599964666321354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~ 240 (392)
T d1gc0a_ 161 ADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV 240 (392)
T ss_dssp CCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 24399999998459879983672574505867848988998665203598554431024306789898899999703886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~p~da~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~~~~~~~ 320 (392)
T d1gc0a_ 241 LSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGR 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHH
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88045799982206089999999999999999997399865786524458865332133456778379999959999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~~AL~aa~ 392 (392)
T d1gc0a_ 321 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKASA 392 (392)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 999858846671246876850108622264228999999759792969998601899999999999999629
|
| >d2d0ta1 a.266.1.2 (A:12-403) Indoleamine 2,3-dioxygenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Indoleamine 2,3-dioxygenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29568.92 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~f~vs~~~GFLp~~Pl~~LP~~y~~w~~i~~~lp~Ll~~~~lr~~V~~LP~l~~~~l~~~~~~r~a~~~lsfla~aYi 80 (392)
T d2d0ta1 1 SKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYV 80 (392)
T ss_dssp CCSSSCBTTTBTSCSSCCCCCCGGGHHHHHHHHTHHHHHHTTCHHHHHHHCCCCCSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 97334087768899984565786327999999987887755809999984786784433896999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 w~~~~~~~~~~LP~~Ia~Pl~~vs~~Lg~pP~ltYa~~~L~Nw~~~dp~~~~~~dNl~~i~~F~g~~dE~~F~lv~v~iE 160 (392)
T d2d0ta1 81 WGKGHGDVRKVLPRNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVE 160 (392)
T ss_dssp HTTSSSCCCSEECHHHHHHHHHHHHHHTCCSSCCHHHHTTSSEEESSTTSCSCGGGEEESCCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 07899977778987888999999997499986516556310310058778887330556402789974135789879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~l~~~~~~~~a~~~~d~~~~~~~l~~i~~~i~~i~~~~~~m~e~~~p~~fy~~~R~fi~G~k~~~~~p~GviYeg 240 (392)
T d2d0ta1 161 IAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGNPQLSDGLVYEG 240 (392)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCHHHHHHTHHHHTCCBSSCGGGTTCBEETT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCEECC
T ss_conf 86446999999999998767758799999999999999999998502029855621423545322437776888730036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~p~~~~G~SgaQSsii~~lD~~LGv~h~~~~~~l~~~L~~mR~YmP~~HR~Fl~~l~~~~~ir~~v~~~~~~~L~~a 320 (392)
T d2d0ta1 241 FWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFVLSKGDAGLREA 320 (392)
T ss_dssp TCSSCBCBCCCCGGGCHHHHHHHHHTTCCSSCSSSHHHHHHHHHGGGSCHHHHHHHHHHHTSCCHHHHHHTTCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf 77776426788766664089999995785668875088999999985739999999999840436788870588899999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 y~~~v~~l~~FR~~H~~~v~~YIi~~~~~~~~~~~~~~~~~~~~~~gTGGT~~~~fLk~~rd~t~~~~~~~~ 392 (392)
T d2d0ta1 321 YDACVKALVSLRSYHLQIVTKYILIPASQQPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHTC-------------------CTHHHHHHHHHHHHHHHHTCSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999886641223678888888888217885488999997767887761389
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=29566.82 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E 80 (392)
T d2pula1 1 KTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIE 80 (392)
T ss_dssp CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHH
T ss_conf 99877269989999999984998988873699807985276899995799848999617713034677788877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~ 160 (392)
T d2pula1 81 SSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 160 (392)
T ss_dssp HHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
T ss_conf 99999865057988552899859887798713577653022201542128999999999999998735033442111012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~ 240 (392)
T d2pula1 161 VKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEH 240 (392)
T ss_dssp HHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSS
T ss_pred CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCC
T ss_conf 33446578887777640104788988741065455778765520789999999874323688600335776784667599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~vID~E~a~~G~~~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T d2pula1 241 ETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLS 320 (392)
T ss_dssp CEEECCCTTCEEECTHHHHHHHHHHHHHHHHHSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTSTTHHHHHHH
T ss_pred CEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 30895226522287899999999999999740663034568999999999999999999876165500034899999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~d~~~~~g~~~~rr~~g~a~~~d~~~i~~~~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 392 (392)
T d2pula1 321 HIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCCHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 999999998889999987341444421315798889999999999999999615512999999999999709
|
| >d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Actinoplanes missouriensis [TaxId: 1866]
Probab=100.00 E-value=0 Score=29565.84 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~kfs~g~Wt~~~~g~d~FG~~tr~~~~~~e~~~~l~~lG~~g~~fHd~dl~P~~~~~~~~~~~~~~~k~~l~~t 80 (392)
T d1xima_ 1 VQATREDKFSFGLWTVGWQARDAFGDATRTALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET 80 (392)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99986673579960366768799998877754799999999985998686067877888998788999999999999863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Gl~~~~~t~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLGa~~~v~W~G~~G~~~~~~~d~~~~~~~~~e~l 160 (392)
T d1xima_ 81 GLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREAL 160 (392)
T ss_dssp TCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98234663342447143158877939999999999999999999995898379637877667876558999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~al~~i~~vg~p~~vgvnlD~gH~~~ag~~~~~~ia~a~~~gkL~ 240 (392)
T d1xima_ 161 NLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHAIAFVQELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKLF 240 (392)
T ss_dssp HHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHCCCEE
T ss_conf 99999887508885598603778887543407799999999971990036674113245433798579999998659789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 hvHlND~~~~~~D~DL~~Gs~~~~~~~~l~~~l~~g~~g~~~~~G~~~fD~~~~r~~~~~~~~~~~~~~~~~~~~l~~~a 320 (392)
T d1xima_ 241 HIDLNGQHGPKFDQDLVFGHGDLLNAFSLVDLLENGPDGAPAYDGPRHFDYKPSRTEDYDGVWESAKANIRMYLLLKERA 320 (392)
T ss_dssp CCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHSCGGGSCSCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99748998989888988898788899999999984777776777875402587677871069999999999999999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~l~~d~~~~~al~a~~~~~~~~~tl~~~~~~~~~~a~~~~~~~~~~~~~~~rg~~~~~l~q~~~~~l~~~~ 392 (392)
T d1xima_ 321 KAFRADPEVQEALAASKVAELKTPTLNPGEGYAELLADRSAFEDYDADAVGAKGFGFVKLNQLAIEHLLGAR 392 (392)
T ss_dssp HHHHHCHHHHHHHHHTTSGGGGSCSSCTTCCHHHHHHCGGGTTTCCHHHHHTSCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 998778788999998665663376556564468998767533346877786534369999999999972689
|
| >d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: PIWI domain domain: Argonaute homologue Aq 1447 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29562.07 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~f~~~l~~~~~~~G~~~~~~~~~~ 80 (392)
T d1yvua2 1 KLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSL 80 (392)
T ss_dssp ECCCCCCEECSSCCEECCSSCCHHHHHHCCCCCSCSEEEEEEEEEEC-----CHHHHHHHHHHHHHHTTTCEEEEEEEEE
T ss_pred CCCCHHHEECCCCCCCEEEECCEEHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCE
T ss_conf 92110210135899742223320224324732356634424789999631066799999999999986292645788671
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~Y~~IK~~~~~~gIptQ~i~~~tl~~~~~~~~~~NIa 160 (392)
T d1yvua2 81 ILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVA 160 (392)
T ss_dssp EECSSTTHHHHHHHHHHTTTSSCSEEEEEEC----------CHHHHHHHHHHHHTTCCCEEEEHHHHHHSCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCHHHHHHHH
T ss_conf 31277511599999998402677789999768888665554047999999985499664898866616898358999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lqinaKlGGipw~l~~~~~~~tmiIGiDv~h~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ee~~~~~~~~~l~~ 240 (392)
T d1yvua2 161 EQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSL 240 (392)
T ss_dssp HHHHHHTTCCSCEESCCTTCCSEEEEECEEECCCSSSCCCEEEEEEEECTTSCEEEEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999849834688788999759999998715888984638999999868997789998854776078999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~P~rIIi~RdG~~~~~El~~i~~a~~~~~pki~~IvV~Krh~~Rff~~~~~~~Gt~v~~~~~~~~~~~s~~~~ 320 (392)
T d1yvua2 241 LEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVY 320 (392)
T ss_dssp HHHTTCCTTCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEEECSSCCCEECSCSCCTTEEEEBSSSEEEECCSCCCS
T ss_pred HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCC
T ss_conf 99964999866999958877379999999999864995899999815882656789999998771798929999768857
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 qGT~rP~~Y~vl~d~~~~d~l~~lt~~Lc~l~~~~t~svslPapi~YA~~lA~~~r~~~~p~~~~~~~~~~l 392 (392)
T d1yvua2 321 EGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL 392 (392)
T ss_dssp TTCCCCEEEEEEECSSCHHHHHHHHHHGGGGGCCSSSCCCSCTTTTTHHHHHHHHHTCSSCCEEEESCCTTC
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 877788589998898998999999999775126718998007799999999999751178654575524219
|
| >d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29491.90 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~~T~~vh~g~~~~~~~g~v~pPi~~sst~~f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~~~a~~~~ 80 (391)
T d1cl1a_ 1 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 80 (391)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 91400360898999889984498548885362898999987527766866767899865999999999981995279851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~ 160 (391)
T d1cl1a_ 81 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 160 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGTCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 50001110222046778769983355520133322011233333200267311122233345553355303576532112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~ 240 (391)
T d1cl1a_ 161 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMV 240 (391)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCC
T ss_conf 32789998874157827998534332322111353340677623100036653334420003543210001111001357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~p~~a~ll~rgl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~e~~ 320 (391)
T d1cl1a_ 241 DADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEEL 320 (391)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
T ss_conf 85120244435316788999999999999988874465433333222204568988630589876402453388899999
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~f~d~L~l~~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVGlEd~eDLi~Dl~~AL~~i~ 391 (391)
T d1cl1a_ 321 ANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV 391 (391)
T ss_dssp HHHHTTCSSCBCCSCCCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 99997499265856778876533478222343579247659996979999561999999999999999669
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29488.83 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 97999858873689999999999998899899997803676898779848987836877734856666999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~l~~~~~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1pn3a_ 81 EWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASI 160 (391)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999730798478734471378999999980876488531224455312220056788999888778899999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 240 (391)
T d1pn3a_ 161 GLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAA 240 (391)
T ss_dssp SCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHTTSSSCCEEEECTTCCSTHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
T ss_conf 37663200024566640231542431157777771565686567655677888642115897278722431223278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~ 320 (391)
T d1pn3a_ 241 KMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVV 320 (391)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHHTTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTT
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 99999998569779994364333445688988995446879998425489852743799999982886899335567745
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l~~~~ 391 (391)
T d1pn3a_ 321 EQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAVSLEK 391 (391)
T ss_dssp BCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 29999999998798897685789999999999998399999999999999885279999999999987459
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29487.00 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~vP~g~~L~~V~vl~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~~g~LT~~G~~q~~~lG~~lr~~Y~~~~~l~~~~~~ 80 (391)
T d1nt4a_ 1 QTVPEGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP 80 (391)
T ss_dssp CCCCTTEEEEEEEEEECCCCBCCCGGGHHHHHHTCSSCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99899998849999973867999988775313477344778999856110889999999999999998760677787778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~v~vrst~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1nt4a_ 81 PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQ 160 (391)
T ss_dssp CTTSEEEEECSSHHHHHHHHHHHHHHSTTSCCCEECCSCCSSCCTTTCCCCCCCCSHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 70005886178719999999999972788777756443457777666775456652106788787764310243139999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1nt4a_ 161 LLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL 240 (391)
T ss_dssp HHHHHHTGGGSTTTTTTCCCCTTTCCCEEECCTTSCCEEESHHHHHHHHHHHHHHHHHTTCCTTTGGGGTSCSTTHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997633022144555555688888888875324766675077776599999999984899997434676769999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~~~k~~l~s~HD~ti~~~l~aLgl~~~~~p~~~~~~p~~s~~ 320 (391)
T d1nt4a_ 241 SKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKI 320 (391)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHTTTTTTTSCSEEEEECCHHHHHHHHHHTTBCCCCCTTCSSSSCTTCEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999986287688764022899999999873589886279997156689999998389866788877888976638
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~fEl~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~lCpl~~F~~~~~~~i~ 391 (391)
T d1nt4a_ 321 VFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK 391 (391)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCHHHHHHTCCCCSSSCCEEEECCBTTBCCCTTSCEEHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCCEEEEEEECCCCHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99998617888755999986376132035665430103774156479988999996689999999999739
|
| >d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cysteine desulfurase IscS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29486.57 Aligned_cols=1 Identities=0% Similarity=-0.627 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~iYlD~aa~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~ 80 (391)
T d1p3wa_ 1 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 80 (391)
T ss_dssp CCSEECBTTTCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 97498537422679999999999999864665787316659999999999999999999739997819997988999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~ 160 (391)
T d1p3wa_ 81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ 160 (391)
T ss_dssp HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCEEEC
T ss_conf 99642353057998899924654138999999997598899967887872768999975799948999978978881077
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~ 240 (391)
T d1p3wa_ 161 DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRS 240 (391)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTSC
T ss_pred CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCC
T ss_conf 78999998555895799730122577564202104653212231005788559999855021156875468856667515
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 320 (391)
T d1p3wa_ 241 GTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLA 320 (391)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSCHHHHHHHTTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCE
T ss_conf 74023334453000467887766789999999999999877624806502444567518999857877699999718977
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~~~~~~~~~~~ 391 (391)
T d1p3wa_ 321 VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ 391 (391)
T ss_dssp CBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHCC
T ss_pred EECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
T ss_conf 98262003776540599997399810069889996678899999999999999999999973967786329
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=0 Score=29485.58 Aligned_cols=1 Identities=0% Similarity=0.137 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLae~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~ 80 (391)
T d1gpea1 1 YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTT 80 (391)
T ss_dssp CCCCCCCCCGGGSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCC
T ss_conf 98600145554112791212699664999896789999999998787982999837889888873040888998860897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~dw~~~t~p~~~~r~~~~~~G~~lGGsS~in~~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~ 160 (391)
T d1gpea1 81 VDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAA 160 (391)
T ss_dssp TBCCEECCCCTTSCCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHH
T ss_pred CCCCCEEEECCCCCEEEECEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC
T ss_conf 66683413567995741121112576551430378603522334410037998644320378888765315886011035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~~~~~g~~~~~~~~~~~~~~~~~r~s~a~~~~~p~ 240 (391)
T d1gpea1 161 GHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN 240 (391)
T ss_dssp TCCCCGGGCCBSSSEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCC
T ss_conf 66766445678886432445565545789999999887548721201225765432222211320333442122025763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~r~nl~i~t~a~V~rIl~~~~~~g~ra~GV~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~ 320 (391)
T d1gpea1 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQ 320 (391)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCC
T ss_pred CCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCHHHHHHCCCCE
T ss_conf 22013443305325688650788874688658833897278998488799926120466899866797388998779988
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 v~dlP~Gvg~nl~dh~~~~v~~~~~v~~~~~l~~~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (391)
T d1gpea1 321 LLDLPVGICSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKSA 391 (391)
T ss_dssp SEECCTTCTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99897541215346766555034345477774331245686220432234443557666689998761249
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29484.81 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~v~Yei~~~~F~d~~~dg~Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h 80 (391)
T d1lwha2 1 MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFH 80 (391)
T ss_dssp CCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97999815610588999860999999855999975999899797987999999785577874712399999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~ 160 (391)
T d1lwha2 81 DSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYD 160 (391)
T ss_dssp HTTCEEEEEECTTBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCTT
T ss_pred HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 35987844331013334444433223677655664200377545676546788754333677751236668867753433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 n~~v~~~i~~~~~~w~e~gvDGfR~Daa~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1lwha2 161 NPQVFDEMKRLVLHLLDMGVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLKGIFLAEIWAEARMVDEHGRIFGYMLNFDTS 240 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEETTGGGSSSSHHHHHHHHHHHHTTCCSEEEECCCSCSSSHHHHHHHHEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCHH
T ss_conf 41146899998888760699700105588877764211588999998765300255411200011034446731134178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~~~~~~~~~~~~~~~~~a~~lllt~pG~P~IyyGdE~G~~~ 320 (391)
T d1lwha2 241 HCIKEAVWKENTRVLIESIERAVIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIKLSISILFTLPGVPLVFYGDELGMKG 320 (391)
T ss_dssp HHHHHHHHHTCTHHHHHHHHHHTSSCSSEEEEESCCTTSCCGGGGGGCCCHHHHHHHHHHHTTSSSEEEEETTGGGTCCC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCC
T ss_conf 89999874034899999998631467765000001555543334123201567999999862689987886143027768
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~r~pm~W~~~~~~~~~~~~~~~~~~~~~~~~nve~q~~~~~s~~~~~~~Li~lRk~~~al~r 391 (391)
T d1lwha2 321 VYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSHTLGWTRFRKENQWIDR 391 (391)
T ss_dssp CCCSSCGGGGSCCCCSSTTSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHHHHHHHHHHHTCGGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 98899865311888878777788888887867897423117999875816899999999999813856239
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=100.00 E-value=0 Score=29422.49 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 GgiDtHvHfi~Pqq~~~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eq 80 (390)
T d4ubpc2 1 GGIDTHVHFINPDQVDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQ 80 (390)
T ss_dssp CEEEEEEECCCTTHHHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 98220003348878999985697366468557777878745689888999999865527823115232666986799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~aGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfve~T~~a~~gRtiH~~HtEGaGGGHaPDii~~~ 160 (390)
T d4ubpc2 81 IDAGAAGLKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMA 160 (390)
T ss_dssp HHHTCCEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGG
T ss_pred HHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC
T ss_conf 98655005013113647789999999864059268985387510101165899867962111467888889883268763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~nvLpsSTnPT~Pyt~nt~~EhldM~MvcHhL~~~ipeDvafAesRiR~eTiaAEdvLHD~GaiSi~sSDsQaMGRvg 240 (390)
T d4ubpc2 161 GHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAG 240 (390)
T ss_dssp GSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 77865578999887886672666367377641479888026777763033012326777652486444136753246400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Evi~Rtwq~A~kmk~qrG~l~~d~~~~DN~RvkRYiAKyTINPAIahGish~VGSvE~GKlADG~a~~~tsvtFVSqaAi 320 (390)
T d4ubpc2 241 EMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADGDLIHDTNITFMSKSSI 320 (390)
T ss_dssp CHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCTTHHHHSCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
T ss_conf 67776778898877751489875566777013202530246806750741125764678434876345764899858887
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 d~Gi~e~LGL~k~l~pVkn~R~ItKkDMk~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 390 (390)
T d4ubpc2 321 QQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKELPMAQRYFLF 390 (390)
T ss_dssp HTTHHHHHTCCSEEEECCCCSSCCGGGSTTCCCCCCCEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred HCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCCCHHCCCCC
T ss_conf 5777677088644886058887786785015789983689986689889999046876756630120177
|
| >d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29419.01 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 mktl~d~~~~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~~~~~Sl~~v~~~l~~~ 80 (390)
T d1v6sa_ 1 MRTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPKYSLAPVGEALRAH 80 (390)
T ss_dssp CCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCSSCCGGGCSHHHHHHHHHH
T ss_pred CCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97412258789999999403777559908976899999999999997899899995589999989761379999999752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~~v~~~~~~~~~~~~~~~~~l~~g~i~lLENvRF~~~E~~nd~~f~~~La~l~DiyVNDAF~~aHR~haS~vgi~~~l 160 (390)
T d1v6sa_ 81 LPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL 160 (390)
T ss_dssp CTTEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTTCHHHHHHHGGGCSEEEECCGGGTTSCCCCCCCGGGTS
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCHHHH
T ss_conf 46532653101122122222346665378651123245521165277776652476589631466665056622501333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ps~aG~l~ekEi~~L~~~l~~~~rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~~~ 240 (390)
T d1v6sa_ 161 PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRL 240 (390)
T ss_dssp CEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 45668999999999999985446750899834640236999999997525666644177999997597668634431146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~a~~~~~~i~lp~dv~~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmGvfE 320 (390)
T d1v6sa_ 241 DLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFE 320 (390)
T ss_dssp HHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 66676777654302333333211220123677532356433310024432000134677887750264489975644502
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~F~~GT~~i~~aia~~~~a~sIiGGGdT~aai~~~g~~~~fshVSTGGGA~Le~L~G~~LPgi~aL~~ 390 (390)
T d1v6sa_ 321 VPPFDEGTLAVGQAIAALEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG 390 (390)
T ss_dssp STTTTHHHHHHHHHHHTCSSCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHHSCCHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHCC
T ss_conf 5743079999999998558997999488999999974986787179577899999977999642143159
|
| >d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus, different strains [TaxId: 11520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza B virus, different strains [TaxId: 11520]
Probab=100.00 E-value=0 Score=29416.22 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~r~ge~~~n~~~lVtREPyVSC~p~eC~~FaL~QGt~l~~kHSNgTi~DRsp~RtL 80 (390)
T d1nsca_ 1 EPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHL 80 (390)
T ss_dssp CCCCCCCCCBCSCSSEEEEEEECGGGGCCTTSCCCBEEEEEEEEEECSSCEEEEEEEEEEESSSSCCTTTTCSCCSSCEE
T ss_pred CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEE
T ss_conf 97554451210452123420227210254446674069727601018430145862054111686668841456411201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~s~~lG~~P~~~ns~f~~vaWSsssCHDGk~wl~i~vtG~d~nA~A~~~Y~g~~tdsI~SW~~nILRTQESeCvCinG~C 160 (390)
T d1nsca_ 81 ISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDC 160 (390)
T ss_dssp EEEETTSCCBTTTCEEEEECSEEEEEECSSCEEEEEEESCGGGCEEEEEETTEEEEEEECSSSSCCEECSSCCEEETTEE
T ss_pred EECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 22326799965663379987652433688724899878698872899998999964055334310200432048989989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~vvMTDGpA~~~A~~ki~~i~eGkIi~~~~l~g~~~HiEECSC~Yp~~~~V~CVCRDNW~GsNRPvv~in~~~~s~~~gY 240 (390)
T d1nsca_ 161 YLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL 240 (390)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTEEEEEECCEESCSBCEEEEEEESSSSEEEEEEECSSSCSSCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 99992688778542589998456288776058886724752115899881699970788888998499545534145315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 vCSGl~~DTPR~~D~s~tg~C~~n~~~G~~GVKGgf~~~~~~~~~~vW~GRTiS~~SRSGfE~~kV~~gw~~~~s~~~~~ 320 (390)
T d1nsca_ 241 MCTETYLDTPRPDDGSITGPCESNGDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVRYDGDPWTDSDALAH 320 (390)
T ss_dssp CCCSSCCSSSCCCTTCCCSSTTCCCSCCSSCCCCCEEEEECSSCEEEEEEECSSSSSSEEEEEEEEESSCTTTCCCCCEE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE
T ss_conf 85366578999888887767888876888863565011012468874764420476667507999778987768620005
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~q~iV~~~n~sgYSg~F~~~~k~C~~pCF~VElIRGrp~e~WTSnS~vvfCg~~s~~~~wswpDGA~i~l 390 (390)
T d1nsca_ 321 SGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL 390 (390)
T ss_dssp EEEEEEEEEECCCEEEEEEECSSSEEEEEEEEEEECCCTTSCCEEEEEEEEECSSSCCCCCCCCCCCTTC
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 7899953788862178998589853022899997288766501375699972589977866998656689
|
| >d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29412.71 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~g~~gg~~~pe~l~~~~~~l~~~~~~~~~~~~f~~e~~~~~~~~~grpTPL~~~~~Ls~~lg~~IylK~E~ln 80 (390)
T d1qopb_ 1 TTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLL 80 (390)
T ss_dssp CCSSCCEETTEEEEESCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGS
T ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEHHHHHHHHCCEEEEEEECCC
T ss_conf 98777865683999687888999999999999997397899999999874489996553758654535977999971487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ptGS~K~R~a~~~i~~A~~~G~~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~ 160 (390)
T d1qopb_ 81 HGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS 160 (390)
T ss_dssp TTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf 44656604899999987543873023103477899999999985367459963320011235888999865966999527
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~ 240 (390)
T d1qopb_ 161 GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 240 (390)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEE
T ss_conf 85136676999999976333555530343234334654110156655012389999970986306886235410111100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~f~~~~~~~~ig~ep~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~~~~s~a~gl~~~~~~~~~~~l~~~g~ 320 (390)
T d1qopb_ 241 ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGR 320 (390)
T ss_dssp GGGTTCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTS
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 11004663248613566356565444551035744554112454113688864443222455334662067899986286
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~vtD~Ea~~a~~~La~~EGI~~a~Esa~Ava~Ai~~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l 390 (390)
T d1qopb_ 321 ADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (390)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHC
T ss_conf 3999999999999999999966984168269999999998635579998899997889734799999639
|
| >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Hypothetical oxidoreductase yqhD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29411.83 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~m~~f~f~~P~~I~fG~g~l~~l~~~~~~~~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~ 80 (390)
T d1oj7a_ 1 KAGLNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNA 80 (390)
T ss_dssp CBCCCCEEEEEEEEEEESTTGGGGHHHHSCTTCEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHH
T ss_pred CCCCCCCEEECCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99888808748986898569999999998679988999897168774399999997189947999282379999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagtgse~t~~avi~~~~~ 160 (390)
T d1oj7a_ 81 VKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTT 160 (390)
T ss_dssp HHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEEEEEETTT
T ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99976337877985478854408999999751874300344312466433467873335665443111243101124443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~k~~~~~~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~~a~~~~~~~~~~l~~a~~~~~d 240 (390)
T d1oj7a_ 161 GDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPEN 240 (390)
T ss_dssp TEEEEEECGGGSCSEEEECGGGGTTCCHHHHHHHHHHHHHHHHHHHSSSCBCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCEECCCHHHCCCCEEEEHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC
T ss_conf 11000110000145046514430369744430322558888889871775321230367765555530134777760446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~ar~~l~~as~~a~~~~~~~g~~~~g~~Hal~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~ 320 (390)
T d1oj7a_ 241 YDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEG 320 (390)
T ss_dssp HHHHHHHHHHHHHHSSSTTTTTSCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999888888998865540486666531344334310268765311233221332001111599999999995485469
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~e~~~~~i~~i~~~~~~lglP~~L~e~Gv~~~~i~~la~~~~~~~~~~~~np~~l~~d~i~~il~~A~ 390 (390)
T d1oj7a_ 321 SDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR 390 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCCSGGGGTCCSTTHHHHHHHHHHTTCSSBTTTTCBCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 9699999999999999998498999899199999999999999863555309997899999999999509
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29413.11 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~ 80 (390)
T d1ud2a2 1 DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK 80 (390)
T ss_dssp CCCCCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99777699844057788897799999979999976998899697803888889998866774445554457768889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~efk~lV~~~H~~GI~VilDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (390)
T d1ud2a2 81 AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF 160 (390)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998558813898714554676630344420268654332345543445554556776677678776543445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~dg~r~D~~~~~~~~~ 240 (390)
T d1ud2a2 161 NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY 240 (390)
T ss_dssp EEEEEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCHHH
T ss_conf 78876655777751211687655555422222222334410004889999988765301210124653334320067677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
T d1ud2a2 241 TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA 320 (390)
T ss_dssp HHHHHHHHHHHCSSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTTTTCHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 88888887643202103411124786110101245432333203678889999875134469999987533033783326
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 v~fl~nHD~~r~~~~~~~~~~~~~~~~~~~il~~~pG~P~iy~GdE~G~~~~~~~~~~d~i~~l~~~R~~ 390 (390)
T d1ud2a2 321 VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQN 390 (390)
T ss_dssp EECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 8870277665400013675789999999999985799849974265097998985126888999997389
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=29345.71 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (389)
T d1e9yb2 1 GIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQI 80 (389)
T ss_dssp EEEEEEETTCTTHHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999856870774586588877776552797608999998600377253662116779837899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~aGa~GlKiHEDwGatp~~Id~~L~vad~~dvqv~iHtDtlNE~Gfve~T~~a~~gRtiH~~HtEGaGGGHAPDii~~~~ 160 (389)
T d1e9yb2 81 EAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAG 160 (389)
T ss_dssp HTTCSEEEECGGGCCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGG
T ss_pred HHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCC
T ss_conf 72303220231026787888899998775095389438976654303648998679752003137777777617888705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~nvLpsSTnPT~Pyt~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTIaAEdvLhD~GaiSi~sSDsqaMGRvgE 240 (389)
T d1e9yb2 161 EHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGE 240 (389)
T ss_dssp STTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf 77766788999878666628886345241034798980267777630330223367776336854531366644443677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 vi~RtwQtA~kmk~~rG~l~~d~~~~DN~RvkRYiAKYTINPAIahGis~~VGSvE~GK~a~G~A~~~tSvtFVSqaAid 320 (389)
T d1e9yb2 241 VITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVHHGKAKYDANITFVSQAAYD 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBGSTTHHHHHCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
T ss_conf 89999998999998863687667776427777666650568577558211048625366135867665635886688875
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~Gi~~~LGL~K~l~pVkn~R~ItK~DM~~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 389 (389)
T d1e9yb2 321 KGIKEELGLERQVLPVKNCRNVTKKDMQFNNTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF 389 (389)
T ss_dssp TTHHHHTTCCSEEEECCCCSSCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred CCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 787677387752786138887887785115789982689997689889999135765657630110177
|
| >d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Dehydroquinate synthase, DHQS domain: Dehydroquinate synthase, DHQS species: Aspergillus nidulans [TaxId: 162425]
Probab=100.00 E-value=0 Score=29336.75 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ivtD~~v~~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~~gE~~ 80 (389)
T d1sg6a_ 1 PTKISILGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVS 80 (389)
T ss_dssp CEEEEETTEEEEEEETTHHHHTHHHHHHHHSCCSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGG
T ss_pred CCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf 91688769731898888078775999984179981899978965898999999999870742146762489981698452
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Ks~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~rgi~~i~vPTtlla~~Das~g~k~~in~~~~kn~ 160 (389)
T d1sg6a_ 81 KSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNL 160 (389)
T ss_dssp SSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEECSHHHHHTTTSSCEEEEEETTEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEECCCCCCCE
T ss_conf 89999999999999628876777569996563477889999999855876367314021256653232134211366421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~g~~~~P~~V~iD~~~l~tlP~r~~~aG~~e~ik~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I 240 (389)
T d1sg6a_ 161 IGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARI 240 (389)
T ss_dssp EEEECCCSEEEEEGGGGGTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCCCCTTSCTTGGGHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
T ss_conf 21012045552005554341799998634235553212687888899986999987544201201322104699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~s~~~k~~iv~~d~~e~g~r~~ln~GHt~~HAlE~~~~~~~lHGEaVaiGml~~~~ls~~~g~l~~~~~~~i~~~l~~l 320 (389)
T d1sg6a_ 241 LASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAY 320 (389)
T ss_dssp HHHHHHHHHHHHC-----CGGGGGGTTHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99999863202333443263310135466788887632234568889998899999999993799999999999999986
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 gLPt~l~dl~~~~~~~~~~~~~~~l~~~~~~DKK~~~~~i~~vl~~~iG~~~~~~~~~~~~~~i~~~L~ 389 (389)
T d1sg6a_ 321 GLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVVLA 389 (389)
T ss_dssp TCCCSTTCHHHHHHTTTCCCCHHHHHHHHHTCCE-------ECCEEETTEESSSSCEECCHHHHHHHCC
T ss_pred CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHC
T ss_conf 999654344200013434599999999986378857997899967457767663277599899999739
|
| >d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: AAT homologue TM1698 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29335.64 Aligned_cols=1 Identities=100% Similarity=1.068 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~ 80 (389)
T d2gb3a1 1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRR 80 (389)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97456348987788899999999976998888989989999889999999850777778899868999999999998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (389)
T d2gb3a1 81 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERT 160 (389)
T ss_dssp SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTE
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 39876552699625543221222112235798688707987433432113686321232222355420245554215674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~ 240 (389)
T d2gb3a1 161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC 240 (389)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 07984798766443210899999984234499999994131002323322222222223443345565334576563132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l 320 (389)
T d2gb3a1 241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL 320 (389)
T ss_dssp EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEC
T ss_conf 51100268998766420122223222222222322320002232333321002344445430463236999558999958
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 p~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a~~~L~~~lk~f~~ 389 (389)
T d2gb3a1 321 PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 389 (389)
T ss_dssp SSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999986006329789994750146888889989999728999999999999999999619
|
| >d1jiha2 e.8.1.7 (A:1-389) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: Lesion bypass DNA polymerase (Y-family), catalytic domain domain: DNA polymerase eta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29335.48 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~vI~hiDmD~FyAsvE~~~~p~l~~~Pv~V~q~~~via~sYeAR~~GVk~gm~~~eA 80 (389)
T d1jiha2 1 MSKFTWKELIQLGSPSKAYESSLACIAHIDMNAFFAQVEQMRCGLSKEDPVVCVQWNSIIAVSYAARKYGISRMDTIQEA 80 (389)
T ss_dssp CCSSBHHHHHGGGCTTTGGGSTTCCEEEEECTTHHHHHHHHHTTCCTTSCEEEEETTEEEEECHHHHTTTCCTTSCHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHCCCCCCCHHHH
T ss_conf 98413645877279752236877679997365089989967563526997799008869998999997199878929999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~k~CP~li~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~Yr~~S~~v~~il~~~~~~vE~~SIDEaflD 160 (389)
T d1jiha2 81 LKKCSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFKSACDLVERASIDEVFLD 160 (389)
T ss_dssp HHHCTTCEEEECCEEETTCSSEECCTTCSTTCSCTTSCCCSSSEEECCHHHHHHHHHHHHHHHHHCSCEEEEETTEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE
T ss_conf 98697636852121234444333344320001331001465326898899999999999999986888057416637897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 240 (389)
T d1jiha2 161 LGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILAL 240 (389)
T ss_dssp CHHHHHHHHHHCCSCBSSSSCBHHHHTHHHHHHHHHCCSCTTSBCCCCCGGGGGCCCCSEECCTTCCCSCCSHHHHHHHH
T ss_pred CCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 50023220355431000122112332212345433332233234456642111222244433433344444356654028
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~~ia~~IR~~I~~etGlt~S~GIa~NK~LAKlAs~~~KPngqtvl~~~~v~~fl~~~~lpi~ki~GIG~k~~kkL~~~l 320 (389)
T d1jiha2 241 GSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELIDVL 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTTCSSCEEECCGGGHHHHHTSSSCCGGGSGGGSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999869984302455289999988744988558667899999997267872020787889999999984
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 gi~t~~di~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~l~Rg~~~~pv~~r 389 (389)
T d1jiha2 321 DLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSR 389 (389)
T ss_dssp TCCSSSHHHHHHHHSCSCHHHHHHHHHHHHTSTTCCTTTCSSCTTCHHHHHHHHHHHTTTCCCCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 897613399987653688999855000655541068776555753244248888644147638888889
|
| >d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: CV3147-like superfamily: CV3147-like family: CV3147-like domain: Hypothetical protein CV3147 species: Chromobacterium violaceum [TaxId: 536]
Probab=100.00 E-value=0 Score=29330.89 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~Ls~~Dl~~i~~Ga~iLGtGGGGdp~~~~~l~~~~~~~~~~~~~~V~li~~del~D~~~V~v~~mGAPtv~~E~~~~~ 80 (389)
T d2o3ia1 1 AFELSPSDLEPLLQGACFFGSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEATDGDCVMVAYMGAPDAINQVQWPN 80 (389)
T ss_dssp CEEECGGGHHHHHHHHHHTTTTCSCCHHHHHHHHTTCSBTTTBSCSCEEEECGGGCCSSEEEEEEEEECHHHHTTCSSCH
T ss_pred CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCEEEEEEEECCHHHHEECCCC
T ss_conf 93757999999851459997278876688999999986642257996699535336888899997640787883405799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~e~~~a~~~l~~~~g~~~~av~~~EiGG~Ns~~pl~~AA~~glPvVDaD~mGRAfPelqm~t~~i~G~~~~P~~lad~ 160 (389)
T d2o3ia1 81 GPVEAALAARQRLESQGRKLAYVVAPESGALGFVVASLVAAKLGLAVVDADGAGRAVPSLPMLTYAAAGVPPTPAFLAGE 160 (389)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHTCEEESBCSSSSCCSSGGGSHHHHTTCCCCSEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHEECCCCCCCEEEECC
T ss_conf 75799999999999719975799951668722789999999719988747875456774322000105899887699728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Gn~~i~~~~~~~~~~~~~e~~~~~~e~~~R~~~~~~~~Gg~~~~a~~pm~~~~~~~~~~I~gTlS~A~~iGrav~~ar~ 240 (389)
T d2o3ia1 161 SGLCVELGVRMPPPDGQRREDISTVVEQMLRPILTNPQFGQFGGLAMWMMSPAQLGGALPVRGTLSRALKLGRALQDGKV 240 (389)
T ss_dssp SSCEEEEEEECCCCC---CCCHHHHHHHHHHHHTTSTTTCSEEEEEEEEECHHHHHHHCCSBSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99779984023555412577899999998877766875174347862659989983201168559999999899998664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~l~~~~~~~g~~~l~~Gki~~v~r~~~~Gf~~G~v~ieg~~~~~~i~fqNE~L~a~~~g~~~~la~vPDLI~ 320 (389)
T d2o3ia1 241 KTAEAMLDFLRRELDIKGKLLFGPATLASPEVSTAGGFDLGKVVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAIS 320 (389)
T ss_dssp CSHHHHHHHHHHHHCCCCEEEEEEEEECCC----------CEEEEESSSCEEEEEESSSEEEEEETTCSSCSEETTSEEE
T ss_pred CCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEECEEEEEECCCCCEEEECCCEEE
T ss_conf 24327999998732667868999689997799705871789999907985899999814189998798978997796799
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~lD~~tG~pitte~~~~~~~~g~~~~ryG~~V~Vi~~pa~~~wrt~~~l~~~GP~~~~fGy~~~y~P~e 389 (389)
T d2o3ia1 321 YFVEGEGQHVFSNGDLSGNDHGLDPSVRGRKAAVIALPAAAPLSEGLILQSFADELAQLGYLGPYAPVD 389 (389)
T ss_dssp EEECSSSCCCCCHHHHBCSSSSBCTTTTTSEEEEEEECCCGGGSSHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCHHHHHHCCCHHHHCCCCCCCCCCC
T ss_conf 986688864423332345556654234798899999609827486333655095055359997765288
|
| >d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29266.76 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~n~~kplC~i~G~a~~sKDN~IRig~~g~i~V~REPyVSC~p~eC~~FaL~QGa~l~~kHSNgTi~DRsp~RtL~s~ 80 (388)
T d1f8ea_ 1 RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW 80 (388)
T ss_dssp CCCCCCCCEECCCSEEEEEEECCHHHHHTTSCBEEEEEEEEEEETTEEEEEEEEEEEESSSGGGTTTTCSCCTTCEEEEE
T ss_pred CCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEC
T ss_conf 94011376666433146661477168638987899826512028202034762043101786668841566510113441
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~lG~~p~~~ns~f~~vaWSsssCHDGk~Wl~i~vtG~D~nA~A~~~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vv 160 (388)
T d1f8ea_ 81 PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV 160 (388)
T ss_dssp ETTSCCBTTTCEEEEESSEEEEEECSSSEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCCCBTTEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEE
T ss_conf 26899966774589998643444689724899878798883799998999963265444311100322048989988999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 mTDG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg 240 (388)
T d1f8ea_ 161 FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP 240 (388)
T ss_dssp EEEECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEEETTTTEEEEEECCCS
T ss_pred EECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECC
T ss_conf 92688778631589998566388876169886731763422899946999706888888975995455431443278646
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~DTPR~~D~s~g~C~~p~~~~g~~GVKGf~f~~G~~vW~GRTiS~~sRsGfE~~~v~~gwt~~~s~~~~~q~iv~n~n 320 (388)
T d1f8ea_ 241 VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD 320 (388)
T ss_dssp SCCSSSCCCCCSSCCSSSCCCSCCSCCCCCCEECCTTSCEEEECSCSSSSEEEEEEECTTTTTCTTCCCSEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCEEEEECCC
T ss_conf 44789998988866478987778888734314766897687664247667761699934875276603204228996587
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 wSGYSGsF~~~~~~~~C~~pCFyVElIRGrp~E~~v~WTSnSiv~fCG~~~~~g~~swpDGA~i~ff~ 388 (388)
T d1f8ea_ 321 WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL 388 (388)
T ss_dssp ECCCEEEECCTTCSSSEECCEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGGC
T ss_pred CCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 77561771234348873011489999618876563467407779993679986786689865465559
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29264.94 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 gll~la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 1 GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCCTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 96999999998699999999999999868998999999999999869999999999999985999899999999996420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLK 160 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 00222222222121122222222222222222222222222221112222222222222222222110001356788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 240 (388)
T d1w3ba_ 161 AIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 240 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40258610689986363010247199999999999984946499999971552200529999999998577755479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (388)
T d1w3ba_ 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999878999999999999984999899999999999974879999999986540487300101579999998789
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 321 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999999986889899999999999985999999999999997099989999999999998589
|
| >d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Vacuolar ATP synthase subunit C superfamily: Vacuolar ATP synthase subunit C family: Vacuolar ATP synthase subunit C domain: Vacuolar ATP synthase subunit C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29264.00 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~ 80 (388)
T d1u7la_ 1 LYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIE 80 (388)
T ss_dssp CCCCCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGTSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97565069998778788889850468999985225887236304798777135999998788888788899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~R 160 (388)
T d1u7la_ 81 ILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAER 160 (388)
T ss_dssp HHHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHEEEECCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987236110321676878138987564460444288889899999999999998889999999999999999998740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 K~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~ 240 (388)
T d1u7la_ 161 KKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQ 240 (388)
T ss_dssp HTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHH
T ss_pred CCCCCEEECCHHHHCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHCEECCCEEEEEEEEEHHHHH
T ss_conf 04785262427752798872553314058999961531788999986325762687155302568805899999723199
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 eF~~~aRE~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~~wiHiKalRvFVESVLRYGLP~~ 320 (388)
T d1u7la_ 241 EFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPH 320 (388)
T ss_dssp HHHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999997594304266797899999999999999999999999999999999999999998568766433453589834
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 F~~~li~p~~k~~kklr~~L~~~f~~L~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ey~PyV~~~i~l 388 (388)
T d1u7la_ 321 FNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASLVDTEYEPFVMYIINL 388 (388)
T ss_dssp EEEEEEEECTTCHHHHHHHHHHHHGGGGCTTCC------------------------CCSSEEEEEEC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 13899950872589999999998634265300234446667776543212335677515549998349
|
| >d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29262.81 Aligned_cols=1 Identities=0% Similarity=0.203 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 lR~tT~GESHG~aig~vIdG~PaGl~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~v~ilSGv~~G~TtG~PI~~~I~N~D 80 (388)
T d1qxoa_ 1 MRYLTAGESHGPRLTAIIEGIPAGLPLTAEDINEDLRRRQGGYGRGGRMKIENDQVVFTSGVRHGKTTGAPITMDVINKD 80 (388)
T ss_dssp CEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHCSTTCCTHHHHCCCCCEEEESEETTEECSSCEEEEEECGG
T ss_pred CCEEECCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCC
T ss_conf 95541313688834899816186887499999999955798999997668999827994644389806774499998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~PRPGHAD~~~~~Kyg~~d~r~gggRsSaReTa~rVAaGaiAk~~L~~~gI~v~s~ 160 (388)
T d1qxoa_ 81 HQKWLDIMSAEDIEDRLKSKRKITHPRPGHADLVGGIKYRFDDLRNSLERSSARETTMRVAVGAVAKRLLAELDMEIANH 160 (388)
T ss_dssp GGGGTTTTCSSCCCGGGTTTTCCCSCCTTSSHHHHHHHHTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 77754444411123455432012457888435789987478656687751688999999999999999999819735235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~c~d~~~~~~m~~~I~~ar~~gDSlGG~ve~~~~gvP~GLG~pv~~d~kLd 240 (388)
T d1qxoa_ 161 VVVFGGKEIDVPENLTVAEIKQRAAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLD 240 (388)
T ss_dssp EEEETTEECCCCSSCCHHHHHHHHHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEEEEEESCCTTCSCSSSGGGCHH
T ss_pred EEEECCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 68741320267443687888764311556467868855668889999853887676399999717833368866776541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~La~AlmSIpAvKgvEfG~GF~~a~~~GSe~nD~~~~~~~~~~~~~tN~~GGi~GGISnG~pI~~rva~KPtsSI~~~q 320 (388)
T d1qxoa_ 241 ARLAQAVVSINAFKGVEFGLGFEAGYRKGSQVMDEILWSKEDGYTRRTNNLGGFEGGMTNGQPIVVRGVMKPIPTLYKPL 320 (388)
T ss_dssp HHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTSCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCE
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 89998774243113453056488897421455650100466784113688762016777788769999957865567755
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~Tvd~~~~e~~~~~~gRhDpCivpRAvpV~EAm~alvLad~~L~k~g~d~l~~~~~~~~~y~~~~~~~ 388 (388)
T d1qxoa_ 321 MSVDIETHEPYKATVERSDPTALPAAGMVMEAVVATVLAQEILEKFSSDNLEELKEAVAKHRDYTKNY 388 (388)
T ss_dssp EEECTTTCCEEEECCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHSCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 53566898067246898897075532899999999999999999857775999999999999998519
|
| >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
Probab=100.00 E-value=0 Score=29261.25 Aligned_cols=1 Identities=100% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~k~~~~~LtfDDVlLvP~~st~~~~~vdl~~~~t~~~~l~iPIisA~MDtVt~~~mAi~ma~~GGlgVihr~~~ie~q~~ 80 (388)
T d1eepa_ 1 NKITKEALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRK 80 (388)
T ss_dssp CCSCCCCCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 96333578841079827988777778354489538776699877169888788999999998798899908999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~~Vk~~~~~~~~~~~~d~~~~~~~~~t~~~~~~~~~a~~d~~~~~~~p~~~~d~~~~l~vgaAvg~~~~~~~ra~~L~ 160 (388)
T d1eepa_ 81 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELV 160 (388)
T ss_dssp HHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
T ss_conf 99986230044520036763310223300554422547877188876506777655224101220589789999999877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~aG~D~ivID~AhG~s~~~~~~i~~ik~~~~~v~vIaGNV~T~e~a~~L~~~GaD~VkVGiGpGs~CtTr~~~GvG~pq~ 240 (388)
T d1eepa_ 161 KAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQI 240 (388)
T ss_dssp HTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHH
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 51254543103663167799999999987899866500126799999998629775543122232345654236674238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAla~GAd~VMlG~~lAg~~Espg~~~~~~g~~~k~~~gm~S~~a~~~g~ 320 (388)
T d1eepa_ 241 TAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGS 320 (388)
T ss_dssp HHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------------
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHCCC
T ss_conf 89999999861577157853666737730136785155034053654136788418985892740155665487775445
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~~~~l~gglrs~m~y~Ga~~l~e~~~~~~fv~vt~~ 388 (388)
T d1eepa_ 321 KSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISHS 388 (388)
T ss_dssp ----------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCC
T ss_conf 21013334664422346704987078887899999999999997421586629998539889997899
|
| >d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 3-hydroxykynurenine transaminase species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]
Probab=100.00 E-value=0 Score=29260.48 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~PGP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a 80 (388)
T d2ch1a1 1 KFTPPPASLRNPLIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAG 80 (388)
T ss_dssp CCCCCCGGGSSCCCCCCCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHH
T ss_pred CCCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
T ss_conf 98999634437668885540108998889999997476778878899999999999999999689997199976848999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ea~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~ 160 (388)
T d2ch1a1 81 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP 160 (388)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf 99999974211133333222310000033443311332123565445521012344430478633565302222322211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2ch1a1 161 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLL 240 (388)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH
T ss_pred HHHHCCHHCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 12200000146540366532102346621230576399982655457887289972427788754202575531025603
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~ 320 (388)
T d2ch1a1 241 LLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIM 320 (388)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEE
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEE
T ss_conf 55543023320025576532778999999999998766677898887777877766553022323689788098489998
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~p~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~~~~~~ 388 (388)
T d2ch1a1 321 IPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYIF 388 (388)
T ss_dssp CCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999998513998996788655698899717717899999999999999999961986589
|
| >d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: phi29 DNA polymerase species: Bacteriophage phi-29 [TaxId: 10756]
Probab=100.00 E-value=0 Score=29258.61 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~t~~s~~~~~fk~~~~~~~~~~~~p~~~~~~~~~ir~~y~GG~~~~~~~~~~~~~~~i~~yD~nSLYPs~M~~~~~p~g~ 80 (388)
T d2py5a2 1 MTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGE 80 (388)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHHSCCCCHHHHHHHHTTCCCCCEEECGGGBTCEECSEEEEEETTHHHHHHHHSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCC
T ss_conf 96307899999999765146540888991477888971217623214544555668548986557239998337899776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d2py5a2 81 PIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEY 160 (388)
T ss_dssp EEEEESSCCCCTTSCEEEEEEEEEEEECTTCCCCCCC-------CCSCCSBCTTSCEEEEEEHHHHHHHHHHEEEEEEEE
T ss_pred CEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEE
T ss_conf 04653614666666770489999822765557766530344677865784668850567873899999995587258888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~f~~~~~~~k~~~~~~~~~kk~~~~~~q~~~KLl~NSlYGk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2py5a2 161 ISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYT 240 (388)
T ss_dssp EEEEEEEEESCTTHHHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHTCCSBCCBEEEEECTTSSEEEEECCCCBCCCCCH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHEECCCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCH
T ss_conf 76677212357899999842588774017799999974542441013335655434641443200121210001464431
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~ia~~ita~~r~~~~~~~~~~~~~v~Y~DTDSi~~~~~~~~~~~~~~~~~~~lg~~~~E~~~~~~~~~~~K~Y~~~~~~~ 320 (388)
T d2py5a2 241 PMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMK 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEETTEEEEESSSCCGGGGGGBCSSSTTSEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCHHHCCCCCHHHCEEECC
T ss_conf 48899998888889987641488379983636886577621567764245650546301010112116643201457424
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~v~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~~~~ 388 (388)
T d2py5a2 321 EVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK 388 (388)
T ss_dssp EETTEEEECBTTBCSEEEEEEEETTCCHHHHTTCCTTTCSTTCEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHCHHHHEEECCEEEEECCCCCEECCCEEECC
T ss_conf 54332233442340152456455231699999987750502411656351177069826524402239
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=0 Score=29258.64 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~t~~nw~~~~~~r~~f~~~~~~~pt~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~t~a 80 (388)
T d2dcfa1 1 STGQHPARYPGAAAGEPTLDSWQEPPHNRWAFAHLGEMVPSAAVSRRPVNAPGHALARLGAIAAQLPDLEQRLEQTYTDA 80 (388)
T ss_dssp CCCCCCCSSTTCCTTCSCTTTTTSTTHHHHHTTCGGGTSCCCCCCSCC----CCCEEECTTHHHHCTTHHHHHHHTTEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
T ss_conf 99888455889523677847864886301205558774884342079888775333212444455433999987428847
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~lV~~~G~iv~E~y~~~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe~~~~~~~~iTi~~LL~mtsGl 160 (388)
T d2dcfa1 81 FLVLRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISI 160 (388)
T ss_dssp EEEEETTEEEEEEECTTCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGGGTTSTTSSCBHHHHHTTCBCC
T ss_pred EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 99998998999974699884320148999889999999999734854456752302454404543215677764233677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pg~~f~Y~~~~~~lLg~iie~~tG~~~~~~~~e~i~ 240 (388)
T d2dcfa1 161 DYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWIVERVTGLRYVEALSTYLW 240 (388)
T ss_dssp SCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCCSCBSSCCCCHHHHHHHHHHHHHHHCSCHHHHHHHHTG
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 64234355651355666653101001246188999874067679998789806789999999987517630222333204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~PlGm~~~~~~~~~~~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 320 (388)
T d2dcfa1 241 AKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDGGVAPGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDG 320 (388)
T ss_dssp GGTTCSSCCEECBCTTCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 84212222222334567632100323132214577788874885488605649999998568972001245656678999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~Yg~~ww~~~~~~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~av 388 (388)
T d2dcfa1 321 SYTRQWWCTGNERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALDAV 388 (388)
T ss_dssp EEETTEEECCCTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97864551699997089887789689999069989999599999985468999999999999997229
|
| >d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA polymerases {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29258.40 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~g~~ltr~~~d~~~g~~i~~~~~t~~G~~~v~v~~q~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~V~~v 80 (388)
T d1q8ia1 1 AQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGL 80 (388)
T ss_dssp CEEEEEEEEEEECCTTCBEEEEEEEETTEEEEEECSCBCEEEEEEGGGHHHHHHHTTTCCSEEEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCEECCEEEECCCCCEEEEE
T ss_conf 98623630024771897799999985998879998799679999854567999998547781664322055789779999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 y~~~~~~~r~l~~~l~~~g~~vyEaDI~~~~RfliD~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~P~lkilsfDIE~~~ 160 (388)
T d1q8ia1 81 YCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTR 160 (388)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCBSTTCCHHHHHHHHTTCSSEEEEEEEEETTEEEEEEEEECTTCCCCCCEEEEEEEECT
T ss_pred EECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCCCCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEEEEEECC
T ss_conf 92899999999998862698589768996884899787888858998624661541067566788997359999999747
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~si~l~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~E~~LL~~F~~~i~~~dPDii~GyNi~~FDlpyL~~Ra~~~~ 240 (388)
T d1q8ia1 161 HGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 240 (388)
T ss_dssp TSCEEEEEEEETTEEEEEEESSCCSCCTTCSSEEEEESSHHHHHHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 88667898548998889999567777787855999969999999999999987199889960788878899999999858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~~~lgr~~~~~~~~~~~~~~~~~~~~i~Gr~~lD~~~~~k~~~~~~~sy~L~~Va~~~Lg~~K~~~~~~~~~~~~~~~~ 320 (388)
T d1q8ia1 241 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRF 320 (388)
T ss_dssp CCCCCSSSSCCCEEEEECSSSCEEEEEBTTBEEEEHHHHHHHSCCCCSCCCHHHHHHTTC------------CTHHHHHH
T ss_pred CCCHHHHCCCCCEEEECCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 87404424772205875655651133020499860268897563043546776755410024455557255589987157
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~d~~~l~~Y~~~D~~Lv~~L~~k~~~i~~~~ela~l~g~pl~~~g~s~~~~~~lll~~~~r~g~v~P 388 (388)
T d1q8ia1 321 AEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAP 388 (388)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCSCTTTTCCHHHHHHHHHHHHHHHTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCEECC
T ss_conf 12489999998999999999999877899999999884979899788499999999999997799587
|
| >d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29259.82 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~pGP~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT 80 (388)
T d1h0ca_ 1 HKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGH 80 (388)
T ss_dssp CCCSSCCCGGGGSCCCCCCCEECSSSCCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHH
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 98767997676555688767212499988999999975768888789899999999999999996899983899869489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i 160 (388)
T d1h0ca_ 81 CALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVL 160 (388)
T ss_dssp HHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
T ss_conf 99999999861268740231134301000012211111133333587655216899987616971137874200014445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d1h0ca_ 161 QPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLD 240 (388)
T ss_dssp CCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTC
T ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
T ss_conf 67999988764025441001112344332112345651220333321468972677750078887544304666432212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~ 320 (388)
T d1h0ca_ 241 IKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTT 320 (388)
T ss_dssp HHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEE
T ss_pred CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEE
T ss_conf 00023443210233443556657999988878999997166531000121047778777633753126887773880899
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~~ 388 (388)
T d1h0ca_ 321 VAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKK 388 (388)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC-
T ss_pred EECCCCCCHHHHHHHHHHCCCEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98899989999999998519989957852204998998477777999999999999999999862569
|
| >d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=29255.56 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 80 (388)
T d1gdea_ 1 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNG 80 (388)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 95156410894689999999858998199999889998789999999999855764789985779999999999875133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (388)
T d1gdea_ 81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT 160 (388)
T ss_dssp CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE
T ss_pred CCCCCHHEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC
T ss_conf 56787020431367535889999986589798998899848899999985998999514556687879999997375687
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 240 (388)
T d1gdea_ 161 RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR 240 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHCCCCCCC
T ss_conf 59998999698888689999999999999869999997088655333677777656057788089995772433376361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl 320 (388)
T d1gdea_ 241 LGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYI 320 (388)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEE
T ss_pred EEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 78997302102343211232223333220045789986032036899999999875334566653212566589833799
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l~e~k~~ 388 (388)
T d1gdea_ 321 FPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERKLV 388 (388)
T ss_dssp CCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99888879999999999998599999810451989999799996499999999999999999961799
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29254.50 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~~~RA~eL~~~I~~~~~d~G~~ 80 (388)
T d1ku0a_ 1 ASPRANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRACEAYAQLVGGTVDYGAA 80 (388)
T ss_dssp CCCCCCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98877999889818866677544676214678536468999858978998516986678999999999986345453376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTT 160 (388)
T d1ku0a_ 81 HAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTT 160 (388)
T ss_dssp HHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 77652302237567220003366786358604554587999999702356432222212344333223567750688885
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 IsTPH~GS~~AD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~~es~~~~~~~~~~s~~~~~~~~a 240 (388)
T d1ku0a_ 161 IATPHDGTTLVNMVDFTDRFFDLQKAVLEAAAVASNAPYTSEIYDFKLDQWGLRREPGESFDHYFERLKRSPVWTSTDTA 240 (388)
T ss_dssp ESCCTTCCGGGGSTTHHHHHHHHHHHHHHHHHHHTTSCGGGCCCCCCBGGGTBCCCTTCCHHHHHHHHHTSHHHHSSSBH
T ss_pred CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
T ss_conf 05788986366542346652147889998876403542110002466653343457651099999988538876666401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~dLtt~g~~~fN~~~~~~p~v~Y~S~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NDGlV 320 (388)
T d1ku0a_ 241 RYDLSVPGAETLNRWVKASPNTYYLSFSTERTYRGALTGNYYPELGMNAFSAIVCAPFLGSYRNAALGIDSHWLGNDGIV 320 (388)
T ss_dssp HHHHSHHHHHHHHHHCCCCTTSEEEEEEECCEEECTTTCCEEECTTSCHHHHHHTHHHHTTCCBGGGTBCGGGCCBSSSS
T ss_pred HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03106599999733357899846777785143345777632224444454334557545553346532137679988865
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~v~S~~~g~~~~~~~~~~~~~~i~~G~W~~~~~~~~DHld~iG~~~~~~~~~~~~Y~~~a~~L~~l~~ 388 (388)
T d1ku0a_ 321 NTISMNGPKRGSNDRIVPYDGTLKKGVWNDMGTYNVDHLEVIGVDPNPSFNIRAFYLRLAEQLASLRP 388 (388)
T ss_dssp BGGGSSSCCTTCCCCEEECCSSCCBTSEEEEEEESCCTTGGGTSSCCTTSCHHHHHHHHHHHHHTCCC
T ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88557587056777543345654455011036547649997388987877999999999999843999
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29253.85 Aligned_cols=1 Identities=0% Similarity=-1.323 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~p~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg 80 (388)
T d1erja_ 1 HYLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80 (388)
T ss_dssp CCCCCTTSSSCTTCCCCHHHHCCCSSSSCTTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEE
T ss_pred CCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 95687113244147999705765843475322468897089868877762054107607999968999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~ 160 (388)
T d1erja_ 81 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 160 (388)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 49948999813640576631665443244321110146778988999988999801213444111121111111111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 240 (388)
T d1erja_ 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240 (388)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
T ss_conf 11111111011111111112221015654101111110000124544211236887875899738981999634557300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 320 (388)
T d1erja_ 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320 (388)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCC
T ss_conf 01024433345778987899997999999999789928987515776432101344420011012455327899988999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k~ 388 (388)
T d1erja_ 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388 (388)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEC
T ss_conf 99999969897999999999699999688997899998467425899999999918997999762149
|
| >d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Phormidium lapideum [TaxId: 32060]
Probab=100.00 E-value=0 Score=29253.48 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 80 (388)
T d1j32a_ 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKL 80 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94523745399589999999999998779986899997899999899999999998558877899988999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~ 160 (388)
T d1j32a_ 81 QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 87316577885599868789999999999819989899928981879999998568599983153336678999999727
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 240 (388)
T d1j32a_ 161 TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA 240 (388)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTT
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 77874999889999877403535554432011237867972056531034677887888948522156057037705413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~g 320 (388)
T d1j32a_ 241 MTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDG 320 (388)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCB
T ss_pred CCHHHEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 60657599998899999998766521245668999887632445099999999999999999999998479978668993
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 g~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~~~l~~l~ 388 (388)
T d1j32a_ 321 AFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGIL 388 (388)
T ss_dssp TTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 68999988887999999999999869999981643599996999983899999999999999999859
|
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=0 Score=29258.53 Aligned_cols=1 Identities=100% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~ 80 (388)
T d1x38a1 1 DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA 80 (388)
T ss_dssp CCCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99876889999999999999877999999613064445688788985256616636876667898999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~ 160 (388)
T d1x38a1 81 CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY 160 (388)
T ss_dssp HHTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGG
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87436898836633655675235664210033311025897999999998657887448763367763534564446556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 et~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~ 240 (388)
T d1x38a1 161 ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240 (388)
T ss_dssp GSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 67667889999988653664110135430122223455674213314436886646740334530488899886145577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~ 320 (388)
T d1x38a1 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK 320 (388)
T ss_dssp HHHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC
T ss_conf 77605651223422357756657999999998730599752424221023312356775789999998517881347853
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------------~ 633 (1024)
|
T Consensus 321 ~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S 388 (388)
T d1x38a1 321 YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS 388 (388)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 89999999999985998999999999999999999489988877824544069999999999999639
|
| >d1zeea1 a.266.1.2 (A:6-392) Hypothetical protein SO4414 {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Hypothetical protein SO4414 species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=29191.62 Aligned_cols=1 Identities=0% Similarity=-0.295 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~d~wir~~f~~~n~~le~~y~~~~~~~~~~~~g~~~k~~l~~~g~~~i~~ll~egntdegf~~~f~llgnvg~ym 80 (387)
T d1zeea1 1 YNTEAFDEWIRSRFVELNSQLEQLYYQQTDRANVQEVGTELKHTLESEGRELVKALLDEGNTDEGFDSAFDLLGNVGLYM 80 (387)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHHHHHSSSSSCCSSSCHHHHHHHHHHHHHHHHTTTTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96678889999999998799999997477732342000899999999889999999966785231799999975158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~acrrh~i~ep~re~~~p~~eas~la~~~~as~gv~prf~~~hl~~hn~a~~~~~k~ft~l~de~~f~~~nt~~~~a~~~ 160 (387)
T d1zeea1 81 AACRRHEITEPTRETTSPLLEASALAMHIGASIGVTPRFATAHLTTHNRAHNGIYKRFTDLPDEKLFVDYNTKGILAYKR 160 (387)
T ss_dssp HHHHHTTSSCTTTCSSCSCHHHHHHHHHHHHHHTSCSSCCHHHHTTTCCEETTEECCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99874267785301368414437999988886399923566666315665410676305883578999875799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~l~~~~~lgi~hp~~~~ll~~~~~aLq~v~~sn~~l~~~ld~~~Ff~~vRPyykP~rVG~q~YrG~sAgqsa~I~vl 240 (387)
T d1zeea1 161 ASDALLKIQPLGISHPISHDLLRVTKQALQDVIESNQQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFAGINVI 240 (387)
T ss_dssp HHHHHHTTTTTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHTGGGGCCEEETTEEECCCCTTCSHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCHHHCCCHHHH
T ss_conf 99998764287899754899999999999999999999998439999899856312543237751079971201008999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 D~LLGvcha~dP~ysqfL~dmr~YMPP~hra~L~d~~r~PSl~d~vLsa~~~~~~~~y~~nL~aflevC~~hg~afR~hH 320 (387)
T d1zeea1 241 DLTLGLCFANEASYSQMLVDKFLYMMPEDQQILRECMRRPNLMDDFLQAKGCIHQDWYQENLKLFIEVCELHGQTAIQHH 320 (387)
T ss_dssp HHHTTSSCTTSHHHHHHHHTTGGGSCHHHHHHHHHHTTSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975563799409999999986179789999999863871689998635650038999999999999999999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 lQlV~KYI~~pS~~~~~q~~~~lTaSGPpl~vLLk~LkKLRD~R~AA~r~Di~tr~~d~~~l~~~l~ 387 (387)
T d1zeea1 321 NELVTKYIAEPSVSMEQQHLAKVTASGPPLHVLLASLERLRDRRAAVLRDDIRTRYYDLKKLKDSLR 387 (387)
T ss_dssp HHHTSCC------------------------CCHHHHHHHHHHHTTCCCSSSCCTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999972887434266566447899807899999998665542031137763999999998609
|
| >d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29189.81 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 e~~n~t~plC~i~gfa~~sKDN~iR~g~~g~i~V~REPyVSC~p~eCr~FaL~QGa~l~~kHsNGTi~DRsp~R~L~s~~ 80 (387)
T d2aepa1 1 EYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNE 80 (387)
T ss_dssp CCCCCCSCBCCCSEEEEEEECCHHHHHTTSCCEEEEEEEEEECSSCEEEEEEEEEEESSSGGGTTCCCSCCTTCEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEECC
T ss_conf 95546676675343046763662575378866998266020284401357631321027866688426654101035513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lG~P~~~~s~~~~vaWSsssCHDGk~wl~I~vtG~D~nA~A~i~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vvmT 160 (387)
T d2aepa1 81 LGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKILRTQESECVCINGTCTVVMT 160 (387)
T ss_dssp TTCCCCTTCEEEEECSEEEEEECSSCEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCEEETTEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEEEE
T ss_conf 67997558657899863243468862489987768888089999899985326544430120042204898998899992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 DG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg~~ 240 (387)
T d2aepa1 161 DGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLV 240 (387)
T ss_dssp EECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEECTTTCCEEEEECCCSSC
T ss_pred CCCCCCCCEEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCHHCEEEEEEEECCCC
T ss_conf 68878853068999845638877606888673276330379982699970688877897499540022045305753644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~DTpRp~D~s~~g~C~~p~~~~G~~GVKGf~F~~Gn~vW~GRTiS~~sRsGfE~~~v~~gwt~~~Sk~~~~~q~iV~n~n 320 (387)
T d2aepa1 241 GDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVDRGN 320 (387)
T ss_dssp CCSSCCCTTTCCCCSSSCCCSSCSSCCCCCEEEETTEEEEEECSSSSSSEEEEEEEETTTTTSTTCCCEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf 78999888776655658888888886163368658973876532376677616999458875878634111479995588
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 wSGYSGsF~~~~k~C~~pCF~VElIRGrp~E~~v~WTS~S~v~fCG~~~~~~~~swpDGA~i~~mp~ 387 (387)
T d2aepa1 321 RSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI 387 (387)
T ss_dssp ECCCEEEEEEECSSSEEEEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGSCC
T ss_pred CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7752257996899842002899996078764505785187799936789867866899766676669
|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpB, AAA+ modules species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29188.25 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~l~~~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~ 80 (387)
T d1qvra2 1 TYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 80 (387)
T ss_dssp CCSHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCE
T ss_conf 93779999798899998599998748089999999998248899976879999889999999999998089997886966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~ 160 (387)
T d1qvra2 81 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTL 160 (387)
T ss_dssp EEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECH
T ss_pred EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCH
T ss_conf 89955766652667413689999999998505899669872408888427778774138999999973788516663689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a 240 (387)
T d1qvra2 161 DEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA 240 (387)
T ss_dssp HHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99987633679998246112799867889999999999987404774669999999985023666566704688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~a~~~i~~~s~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~ 320 (387)
T d1qvra2 241 AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH 320 (387)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998641589588999999999999999998740145788887653323567999999999999888879999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~Le~lr~~le~A~r~gd~e~AaeL~y~~ip~le~el~~l~~~~~~~~lvr~~VteedIA~VVSrWTG 387 (387)
T d1qvra2 321 RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTG 387 (387)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHTTHHHHHHHHHHHHHHHSSSCSSCCSEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999999999764688788875250799999999999873579877686398999999976109
|
| >d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Myotubularin-like phosphatases domain: Myotubularin-related protein 2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29184.68 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~edGW~~yd~~~E~~RlGl~~~~WRiS~iN~~Y~lC~SYP~~lVVP~~isD~~l~~~a~fr~~~R~Pvl~w~~~~~~ 80 (387)
T d1zsqa2 1 EVFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQ 80 (387)
T ss_dssp CCCSSCGGGSCCHHHHHHHTTCSCSSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTC
T ss_pred CCCCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 98788763235889999863899888788542699704588998169828589999999987636997607988759998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~L~RssqP~~g~~~~r~~ede~~l~~i~~~~~~~~~~~I~D~Rp~~na~an~~~ggG~E~~~~Y~~~~~~f~~i~nih~ 160 (387)
T d1zsqa2 81 ATITRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHV 160 (387)
T ss_dssp CEEEEECCBCCTTTTCCCHHHHHHHHHHHHHSSSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHH
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCHHH
T ss_conf 36885178577756787689999999999737776753555477414688752248986552105675245304665278
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 vr~s~~kl~~~~~~~~~~~~~~s~le~s~WL~~i~~~L~~A~~ia~~l~~~~~sVlVh~sdGwD~T~qvsSL~ql~lDpy 240 (387)
T d1zsqa2 161 MRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGY 240 (387)
T ss_dssp HHHHHHHHHHHHSSCCCGGGHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999998558875466775243444499999999999999999970897399857888752489999999973832
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 yRTi~GF~~LIekewi~~Gh~F~~R~~h~~~~~~~~e~sPvFl~FLDcV~ql~~q~P~~FEF~e~~L~~l~~h~~s~~fg 320 (387)
T d1zsqa2 241 YRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFG 320 (387)
T ss_dssp GGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 11188899999988873378632342678777566777985699999999998749740112799999999986026646
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 tFl~n~e~eR~~~~~~~~t~Slw~~~~~~~~~f~N~~Y~~~~~~~l~P~~~~~~~~~W~~~ylR~~p 387 (387)
T d1zsqa2 321 TFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNP 387 (387)
T ss_dssp TTCSSSHHHHHHTTHHHHSCCHHHHHHTCGGGGBCTTTTSCSSSCCCCCCSTTTCCCCHHHHTCSCC
T ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEHHHHCCCCCC
T ss_conf 4555899999871768787369999987599855978788999857033675667426753335587
|
| >d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Acetylornithine/acetyl-lysine aminotransferase ArgD species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29182.83 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~y~~~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~ 80 (387)
T d1vefa1 1 WRALLEAEKTLDSGVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPM 80 (387)
T ss_dssp CHHHHHHHHHHBCSCSCCCSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 96688606531489878898318984749999798799998464187665528969999999999976364666557705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~ 160 (387)
T d1vefa1 81 RGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVE 160 (387)
T ss_dssp HHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEE
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999876530232101111246726799999999876113312325656889996123863478655678878899826
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~p~~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PD 240 (387)
T d1vefa1 161 FIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD 240 (387)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred EECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86889799999756897479999787788888649989999999999976926984002224674677765446783776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~ 320 (387)
T d1vefa1 241 ILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPK 320 (387)
T ss_dssp EEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTT
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 33313257887666332221023102236883553799863001011200010333222057665078999998617984
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aLS 387 (387)
T d1vefa1 321 IREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 387 (387)
T ss_dssp EEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 5788521469999982774699999999789759933899899979713999999999999999859
|
| >d1bxba_ c.1.15.3 (A:) D-xylose isomerase {Thermus aquaticus, subsp. Thermophilus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Thermus aquaticus, subsp. Thermophilus [TaxId: 271]
Probab=100.00 E-value=0 Score=29181.67 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~p~~~~~f~~~~W~~~~~g~dpfg~~~~~~~~~~~~~~~~~~lg~~~~~fHd~d~~p~~~~~~e~~~~~~~~k~~~~~ 80 (387)
T d1bxba_ 1 MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDE 80 (387)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998766147997235787889988543112788999999984499878516665588899878999999999998641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Gl~~~~~t~nlf~~~~~~~Gs~t~pD~~vR~~Ai~~~k~~id~a~~LGa~~~vlW~G~dG~~~~~~~d~~~~~~~~~e~ 160 (387)
T d1bxba_ 81 TGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREA 160 (387)
T ss_dssp HTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHH
T ss_pred CCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68721122454355623324764689889999999999999999998499979975787766776306799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~v~~~a~~~g~~~~i~iEpkP~EP~~~~~~~~~~~~l~~~~~~g~~~~~gl~lD~~H~~l~g~~~~~~v~~a~~~gkL 240 (387)
T d1bxba_ 161 LNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNFVHAVAQALDAGKL 240 (387)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCHHHHCCCCHHHHHHHHHHHCCE
T ss_conf 99999977750788379995168988544214889999999998377020754123044530487668899999983964
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~vh~Nd~~~~~~D~DL~~g~~~~~~~~~~~~~L~~~gy~G~~~fD~~~~r~~~~~~l~~~~~~~m~~~a~ll~~a~~l~ 320 (387)
T d1bxba_ 241 FHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFR 320 (387)
T ss_dssp CCEECCBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHTTCCSCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15574777777887666888621889999999998458876433134567788500689999999999999999999988
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~d~~~~~~l~ary~~~~a~~~~~~~~~~~~~~~l~~~~~~~~a~~~~s~~qE~Le~l~n~~i~g~~~ 387 (387)
T d1bxba_ 321 EDPEVKELLAAYYQEDPAALALLGPYSREKAEALKRAELPLEAKRRRGYALERLDQLAVEYLLGVRG 387 (387)
T ss_dssp TCHHHHHHHHHHTCCCHHHHTTSSSCCSHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHTTCCC
T ss_pred HCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 6768999999987212442201100145679984476678431432672499999999999862369
|
| >d2ex0a1 c.87.1.9 (A:26-412) Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteurella multocida [TaxId: 747]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Sialyltransferase-like domain: Alpha-2,3/2,6-sialyltransferase/sialidase species: Pasteurella multocida [TaxId: 747]
Probab=100.00 E-value=0 Score=29185.52 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ktlEvYvD~AsLPslqqlm~iiq~ne~~~n~rli~w~R~~i~d~~l~~~~n~~F~~~~~n~~~~~~~~il~~~~~~~~in 80 (387)
T d2ex0a1 1 KTITLYLDPASLPALNQLMDFTQNNEDKTHPRIFGLSRFKIPDNIITQYQNIHFVELKDNRPTEALFTILDQYPGNIELN 80 (387)
T ss_dssp EEEEEEEESSSHHHHHHHHHHHHTTTCSSSCEEEEETTCCCCHHHHTTCSSEEECCEETTEECTHHHHHHTTCCSCEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 95699954355615999999986046778821577742368778987301021354457895299999997174433799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~~Nt~hS~d~~~~I~~~~~~~~~kv~i~~L~lYDDGSaEYV~l~~~k~~d~~~~~~~~~~~l~~~l~~Gt~~~~n~~~~ 160 (387)
T d2ex0a1 81 IHLNIAHSVQLIRPILAYRFKHLDRVSIQQLNLYDDGSMEYVDLEKEENKDISAEIKQAEKQLSHYLLTGKIKFDNPTIA 160 (387)
T ss_dssp EEEESTTHHHHHHHHHHHHHHTTTTEEEEEEEEECCSHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHCCCCCSCHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 82121767776899999998740573048887752885888667764133034445678899988876387778985101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Y~w~qlypt~YH~Lr~Dyf~~~~~L~~Lk~yL~~n~kqM~Wd~f~~fn~~Qk~lf~~~vgf~~E~~qq~~~q~~nFiFt 240 (387)
T d2ex0a1 161 RYVWQSAFPVKYHFLSTDYFEKAEFLQPLKEYLAENYQKMDWTAYQQLTPEQQAFYLTLVGFNDEVKQSLEVQQAKFIFT 240 (387)
T ss_dssp TTCGGGTSCEEEEESCHHHHHHCGGGHHHHHHHGGGEEECCSCHHHHSCHHHHHHHHHHHTCCHHHHHHTCCSSEEEEEE
T ss_pred EEEHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
T ss_conf 33044406743431105565057452479999840333467523200698888899987179899999997267875997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 GTts~~~~~e~~eyyaqqQInvin~a~ne~s~~~~g~~ydLfFKGHP~~~~~N~~I~~~~~~mi~IpakIpFEvLmMTg~ 320 (387)
T d2ex0a1 241 GTTTWEGNTDVREYYAQQQLNLLNHFTQAEGDLFIGDHYKIYFKGHPRGGEINDYILNNAKNITNIPANISFEVLMMTGL 320 (387)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHHHHHSTTSTTCCCTTEEEEEECCTTCTHHHHHHHHHSSSCEECCTTSCHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHCCC
T ss_conf 13455676306778899989998732388996530675115772699865056899743355522644586299987278
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 LPd~VGG~aSSlyFsiP~e~in~ivFtss~~~~s~~d~~~~~lvqVM~~L~iv~~~~V~fw~~~k~~ 387 (387)
T d2ex0a1 321 LPDKVGGVASSLYFSLPKEKISHIIFTSNKQVKSKEDALNNPYVKVMRRLGIIDESQVIFWDSLKQL 387 (387)
T ss_dssp CCSEEEEECCGGGGGSCGGGEEEEEECCCSSCSSHHHHHTSHHHHHHHHTTSCCGGGEEEGGGSCCC
T ss_pred CCHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHCCCCHHHEEEHHHHHCC
T ss_conf 8054336000258975533124899933764256565653839999999777766763676753039
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=100.00 E-value=0 Score=29179.19 Aligned_cols=1 Identities=0% Similarity=0.071 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~p~~g~W~~~~~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~ 80 (387)
T d1k3ia3 1 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPG 80 (387)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEE
T ss_conf 98788978716786889861017899925999999984057666788776068999988889686667789874452568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~ 160 (387)
T d1k3ia3 81 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 160 (387)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEE
T ss_conf 99946886898636888621675675574421565664210130355317826652136633354320566348889551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (387)
T d1k3ia3 161 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 240 (387)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 15887644311346651365042269997079877874686774781486667173166556676657632226378861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 241 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
T ss_conf 35882478875367887752100000111113567884060366566543433566058749998884567668899470
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~Ppyl~~~~ 387 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSN 387 (387)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBCTT
T ss_pred CEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHCCCCC
T ss_conf 1079897999918878899975531279999889999999698767888661148998260405898
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29178.87 Aligned_cols=1 Identities=0% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~l~~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c~~~~~~f~~~~SsT~~~~~~~~~i~Y~~g~~~G 80 (387)
T d2qp8a1 1 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 80 (387)
T ss_dssp CTTTTTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred CCCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEE
T ss_conf 92133025589999899999988999799999989961048926898767881583028871757981899968960999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~D~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~~~~~~~fs~~l~~~~ 160 (387)
T d2qp8a1 81 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAG 160 (387)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCS
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 99999999847773367478999982477621134556622334564435788778537888626574215767632455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~ 240 (387)
T d2qp8a1 161 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 240 (387)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCEECCCCCCCCCCCCEEEECCCCEEECCH
T ss_conf 44456644457784467456233334573586314543336899879999999656654567764169816997086889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~fp~~~~~~~~~~~~~~~~~~i~p~~y~~~~~~~~~~~~~ 320 (387)
T d2qp8a1 241 KVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDD 320 (387)
T ss_dssp HHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHEEECCCCCCCCCE
T ss_conf 99999999856001465567754453156410038986421340578866621233079998879911551356786766
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 c~~~~~~~~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (387)
T d2qp8a1 321 CYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYN 387 (387)
T ss_dssp EEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEEEECCCGGGGSCC
T ss_pred EEEEEECCCCCCEEEHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 8998707999977970894286899998999999999778687788131256798888984652789
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=100.00 E-value=0 Score=29180.81 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~f~~g~d~s~~~~~e~~g~~~~~~~g~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~ 80 (387)
T d1ur4a_ 1 GLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEK 80 (387)
T ss_dssp CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHH
T ss_pred CCCCCCCCCCCHHCEEEEECHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 95223578998100777861068999867977889999710599999983998799404447743335767776242999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~ 160 (387)
T d1ur4a_ 81 AIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 160 (387)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCB
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 99999999987997999867787776877777850321322047999999999999998863699812799724888674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~~~~~~~~~l~~ 240 (387)
T d1ur4a_ 161 AGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTS 240 (387)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf 67688999999999999998730887527872267653277889999998659876400202312347608999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWep~w~~~~~~ 320 (387)
T d1ur4a_ 241 VADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPA 320 (387)
T ss_dssp HHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSSCG
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99983996389985044347786444765787633356777899999999999999985478805999735763136777
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~w~n~aLFd~~g~~l~~l~~f~~~~~~~~~ 387 (387)
T d1ur4a_ 321 HRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGTPF 387 (387)
T ss_dssp GGHHHHHHHHHHHCCSSBCGGGTTTCTTTHHHHCBSCSCGGGCSBCTTSCBCGGGGHHHHHHHCCC-
T ss_pred CCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 6543450345412642032213324641123456777411210335589867577877413478999
|
| >d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29104.48 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~pe~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS 80 (386)
T d1v8za1 1 MWFGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGA 80 (386)
T ss_dssp CEETTEECCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSB
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97678098848788899999999999999639899999999987338999855173766876289739999666877877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~KdR~a~~~i~~a~~~G~~~~v~~~s~Gn~g~a~A~aaa~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~ 160 (386)
T d1v8za1 81 HKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRT 160 (386)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 64168999999876528831675225226999999999976986430344115544179999998649827994687430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~ 240 (386)
T d1v8za1 161 LKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV 240 (386)
T ss_dssp HHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 88889989999986056654214544574336133310013544537888998628989889977887178899998764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~v~iigvep~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 320 (386)
T d1v8za1 241 NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYV 320 (386)
T ss_dssp TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEE
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf 23670599970576643355532000357655551021001068777603443222221245530577888754854999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~VtD~E~~~a~~~La~~EGI~~~~~sa~alA~a~kla~~~~~~~~VV~iltG~G~kD~~~~~~~~g 386 (386)
T d1v8za1 321 TVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSG 386 (386)
T ss_dssp EEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTSCTTCEEEEEECBBSGGGHHHHHHHHC
T ss_pred EECHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCC
T ss_conf 989999999999999965993566799999999998787199897999968885212999998539
|
| >d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Tryptophanyl-tRNA synthetase (TrpRS) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29104.42 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~pw~v~~~~~~~~dy~kl~~~fg~~~~~~~~~~~~~~~~~~~~h~~~rRg~~f~hrd~~~il~~~~~gkp~~vytG 80 (386)
T d1r6ta2 1 EDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTG 80 (386)
T ss_dssp CCEESSSCEECSCTTCCCHHHHHHHHTCEECCHHHHHHHHHHHCSCCCHHHHTTSEEEEESHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEC
T ss_conf 98438660668876666699999984888688899999997536886154533604422679999999974998589945
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~i~~~s~~~ 160 (386)
T d1r6ta2 81 RGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYM 160 (386)
T ss_dssp ECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEEEEEHHHHG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 17998402899999999999999721324489932517640456999999999999999999817895002899684799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~l~~~~~~~~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvpvG~DQ~~h~~ltR 240 (386)
T d1r6ta2 161 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTR 240 (386)
T ss_dssp GGCTTHHHHHHHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98899999999998756514888864335677676531279889999983470542255665420110262899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Dia~r~~~~~p~~l~~~~lpgL~G~~~KMSsS~~~s~I~l~D~~~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~ 320 (386)
T d1r6ta2 241 DVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFM 320 (386)
T ss_dssp HHGGGGTCCCCEEEEECCCEETTEEEEECCTTSTTCCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHH
T ss_pred HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99998278886221144556778743445567777434635988899997661143168765446000389841317999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~~~rekr~~~~~~~v~~~l~~~kl~ 386 (386)
T d1r6ta2 321 YLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLA 386 (386)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTSCCCCC
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999986987589999999976999989999999999999978999999998888999985546799
|
| >d1muwa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces olivochromogenes [TaxId: 1963]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Streptomyces olivochromogenes [TaxId: 1963]
Probab=100.00 E-value=0 Score=29102.51 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~p~~~~rF~~~~Wt~~~~g~dpFG~~tr~~~~~~d~~~~~~~lG~~~~~fHd~D~~P~~~~~~e~~~~~~~i~~~l~~ 80 (386)
T d1muwa_ 1 SYQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDA 80 (386)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99898445335886205765879999888999898999999998599879747775688899867889999999999985
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Gl~~~~~t~nlf~~p~~~~Ga~tspD~~vR~~Ai~~~k~aiDia~~LGa~~vv~W~G~~G~~~~~~~d~~~~~~~l~e~ 160 (386)
T d1muwa_ 81 TGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEA 160 (386)
T ss_dssp HTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 29701134156410200113787792999999999999999999998399848984787755677667999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~v~dya~~~g~~v~~~IEpkP~EP~~~~~~~t~~~al~~l~~~g~~~~~glnlD~gHa~~ag~~~~~~ia~a~~~grL 240 (386)
T d1muwa_ 161 FDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKL 240 (386)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf 99999999972999369982057887553310769999999997299531346644465330477715899999873867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~vhlNd~~~~~~D~DL~fG~~~~~~~~~~~~~L~~~Gy~G~~~FD~k~~R~~~~~~~~~~~~~~m~~~a~~~~~a~~~~ 320 (386)
T d1muwa_ 241 FHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGYEGPRHFDFKPPRTEDIDGVWASAAGCMRNYLILKERAAAFR 320 (386)
T ss_dssp CCCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHHHTCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34211533477743456676401789999999999559988330540367788766799999999999999999999865
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~d~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~e~Le~l~~~~l~g~r 386 (386)
T d1muwa_ 321 ADPEVQEALRASRLDELAQPTAADGVQELLADRTAFEDFDVDAAAARGMAFERLDQLAMDHLLGAR 386 (386)
T ss_dssp HCHHHHHHHHHTTHHHHTSCSCTTCHHHHHHCGGGTTTCCHHHHHHSCCCHHHHHHHHHHHHHTCC
T ss_pred HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 499999999986554113544445256677776520013813343255029999999999971379
|
| >d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 7, HDAC7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29102.06 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~Tg~vyd~~~l~H~~~~g~~~~HPE~p~Rl~~i~~~L~~~gl~~~~~~~~p~~a~~~~L~~vH~~~YI~~l~~~~~ 80 (386)
T d3c10a1 1 TLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPL 80 (386)
T ss_dssp CCTTCEEEECCGGGGGCCCTTCCGGGCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTT
T ss_pred CCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCHH
T ss_conf 99887799977788557899999899897989999999999966996578376789899999988299999999862605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~Aa~~aaG~~~~a~~~v~~~~~~~afa~~rppGHHA~~~ 160 (386)
T d3c10a1 81 SRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHS 160 (386)
T ss_dssp CSCCCCHHHHHHHHHC---CBCTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCCTTCBTT
T ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43112233321034555420367777666888645761089999998457888776542376544441244323545655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~GFC~fNdvAiaa~~l~~~~~~~rV~iiD~DvHhGnGTq~if~~~~~V~~~SiH~~~~~~~~p~tG~~~e~G~g~g~g 240 (386)
T d3c10a1 161 TAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEG 240 (386)
T ss_dssp BCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECTTTTSTTCCCCTTCCCCGGGTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66873433288999999986214677437742467887604676425543354333566545678889887638877766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~n~pl~~~l~~~~~d~~yl~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D~~pLg~l~lt~~~~~~~~~~l~~~~~~~ 320 (386)
T d3c10a1 241 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 320 (386)
T ss_dssp CEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 64456410136799983999999999999999866998899968825334675356367558999999999999873998
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~w~~~~~ 386 (386)
T d3c10a1 321 VVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQR 386 (386)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHHHTCCCCGGGCSGGGSCCCHHHHHHHHHHHHHHTTTCGGGCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 799968888865899999999999838999987841013588888999999999999886076329
|
| >d1v5da_ a.102.1.2 (A:) Chitosanase {Bacillus sp., strain k17 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Chitosanase species: Bacillus sp., strain k17 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29101.52 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~pfp~~~~y~~~~~~~~~~q~~~~~~~~~~y~~wk~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~t~SEGqgYGM 80 (386)
T d1v5da_ 1 AKEMKPFPQQVNYAGVIKPNHVTQESLNASVRSYYDNWKKKYLKNDLSSLPGGYYVKGEITGDADGFKPLGTSEGQGYGM 80 (386)
T ss_dssp CCCSSCSCCCCCCTTCCCCCSSCHHHHHHHHHHHHHHHHHHHEECCCTTSTTCCEECCCCCCCBTTBCCCEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHH
T ss_conf 98788898753536774888667899999999999999999853367777764001465556788898753005888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~Av~~~~~~~nd~~~Fd~lw~wt~~~l~~~~~~L~aW~~~~~~~~v~d~nsAtDgDl~iA~ALl~A~~~Wg~~~~~~Y~ 160 (386)
T d1v5da_ 81 IITVLMAGYDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYL 160 (386)
T ss_dssp HHHHHTBTTBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99998476775619999999999999860679998668857999877799988768999999999999774885178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~A~~ii~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~~~~fa~~~~d~~W~~v~~~~~~ll~~~~~~~~~~tG 240 (386)
T d1v5da_ 161 KEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTG 240 (386)
T ss_dssp HHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999998750578887426888788898755831054999999997458972999999999999998763188768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 L~PDw~~~~~~~~~~~~~~~~~~~~~~~~ydA~Rvpl~la~d~~w~g~~~a~~~~~~~~~f~~~~~~~~~~~i~~~y~l~ 320 (386)
T d1v5da_ 241 LISDFVVKNPPQPAPKDFLDESEYTNAYYYNASRVPLRIVMDYAMYGEKRSKVISDKVSSWIQNKTNGNPSKIVDGYQLN 320 (386)
T ss_dssp CCCSSEETTTTEECCTTGGGSCTTTTSBCTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTCGGGCCSCBCTT
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99631212786767765677777888724119999999998886427804789999999999986147976556632147
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 G~~~~~~~~~~~~a~~~~aa~~~~~~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~lsGn~~~p~p 386 (386)
T d1v5da_ 321 GSNIGSYPTAVFVSPFIAASITSSNNQKWVNSGWDWMKNKRERYFSDSYNLLTMLFITGNWWKPVP 386 (386)
T ss_dssp SCBCCCSCCHHHHHHHHHTTTTCGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 742688875899999999862873169999998733357778857999999999997388888998
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=100.00 E-value=0 Score=29037.49 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (385)
T d1ejxc2 1 GIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQPDALREQV 80 (385)
T ss_dssp EEEEEEECSCTTHHHHHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSSHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999866973663686688877777573888899999998655078331052116669868999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~AGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfvedT~~a~~gRtiH~~H~EGaGGGHAPDii~~~~ 160 (385)
T d1ejxc2 81 AAGVIGLKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACA 160 (385)
T ss_dssp HHTCSEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEESSTTSTTSSSTTTGGGGGG
T ss_pred HHHHCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHC
T ss_conf 71132144775235675899999876754183589760535400200214887579730332025677786631567624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~nvlpsSTnPT~P~t~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTiaAEdvLhD~GaiSi~sSDsQaMGRvGE 240 (385)
T d1ejxc2 161 HPNILPSSTNPTLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGE 240 (385)
T ss_dssp CTTEEEEEESTTSSCBTTHHHHHHHHHHHC----------CHHHHHHSCHHHHHHHHHHHHTTSSCEEECCTTSSSCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 68535789998878866736764772332046898875677664233530123267776345743442153332576774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 vi~RtwqtA~kmk~~rG~l~~d~~~~DN~RvkRYIAKYTINPAIahGIsh~VGMFGA~G~A~~~tSvtFVSqaAid~gi~ 320 (385)
T d1ejxc2 241 VILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGMFGALGSARHHCRLTFLSQAAAANGVA 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHHHHTHHHHHHTTCTTTSSCGGGSHHHHHHHCEEEECHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEECHHHHHCCCH
T ss_conf 11020787999987603687777777624777666662368188768455135323456555457138856888867684
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~LgL~K~lvpVkn~R~ItK~DM~~Nda~P~IeVDPeTYeV~aDGelltcePA~~LPLAQRYFLF 385 (385)
T d1ejxc2 321 ERLNLRSAIAVVKGCRTVQKADMVHNSLQPNITVDAQTYEVRVDGELITSEPADVLPMAQRYFLF 385 (385)
T ss_dssp HHTTCCSEEEECCCTTTCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSSCSSSTTTCCC
T ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 77388760686148887787786015789982789997689989999046765667631110176
|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Lactaldehyde reductase FucO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29031.44 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~~~~~~~fG~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~ 80 (385)
T d1rrma_ 1 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 80 (385)
T ss_dssp CCEEEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred CCCEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 99526669972798689999999999769997999989655658089999999987598599986826997989999886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse~t~~avi~~~~~~~ 160 (385)
T d1rrma_ 81 GVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR 160 (385)
T ss_dssp HHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTCSEEEEEETTTTE
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 54303588889866988422699999999638753026665043222478774674366544643234442224444331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 K~~~~~~~~~P~~~i~Dp~l~~~~P~~~~a~~g~Dal~h~~E~~~s~~~~p~~~~~a~~a~~~~~~~l~~~~~~~~~~~~ 240 (385)
T d1rrma_ 161 KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE 240 (385)
T ss_dssp EEEEECGGGCCSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EEEEEEEECCCCCCCCHHHHHCCCCHHEEEECHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 01355420135322006777327980126400364664112111113320001277899999999752432000056899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~a~~~ag~~~~~~~~g~~hai~~~l~~~~~i~HG~a~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 320 (385)
T d1rrma_ 241 EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARN 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999976651676400053203200233457510001436889987335269999999998388656999899999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~i~~i~~~~~~lglP~~L~d~Gv~~~~l~~ia~~a~~~~~~~~nP~~~t~~di~~il~~a~~g~ 385 (385)
T d1rrma_ 321 AAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAWEGG 385 (385)
T ss_dssp HHHHHHHHHHHHTTCCSSGGGGTCCGGGHHHHHHHHHTCGGGGGCSSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999859999988829899999999999985720059994389999999999997489
|
| >d1xmxa_ c.52.1.26 (A:) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Restriction endonuclease-like superfamily: Restriction endonuclease-like family: Hypothetical protein VC1899 domain: Hypothetical protein VC1899 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=29030.19 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~m~~hv~~i~~~~~~n~~p~l~~~~~p~~~v~i~t~~~~~~~e~L~~~lk~~~i~~e~~~i~~~~d~~~I~~~l~~~~~ 80 (385)
T d1xmxa_ 1 NAMAIHVGIIDQDPVRLVTPLLDHRTVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGSNTSAIKSAIRELAE 80 (385)
T ss_dssp CTTEEEEEECCSSCHHHHHHHHSTTCCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 96289999963772435568654788886699996743699999999999846986168745875576999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~v~lN~TGGTK~Msl~ay~~~r~~~~~~~Y~d~~~~rl~~l~~~~~~~~~~~~~i~i~d~l~~~~~~~~~~~~ 160 (385)
T d1xmxa_ 81 TLKARGEEVKFNASCGLRHRLLSAYEVFRSYHWPIFVVEPNSDCLCWLYPEGNNDTQVQDRITIADYLTIFGARGEFNEH 160 (385)
T ss_dssp HHHHHTCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEECTTTCEEEEEESTTSCCEECCCCCCHHHHHHHTTCEEECC--
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCC
T ss_conf 62203873999916766888999999998559846999769966999667767675577878899999984033000566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~el~~~l~~ln~~~~~~~~~~~~~~~~s~~~~~~~~~~~ll~~l~~~~~~~~~~~~l~F 240 (385)
T d1xmxa_ 161 QLSPQLDQQLYQLGERWASNALELGPGLATLNYLATTCRKEQKLDVELSDKQQGYRELNLLLSDLVEAKIASYENGILTF 240 (385)
T ss_dssp --CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSEEECCHHHHTCHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf 68866789999999998634776767999999986512212010244462244536788999988753432214863231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~a~~Fl~G~WLE~yv~~~l~~~~~~~~~~~d~~~~v~i~~~~~~~~~~nElDv~~~~~~~l~~IECKt~~~~~~~~~ 320 (385)
T d1xmxa_ 241 INEEARRFANGEWLETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVNNKLHIIECKTKGMRDDGDD 320 (385)
T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEESSCCCC-CCC
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 41778743588089999999999877540445026767798326888765532689999799999999568887754578
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~l~kl~~l~~~lgG~~~r~~LVs~~~~~~~~~~ra~~~~i~vI~~~~l~~l~~~L~~w~~~~~~~ 385 (385)
T d1xmxa_ 321 TLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKTHLTQWFKAAGGN 385 (385)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEEESSCCCHHHHHHHHHHTCEEECGGGGGGHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999998289532499999058847799999866949983888899999999999973799
|
| >d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Ovalbumin species: Hen (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29029.89 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~l~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~ 80 (385)
T d1uhga_ 1 GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVH 80 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
T ss_conf 96789999999999999861396986998889999999999986775899999997388877664301444203388999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~l~v~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~i~~~ 160 (385)
T d1uhga_ 81 SSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNV 160 (385)
T ss_dssp HHHHHHHHHHTSCCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999963899873699998888866765448899999987097334564311799999999999998706886566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~~~~l~~~t~l~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~~~~~~v~Lpy~~~~~s 240 (385)
T d1uhga_ 161 LQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMS 240 (385)
T ss_dssp SCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTSSEE
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEECCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf 78667896544114542799542046664555540664258994353002001021234545566817887132489758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 m~iilP~~~~~l~~~~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~adfs~is~~~~ 320 (385)
T d1uhga_ 241 MLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSSSANLSGISSAES 320 (385)
T ss_dssp EEEEEESSTTCHHHHHHHCCHHHHHHHTSTTTCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGSTTCCCTTTBCSTT
T ss_pred EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEHHHHHHHCCCCHHHCCCCCCCCCCCCCC
T ss_conf 99997776676155554213556999763430424599997104876311007998875598111068787656779998
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 l~vs~i~q~~~i~v~E~Gt~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 385 (385)
T d1uhga_ 321 LKISQAVHAAHAEINEAGREVVGSAEAGVDAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP 385 (385)
T ss_dssp CCEEEEEEEEEEEECSCEEECCCHHHHHHHHTTCCCEEECCSCEEEEEEETTTCCEEEEEEESCC
T ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 06552788999998998713010120001367899779913999999998999968999994398
|
| >d2ix0a4 b.40.4.16 (A:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exoribonuclease 2, RNB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29030.47 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 e~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisie~~~~~~~~l~VHIADva~~v~~~s~Ld~~A~~R~~S~ 80 (385)
T d2ix0a4 1 EAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTN 80 (385)
T ss_dssp SCCCCCCCCCCCCCCCCEECTTSCCBEEECSSCCCCCEEEEEEEEGGGEEEEEEEECCGGGTSCTTSHHHHHHHHHCBCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCE
T ss_conf 99875431001467874208899989976999942665589999689919999998777887598999999999968838
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~l~~~g~i~~~~~~~~s~I~s~~~ltY~~v~~~l~~~~~~~~~~~~ 160 (385)
T d2ix0a4 81 YLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEA 160 (385)
T ss_dssp EETTEEECSSCHHHHHTTSSCCTTCEEEEEEEEEEECTTCCBCSCCEEEEEEEECCCEEEHHHHHHHHTTCSSCCCSSHH
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH
T ss_conf 89999778898166420014566532047778999856761401336876789726757499999997403334532022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~l~~L~~~~~~lr~~R~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~lieE~MilaN~~va~~l~~~~~~~i 240 (385)
T d2ix0a4 161 IAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGI 240 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCCCEEEEEECTTSCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 59999999999999999874167621343022010244455413787404088888888887766899999997348873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~R~~~~p~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~a~ys~~~~~H~gLgl~~Y 320 (385)
T d2ix0a4 241 YNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAY 320 (385)
T ss_dssp EEEBCCSCGGGHHHHHHHHHHTTCCCCTTGGGSHHHHHHHHHHHHHSSSSHHHHHTGGGCCCCEEESSCCCBTTTTBSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
T ss_conf 22222357477899999999710366855334625677776520355416789999998643103798877413084612
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 thfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~ei~~~~~~~~~~a~~aer~~~~~~~~~~lk~~ 385 (385)
T d2ix0a4 321 ATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDK 385 (385)
T ss_dssp BCCSCTTTBHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 01586776377899999999997699999889999999999999999999999999999985789
|
| >d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHH phosphoesterases superfamily: DHH phosphoesterases family: Exonuclease RecJ domain: Exonuclease RecJ species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29027.30 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~l~~m~~A~~~i~~ai~~~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip~R~~eGyGl~~~~i~~~~~~ 80 (385)
T d1ir6a_ 1 PLALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEA 80 (385)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECCCTTTSCSSCCGGGHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf 97676735899999999999977997999927786067999999999998899759987786656998689999998533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~LiItvD~G~~~~e~i~~~~~~gi~vIv~DHH~~~~~~~~~~iv~~~~~~~~~~~~~gaGva~~l~~~l~~~~~~~~~~ 160 (385)
T d1ir6a_ 81 SDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPL 160 (385)
T ss_dssp CSEEEESSCCTTCGGGHHHHTTSCCEEEEECCSCCCSSCCSSEEECGGGSTTCCCCCCHHHHHHHHHHHHHHTTTCCCCG
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 77699823652203667667632872321465465657401212157678850101302578999999886432442202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~l~L~aiGtiaD~~pL~~eNR~lv~~gl~~~~~~~~~g~~~L~~~~~~~~~~~di~f~i~P~iNA~GRl~~a~~a~~lL 240 (385)
T d1ir6a_ 161 EYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLL 240 (385)
T ss_dssp GGHHHHHHHHHHTTCCCSSHHHHHHHHHHHHCTTCSCHHHHHHHHHTTCCSCSHHHHHTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 44455456455455401367889987777785114558899997542213201221111131113334444310212444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~a~~~a~~l~~~N~~Rk~~~~~i~~~a~~~~~~~~~~i~~~~~~~~~GviGivAsrl~~~~~kP~iv~~~~kGS 320 (385)
T d1ir6a_ 241 LTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGT 320 (385)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTSSSEEEECTTCCHHHHHHHHHHHHHHHCSCEEEEETTEEE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEE
T ss_conf 41236789999999887777899999999999875430335159995377662022045899999729978999667387
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~Rs~~g~~l~~~l~~~~~~l~~~GGH~~AaG~~i~~~~~~~F~~~l~~~~~~~~~~~~~~~~~d~ 385 (385)
T d1ir6a_ 321 VRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREVALLDL 385 (385)
T ss_dssp EECCSSCCHHHHHHTTGGGCSEEEECSSEEEEECCGGGHHHHHHHHHHHHHSSCCTTTTCCSTTC
T ss_pred EECCCCCCHHHHHHHHHCHHHCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
T ss_conf 76899978999999874530137991670467974989999999999999856353220442479
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29025.37 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLse~~~~~VLvLEaG~~~~~~~~~~~~~~~~~~~~~~~~dw~~~t 80 (385)
T d1cf3a1 1 GIEASLLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYET 80 (385)
T ss_dssp CHHHHSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEEESSCCCTTSCHHHHBGGGTTTTTTSTTBCCEEC
T ss_pred CCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 96605218912126996889998968899999999987879829998889998787832048767755218978768605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~r~~~~~~G~~lGGsS~in~~~~~R~~~~d~d~w~~~~~~~gw~~~~l~Pyf~k~E~~~~~~~~~~~~~~~~~~ 160 (385)
T d1cf3a1 81 VELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNA 160 (385)
T ss_dssp CCCTTTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCG
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 57677894365221002466512331353215866611210036878676336688999887610787311221122355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~d~n~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~nl 240 (385)
T d1cf3a1 161 SCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL 240 (385)
T ss_dssp GGSCSSSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTGGGTTCTTE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCC
T ss_conf 55677543334565545556878999999999769997677555665533223332322333223556533732107743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~i~t~~~V~rI~~~~~~~~~ra~GV~~~~~~g~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~ 320 (385)
T d1cf3a1 241 QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPV 320 (385)
T ss_dssp EEEESCEEEEEEEECSSSSCEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCT
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCEEEECCCHHHCHHHHHHCCCCCHHHHHHCCCCEEEECCC
T ss_conf 33377368888871899654799999986899789999688899868535499999865998378998779986998974
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 g~~~~~~~~~~~vv~~~~~v~g~~~lr~v~~s~~p~~~~~~~~~~~~~~a~~~~d~i~~~~~~~~ 385 (385)
T d1cf3a1 321 GLCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ 385 (385)
T ss_dssp TCTCBSCGGGTCSBCTTSBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04206887766614665542660571742575786212675148799985366789998775449
|
| >d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp175a1 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29024.27 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~dp~~~~~~~~~kyg~v~~~~~~~p~v~v~dp~~v~~il~~~~~~~~~~~~~~~~~~~G~gl~ 80 (385)
T d1n97a_ 1 MKRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLL 80 (385)
T ss_dssp CEECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEECCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
T ss_conf 98888553538799987799999999999789789996998799989999999997289977688607779998579500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~g~~wk~~R~~l~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~vdl~~~l~~~~~~vi~~~~fg~~~~~~~~~~~~~~ 160 (385)
T d1n97a_ 81 TDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKA 160 (385)
T ss_dssp TCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 37979999999997234144432231025778999987650455335788888875520255553465432015666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~ 240 (385)
T d1n97a_ 161 LDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHR 240 (385)
T ss_dssp HHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 56777777666665455899999986515678899887511104697889999999988765024211211025676541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 P~v~~~l~~E~~~~~a~i~EtlRl~p~~~~~~r~~~~d~~~~g~~i~~g~~v~~~~~~~~~~~~~dp~~F~PeRf~~~~~ 320 (385)
T d1n97a_ 241 PDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEAFRPERFLEERG 320 (385)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHHSSTTTTSCCTTHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 02333333333332101201122333332212233322233333333333333332210011478876638432376567
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~p~~~~~~r~r~ 385 (385)
T d1n97a_ 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPRE 385 (385)
T ss_dssp CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCEEESSSEEETTCCEECCBC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCEEEEEEC
T ss_conf 88887067899765690399999999999999998378896898732460578646981788609
|
| >d2c5wb1 e.3.1.1 (B:266-650) Penicillin-binding protein 1a, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 1a, transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29023.36 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~yp~~~d~~~~e~i~~~~~~~~~~~~~~G~~I~tTiD~~lQ~~~e~~~~~~~~~~~~~~~~~~a~vv~d~~TG~IlA~v 80 (385)
T d2c5wb1 1 SNYPAYMDNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQL 80 (385)
T ss_dssp CCSCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHCSSSCCCSCSSCEEEEEEEETTTCBEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 99748999999999998777644232069987994789999999999997534312678663289999988999399999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~yaaAle~g~~~~~~~~~~d~~~~~~~~~~~~~n~~~~~~G~itl~~al 160 (385)
T d2c5wb1 81 GARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYAL 160 (385)
T ss_dssp CCSSCCCCCTTCCCTTTCCCSCCGGGHHHHHTHHHHHHTTSCSBSSCEEEESSCBCTTSSCBCCCTTSCCCEEEEHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
T ss_conf 55655544434543201143467740447899999986497002331123454211136866422465565136650333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~S~N~~~~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~tplqla~aya~iAngG~~~~P~~i~~i 240 (385)
T d2c5wb1 161 QQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKV 240 (385)
T ss_dssp HTTCHHHHHHHHHHHCHHHHHHHHHTTTCBCSSCCGGGGSCCCCSSCCSSBSCCHHHHHHHHHHHHTTSEEECCBSEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 31655300345666403368999997087545653223445441135885256899999988765147643221430122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~d~~~~~~~~~~~~~~v~s~~~a~~~~~~m~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~WFv 320 (385)
T d2c5wb1 241 VFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFA 320 (385)
T ss_dssp EETTSCEEECCCCEEECSCHHHHHHHHHHHHHHHHHSTTGGGCCTTCCCEEEEEECCCCHHHHHHTCCCSSCEESCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 12344422123455420477888888764110135775221356565313565565666665444435564222205999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 G~~P~~~~~Vwvg~~~~~~~~~~~G~~~Aapi~~~im~~~~~~~~~~~f~~P~gi~~~g~~~~~~ 385 (385)
T d2c5wb1 321 GYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIPEGLYRNGEFVFKN 385 (385)
T ss_dssp EECSSEEEEEEEECSSTTSCEEGGGGGHHHHHHHHHHHHHHSSSCCCCCCCCTTEEEETTEEEEC
T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC
T ss_conf 55998899999940788887688722889999999999997269977799999867767089529
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=100.00 E-value=0 Score=29022.56 Aligned_cols=1 Identities=0% Similarity=-1.823 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~ 80 (385)
T d2b9va2 1 HDPLSVQTGSDIPASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMRE 80 (385)
T ss_dssp CCTTTCCCSCSCC---------CCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99754345777786665887667797686889989999889999997189996018999816788876556775322354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~ 160 (385)
T d2b9va2 81 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGF 160 (385)
T ss_dssp HSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHH
T ss_pred CCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
T ss_conf 43057999996896899976774368898512045210011220155787799999999856674446410045667899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~a~~~~~~l~a~~~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (385)
T d2b9va2 161 TVVMALLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFAT 240 (385)
T ss_dssp HHHHHHTSCCTTEEEEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
T ss_conf 99999854677634999812456532101234773011210899986541014586411114678889987252445320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~p~~~~~~~~p~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~~~g~~~~~~~l~~~~~~~~~~LiiGPw~ 320 (385)
T d2b9va2 241 QAGLDQYPFWQRMHAHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQEDMWGAIHAWQALKDADVKAPNTLVMGPWR 320 (385)
T ss_dssp HTTGGGCHHHHHHHHCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSCSSHHHHHHHHHHHTTCSSCEEEEEESCC
T ss_pred HCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 10442134566530376543122315846888633556762899841368765433789999875156888579993776
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 H~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~WFD~~LKG~~~~~~~p~v~~~~~G~~~Wr~~~~W 385 (385)
T d2b9va2 321 HSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPGSASVHLPDAIIYNTGDQKWDYYRSW 385 (385)
T ss_dssp TTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 77866566666664567520013689999999999708999999999879998789827418979
|
| >d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28957.46 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~k~~T~~vh~G~~~~~~~gav~pPI~~sst~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEgg~~a~~~sSGMaAi~~ 80 (384)
T d1cs1a_ 1 RKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHL 80 (384)
T ss_dssp CCHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf 97404214689898888998259844888746089776568743189887899999999998299706884372799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~i 160 (384)
T d1cs1a_ 81 VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHL 160 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHH
T ss_pred HHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHH
T ss_conf 98631445550013465200246665421122333222356788799986216666279971456653010457887554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~g~~~vVDNT~atP~~~~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~ 240 (384)
T d1cs1a_ 161 AREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLL 240 (384)
T ss_dssp HHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 54148679971553474546664468889998063003667774443345782665420011221122024500389996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 rgL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~~~~a~~f~~~L~l~~ 320 (384)
T d1cs1a_ 241 RGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFT 320 (384)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCE
T ss_conf 12111478998999999999996445886446641223301489998750689861268752466999999998389155
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlEd~eDLi~Dl~~AL~aa~~g 384 (384)
T d1cs1a_ 321 LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG 384 (384)
T ss_dssp EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 5626687540430661015100799999866989296999865099999999999999986079
|
| >d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Aerolisin/ETX pore-forming domain superfamily: Aerolisin/ETX pore-forming domain family: (Pro)aerolysin, pore-forming lobe domain: (Pro)aerolysin, pore-forming lobe species: Aeromonas hydrophila [TaxId: 644]
Probab=100.00 E-value=0 Score=28955.48 Aligned_cols=1 Identities=100% Similarity=1.699 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ip~~~~~~~~~~d~~~~~~~~v~~~~~fi~pls~LAh~LGY~W~gg~~~q~Vged~~~~r~gd~w~~~~~n~g~c~gyrc 80 (384)
T d3c0na2 1 IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRC 80 (384)
T ss_dssp CCCCCCEEECSCCHHHHHHHHHTCTTTTHHHHHHHHHHHTBSCCSCTTCSSTTCSEEEEECSSSEEEEECCCSCCCSTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCEECCCCEEEECCCEEEEECCCCCCCCCEEE
T ss_conf 98654411389987887888762870011569999865073677677874114452566438767996256899774451
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~er~ki~~~nf~~~i~~~~f~~G~~~v~~~epi~t~s~~a~N~sDt~qt~itvt~~~t~T~TWSkT~s~~~s~sV~ik~s 160 (384)
T d3c0na2 81 GDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDSDTPQSGYDVTLRGDTATNWSKTNTYGLSEKVTTKNK 160 (384)
T ss_dssp TSCCEEEEEEEEEEEEEEEEEECCCSEEEEEEEEEEEEEEEECSSSCBCCEEEEEEEEEEEEEEECCSSSGGGTCBCSSC
T ss_pred CCCCEEEEEEEEEEECCCCEECCCCEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_conf 56215898756778657644427818844542899999997389886158899999998423898654778889999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 f~iPligeteisvs~S~n~s~s~s~t~S~T~T~t~s~~VtVPP~Skv~V~i~l~rs~idVPYt~t~~I~Ydv~~~gFLRw 240 (384)
T d3c0na2 161 FKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRW 240 (384)
T ss_dssp EECCCCSSSCCCCEECTTSCGGGCCEEEEEEEECCEECCCBCTTEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEBCT
T ss_pred EECCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_conf 85663514469999976788850675137899888876301898359999999866873556899999998987116741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 gGNa~~~hp~~Rpt~~~tf~~g~~~~~~~~i~yq~d~r~ipg~~~~wdW~w~~~~~g~~~m~~~~~~~~R~~~s~isG~f 320 (384)
T d3c0na2 241 GGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDF 320 (384)
T ss_dssp TCCCBTTCCSSCCEEEEEEEESSCCCSTTCHHHHHHTTTCGGGCSSBCHHHHHHHHCHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 56213448988886426886057888743411243202357876511364155553567777777664222346434217
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~a~sq~~g~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 384 (384)
T d3c0na2 321 SAESQFAGNIEIGAPVPLAADSKVRRARSVDGAGQGLRLEIPLDAQELSGLGFNNVSLSVTPAA 384 (384)
T ss_dssp EEEEEEECCCEECCCEEC-----------------CCEEECCCCHHHHHHHTCEEEEEEEEECC
T ss_pred EEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECC
T ss_conf 8850211015524711158068642346664467863897347977886367674389976389
|
| >d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylococcus capsulatus [TaxId: 414]
Probab=100.00 E-value=0 Score=28955.45 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~a~~~~~~~~~r~~~~~~~p~~rr~seYE~vT~~~qp~p~~~~~~~~~~~W~~~~~~g~p~y~~ 80 (384)
T d1mtyb_ 1 ERRRGLTDPEMAAVILKALPEAPLDGNNKMGYFVTPRWKRLTEYEALTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGN 80 (384)
T ss_dssp CCCCTTTCHHHHHHHHHHCCSSCSCSCCCTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCG
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 98667998778899861277886667776424467577896643510227889956617767647764613899998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~Tal~~~DW~~frDP~q~~yrtY~~~qae~e~~v~~~~d~~~~~~~~~~l~~~w~~~~L~~~l~p~r~~E~ga~~~~a~ 160 (384)
T d1mtyb_ 81 ETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDEFINRYWGAFLFNEYGLFNAHSQ 160 (384)
T ss_dssp GGCSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGSCHHHHHTTTTTHHHHHHHHHHHHHHTTHH
T ss_pred CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 64313447746535801889999999999999999999999996696211999999999999860240799999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~r~~~g~~i~~a~~fqa~DeLR~aQ~i~~~~~~L~~~~pgf~~~~~~~k~~W~~dp~wQg~R~~vE~~l~~~~Dw~E~~ 240 (384)
T d1mtyb_ 161 GAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEGLWQEVFDWNESA 240 (384)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCSTTHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 98646868999999998766888999999999999874789862337998886048065779999998987114499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 vA~Nlv~dpll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~l~~dpe~~~~Nr~llq~Wi~~W~ 320 (384)
T d1mtyb_ 241 FSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPEFSDYNRTVMRNWTGKWL 320 (384)
T ss_dssp HHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99876488644899999999999997698047999999998999999899999999984585332668999999999999
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~a~~Al~~~~pi~s~~p~~~~~~~~~~a~~~rv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (384)
T d1mtyb_ 321 EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLAGLK 384 (384)
T ss_dssp HHHHHHHHHHGGGGGGSCTTSCCHHHHHHHHHHHHHHHHHHTGGGGTCCCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 9999999987687610677878889999999999987653024103665458899999972369
|
| >d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) species: Amycolatopsis mediterranei [TaxId: 33910]
Probab=100.00 E-value=0 Score=28950.15 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~g~~v~~fE~~~a~~~g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p 80 (384)
T d1b9ha_ 1 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVP 80 (384)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 98989898887999999999999739946568989999999999997969399967889999999998499988989981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ 160 (384)
T d1b9ha_ 81 AFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAH 160 (384)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEC
T ss_conf 43223221222222233211233444435665441020023332222333322233443110222333356553104033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aai 240 (384)
T d1b9ha_ 161 GARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASV 240 (384)
T ss_dssp TCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHH
T ss_pred CCCCCCEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 60048983675520000024555434433431243224999998899985689876666432312356632235301213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~~qL~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~y~ 320 (384)
T d1b9ha_ 241 LRAQLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR 320 (384)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 33343211321123433446666664225666443222222222333310001000222599999999987998553072
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~~ 384 (384)
T d1b9ha_ 321 AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA 384 (384)
T ss_dssp CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 2213978885488744433344679899999839798647999998999999999999999609
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=100.00 E-value=0 Score=28947.86 Aligned_cols=1 Identities=100% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~~ 80 (384)
T d2fvka2 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLIL 80 (384)
T ss_dssp CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEEC
T ss_pred CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 92538757788999987610329999999980895599989999999997899999999999999734850206578987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~el~~~~~~~~~~~~Gv~~~k~f~~~~~~~~~~~~l~~~l~~~~~~g~~v~~H~Ed~~~~~~~~~~~~~~ 160 (384)
T d2fvka2 81 FQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQ 160 (384)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTTTBCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
T ss_conf 57787661277877678888705575441213325522344779999999999754982451322078898887777655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~~~~~~~rP~~aE~~av~r~~~la~~~g~~lhi~HiSt~~~ve~I~~ak~~G~~Vt~Et~ph~L~l~~~~~~~~~~ 240 (384)
T d2fvka2 161 GLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHH 240 (384)
T ss_dssp TCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSCCCHHHHHHHHHHHHHTCCEEEEECHHHHHCCGGGGSCC--
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHHCCCCC
T ss_conf 98774332454453213678999999887519607722335612367899853049978998376776146301024442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~IaSDHaP~~~~eK~~~~~~~~~ 320 (384)
T d2fvka2 241 GEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRA 320 (384)
T ss_dssp ------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSEECCCBCCCBSSCCSSTTBGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCC
T ss_conf 22111223333222122223554310137516976999987789999977447964279627888788883355333333
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~df~~ap~G~~gle~~lpll~~~~v~~~~~~sl~~lv~~~s~nPAki~Gl~p~KGs 384 (384)
T d2fvka2 321 FDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGS 384 (384)
T ss_dssp EEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 3433345676310999974599899999999986489899999999996999999499998998
|
| >d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitin ABC lyase I species: Proteus vulgaris [TaxId: 585]
Probab=100.00 E-value=0 Score=28947.08 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~p~~~~T~~~~~~~d~ir~R~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ng~~~g~pi~~~~~~ 80 (384)
T d1hn0a1 1 EPEIQFHNVKPQLPVTPENLAAIDLIRQRLINEFVGGEKETNLALEENISKLKSDFDALNIHTLANGGTQGRHLITDKQI 80 (384)
T ss_dssp CCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHSSCCCTTCCCCCCHHHHHHHHHTTCCEECTTSCEECCCEECTTGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98777677899888896788899999999999872688652157777899999999985686456874247755562012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~aY~~~g~~~~~~el~~~i~~~~d~l~dQg~~~gS~~~~~nww~~~i 160 (384)
T d1hn0a1 81 IIYQPENLNSQDKQLFDNYVILGNYTTLMFNISRAYVLEKDPTQKAQLKQMYLLMTKHLLDQGFVKGSALVTTHHWGYSS 160 (384)
T ss_dssp GGGCGGGSCHHHHHHHTTSEEHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCSTTCCCSCCTTHHHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHH
T ss_conf 20577676533344431266899999999999999747887322399999999999999872320378777673112238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 r~~~~a~~Lm~d~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~n~D~~~t~~~~~l~~~Ll~~d~~e~i~~l~~l~ 240 (384)
T d1hn0a1 161 RWWYISTLLMSDALKEANLQTQVYDSLLWYSREFKSSFDMKVSADSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNTFS 240 (384)
T ss_dssp HHHHHHHHHTHHHHHHTTCHHHHHHHHHHHGGGGHHHHTCCCCTTTTCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 77988999987753226789999999987446864245676677850378999999999999985599199999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~~~~~vt~G~~dGfk~DGS~~qH~~~Y~gYg~~~l~~~~~~~~ll~gT~f~~~~~~~~~l~~~l~~~~~~~~~~~~ 320 (384)
T d1hn0a1 241 HYITGALTQVPPGGKDGLRPDGTAWRHEGNYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKAMVSAWIYSNPEVG 320 (384)
T ss_dssp HHHHHHHHSCCSTTCSEECTTSCEEETTEECHHHHHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHHHTBSSBBC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99887750478887886457887550678774269999999999999967998767989999999999999998454466
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~GR~p~~~~~~~~~~~a~~~~al~g~~~~D~~~A~~ylrl~~~~~~~~~~~~~~~~~pa~~ 384 (384)
T d1hn0a1 321 LPLAGRHPFNSPSLKSVAQGYYWLAMSAKSSPDKTLASIYLAISDKTQNESTAIFGETITPASL 384 (384)
T ss_dssp GGGCTTCTTSCCBGGGGHHHHHHHHTTSTTSCCHHHHHHHHHHHTCCHHHHHHHHSSCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 5555777899875543189999997078866799999999987347785416676158787879
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=0 Score=28949.04 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~pi~~~f~D~~l~~~~~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~ 80 (384)
T d2omza2 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD 80 (384)
T ss_dssp CSCCCCSSCEEHHHHSCSHHHHHHHHHHTTCSSTTSEECHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 97652589998331320889999999986777778863988957878998999898776242458999989681881798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 160 (384)
T d2omza2 81 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 160 (384)
T ss_dssp CGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86334771101030134333222211123343334433222222222222222211213466313100232222112222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l 240 (384)
T d2omza2 161 FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 240 (384)
T ss_dssp EEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGC
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCC
T ss_conf 21232201111245421101122243332110022353233303577447878644457787888877777896134325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~ 320 (384)
T d2omza2 241 TNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCC
T ss_conf 65341004467447877535546687754567445787732356522223323233333221000024676777788778
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~l~~l~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 321 DISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 384 (384)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCC
T ss_conf 9845366898898989899899974670899999898979958998000039999996397895
|
| >d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: ArgJ-like domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) species: Streptomyces clavuligerus [TaxId: 1901]
Probab=100.00 E-value=0 Score=28880.81 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 sPkGf~~~~~~aGiK~~~r~DL~li~~~~~~~~AgvFT~N~~~AApV~~~r~~l~~~~~ravvvNSGnANA~TG~~G~~~ 80 (383)
T d1vz6a_ 1 TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEEN 80 (383)
T ss_dssp CCTTEEEEEECCCSSTTCCCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTTTSBCCEEEEEEEECCCSCHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHH
T ss_conf 99859999999536679998689999579976999973687530151998987526884299995374111115888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~~~~~~A~~l~i~~~~Vl~aSTGVIG~~Lp~~kI~~~i~~l~~~l~~~~~~~AA~AImTTDt~pK~~~i~~~~~~i~G 160 (383)
T d1vz6a_ 81 AREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTRPKEVRVSVGGATLVG 160 (383)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSSBCHHHHHHHTCSSCSSCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf 99999876553045753145512420101464113344332112232343366544453066420258999720424777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 iaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~l~~~v~~sFN~ItVDGDtSTNDtv~~lAnG~~~~~~~~~f~~aL~~v 240 (383)
T d1vz6a_ 161 IAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAGEFEEALHTA 240 (383)
T ss_dssp EEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred EEECCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 86014320555452478999615567688999999864145000654588887758999845875321078777778899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~LA~~Iv~DGEGATK~i~v~V~gA~s~~dA~~iAr~ia~S~LVKtA~~G~DpNWGRI~aAiG~~~~~~~~d~~~i~i~ 320 (383)
T d1vz6a_ 241 ALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIR 320 (383)
T ss_dssp HHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEEE
T ss_conf 99999998636533225899998058999999999999752299998873458847777766423567766662425999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~v~~~g~~~~~~~~~~~~~~~~~m~~~ei~I~vdL~~G~~~~~~wtcDLt~~YV~INad 383 (383)
T d1vz6a_ 321 FGEVEVYPPKARGDQADDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE 383 (383)
T ss_dssp ETTEEEECC-------CHHHHHHHHHHTTSSEEEEEEECCSSSEEEEEEEECCCHHHHHHHHC
T ss_pred ECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCHHCCCCC
T ss_conf 899999963667887733559999987457848999997888922899907698322102689
|
| >d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28878.15 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~i~~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g 80 (383)
T d1bs0a_ 1 SWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG 80 (383)
T ss_dssp CHHHHHHHHHHHCCGGGCCCCCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 95799999999999819971112457888876998996899987653026678989999999999983898876553467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~lE~~LA~~~g~e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~ 160 (383)
T d1bs0a_ 81 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARL 160 (383)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEECCHHHHHHHHH
T ss_conf 40689999999987519983588604422467778760699866885045528776342357875257340578899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~~~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~ 240 (383)
T d1bs0a_ 161 LASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS 240 (383)
T ss_dssp HHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC
T ss_pred HCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 41457774499965787877723315679999886491998303123210377664558771774211245212233465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Gg~v~~~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~~s~Ii 320 (383)
T d1bs0a_ 241 GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQ 320 (383)
T ss_dssp CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSSBC
T ss_pred CCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 54200321677899860446664244320689999999999985025788888888899998788755986579998879
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~v~~g~~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~g 383 (383)
T d1bs0a_ 321 PLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG 383 (383)
T ss_dssp CEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 999799999999999999789149897489789998459998677799999999999998649
|
| >d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylosinus trichosporium [TaxId: 426]
Probab=100.00 E-value=0 Score=28876.73 Aligned_cols=1 Identities=0% Similarity=-1.325 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~r~~~~f~~p~~rr~seYE~vt~~~Qp~p~~~~~~~~~~~W~~~f~~G~~~y~~~~ 80 (383)
T d1mhyb_ 1 KRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKPLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNES 80 (383)
T ss_dssp CCTTTCHHHHHHHHHHSCSSCSCCCCSTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 99999745888998616788666677656657868789554444202677985651355654783042079999987553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Tai~~~DW~afrDP~q~~yr~Yv~~qaeqe~~v~~~~d~~~~~~~~~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a~i~ 160 (383)
T d1mhyb_ 81 TELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVG 160 (383)
T ss_dssp CSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 00143663654580088899999989999999999999999669620089999999999986131089999998889998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 r~a~~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~gf~~~~~~~k~~W~~dp~WQ~~R~~vE~~lva~~Dw~E~~vA 240 (383)
T d1mhyb_ 161 RDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWA 240 (383)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCGGGHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 64675899999999988788899999999999877468987056899889844886899999999887317659999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~NlV~e~ll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~R~~~w~~alvk~~l~~d~e~~~~Nr~~lq~Wi~~W~~~ 320 (383)
T d1mhyb_ 241 GHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLAS 320 (383)
T ss_dssp HHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98879986589999999999999759705699999999899999999999999998469522155899999999999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 a~~A~~~l~pi~~~~p~~~~~~~~~~~~~a~~rv~~~~~~~~a~~i~~~~~~~~~~~~~~~~~ 383 (383)
T d1mhyb_ 321 SVAALKDFVGLYAKVEKVAGATDSAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGY 383 (383)
T ss_dssp HHHHHHHHGGGGGGSCCCTTTTSHHHHHHHHHHHHHHHHHHTHHHHTCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 999999867876047754431105789999999999885433154176546999999986469
|
| >d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Ammonium transporter superfamily: Ammonium transporter family: Ammonium transporter domain: Ammonium transporter AmtB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28876.42 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~d~~d~~~~l~~~~lV~~m~~~Gf~lle~G~vr~kn~~~~~~k~~~~~~~~~i~~~~~Gy~lafg~~~~~~g~~~~~~ 80 (383)
T d1u7ga_ 1 AVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLASGEGNNFFGNINWLM 80 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCSSSCCCSTTGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHH
T ss_conf 97576459999999999999999999998611144889999999999999999886034867868489988677750542
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~fq~~Fa~~a~~IvsGavaeR~~~~~~~i~~~~~~~~vy~~~~hwvw~~g~l~~lG~~Dfa 160 (383)
T d1u7ga_ 81 LKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFPAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGALDFA 160 (383)
T ss_dssp GTTCCTTCEETTEEHHHHHHHHHHHHHHHHHHHHHHHGGGBCHHHHHHHHHHHHHHTHHHHHHHHHSSCHHHHHTCCCSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHEECCCCCCCCCCCEECC
T ss_conf 15765321222211567757633133310231103334665026753045676502156587420488753357863016
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Gs~vVH~~gG~~aL~~~~~lgpR~~~~~~~~~~~~~~~~~lG~~iLw~gW~gFN~gs~~~~~~~~~~~~~nt~~a~a~~~ 240 (383)
T d1u7ga_ 161 GGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAI 240 (383)
T ss_dssp CTTTTHHHHHHHHHHHHHHSCCCCCTTCSSCCGGGHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74366404209899888753875445656565678146667899999999873445435520588999998776788999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~k~~~~~~~nG~LaGLVaita~~~~v~p~~A~~iG~i~g~i~~~~~~~l~~~~~iDD~~~~~~vHg~~G 320 (383)
T d1u7ga_ 241 LGWIFGEWALRGLPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCG 320 (383)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHH
T ss_conf 99999998735987799999886545540246755346156899886210778899999986601366465670321368
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 i~G~l~~glfa~~~~~g~~~~~~~~~~~ql~~Ql~g~~v~~~~~~~~~~ii~~il~~~~gLRV 383 (383)
T d1u7ga_ 321 IVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRV 383 (383)
T ss_dssp HHHHHHHHHHTSGGGTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999988998267444665654541268999999999999999999999999999984728769
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28875.03 Aligned_cols=1 Identities=0% Similarity=-0.758 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~ 80 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEV 80 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECCCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHCCCCCEECCCC
T ss_conf 98998978899999999986899789993499874506688778982895776696798769999999859962222676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
T d2v5za1 81 ERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLA 160 (383)
T ss_dssp SEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 63477347643223444200011444554899999999866430011321013455544667999998704626778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~i~~~~~v~~I~~~~~~v 240 (383)
T d2v5za1 161 TLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENV 240 (383)
T ss_dssp HHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEEESCCEEEEECSSSSE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCEE
T ss_conf 87654220246302467889999886132212333246762133144154999999987598499368606899609969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~v~~~~g~~~~ad~vI~a~p~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~ 320 (383)
T d2v5za1 241 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 320 (383)
T ss_dssp EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHH
T ss_pred EEEECCCCEEECCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHH
T ss_conf 99988997898799998989899951824899999999999975447754401354408768668556653466775067
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ga~~~g~~~a~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~P~~p~~~~~i~~~~ 383 (383)
T d2v5za1 321 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCGGGSSCCCCCCSSSCCCCCCCCHHHHHCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 899987999999999862588044302484224655454545605224999987403167779
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28874.65 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~r~~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~ 80 (383)
T d1bo1a_ 1 KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGID 80 (383)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEEECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC
T ss_conf 94410238999999737988875228996000371003445897347777886779887079983799999999981989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~ 160 (383)
T d1bo1a_ 81 DQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDG 160 (383)
T ss_dssp HHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
T ss_conf 89999972788654345657767867880699689998579999999999899999998607875787634303787479
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~ 240 (383)
T d1bo1a_ 161 VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQ 240 (383)
T ss_dssp EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 52799998424567765103676158632567675334555204656778764688230799999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
T d1bo1a_ 241 LKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKS 320 (383)
T ss_dssp HTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC-----------------------------------CCSCCTTTSTTE
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78675043675512211112211001124555444555564322345789788302221553346644577765445445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~~IS~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 321 HESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp EECSSTTEEEEEEECCSCC------------------CCCSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 678997599999999715779689999999999211889896127989999999999998649
|
| >d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Pigment epithelium-derived factor, PEDF species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28873.49 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~L~~~l~~~~~~~Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~ 80 (383)
T d1imva_ 1 TGALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISS 80 (383)
T ss_dssp CCCCCCCCSHHHHSHHHHHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
T ss_conf 99866554754458289999999999999999985129698199888999999999998647399999999738999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~l~~~n~i~v~~~~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~ 160 (383)
T d1imva_ 81 PDIHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARS 160 (383)
T ss_dssp SCHHHHHHHHHHHHTSTTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECCSCHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999998750067763677877886168741668888887623764664354479999999999985075620364
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~t~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vv~lp~~~~~sm~ 240 (383)
T d1imva_ 161 TKEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSII 240 (383)
T ss_dssp CSCCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEE
T ss_pred CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 33438665124311104423202556533454464234798479830211245514566516655389994137973899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 iiLP~~~~~~l~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dL~~~L~~lGl~~~F~~adfs~is~~~l~vs~ 320 (383)
T d1imva_ 241 FFLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFDSPDFSKITGKPIKLTQ 320 (383)
T ss_dssp EEEESSCCSCCHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHTTTTTHHHHSCCCTTTCSSCCCEEE
T ss_pred EEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECEEEEEEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEE
T ss_conf 99962667886787664068899998750642279995021887540246675431343330345674556799947445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 v~hka~ieVdE~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P~~~ 383 (383)
T d1imva_ 321 VEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGP 383 (383)
T ss_dssp EEEEEEEEECSCEEECC--------CCCCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred EEEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 789999999888611132222101567899679911999999999999968999995289997
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28869.75 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~P~GL~N~GNtCY~NSvLQ~L~~ip~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~p~~~~~~l~ 80 (383)
T d2ayna1 1 MELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 80 (383)
T ss_dssp CCCCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHCSEECCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 98995858898406999999999766999999985145315777645277999999999999865898457799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~QqDa~Ef~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~~~~~c~~c 160 (383)
T d2ayna1 81 MAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTES 160 (383)
T ss_dssp HHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------CCHHHHHTCEEEEEEEEESSS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCC
T ss_conf 97376502555672245439999998788999998753203644211101211124667872054022899988883578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~l~L~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~ 240 (383)
T d2ayna1 161 EEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 240 (383)
T ss_dssp CCCCCBCCEEEESSEEEECSSSCCBHHHHHHHTTEECCCCEETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSC
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCCCE
T ss_conf 96551002231323210221010013456665201100124532376401202346502341453410220120567621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~K~~~~v~fp~~ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L 320 (383)
T d2ayna1 241 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDL 320 (383)
T ss_dssp CBCCCCCBCCSEEECGGGBCHHHHHHTTTTTGGGTCTTC----------------------CCCCCSCTTTTCCCSEEEE
T ss_pred EECCCEECCCCEEECHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 33584774687664432146033013321024554432211013667554434542222236533344446789951999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~avi~H~G~s~~~GHY~a~vk~~~~~W~~~nD~~V~~v~~~~v~~~~~~~~~~~aYiLfY~r~ 383 (383)
T d2ayna1 321 QAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 383 (383)
T ss_dssp EEEEEEESSSTTSSEEEEEEEEETTEEEEEBTTBCCCBCHHHHGGGGSSSSSCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEECHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 999999789999977089999999928999899508937999977527998893699999879
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=28868.89 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
T ss_conf 96979995787689999999999828998999826876555300133566677776541133332235541799784568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78866666224012043232443222223222233134554442232001110477533333332222334433222222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 22123357899988886676799999999998599779971230515676666555666510027999999986103454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred CCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEHHHHHHH
T ss_conf 20123333037835873785546899747856888999999999986402221111346753899689996359999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------6
Q 001706 633 --------------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~~ 383 (383)
T d1gy8a_ 321 ARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA 383 (383)
T ss_dssp HHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC
T ss_pred HHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999869997648899999986785357899999879966787999999999999986800489
|
| >d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative methionine aminotransferase YdbL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28794.60 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~ 80 (382)
T d1u08a_ 1 PLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLY 80 (382)
T ss_dssp CCCCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98824547799986999999996269978854988999778999999999985599889898677999999999999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (382)
T d1u08a_ 81 GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERT 160 (382)
T ss_dssp SCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTE
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99988772378646358889998751035640599731443213455443133200012214335689999731213574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~R 240 (382)
T d1u08a_ 161 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWK 240 (382)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGC
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 08998798765454565332012332210243202430320210343345542000123468579985035521478665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 iG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~ 320 (382)
T d1u08a_ 241 VGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLV 320 (382)
T ss_dssp CEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEE
T ss_pred CHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEE
T ss_conf 11010210137888752022323456433322333222206777789999876300002232037857956894679989
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~l 382 (382)
T d1u08a_ 321 DYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 382 (382)
T ss_dssp ECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTTC
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 56888999999999999997999998224527899989889999809999999999998179
|
| >d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28796.41 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~l~~PGP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~ 80 (382)
T d2bkwa1 1 KSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS 80 (382)
T ss_dssp CCCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98656427899788799999727326897769999999999999999985334898719999386899999999998876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~ 160 (382)
T d2bkwa1 81 KAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQA 160 (382)
T ss_dssp TCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHH
T ss_pred CCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHH
T ss_conf 07998248997312334434311100133333223677775641579998630110100232112246302441233332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (382)
T d2bkwa1 161 IKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT 240 (382)
T ss_dssp HHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 01334310256302455322123233557569950566667689750255405999864331035888663011122100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~ 320 (382)
T d2bkwa1 241 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVY 320 (382)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEE
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEC
T ss_conf 23311345556535677577789999999999876324557999999999999764115532234683011587379970
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~~ 382 (382)
T d2bkwa1 321 VADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 382 (382)
T ss_dssp CSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHHCCEEEECCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89989999999978939977877311699899858868997999999999999999997739
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=0 Score=28794.01 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (382)
T d1wkva1 1 ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGE 80 (382)
T ss_dssp CEEEGGGGTTHHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTT
T ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCC
T ss_conf 96421015677775324278999999986035030579975478999999844553556776531166526210489854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~l~~~~~~~PTPLvrl~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA 160 (382)
T d1wkva1 81 MVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALS 160 (382)
T ss_dssp CEESSHHHHHHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTTCEEEEECCHHHHHHHH
T ss_pred EEECCHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 67579899856899998777877888898999985478999876299999999999985268999999858759999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~~~~~~~q~~N~~~~~~h~~ttg~E 240 (382)
T d1wkva1 161 AVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTARE 240 (382)
T ss_dssp HHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCHHH
T ss_conf 99998499779996200112222222356861154375105679999876520245754332345430232112112178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 I~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep~~~~~i~g~~~i~~g~~~~~~~d~~~~i~~Vsd~ 320 (382)
T d1wkva1 241 IFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLE 320 (382)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHHHSCCCCEEEEECHH
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
T ss_conf 99996467873167897416654233320101231876623675244444445641024576575646644299997999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 Eai~a~r~La~~EGI~vgpSSGaavaaa~k~a~~~~~~~~~vVvIlcD~G~rYlstiyN~~~ 382 (382)
T d1wkva1 321 EAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 382 (382)
T ss_dssp HHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
T ss_conf 99999999999819888189999999999998640689998999988897432676426789
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=100.00 E-value=0 Score=28793.97 Aligned_cols=1 Identities=0% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~p~W~~~~v~Y~i~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~ 80 (382)
T d1ea9c3 1 FQPPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNH 80 (382)
T ss_dssp CCCCTHHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSS
T ss_pred CCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 97986023886999971220379988786676434555777676678189999985699986799889969770178877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1ea9c3 81 KYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIP 160 (382)
T ss_dssp TTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87754453544366777899999999986264378763013441348325556406876544430013464432235763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~~~e~~~~~~~ 240 (382)
T d1ea9c3 161 TYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESSI 240 (382)
T ss_dssp SBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 22233344345742301388999999987515653146678743620076566545666554008981588543145532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~ 320 (382)
T d1ea9c3 241 WLEGDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVL 320 (382)
T ss_dssp TTTTTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 13676432212343004667655046421567899999999854020654405520367666312246787999999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~l~~pG~P~Iy~G~E~g~~~~~~~~~r~~~~w~~~~~~~~l~~~~~~L~~lR~~~paL~~G 382 (382)
T d1ea9c3 321 FQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRTG 382 (382)
T ss_dssp HHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHHHC
T ss_pred HHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCC
T ss_conf 99971798787755754888999977648878877765389999999999999568975189
|
| >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28793.32 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 80 (382)
T d1b5pa_ 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEK 80 (382)
T ss_dssp CCCCCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93788999848988899999999999967998289999989999889999999999865886899987889999999764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (382)
T d1b5pa_ 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRA 160 (382)
T ss_dssp HHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTT
T ss_pred HHHHCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 44303411265534056778999999999967997989987998477999999845847998554101458999999973
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 240 (382)
T d1b5pa_ 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG 240 (382)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG
T ss_pred CCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCHHHCCCCCEEEEECCHHHCCCCH
T ss_conf 78897699989997976600799999999999998590899976641232178988887818997799946346451807
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lR~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg 320 (382)
T d1b5pa_ 241 WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGA 320 (382)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBT
T ss_pred HHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
T ss_conf 56699998999999999998750357653222222222233121157899999999862267898876449767568941
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~~~L 382 (382)
T d1b5pa_ 321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382 (382)
T ss_dssp TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 79968578999999999999997897999572258999699997499999999999999869
|
| >d1xl7a1 c.43.1.3 (A:11-392) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Peroxisomal carnitine O-octanoyltransferase, COT species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=28799.31 Aligned_cols=1 Identities=100% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 e~Tf~~q~~LP~LPvP~Le~Tl~ryL~s~~pl~~~~e~~~t~~~v~~F~~~~G~~Lq~~L~e~a~~~~NWl~~~W~~~~Y 80 (382)
T d1xl7a1 1 ERTFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWLEEWWLNVAY 80 (382)
T ss_dssp CCTTTTGGGCCCCCCCCHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSSHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 96431427799898999899999999986566999999999999999974939999999998740698850587867753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 L~~R~pl~~~~n~~~~~~~~~~~~~~~~~~q~~raA~l~~~~~~f~~~l~~~~l~~~~~~~~plcm~qy~~lF~t~RiPg 160 (382)
T d1xl7a1 81 LDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQLLRREKLPVHKSGNTPLDMNQFRMLFSTCKVPG 160 (382)
T ss_dssp TSCCSCHHHHTCEEEECGGGGTTCCCCTTCHHHHHHHHHHHHHHHHHHHHTTCSCCCEETTEECCCGGGGGTSSEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHCCCEECCC
T ss_conf 25577864555666766556777885500699999999999999998740365471230998760799997612771689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~D~~~~~~~~~~~~~~~~HIvVl~~g~~ykv~v~~~~~~~s~~el~~~l~~I~~~~~~~~~~~~vg~LTt~~Rd~WA~ 240 (382)
T d1xl7a1 161 ITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERTRWAK 240 (382)
T ss_dssp SSCCEEEECCCCTTTCCCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHHTSCCCCCGGGGGGSCHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98772002355556789886699997893089999329908889999999999997354678887755067656479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~R~~L~~~~~~N~~~L~~Ie~AlfvvcLD~~~~~~~~e~~~~~~~~~l~G~~~NRW~DKs~q~IV~~nG~~G~~~EHS~~ 320 (382)
T d1xl7a1 241 AREYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCDHAPY 320 (382)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSSCEEEECCCCCCCCSSCCHHHHHHHHSSCGGGCCTTBSCEEEECTTSCEEEEECSSSC
T ss_pred HHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
T ss_conf 99997617842699999987446888613568889858999999963859873327766713899689888987368716
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 DG~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~A~~~~~k~as 382 (382)
T d1xl7a1 321 DAMVMVNIAHYVDERVLETEGRWKGSEKVRDIPLPEELVFTVDEKILNDVSQAKAQHLKAAS 382 (382)
T ss_dssp CTHHHHHHHHHHHHHHHHTTTCCCSCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 69999999999999976127878888887789997577896698999999999999998509
|
| >d1t1ua1 c.43.1.3 (A:20-401) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Choline O-acetyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=28794.84 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 e~~LP~LPvP~L~~Tl~ryL~s~~Pl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~~R 80 (382)
T d1t1ua1 1 ELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNR 80 (382)
T ss_dssp CTTSCCCCCCCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTTCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
T ss_conf 99998899999999999999985445999999999999999751698179999999987446878607778765016788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~pL~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~~~~~plcM~qy~~lF~t~RiP~~~~ 160 (382)
T d1t1ua1 81 LALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQ 160 (382)
T ss_dssp SCHHHHTCCEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTSSSCCSSSCCCCTTGGGTTTEEEECCSSS
T ss_pred CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCEECCCCCC
T ss_conf 78650056612105666876037999999999999999999756656861210224898667899998728670568998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 D~l~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~~~~l~~~ei~~~l~~I~~~~~~~~~~~~~ig~LT~~~Rd~Wa~~r~~ 240 (382)
T d1t1ua1 161 DTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTV 240 (382)
T ss_dssp CEEEECCCSSSSCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHTCSTTCCCCGGGGGGSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCEEEEEECCEEEEEEEEECCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74665576778898779999899899999998990688999999999999624455556888450555871999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 L~~~~~N~~~L~~Ie~alfvv~LDd~~~~~~~e~~~~~~~l~g~~~~~~~~NRW~DKslq~IV~~nG~~g~~~EHS~~DG 320 (382)
T d1t1ua1 241 LLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDG 320 (382)
T ss_dssp HTTSHHHHHHHHHHHTCSCEEEECCCCSSCCCHHHHHHHHHHTTSTTTTTTSCCTTBSEEEEECTTSCEEEEECSTTCCH
T ss_pred HHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCH
T ss_conf 85596158999999866489992799988701689999986178778998610677873799978986898504676249
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~dl 382 (382)
T d1t1ua1 321 IVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNL 382 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCSSSCSCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998640677888887778999658788658899999999999999997349
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=100.00 E-value=0 Score=28794.52 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~P~w~~~~viY~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~ 80 (382)
T d1wzla3 1 VFTTPEWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPS 80 (382)
T ss_dssp SCCCCSGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 97998420288799997024137998778766643344566655777785899999831999977997899798677875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1wzla3 81 HHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45776556320236788788999999999752451576321013333333331001037654246643003654566789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1wzla3 161 TNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHDAS 240 (382)
T ss_dssp CSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 74444344556678507799999999999999999758875034334335645556789998752884478620035652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~a~ 320 (382)
T d1wzla3 241 GWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAV 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHH
T ss_conf 02203342023302677899986514764314678888753201643245663123058775536765389799999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~llt~pG~P~iy~G~E~g~~g~~~~~~r~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL~r 382 (382)
T d1wzla3 321 LFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASLTR 382 (382)
T ss_dssp HHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 99998089878973730277899995445788988655570899999999999830986488
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=28795.21 Aligned_cols=1 Identities=0% Similarity=-1.323 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~P~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~ 80 (382)
T d1j0ha3 1 DLFEAPDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPS 80 (382)
T ss_dssp GSCCCCGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 98899964107779999755312799887766665345557766766785899999867999976998899698876876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1j0ha3 81 NHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56877565643278879979999999986423643787752102333344312220368745557742224566545663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1j0ha3 161 PNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDAM 240 (382)
T ss_dssp CSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 23332356777764440769999999998886766441157984453216645534444433202898522343234512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~ 320 (382)
T d1j0ha3 241 PWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLF 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34213554410155310456654303543201221022210113654467662320467777741213488599999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------6
Q 001706 633 -------------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~lllt~pG~P~iy~G~E~G~~~~~~~~~r~~~~W~~~~~~~~l~~~~k~L~~lR~~~paL~r 382 (382)
T d1j0ha3 321 LFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSLRR 382 (382)
T ss_dssp HHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 99998179888986863286899880103577888654576999999999999842997586
|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=28722.06 Aligned_cols=1 Identities=100% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~~~~~~i 80 (381)
T d3bvua3 1 CQDVVQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHI 80 (381)
T ss_dssp CCCSSSCCCCCSEEHHHHHHHCCCCCCCCSSSTTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHHHTHHHH
T ss_pred CCHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 94366405766622687886521538999716677512205421476788379993877888002375999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~~l~~l~~~p~~~F~~~~~~~~~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~ 160 (381)
T d3bvua3 81 LSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLK 160 (381)
T ss_dssp HHHHHHHHHHCTTCCEEECCHHHHHHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999879997799835389999999749999999999998798799687121463457997999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~fG~~p~~~w~~D~FGhs~~lp~il~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~ 240 (381)
T d3bvua3 161 QFMNVTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYD 240 (381)
T ss_dssp HHHCCCCCEEEECSSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSS
T ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 97599973589638887657789999856988699974135542005201466504304666899880457516555668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~p~~~~~d~~~~~~f~f~~~~~~~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w 320 (381)
T d3bvua3 241 IPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEW 320 (381)
T ss_dssp GGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHH
T ss_conf 85567887211345442123455777876668766625589999999999999986216887389816668787761037
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~n~~kli~~iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~~ 381 (381)
T d3bvua3 321 DVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRS 381 (381)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSST
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 7888769999999971888881899889999999999987524778877678876788899
|
| >d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28721.64 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~l~~~~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l 80 (381)
T d1by7a_ 1 EDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGAAADKIHSSFRSLSSAI 80 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTCCG-GGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 90778999999999999873098985998789999999999986664999999997089987888999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~t 160 (381)
T d1by7a_ 81 NASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDT 160 (381)
T ss_dssp C------CEEEEEEEEEETTSCBCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSCTTSSCTTSCCTTC
T ss_pred HCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 56798847866000000368732889999999861773020443212599999999999975247754567855679731
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~~~~~~~~~~~~~~v~lp~~~~~~m~iilp~~~~~ 240 (381)
T d1by7a_ 161 RMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIAD 240 (381)
T ss_dssp CEEEEEEEEECCCBSSCCEECC---EEEEEETTEEEEECEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEESSCCS
T ss_pred HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 75611244774211578752356555333689805899516651555543136767499996147970799996277665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGi~~~F~~~~Adfs~is~~~~l~vs~i 320 (381)
T d1by7a_ 241 VSTGLELLESEITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERNDLFLSEV 320 (381)
T ss_dssp SSSSCHHHHHHCCHHHHHHHTSTTTEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTBSCSCCCCCEE
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEE
T ss_conf 35666776642258899987512114340489965648997550569999856851120445454445678898157667
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~q~~~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 381 (381)
T d1by7a_ 321 FHQAMVDVNEEGTEAAAGTGGVMTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP 381 (381)
T ss_dssp EEEEEEEECSCBC-----------------CCEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 8889999878842023133200003568999879933998999999999978999994398
|
| >d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystine C-S lyase C-des species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=0 Score=28716.64 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~fp~l~~~~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~ 80 (381)
T d1elua_ 1 QFPGLANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGC 80 (381)
T ss_dssp CCGGGTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH
T ss_conf 99878988895697636899999999999999865278765315679999999999999998397945199978858986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~ 160 (381)
T d1elua_ 81 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQ 160 (381)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCC
T ss_pred HHCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 21000233247853899546541132011122334542222322233333205899998640233222123333456531
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~~~~~ 240 (381)
T d1elua_ 161 VLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWR 240 (381)
T ss_dssp BCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 10035788987520345321022344334554442212222333333454422122305677741888986396100244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 320 (381)
T d1elua_ 241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA 320 (381)
T ss_dssp TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 54433333443344432222333223204555433001588744421101456667899998875089769647887653
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~edid~ll~~l~e~~~ 381 (381)
T d1elua_ 321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLADFGP 381 (381)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1899983898899999999996896898668999799955788999999999999996691
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=100.00 E-value=0 Score=28718.94 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 slVVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~ 80 (381)
T d2bo4a1 1 SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN 80 (381)
T ss_dssp CEEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf 98999727885889999999997589814999986999875999999852300113321001110023546578848899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g~y~R~~~~grvt~~l~~pll~~l~~~~~~~~i~d 160 (381)
T d2bo4a1 81 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ 160 (381)
T ss_dssp HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSC
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999997088888999758767677999999999876305758986314567882236755899999860201565054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~ 240 (381)
T d2bo4a1 161 PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ 240 (381)
T ss_dssp TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 77610104099999862434556567866244999999985974784478778777899999999999999987782363
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (381)
T d2bo4a1 241 HEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAAT 320 (381)
T ss_dssp TCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHGGGSCHHHHHHHHHTTTSCCCTTCCHHHHHHH
T ss_pred CEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 33322012022557445888888752047999999999755777999998569988888987444664778767999999
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T d2bo4a1 321 YHVLLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQQYLYRMLGRYRYQAALEN 381 (381)
T ss_dssp HHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999997301460688871056889999999999976079899999999877787876249
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=100.00 E-value=0 Score=28716.61 Aligned_cols=1 Identities=0% Similarity=0.703 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~~~lvd~~At~~tk~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~sdv~~~tG~yPAv~G~D~~~~~~~~~~ 80 (381)
T d1odza_ 1 VKPVTVKLVDSQATMETRSLFAFMQEQRRHSIMFGHQHETTQGLTITRTDGTQSDTFNAVGDFAAVYGWDTLSIVAPKAE 80 (381)
T ss_dssp CCCEECCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTCCSSCSCCSSSCCHHHHHHSSCCSEEEEEGGGTSTTCTT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCH
T ss_conf 98877620597779999999999998648966983355444564436665306667640377744201200135687321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~ 160 (381)
T d1odza_ 81 GDIVAQVKKAYARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGR 160 (381)
T ss_dssp CCCHHHHHHHHHTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 44999999999779959998730788987777641577643135667504899703699999999999999975540388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~vPVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG 240 (381)
T d1odza_ 161 LIPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLG 240 (381)
T ss_dssp BCCEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEEC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 76289964210479865667889998999999999999998715986189986478787776444201089988677888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~~l~~~~~~A~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~~~i~y~~~W~ 320 (381)
T d1odza_ 241 FDTYGPVADNADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDAREIAFLLVWR 320 (381)
T ss_dssp CEEEECSSSCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTGGGCSEEEECC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 63557888753589999999999999998559951663036667711026765426999999997282222443899985
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
-
T Consensus 321 N~~~~~~~~~~~~~~~~~~p~p~~~~~g~~~~~dF~~f~~~~~~lf~~dlp~ly~~p~~~~ 381 (381)
T d1odza_ 321 NAPQGVPGPNGTQVPHYWVPANRPENINNGTLEDFQAFYADEFTAFNRDIEQVYQRPTLIV 381 (381)
T ss_dssp CCTTCEEC--CCEECCCCSCCSSHHHHHTSHHHHHHHHHHSTTEECGGGCCSCSCCCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHCCCCCC
T ss_conf 6766556666677763336777634457642899999976960113444807551677779
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28715.18 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~e~p~~~tedfgFk~l~~~~~~~~~~d~lP~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~ 80 (381)
T d1xipa_ 1 ASSLKDEVPTETSEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTF 80 (381)
T ss_dssp CCEECCCCCEEEESSCEEEEEEEEECSCCCTTCCCSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCC
T ss_pred CCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCCC
T ss_conf 97546667816646530587166212789544589644426899577788999889977999989978786556788862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~ip~v~~vafs~d~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~ 160 (381)
T d1xipa_ 81 KWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQL 160 (381)
T ss_dssp SEEEECTTEEEEEEETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EECCCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 34168998689986189899995897899985100145446554556111021886069996589778999415864444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~~~~~~~ed~ 240 (381)
T d1xipa_ 161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDE 240 (381)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSS
T ss_pred CCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC
T ss_conf 47752387338926999968968999818982036567788201578867786166899951756999987776666767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~ii~~~~~~~~f~~~~Di~~pfgs~~R~p~y~~~~l~~w~~~~~~l~iv~Ss~s~di~vl~~~~~~~~~~D~~ 320 (381)
T d1xipa_ 241 VSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSE 320 (381)
T ss_dssp CCCCEEEEEEEEETTEEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEECSSSEEEESSGGG
T ss_pred CCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCC
T ss_conf 76433799982699983035256566776566667517999830056567868999556763456861367489812675
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 Ra~lP~~~~~d~Dt~piGlalD~ss~~~v~~p~~g~~~~~plP~l~vL~~~G~L~~ww~~~ 381 (381)
T d1xipa_ 321 RAVLPISEETDKDTNPIGVAVDVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFH 381 (381)
T ss_dssp CCBCCBCTTTCCBCCEEEEEEECSCCC--------------CCEEEEEETTSEEEEEEEEC
T ss_pred CEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEC
T ss_conf 3040357788876531589997124752315788822278998899996987899999879
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=100.00 E-value=0 Score=28714.24 Aligned_cols=1 Identities=0% Similarity=-1.292 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~p~~~~~~~~~~~~~~~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~ 80 (381)
T d1mpxa2 1 TSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAG 80 (381)
T ss_dssp CCTTSCSSCSSCCCCCCTTCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98989999998777776555866988999899998999999996899973089997567789765656665444320068
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~ 160 (381)
T d1mpxa2 81 DDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMA 160 (381)
T ss_dssp GHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 99999689799998137657889853315201210132006789999999998753588576504560365778889888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~~~~l~a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (381)
T d1mpxa2 161 LTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLE 240 (381)
T ss_dssp HTSCCTTEEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGG
T ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
T ss_conf 75356521043232454252010243468335322289998642110366112110135677787525654424023144
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGPw~H~~~ 320 (381)
T d1mpxa2 241 QLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQV 320 (381)
T ss_dssp GSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGG
T ss_pred CCHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 46177887527875301232690266652345674389842555775653899999999842666783699936767787
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg~~~~~~~ppV~~~~~G~~~Wr~~~~W 381 (381)
T d1mpxa2 321 NYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRLKAW 381 (381)
T ss_dssp GSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 6677767766665101134689999999999727999999999889997899968407979
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=100.00 E-value=0 Score=28714.47 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2guya2 1 ATPADWRSQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYH 80 (381)
T ss_dssp CCHHHHTTCCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTT
T ss_pred CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99702147829999755211799988877787667647848999999699998779998996988778766688899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2guya2 81 GYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQ 160 (381)
T ss_dssp SCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 75046646655677877899999989886063213100124666545765222334689875431001344445444554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2guya2 161 VEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAGVYCIGEVLDGDPAYTC 240 (381)
T ss_dssp HHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCEEEEEEECCCCCHHHHC
T ss_conf 32023257765510103355889999998765103113555103403754589999764321402563110364075540
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~enHD~~R~~s~~~~~~~~~~a~~~l~t 320 (381)
T d2guya2 241 PYQNVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPRFASYTNDIALAKNVAAFIIL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHSSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 23324444224066799999996267761778999998874067643000101676752210225889999999999998
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~pGiP~iy~G~E~g~~g~~~~~~r~~~~~~~~~~~~~l~~~i~~L~~lR~~~~~~~~~~~~ 381 (381)
T d2guya2 321 NDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381 (381)
T ss_dssp SSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 0897298736002757998811001466556767879999999999997488641699879
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=100.00 E-value=0 Score=28714.00 Aligned_cols=1 Identities=0% Similarity=1.433 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gG~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2aaaa2 1 LSAASWRTQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYH 80 (381)
T ss_dssp CCHHHHTTCCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTT
T ss_pred CCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98034488727999838106899998877777767758938999999799999769998994987668765788998875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2aaaa2 81 GYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTM 160 (381)
T ss_dssp SCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56646543311024988999999998866311110023445433456776555333587554345588766456445555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2aaaa2 161 VEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKASGVYCVGEIDNGNPASDC 240 (381)
T ss_dssp HHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 67775678666675313233255667766644204221322000001233307899998744532233530379813321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~a~a~llt 320 (381)
T d2aaaa2 241 PYQKVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPTLLGNFIENHDNPRFAKYTSDYSQAKNVLSYIFL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHCSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 11344333002157899999985487307899999974331157721103435667721041246989999999999997
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~pG~P~iy~G~E~g~~g~~~p~~r~~~~~~~~~~~~~l~~~i~~L~~lRk~~~al~~~~~~ 381 (381)
T d2aaaa2 321 SDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYIT 381 (381)
T ss_dssp SSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
T ss_conf 0797675747214878998834111367677746769999999999997049453279879
|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Probab=100.00 E-value=0 Score=28714.56 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~pi~~~~~~~~Y~~~i~iGtpliiDTGSs~~Wvpc~~c~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~ 80 (381)
T d1t6ex_ 1 LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPC 80 (381)
T ss_dssp CCEEEEEEECTTTCCEEEEEETTEEEEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBC
T ss_pred CCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98798112269988599999769866998998811460678877766562780264235757888887666678778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~~~~~~ 160 (381)
T d1t6ex_ 81 TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKV 160 (381)
T ss_dssp EECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTC
T ss_pred CEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
T ss_conf 60677838998888799999999653223552025885112202435665444667630210588873157887651376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~i~DTGtt~ 240 (381)
T d1t6ex_ 161 ANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPY 240 (381)
T ss_dssp CSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSS
T ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCE
T ss_conf 44899554777654237603656633357833777654157874257888778518846615755456763687427734
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~~~~~i~~~~y~~~ 320 (381)
T d1t6ex_ 241 VLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVD 320 (381)
T ss_dssp EEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEE
T ss_pred EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHEEEE
T ss_conf 97778999999999988751445664211101466677522622565555565431461799975996799770473899
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------6
Q 001706 633 ------------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~~~~~~~~ 381 (381)
T d1t6ex_ 321 VKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp EETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred ECCCCEEEEEEECCCCCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 0798489999832556677888973898979848689999899999999877888887688
|
| >d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=28647.65 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~f~~~~~~~~~~~~~lvGGK~AnLgel~~~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~ 80 (380)
T d1vbga3 1 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMG 80 (380)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98899879986568814475072889989999978599999888549999999980764658799999999987787633
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~~~ 160 (380)
T d1vbga3 81 ATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEH 160 (380)
T ss_dssp CBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
T ss_conf 22356421011001232034566767787751352488998863231101766555553101100034024567788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~Glg~~v 240 (380)
T d1vbga3 161 MKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVNV 240 (380)
T ss_dssp HHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEEE
T ss_pred HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 88762304543136987566788998876650487422226888887654212102477100156502641330124245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~La~l~~~iE~~yg~P 320 (380)
T d1vbga3 241 QCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKEM 320 (380)
T ss_dssp EECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCCCEETHHHHHHCHHHHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 56663388737667613443444675213322112555545300044366531022238899999999999999981985
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
+
T Consensus 321 qDIEWA~~dg~L~ILQaRPv~~~~~aa~~~~~d~~~~~~i~~~~~~~~~~p~~~~~~l~~ 380 (380)
T d1vbga3 321 QDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHP 380 (380)
T ss_dssp EEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHGGGSCHHHHHHTTSC
T ss_pred CEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCC
T ss_conf 105999989989999744787557879999999988599688999873898577461399
|
| >d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28646.83 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~t~~~h~~~~~dp~ga~~~PI~~sstf~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LE~~~~a~~fsSGMaAisal 80 (380)
T d1ibja_ 1 ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 80 (380)
T ss_dssp CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
T ss_conf 97767624279999999896188557766461887766895140898868999999999971986188603199999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~ 160 (380)
T d1ibja_ 81 THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 160 (380)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 98627998799974033554012222110454212235751678877775067618996142443223445899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rg 240 (380)
T d1ibja_ 161 AQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 240 (380)
T ss_dssp TTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf 75980896243004300255455898999606520256667554433344126777787630466773787779999842
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~~a~~f~d~l~l~~~a~ 320 (380)
T d1ibja_ 241 IKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAV 320 (380)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 31445538889888899999997389866996056456864211222456542111111127999999998389175741
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
-
T Consensus 321 SlG~~~SLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlE~~eDLi~Dl~qAl~~l~~ 380 (380)
T d1ibja_ 321 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 380 (380)
T ss_dssp CCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 568766130485223012089999997697939599983409999999999999976689
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=28644.15 Aligned_cols=1 Identities=100% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~e~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k~~~G 80 (380)
T d2gmha1 1 CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSG 80 (380)
T ss_dssp CCSCCCCCCTTTSCTTSCGGGSSCCCCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 98885335642245335754444574201363888998977899999999985213413999799981788899874535
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gvl~~~~l~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ae~~g~~~~~ 160 (380)
T d2gmha1 81 ACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYP 160 (380)
T ss_dssp CEECTHHHHHHCTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCHHHHHHHCCCHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 16668899987630344355301320012279963366466545670110245551320467888999987631543443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~G~l~k~li~~~~l~~~~~~~~G~~sip 240 (380)
T d2gmha1 161 GYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQGGFQSIP 240 (380)
T ss_dssp TCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCGGGGCC
T ss_pred ECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 01001344225773110122332323334556555643003463799956178866288876542103665545666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~l~~~G~lLVGDAAG~vnP~~g~GI~~Am~SG~lAAeai~~al~~~~~~~~~~~~~~~~y~~~~~~s~~~~eL~~~rn~~ 320 (380)
T d2gmha1 241 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIR 320 (380)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTT
T ss_pred CCCCCCEEEEECCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 34069806873354313512148753220237889999999997188643103444556889987628999999863877
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~g~~~g~~~~~~~~~~~~g~~p~tl~~~~~d~~~l~~~~~~~~i~y~~~d~~~~ 380 (380)
T d2gmha1 321 PSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQIS 380 (380)
T ss_dssp GGGGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSS
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 898752108999999999999857898701789997889988798589998999989169
|
| >d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]
Probab=100.00 E-value=0 Score=28644.19 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~LF~P~~ig~~~lkNRiv~~pm~~~~~~~G~p~~~~~~~y~~rA~Ggglii~~~~~V~~~~~~~~~~~~~~~d~~i~ 80 (380)
T d1q45a_ 1 SNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVE 80 (380)
T ss_dssp CCCCTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHTCCTTCEEEEEEEESSTTCCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 98635898118999856875884438883889979999999999998497799974508877757899986217779988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~k~l~~~vh~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~ 160 (380)
T d1q45a_ 81 AWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVED 160 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGSGGGCCCEESSSCCCCTTTCCEECTTSCEECCCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHH
T ss_conf 99999999873576258875307866665545567787666557666677224267755568998843787889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 f~~aA~~A~~aGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~lEii~aIr~~vg~~~~~~~~~~~~d~~~ 240 (380)
T d1q45a_ 161 YCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLD 240 (380)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 99999999982865366000211367654165335576655764231036677779988887015672278752022366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pv~~~Gg~~~~~ 320 (380)
T d1q45a_ 241 ATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKEL 320 (380)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTSSCCSEEEEECCC---------------CHHHHHHHHHHHHSCSCEEEESSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHH
T ss_conf 42133123333210256676653135632477416754433334566567625667889988652488589679989999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ae~~l~~G~~DlV~~gR~liaDPdlv~K~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (380)
T d1q45a_ 321 GMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFLAP 380 (380)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSCCCSSTTTTCSCCCCC
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999998699632455299887924999996299988887466458999898577789897
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=28642.05 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s~ltv~~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl 80 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDM 80 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHHHHHHHHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHH
T ss_pred CCEEEEECCCEEECCEEECCHHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHH
T ss_conf 96699937807982433203676658887612011256404533765510043311133053246676662688806999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~ 160 (380)
T d1qyia_ 81 LFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160 (380)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCC
T ss_conf 99999999998774348985778987775436408999875365556775148888765324553144755521376528
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~ 240 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGR 240 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 75888999986899999999999877220223345533156675423013565334363999999999879959998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~ 320 (380)
T d1qyia_ 241 PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320 (380)
T ss_dssp CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEE
T ss_pred CHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999998199534785058744133311220331102369986999999998088778899999973899886999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~~~ 380 (380)
T d1qyia_ 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLEHH 380 (380)
T ss_dssp EESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTTTC
T ss_pred ECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
T ss_conf 889989999999879988999458888643778976799999889999999999998509
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=0 Score=28641.08 Aligned_cols=1 Identities=0% Similarity=1.134 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~g~nlgn~lda~~~~~~~~~~~~e~~Wgnp~~t~~~i~~ik~~Gfn~vRi 80 (380)
T d1edga_ 1 MYDASLIPNLQIPQKNIPNNDGMNFVKGLRLGWNLGNTFDAFNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRI 80 (380)
T ss_dssp CCCGGGSCCCCCCCCCCCCSHHHHHHHHHCSEEECTTSTTCCCCSSCCSGGGHHHHTTCSCCCHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 95434576564465566888789999864784623867036887656678987776699616699999999869987997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Pv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~~~~~~~~~~~W~qiA~~fkd~~ 160 (380)
T d1edga_ 81 PVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYD 160 (380)
T ss_dssp CCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 34078826899885298999999999999997699799845667887766678656757799999999999887606898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~ 240 (380)
T d1edga_ 161 EHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPN 240 (380)
T ss_dssp TTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCC
T ss_conf 66999621344446786544532223108999999999999999999984457886089857886477543000111554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~giPviiGEfG~~~~~~~~~r~ 320 (380)
T d1edga_ 241 DISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRV 320 (380)
T ss_dssp CCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf 45677887799975157643566667767877655576113899999999999988754962999623376789858999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~a~~~gi~~~~Wdn~~~~~~~~~fg~~dr~~~~w~~p~~~~~~~~~~~g~~~ 380 (380)
T d1edga_ 321 EYMSYYVAQAKARGILCILWDNNNFSGTGELFGFFDRRSCQFKFPEIIDGMVKYAFGLIN 380 (380)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCCSSSSCCCCCEETTTTEESSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999999998699279987998888866745153788865889999999998648999
|
| >d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=28639.47 Aligned_cols=1 Identities=0% Similarity=0.901 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~ 80 (380)
T d1elja_ 1 MKIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLE 80 (380)
T ss_dssp CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBC
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCC
T ss_conf 98766389999589803899999999999987839799998689999999999976999819999937799999879963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~~P~T~~e~~~~~~~l~~~~~~~~~~~~~~~~ 160 (380)
T d1elja_ 81 PIDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSEPPKTFDEMKAIMEKYYDPANEKYGIAWPINA 160 (380)
T ss_dssp CCTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSSCCSSHHHHHHHHHHHCBGGGTBCSCBCCCSH
T ss_pred CCCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 08665400221112166664103454301122222103566666676421332899999999986044771454311454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (380)
T d1elja_ 161 YFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKAGI 240 (380)
T ss_dssp HHHHHHHTTTSCCSEETTTTEECTTSHHHHHHHHHHHHHTGGGSCSCCCHHHHHHHHHTTSSSEEEECGGGHHHHHHTTC
T ss_pred CCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 32201120478500033454467798899999999987443233545750465666405761155244288999875430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~~l~s~e~~~~~~~~~~g~~P~~~~~~~~~~~~~~~ 320 (380)
T d1elja_ 241 NFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKNDP 320 (380)
T ss_dssp CEEEECCCCEEETTEEECCCCEEEEEEEEEBTTCSCHHHHHHHHHHHHHCHHHHHHHHHHHCCBCCBGGGGGCHHHHTCH
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHCCH
T ss_conf 26644458878776666652211000011244674599999999986326999999998348888777788598755193
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------6
Q 001706 633 -----------------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~g~~~~d~~~al~~~~~~i~~~~k 380 (380)
T d1elja_ 321 VIYGFGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADIEGILKKYQQEILNNMQ 380 (380)
T ss_dssp HHHHHHHHHHTCEECCCCTTHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 899999999518207889878999999999999997789992099999999999999529
|
| >d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28567.18 Aligned_cols=1 Identities=0% Similarity=1.168 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~F~~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~ 80 (379)
T d1lj5a_ 1 VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK 80 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98976888888849999999998723969869987899999999999867728999999970999873778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~ 160 (379)
T d1lj5a_ 81 ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL 160 (379)
T ss_dssp HHHCGGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHHHHTTTTSCCCSSCTTSSCTT
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 86175554520024478773567245788998787636600135555268999999999996049932331376678965
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 t~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~~M~~~~~~~~~~~~~~~~~~~~vv~Lp~~~~~~sm~iilP 240 (379)
T d1lj5a_ 161 TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP 240 (379)
T ss_dssp CCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTSSEEEEEEEE
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
T ss_conf 40466721799511347677355533210346785576112354151205885036666058999603798478999647
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v 320 (379)
T d1lj5a_ 241 YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA 320 (379)
T ss_dssp SSTTSCTHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTCSSSCCCEEEE
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 76666367776530077788777634313308999999984100277878867972235765565223678898077656
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~hk~~iev~E~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 379 (379)
T d1lj5a_ 321 LQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP 379 (379)
T ss_dssp EEEEEEEECSSEEEEEEEEEEEESSCCCCCCCCBCCEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEEEECCCCEEECCCCEEEECCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCC
T ss_conf 88999998787145022322542268999879940998999999999968999995398
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=100.00 E-value=0 Score=28565.25 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 md~~yDviIVGsG~aG~v~A~~La~~G~kVlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (379)
T d2f5va1 1 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 80 (379)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHCGGGHHHHHHHTCEESCCCCCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99732589989688999999999658893999936899987522346222023346664445434566333566554555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~r~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T d2f5va1 81 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 160 (379)
T ss_dssp CCCSCTTSCCCSSCCCCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 66777777667876761688821214442454122303799846216683458988863012457776688686025564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 240 (379)
T d2f5va1 161 ESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVA 240 (379)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTSSCCEECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCEEECCCE
T ss_conf 44454899999877775277877553445656765444210047888788589886343310433776489999956999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 V~~i~~~~~~~r~~gV~~~d~~~g~~~~i~a~~vilaaGa~~tp~lL~~Sg~~~~~~~~~~~~~~~~~~~g~h~mG~~~~ 320 (379)
T d2f5va1 241 CERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPELLPSLGSHRMGFDEK 320 (379)
T ss_dssp EEEEEECTTSSCEEEEEEEETTTCCEEEEEEEEEEECSCHHHHHHHHHHTTSSCCSSCCTTSCCSSSTTTTBTCBCSCTT
T ss_pred EEEEEEECCCCEEEEEEEEECCCCEEEEEECEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 99999818999899999997999979999650899655766898997322002223345566753166545044566888
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~vvd~~~~v~g~~nlyv~d~sv~p~~~~~nPt~t~~alA~r~a~~i~~~~~~~~~~ 379 (379)
T d2f5va1 321 EDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT 379 (379)
T ss_dssp TTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCSHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88724788975213289797388556775656818889999999999999862458999
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=100.00 E-value=0 Score=28562.97 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgGkTWs~~ 80 (379)
T d3sila_ 1 EKSVVFKAEGEHFTDQKGNTIVGSGSGGTTKYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGGKTWNKK 80 (379)
T ss_dssp CEEEEECTTCCCCBCTTSCBCCCSBGGGBCCEEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSSSCCEEE
T ss_pred CCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 94089984775715889858996479986255746689997999599999667789887777519999913796589999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~i~~~~~~~~~~~~~~p~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~~~~ 160 (379)
T d3sila_ 81 IAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHD 160 (379)
T ss_dssp EEECCCCSCTTTCEEEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHH
T ss_pred EECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 88647998765243477647887899978999999735788875430135678774247887658610001467425321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~g~g~gi~~~~g~l~~p~~~~~~~~~~~~~~~~~~~sddgg~w~~~~~~~~~~~~E~~vve~dG~ll~ 240 (379)
T d3sila_ 161 IVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGFGSENNIIEFNASLVN 240 (379)
T ss_dssp HHHHHCSEEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESSSSSEECCSCCEECTTCCEEEEEETTEEEE
T ss_pred CCCCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEE
T ss_conf 12236530455057662476046534645898815899862799999857887533540356778877889864885799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~R~~g~~~v~~S~DgG~TWse~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~r~~~~~~~s~d~g~tW~~~ 320 (379)
T d3sila_ 241 NIRNSGLRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSAQNKNNDYTRSDISLYAHNLYSGE 320 (379)
T ss_dssp EECCSSBCBCEEESSSSSCCEECTTTTTCSBCCTTCCCCEEEEEEETTEEEEEEEEECCTTSSTTCCCEEEEEECTTTCC
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 98717966999986898623145665323221224321226883469919999889888888635899974688867788
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------6
Q 001706 633 ----------------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~aYS~l~~~~~~~~~~l~~lyE~~~~i~~~~lt~~l~~~~~~~ 379 (379)
T d3sila_ 321 VKLIDDFYPKVGNASGAGYSCLSYRKNVDKETLYVVYEANGSIEFQDLSRHLPVIKSYN 379 (379)
T ss_dssp EEEEEEEECSCCCTTSCCCEEEEEEEETTEEEEEEEEEETTEEEEEECGGGHHHHHTCC
T ss_pred CEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCC
T ss_conf 67995147501589970312248747989999999998999878369776477733479
|
| >d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]
Probab=100.00 E-value=0 Score=28490.55 Aligned_cols=1 Identities=0% Similarity=-2.420 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~LtfdDVllvP~~st~~sr~V~l~t~lt~~~~l~iPIIsApMdtVt~~~mA~als~~GGLGvLhr~~~ 80 (378)
T d1jr1a1 1 GLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCT 80 (378)
T ss_dssp CBCHHHHTSSCCCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHHTCEEEECCSSC
T ss_pred CCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 98978862568888844679847988776777562069887856899879799987388999999997899469769999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~e~~~~ev~~v~~~~~~p~~~~~~~~~l~v~aavg~~~~~~~~~~~l~~agv~vi~id~a~g~~~~~~~~i~~ik~~~~~ 160 (378)
T d1jr1a1 81 PEFQANEVRKVKKYEQYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPN 160 (378)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCBCTTSCBCCEEEECSSTHHHHHHHHHHHHTCCEEEECCSSCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999887641104327643335546789999956687789999999751555576403676202357999999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~iIaGnVaT~e~a~~L~~aGAD~VkVGiG~Gs~ctTr~~tGvG~pq~sai~~~~~~a~~~~vpIIADGGi~~~gdiakA 240 (378)
T d1jr1a1 161 LQVIGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKA 240 (378)
T ss_dssp CEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEE
T ss_conf 72530220129999999982999786033135444454222347665202567887511569853425333547732468
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 la~GAd~VMmGs~fAgt~EspG~~~~~~g~~~k~~~gm~S~~a~~~~~~~~~~~~~~~~~~~~~eG~~~~v~~~G~v~~~ 320 (378)
T d1jr1a1 241 LALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKF 320 (378)
T ss_dssp HHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSTTTC----------------CCCCCBCEEEEECCBCHHHH
T ss_pred EEEECCEEEECCEEEEEECCCCCCCEECCCEEEECCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHH
T ss_conf 88605435532321342004675231468332312431045554401320332103345644787317850368778999
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~l~gglrs~m~y~G~~~l~e~~~~~~~~~~~f~~~t~~~~~e~~~h~~~~~~~~~~ 378 (378)
T d1jr1a1 321 VPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 378 (378)
T ss_dssp HHHHHHHHHHHHHHTTCSBHHHHHHHHHHSCSCEEECCHHHHHHHSCCSCSCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC
T ss_conf 9999999888652657573999975333577269998845301257875541012339
|
| >d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Maspin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28489.19 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~l~~a~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~ 80 (378)
T d1xqga_ 1 QGSMDALQLANSAFAVDLFKQLSEKEPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDV 80 (378)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHSTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 97678999999999999999987229798499888999999999998677589999999708998689999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~y~~~v~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~~~~~~~~~~t 160 (378)
T d1xqga_ 81 NKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQT 160 (378)
T ss_dssp HHHTTTSSEEEEEEEEEETTSCCCHHHHHHTTTTTTTCEEEECHHHHHHHHHHHHHHHHHHHTTTSCSCCSCTTSCCTTC
T ss_pred HCCCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 45467725887312022034532488998766323654686432440567789999999984158715456898989875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~l~na~~f~~~W~~~F~~~~T~~~~F~~~~~~~~~v~mm~~~~~~~~~~~~~l~~~vv~Lp~~~~~~sm~iilP~~~~ 240 (378)
T d1xqga_ 161 KILVVNAAYFVGKWMKKFSESETKESPFRVNKTDTKPVQMMNMEATFSMGNIDSINSKIIELPFQNKHLSMFILLPKDVE 240 (378)
T ss_dssp CEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBGGGSSEEEEEEESSCC
T ss_pred EEEEEEEEEEEEEECCCCCCCCCEECCEECCCCCEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 17888875886002278755652215501289955764123101426422206777389995058995789999567665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~ 320 (378)
T d1xqga_ 241 DESTGLEKIEKQLNSESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKASLENLGLKHIFSEDTSDFSGMSETKGVALSN 320 (378)
T ss_dssp SSSSSCHHHHHSCSHHHHHHHTCGGGCEEEEEEEEEECEEEEEEECTHHHHHHHTCCGGGCTTTCCCTTTCSCSSCCEEE
T ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54433899998639889998743542534799998004899876255887775584000588877544577999923787
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------~ 633 (1024)
+
T Consensus 321 i~qk~~i~vdE~G~~a~~~t~~~~~~~~~~f~~drPFlf~I~d~~t~~~Lf~G~v~~P 378 (378)
T d1xqga_ 321 VIHKVSLEITEDGGDSIEVPGARILQHKDELNADHPFIYIIRHNKTRNIIFFGKFSSP 378 (378)
T ss_dssp EEEEEEEEECSCBCCCCCCTTTTTSSCCCCCBCCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 6889999990685521223244457999879814998999999999978999993499
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=100.00 E-value=0 Score=28485.17 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~i~~~f~W~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~df~~L 80 (378)
T d1jaea2 1 EKDANFASGRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDM 80 (378)
T ss_dssp CCCCCCCTTCEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
T ss_conf 99998879970699702574999999999999980998899092620678899877565678632268889999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 V~~aH~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~n 160 (378)
T d1jaea2 81 TRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGS 160 (378)
T ss_dssp HHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTS
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998567244564034421244677766555688744476788876556899886777875433100014567103389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 p~V~~~l~~~~~~w~e~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (378)
T d1jaea2 161 DYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFG 240 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSSSSCCGGGTTTSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCCCHHCCCCC
T ss_conf 99999999999999985778446531112578787777776543132112444555404532001553200110103665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~lA~af~lt~p~G~P 320 (378)
T d1jaea2 241 CVLEFQFGVSLGNAFQGGNQLKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKNPKPYKMAIAFMLAHPYGTT 320 (378)
T ss_dssp EEECHHHHHHHHHHHTTTSCGGGGGGCSGGGTCCCGGGEEECSCCTTHHHHSCTTCCCTTSHHHHHHHHHHHHHSCSSEE
T ss_pred HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 00021332014554305762999999855440378540457624678777588763456898999999999998579887
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------6
Q 001706 633 ---------------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~iy~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~~~ 378 (378)
T d1jaea2 321 RIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGFRNAVE 378 (378)
T ss_dssp EEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8982365577777898888987778875866787878889989999999999866479
|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Antarctic bacterium DS2-3R [TaxId: 56673]
Probab=100.00 E-value=0 Score=28416.16 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~GL~Gv~v~~s~IS~Idg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T d1a59a_ 1 EPTIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVK 80 (377)
T ss_dssp CCCCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHH
T ss_pred CCCCCCCCCCCEECEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99889888998466075727858998799958439998714999999999978989499999999999998337986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~l~~~p~~~~pm~~l~~~~s~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~r~~~g~~~~~p~~~~~~~~~~~~ 160 (377)
T d1a59a_ 81 GAIDLLSTACHPMDVARTAVSVLGANHARAQDSSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLW 160 (377)
T ss_dssp HHHTTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997302002113445555320344532344657777777777888899888877763268887789876256999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~l~~~Lvl~aDHg~n~StfaaR~vaSt~~d~~~~~~a~~~al~Gp~hGga~~~~~~~l~~i~~~~~~ 240 (377)
T d1a59a_ 161 MTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDE 240 (377)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 62123320888877677876542477676236666664258514467787877603420111278999999998621566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~v~~~l~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~k~l~pNvD~ 320 (377)
T d1a59a_ 241 SLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEAKQIKPNLDY 320 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHCCCBCTHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 50266777899999998667866466874445667406777767777665412206677899999999971799978176
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~l~~~lG~p~~~~~~lf~i~R~~G~~AH~~Eq~~~~~l~RP~~~Y~G~~~R~~p 377 (377)
T d1a59a_ 321 PAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVADNALIRPLSEYNGPEQRQVP 377 (377)
T ss_dssp HHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCCCCCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC
T ss_conf 999999996849667769999999999999999998579975746540389999897
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28414.53 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRL 80 (377)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 98469999970585999999999997189998799993798899999985168777535443889988999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (377)
T d1o6ca_ 81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLK 160 (377)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 56665336653676403454301566653114227999514565433234714554003565304886323466634433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (377)
T d1o6ca_ 161 ENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHL 240 (377)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC---
T ss_pred HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 03445427523420678888777777753334430578449998323101466337899998752123355653234552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~ 320 (377)
T d1o6ca_ 241 NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGT 320 (377)
T ss_dssp -CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CHHHHGGGGTCCEEEECSCCC---CTTTTSSEEECS
T ss_pred CCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHCCEEEECCC
T ss_conf 11321122101345651475132136889999864225641640467766665414898078875822000680598789
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~k~~~~~~~ 377 (377)
T d1o6ca_ 321 DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFT 377 (377)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSCSCCCCCCC
T ss_pred CHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999999999749687763065889898982999999999985083336878999
|
| >d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]
Probab=100.00 E-value=0 Score=28414.48 Aligned_cols=1 Identities=100% Similarity=1.267 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~l~~PGP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~ 80 (377)
T d1vjoa_ 1 ISINDNQRLQLEPLEVPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTA 80 (377)
T ss_dssp CCCCCTTCCCCCSCCCCCCEECSSSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf 96473003446799987266610899789999999757688897888999999999999999859999809998484899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~ 160 (377)
T d1vjoa_ 81 AMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQ 160 (377)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEEE
T ss_conf 99999984334344420242001344444454320311100135778743202456666057640345554202334630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1vjoa_ 161 PLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDM 240 (377)
T ss_dssp CCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCH
T ss_pred CHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEECC
T ss_conf 50554334552264389960002333321012456505640212440589779974132667765203589974011001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~ 320 (377)
T d1vjoa_ 241 NLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD 320 (377)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT
T ss_pred CHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCEEEEEECCC
T ss_conf 10110257653346530142022257777666533725787888887654566664168546068276097499998999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~ 377 (377)
T d1vjoa_ 321 GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 377 (377)
T ss_dssp TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 989999999998649999966862326998998267578999999999999999859
|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyl Hydrolase Family 88 domain: Unsaturated glucuronyl hydrolase species: Bacillus sp. GL1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=28412.01 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~g~~~~~~~~~Wt~Gf~~G~lwl~ye~Tgd~~~~~~a~~~~~~~~~~~~~ 80 (377)
T d2d5ja1 1 MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR 80 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEEEEESSSSSEEEESSCSSCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 94899999999999988855101797748998377408983376479999999999869999999999999999975224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~hd~Gf~~~~s~~~~y~~Tgd~~y~~~a~~~a~~L~~r~~~~~g~~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~ 160 (377)
T d2d5ja1 81 FENLDHHDIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWA 160 (377)
T ss_dssp TTTCSSSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCTTTTTEEEGGGGGGHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 45566347631257679999987299989999999999999831867785435787888777766055125429999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~tgd~~y~~~A~~h~~~~~~~l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~ 240 (377)
T d2d5ja1 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA 240 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCH
T ss_conf 88509876999999999999998268899748898865899862578888788773167632199999999999983881
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~a~~~a~~~l~~~~~dgi~~wd~~~p~~~~~~~DsSa~Ai~A~gll~L~~~~~~~~~~~~~Y~~~a~~i~~~l~~~ 320 (377)
T d2d5ja1 241 DLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDG 320 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCTTSCCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999738877885321566678999877326789999999999852577267999999999999999876
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~iygDYy~~Eal~r~~~~~~~~w~~~~~ 377 (377)
T d2d5ja1 321 YAERDDGEAEGFIRRGSYHVRGGISPDDYTIWGDYYYLEALLRLERGVTGYWYERGR 377 (377)
T ss_dssp TBCCCCSSCCCSBSCBCSBTTTTBSSSBCBHHHHHHHHHHHHHHHHCCCTTSSCTTC
T ss_pred HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 600689988844631635789999988673559999999999997388653745899
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=0 Score=28410.76 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~ 80 (377)
T d1k8qa_ 1 AFGKLHPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPN 80 (377)
T ss_dssp CCCBSSCCCGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
T ss_conf 97667789987677889999984998558999817999898998468888876689989089989996314677442752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~ 160 (377)
T d1k8qa_ 81 NSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGF 160 (377)
T ss_dssp TCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHH
T ss_pred CHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH
T ss_conf 06999999879989998089988888887778752220137799984341799999999972999879997332699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1k8qa_ 161 IAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNAL 240 (377)
T ss_dssp HHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99986323320004675214544444114678998750136666642000114046777765431022034667877655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~ 320 (377)
T d1k8qa_ 241 FIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWN 320 (377)
T ss_dssp HHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEE
T ss_pred HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE
T ss_conf 42037771114677766666315553359999999999753741220330345556651345751222754899989999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
.
T Consensus 321 G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~~ 377 (377)
T d1k8qa_ 321 GGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp ETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCC
T ss_conf 589972289999999997799759999699988303424454999999999997229
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=0 Score=28409.38 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l 80 (377)
T d1ci9a_ 1 AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGEL 80 (377)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
T ss_conf 94189999999999998289875999999999999998478624455988999986860326899999999999975996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T d1ci9a_ 81 ALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFA 160 (377)
T ss_dssp CTTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 53322112331110134324577515013035532466633444113565540245665455899999999862888679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 PG~~~~Ys~~~~lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1ci9a_ 161 PGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHG 240 (377)
T ss_dssp TTSCCCCCTHHHHHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCSCGGGBCCCEECCSSSCEECCTTEEEECCTTSC
T ss_pred CCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99627607689999998763133203455467786213875343357826640000024677653134654345545666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~G~~~~~~~~~ 320 (377)
T d1ci9a_ 241 AAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDP 320 (377)
T ss_dssp SEEEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCHHHHHHHHSCSSCGGGCTTSTTEEECSSSEEESCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEECCC
T ss_conf 54345763223645555677632235999999999765116787077876650102477766678971241011430376
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~g~~~h~G~~gt~~~idP~~~l~vv~ltN~~~~~~~~~~~~~l~~~vYa 377 (377)
T d1ci9a_ 321 AAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYA 377 (377)
T ss_dssp HHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEETHHHHSHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 535788999856626821418999944998999988489999875999999982189
|
| >d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: SSO1389-like superfamily: SSO1389-like family: Cas DxTHG domain: Hypothetical protein SSO1389 species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=28407.99 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~l~ia~wG~p~~w~~~~Y~~~~~~~~~~~s~~~l~~~~~~d~~vi~~~dSl~~~~~~~~~d~~~~~~~~~~~~~~~l~ 80 (377)
T d2i71a1 1 MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG 80 (377)
T ss_dssp CEEEEEEEESCTTCCCCEEEEETTEEEEESSHHHHHHHHTTCSEEEEEEEGGGGGGGTCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 95499993478665728999978931204455999998747883999997301123468822799999999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~viv~P~vg~~f~g~~~~~~~~~~~~l~~~l~~~~~~eI~lD~thGiNy~~~~~~~a~~~~~~~~~~~~~~~~~l~~ 160 (377)
T d2i71a1 81 ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL 160 (377)
T ss_dssp CCSCEEEECCCBTTEESCTHHHHHHHHHHHHHHHHHHTEEEEEEEEEECCTTHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 88449992797628856888999999999999850389868999777870059999999999999999974578744999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~nsdP~~~~~~~~~~I~~i~~~~i~p~~~~~~i~~~fl~~~k~~~~~~~ke~~~~i~~~~~al~~gl~lyL~~~~~~~~l 240 (377)
T d2i71a1 161 YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL 240 (377)
T ss_dssp EECCCTTCCTTSEEECEEEEEEEECHHHHHHHHHHHHHTSCTTTTTTSSTTHHHHHHHHHHHHHTTCHHHHHHSCCHHHH
T ss_pred EECCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
T ss_conf 94776568887746999840126221466554303566667777678888888899999986540429999874022327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~e~~~~~~~~~~~~e~~~~~~~~~~~~~y~~~~~~~~~~i~~~~~~~~l~~l~e~~~~~v~~~~i~~Ei~~i~~~~~~ 320 (377)
T d2i71a1 241 KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG 320 (377)
T ss_dssp HHHHHHHHSCCEEEECSSCEEEECCCHHHHHHHHHHHHHGGGCSCEEHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88998630002330465312302330788999999998740230210899999998861356999999999988861477
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~k~~~~~~~~~d~RNF~AHaGLe~nvt~vk~~~~~i~v~y~e~~~~i~~~l 377 (377)
T d2i71a1 321 SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI 377 (377)
T ss_dssp SSCEEGGGTC---------CHHHHTTTCCTTTCEEEEETTEEEEECGGGHHHHHHHC
T ss_pred CCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCC
T ss_conf 760478886310147885300100348652729999669889998787599998419
|
| >d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: V-region of surface antigen I/II (SA I/II, PAC) family: V-region of surface antigen I/II (SA I/II, PAC) domain: V-region of surface antigen I/II (SA I/II, PAC) species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=28407.31 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~kdla~Y~~~l~~Y~~e~~~y~~alae~ek~KnedGyl~~p~aQ~LvF~~Ep~A~~ti~~~gk~~~a~~~~~~~~~~~~~ 80 (377)
T d1jmma_ 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKASAVDDAFSKSTSK 80 (377)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSTTSBSSCCCBCEECSCCTTCEEEEEESSEEECHHHHHHHHHSGGGH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCH
T ss_conf 94077889999999999999999999998740556663640145414316787268885255311301112233044303
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~l~kg~~vtvTYtNL~nSsynGKKI 160 (377)
T d1jmma_ 81 AKYVQKILQLDDLDITNLEQSNDVASSMELYGNFGDKAGWSTTVSNNSQVKWGSVLLERGQSATATYTNLQNSYYNGKKI 160 (377)
T ss_dssp HHHHTTEECGGGCCGGGGCSGGGEESSCCEEETTSTTSSCEETTTBTSCCEEEEEEECTTCEEEEEEECCSSCEETTEEE
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEE
T ss_conf 33101010223443224333322000002355555445501024567753025699617998999962754442178323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 sKvvytYtl~~s~s~~g~~i~~~l~~DPT~t~f~~~~~g~~~~~~~~~v~~~vkFYDe~G~~i~~~~Al~S~sSLN~~~~ 240 (377)
T d1jmma_ 161 SKIVYKYTVDPKSKFQGQKVWLGIFTDPTLGVFASAYTGQVEKNTSIFIKNEFTFYDEDGKPINFDNALLSVASLNREHN 240 (377)
T ss_dssp EEEEEEEEECTTCCCSSSCEEEEEESSGGGCEEEECCCSSCBSSCEEEEEEEEEEEETTSCBCCEEEEEEEECCCCBCSS
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCC
T ss_conf 69999999555788888624689815995279998512666656643899999999789989226602687410258998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~iE~V~~~ng~fv~I~GSSV~~~~g~~ya~~~~~~~~~~~Gsr~~~~~~~~~~s~WD~~~s~~ayYGA~v~~~~g~~~~~ 320 (377)
T d1jmma_ 241 SIEMAKDYSGKFVKISGSSIGEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNHV 320 (377)
T ss_dssp EEEEEESCSSEEECBTTCSEEEETTEEEECSSCCSSTTSTTCSSCSSCCSSTTCCCCSSSCTTGGGGCEEEEEEESCEEE
T ss_pred CEEEEECCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE
T ss_conf 46899748971899579766865994772677432346676421223467766787778997631123778970895489
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
-
T Consensus 321 t~g~~~a~~~~~~~~~~~~~~~d~~~~~~~~iWfa~ns~i~a~~vp~~~~e~Pt~P~ 377 (377)
T d1jmma_ 321 TVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPV 377 (377)
T ss_dssp EEEEEEGGGTSCGGGSCCCTTCCTTCCBCSEEEECCBSCCCSSSCCBCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 970455432246644455666655567776231674378765458999987899989
|
| >d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Carnitine acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28413.48 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~Q~sLP~LPvP~L~~Tl~ryL~s~kPl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~ 80 (377)
T d1nm8a1 1 HHTDPLPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQ 80 (377)
T ss_dssp CCCCCCCCCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 96567998999999999999999865149999999999999998736860799999999975147773468899886435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~R~pl~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~plcM~qy~~lF~t~RiP~~~~D~ 160 (377)
T d1nm8a1 81 YRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDT 160 (377)
T ss_dssp CCSCSBTTTBCEEECCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEETTEECCCGGGGGTTTEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHCCCEECCCCCCCC
T ss_conf 88785466766300267777760679999999999999999998728778656589944189998761765068999883
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~~~~~~~~~HIvV~~~g~~ykv~v~d~~g~~ls~~ei~~~l~~I~~~~~~~~~~~vg~LTt~~Rd~Wa~~r~~L~~~ 240 (377)
T d1nm8a1 161 VSNFSKTKKPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKD 240 (377)
T ss_dssp EEECTTSSSCCCEEEEEETTEEEEEECBCTTSCBCCHHHHHHHHHHHHHTCCCCCSCCGGGGGGSCHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 20057778888769999899899999988999899899999999999961104688886405678728999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~N~~~L~~Iesalfvv~LDd~~p~~~~e~~~~~~~~~~lhG~g~~~~~~NRW~DKs~q~IV~~nG~~g~~~EHS~~DG~ 320 (377)
T d1nm8a1 241 KVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGP 320 (377)
T ss_dssp HHHHHHHHHHHHSSCEEEEECCCSCCCSTTHHHHHHHHHHHCSCTTTTTTSCCTTBSEEEEEETTSCEEEEECTTSCCHH
T ss_pred CHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH
T ss_conf 60799999997547888833788888613666666555033687557987726665517999789877862267761289
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------6
Q 001706 633 --------------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~v~~~~~~v~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~a~~~~~~li~D 377 (377)
T d1nm8a1 321 PIVTLLDYVIEYTKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQD 377 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999987234666788778899975878976989999999999999998259
|
| >d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase ArnB species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=28336.09 Aligned_cols=1 Identities=0% Similarity=-1.123 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~E~~la~~~g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~ 80 (376)
T d1mdoa_ 1 DFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMT 80 (376)
T ss_dssp CCBCSCCCCCCHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 98668999999999999999996699768977999999999998819599968889999999998089998989872343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~ 160 (376)
T d1mdoa_ 81 WVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTS 160 (376)
T ss_dssp CHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred CCCCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHCCCE
T ss_conf 42110001103431244114433347899999975478981999867888715333899988741946996464310674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 240 (376)
T d1mdoa_ 161 YKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLN 240 (376)
T ss_dssp ETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHH
T ss_pred ECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
T ss_conf 68820466657664278867787788888997125679998764036876443332233323311000012353440145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~ 320 (376)
T d1mdoa_ 241 AAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGL 320 (376)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 66655433333579999866534554311465433221234444544332222220002133399999999987998465
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~~ 376 (376)
T d1mdoa_ 321 HFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 376 (376)
T ss_dssp CCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ECCCHHCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78532308998952887898799999859798448999999999999999999729
|
| >d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Alaserpin (serpin 1) species: Tobacco hornworm (Manduca sexta) [TaxId: 7130]
Probab=100.00 E-value=0 Score=28336.00 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 g~~~~~~~l~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~ 80 (376)
T d1k9oi_ 1 GETDLQKILRESNDQFTAQMFSEVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNR 80 (376)
T ss_dssp CTHHHHTTHHHHHHHHHHHHHHHHHTTSTTSCEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTTCSCTTHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 98558999999999999999999983298981998889999999999986673899999997099985457999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~~ 160 (376)
T d1k9oi_ 81 GVRAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVEDQTNNRIKNLVDPDALDETT 160 (376)
T ss_dssp SCSCCSSBCCEEEEEEEEESSCCBCSGGGSTTTSSSCCCEEEECTTSHHHHHHHHHHHHHHHTTTSSCCCSCGGGCCTTC
T ss_pred HHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH
T ss_conf 87536798578854002304887166899998752286554245555699999999999986378221006877899501
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~l~~~vveLP~~~~~~sm~iilP~~~~ 240 (376)
T d1k9oi_ 161 RSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVD 240 (376)
T ss_dssp CEEEEEEEEEEBCBSSCCCGGGCEEEEECSSSSCCEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGGSEEEEEEEESSTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 45665515655422278883233513053279926999723421417887507798799996237993699999668776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~l~~~~~~l~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGl~~~F~~~~ad~s~~~~~~~~l~vs~v~q~ 320 (376)
T d1k9oi_ 241 GITALEQKLKDPKALSRAEERLYNTEVEITLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKTKESLTVDAAIQK 320 (376)
T ss_dssp THHHHHHHTTSTTTTTTTTTSCEEEEEEEEEECEEEEEEEEHHHHHHTTTCCSTTSTTTSCBTTTBSSCCCCCCSEEEEE
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 63578864225346899875151228999843589752212788765438754357652312356588998788736877
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~ievdE~G~~a~a~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~~~lf~G~v~~P 376 (376)
T d1k9oi_ 321 AFIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIEP 376 (376)
T ss_dssp EEEEECSCBSSCSSSCCSSSEESCCCCCCEEECCSCEEEEEEESSSEEEEEEESCC
T ss_pred EEEEECCCCEEEECCCCEEEECCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCC
T ss_conf 89999987116001432344116788897599648979999979969999994288
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=100.00 E-value=0 Score=28335.94 Aligned_cols=1 Identities=0% Similarity=-0.859 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~i~~F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfV 80 (376)
T d2vata1 1 NRFEASLDAQDIARISLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFI 80 (376)
T ss_dssp CHHHHTSCCCEEEEEEEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEE
T ss_pred CCHHHCCCCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf 93220345475375376782799885895699996256488899889984887677021234887077998637463389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 I~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v 160 (376)
T d2vata1 81 ICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYV 160 (376)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHH
T ss_conf 98346788767888877896212377545568852057889999999987386617886134278899999998361777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~ 240 (376)
T d2vata1 161 RKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRN 240 (376)
T ss_dssp CCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 52312356523455778888999987422212457775433116789999999999984599999999723224422200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~L 320 (376)
T d2vata1 241 ISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPAL 320 (376)
T ss_dssp -----------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEE
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 01000111013444332222343156799999987765530555012899999998503333338899999850899989
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
.
T Consensus 321 vI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 321 IICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 99868420849999999998627874999899988652266999999999999748
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28334.26 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 MKi~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (376)
T d1f6da_ 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKP 80 (376)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96999998267399999999999738998779999088989999999862878774400488999899999999986478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~~~~~L~~~G 160 (376)
T d1f6da_ 81 ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN 160 (376)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHHHHHHTT
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
T ss_conf 89745676224310344313689998740753899852446542000474066554203200488743478886877518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ 240 (376)
T d1f6da_ 161 VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ 240 (376)
T ss_dssp CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEE
T ss_pred CCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 98653412167248788887765423512321111022334777766998335411112009999999865434214047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssgi~Ea~~lg~P~Inir~~ter~~~~~~g 320 (376)
T d1f6da_ 241 IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG 320 (376)
T ss_dssp EEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEECC
T ss_conf 85254432124446766640444513323556789999984163998368506766787489889727876576412368
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~i~v~~~~~~I~~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~~~i~~ 376 (376)
T d1f6da_ 321 TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (376)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 06987899999999999997285766530457898989849999999998568999
|
| >d1wu4a1 a.102.1.2 (A:6-381) Xylanase Y {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Xylanase Y species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=28332.33 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~g~~~~~~y~n~~~~~g~~q~~~~~k~~~~~~~~f~~~~~~~~y~~~~~~~~yv~d~~n~dv~SEGqgYGMl~Av~~~dr 80 (376)
T d1wu4a1 1 EGAFYTREYRNLFKEFGYSEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTGNLDVRTEGMSYGMMMAVQMDRK 80 (376)
T ss_dssp CCHHHHCCCCCHHHHTTCCHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTTTTBEEHHHHHHHHHHHHHTTCH
T ss_pred CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 99764675552888828899999999999999981689766189971798558766799985556799999999980999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~FD~lw~wt~~~l~~~d~~~~~L~aW~~~~~g~v~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~~~Y~~~A~~il~~i 160 (376)
T d1wu4a1 81 DIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTC 160 (376)
T ss_dssp HHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999985367777666715336799997889988767999999999999874887533356999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~nPSY~~P~~~~~fa~~a~~~~~~~W~~~~~~s~~ll~~~~~~~tGL~PDw~ 240 (376)
T d1wu4a1 161 VHNGEGGPGHPMWNRDNKLIKFIPEVEFSDPSYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYA 240 (376)
T ss_dssp HHTTSSSSCCCSBCTTTCCBCSSTTCSEECGGGCCHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCCSSE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 98546788865103674455558887502801037899999998613477457999999999999971147879998425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~dg~~~~~~~~~~~~yDA~Rvpl~ia~d~~w~g~~~~~~~~~~~~~~f~~~~~~~~~~~y~~dG~~~~~~~~~~~g~~a 320 (376)
T d1wu4a1 241 YYDGTPNDEKGYGHFFSDSYRVAANIGLDAEWFGGSEWSAEEINKIQAFFADKEPEDYRRYKIDGEPFEEKSLHPVGLIA 320 (376)
T ss_dssp ETTSSBCCTTSCSSBSGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCCGGGCEEECTTSCEEEEECSCHHHHHH
T ss_pred EECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 35895378778997750199999999977512575356799999999998634666688553368414677888679999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~a~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~Llall~lsG~~r~~~p 376 (376)
T d1wu4a1 321 TNAMGSLASVDGPYAKANVDLFWNTPVRTGNRRYYDNCLYLFAMLALSGNFKIWFP 376 (376)
T ss_dssp HHHHGGGGCTTCTTHHHHHHHHHTSCCCCSTTHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99999997279716899999987234788888878999999999998298444179
|
| >d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: PstS-like phosphate-binding protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28332.17 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~i~gaGat~p~p~~~~~~~~~~~~~~y~~~GSG~G~~~~~~g~~~~~~~~~~~tvdfa~sd~~l~~~E~~~~~~~~~~~~ 80 (376)
T d2v3qa1 1 DINGGGATLPQKLYLTPDVLTAGFAPYIGVGSGKGKIAFLENKYNQFGTDTTKNVHWAGSDSKLTATELATYAADKEPGW 80 (376)
T ss_dssp CBCEEECSTTHHHHTSTTTSCTTBCCCEECCHHHHHHHHHHTCGGGTCSCTTSCCCEEEESSCCCHHHHHHHHHHTHHHH
T ss_pred CCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 93215222799999998763596789956576899999963886444556546771353477789999988774066777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~v~iPv~~~~Iai~~N~~~~~~l~Lt~~~L~~If~G~It~Wnd~~i~~p~~~I~vv~R~d~SGTt~~Ft~~L~~~~~~ 160 (376)
T d2v3qa1 81 GKLIQVPSVATSVAIPFRKAGANAVDLSVKELCGVFSGRIADWSGITGAGRSGPIQVVYRAESSGTTELFTRFLNAKCTT 160 (376)
T ss_dssp CCEEEEEEEEEECBCBBCCCCSSCCEECHHHHHHHHHTSCCBGGGSTTSCCCSBCEEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEEEEEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
T ss_conf 86289747764479987347625543479999843337623001135457677854784489986078889988652755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~g~~~~~~~~~~~~~~~~~~~~~a~gs~gv~~~v~~~~~~~gaIGY~~~~ya~~~~~~l~~~~~~~~~~~~~~~~~ 240 (376)
T d2v3qa1 161 EPGTFAVTTTFANSYSLGLTPLAGAVAATGSDGVMAALNDTTVAEGRITYISPDFAAPTLAGLDDATKVARVGKGVVNGV 240 (376)
T ss_dssp SSSCBCCCSCGGGTBTTCSTTSTTCEEESHHHHHHHHHHCTTSCSCEECCBCHHHHSSSGGGGGCTTTBCEECCEEETTE
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCEEECC
T ss_conf 32234643102332245677677650003573087887540477765444430100022222103332024453000035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~v~pt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YPI~~~~y~~~~~~~~~~~~~~~vk~Fl 320 (376)
T d2v3qa1 241 AVEGKSPAAANVSAAISVVPLPAAADRGNPDVWVPVFGATTGGGVVAYPDSGYPILGFTNLIFSQCYANATQTGQVRDFF 320 (376)
T ss_dssp EECCBCCCTHHHHHHHHTCCCCCGGGTTCGGGGSCEEESSCBTTEEECCSSSCSCEEEEEEEEESCBSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCHHHHHHHHHH
T ss_conf 66621245888997651144554344566532223334322001357888851112111100002368700159999999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~l~~~~~gq~~~~~~GyvPLp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (376)
T d2v3qa1 321 TKHYGTSANNDAAIEANAFVPLPSNWKAAVRASFLTASNALSIGNTNVCNGKGRPQ 376 (376)
T ss_dssp HHHTCSSSSSHHHHHHTTCBCCCHHHHHHHHHHHTSTTSTTSTTCHHHHTTCCBCC
T ss_pred HHHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99860553257889978974399999999999986225420227864367788999
|
| >d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28331.20 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~ 80 (376)
T d1eg5a_ 1 MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKT 80 (376)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHC
T ss_conf 97988786316699999999999998748987654699999999999999999998098978099979878997766621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~ 160 (376)
T d1eg5a_ 81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVED 160 (376)
T ss_dssp HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHH
T ss_conf 44332235763223432220128999999866988999768988727789999864899608999777665412554124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~~~p~~~g~~~~~~~~~~~~~ 240 (376)
T d1eg5a_ 161 VTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQN 240 (376)
T ss_dssp HHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44554311467504787531246545520004865000125434357886268852576658720189875445477664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr~ 320 (376)
T d1eg5a_ 241 VPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST 320 (376)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEC
T ss_conf 02456677775402210246666666543200012331011123433211256023225997999999988559908967
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
=
T Consensus 321 G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~~l 376 (376)
T d1eg5a_ 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (376)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 61103886206699997399834479889996589899999999999999999639
|
| >d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Galacturonase domain: Polygalacturonase species: Erwinia carotovora, subsp. carotovora [TaxId: 554]
Probab=100.00 E-value=0 Score=28329.30 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~T~aIq~AIdac~~Gg~V~iP~G~~~vyltg~i~LkSnv~L~l~~ga~L~~s~d~~ 80 (376)
T d1bhea_ 1 SDSRTVSEPKTPSSCTTLKADSSTATSTIQKALNNCDQGKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp CCSSCCCCCCCCCEEEEEECCSSBCHHHHHHHHTTCCTTCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSG
T ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECEEECCCCEEEEECCEEEEECCCHH
T ss_conf 98654578989975686789997369999999987779999999699745699804897888789991997999738979
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~y~~~~~~~~~~~~~~~~~~~~i~~~~~~Ni~ItG~G~IDG~G~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~ 160 (376)
T d1bhea_ 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSK 160 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCE
T ss_pred HCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 96566630236751576541268824863079972768813344162277641000123444466777897699999115
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 nv~i~~iti~ns~~~~~~~~~~~~v~i~n~~I~~~~~~~NtDGidi~~s~nv~I~n~~i~~gDD~i~~ks~~~~~~~~ni 240 (376)
T d1bhea_ 161 NFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEE
T ss_pred CEEEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEEECCCCCEEEECCCCCCCCCEE
T ss_conf 68997039955993699996885599996750588657776340025645099982533048981566046677774459
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~i~n~~~~~~~g~~iGs~~~~v~nv~i~n~~~~~~~~g~~Iks~~~~gG~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~~ 320 (376)
T d1bhea_ 241 SILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGS 320 (376)
T ss_dssp EEEEEEECSSSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCC
T ss_pred EEEEEEEECCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 99963896688730645668778899993258688704789825887607989999968993667448998144788888
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------6
Q 001706 633 -------------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~i~nIt~~Ni~~~~~~~~~l~g~~~~~~~~v~~~nv~i~~~~~~~~~nv~~k~ 376 (376)
T d1bhea_ 321 NVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVNVKK 376 (376)
T ss_dssp CCCEEEEEEEEEEEECSCCEEEEECTTCSSCEEEEEEEEECCTTCEEEEESEEEEC
T ss_pred CCCEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEECC
T ss_conf 79779518999079935325999868888823699984899759888788055329
|
| >d2fug41 e.18.1.2 (4:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: HydB/Nqo4-like superfamily: HydB/Nqo4-like family: Nqo4-like domain: NADH-quinone oxidoreductase chain 4, Nqo4 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28261.92 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~~hG~~r~~~~v~ge~V~~a~~~ig~~~RGfEk~l~Gr~~~da~~i~~RICGIC~~aH~~A~~~AlE~a~gv~~p~~a~ 80 (375)
T d2fug41 1 PSTHGVLRLMVTLSGEEVLEVVPHIGYLHTGFEKTMEHRTYLQNITYTPRMDYLHSFAHDLAYALAVEKLLGAVVPPRAE 80 (375)
T ss_dssp CEEECSSSCEEEECCSSSCCEEEECCTTCCCHHHHGGGSCHHHHHHHGGGTTSSSHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99885289999976988999898306652689998749996882212063111038799999999999991998899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~lR~l~~~~e~i~sH~l~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~G~~~h~~~~~~gG~~~~~~~~~~~~~~~~~ 160 (375)
T d2fug41 81 TIRVILNELSRLASHLVFLGTGLLDLGALTPFFYAFRERETILDLFEWVTGQRFHHNYIRIGGVKEDLPEEFVPELKKLL 160 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTSSSSSCCCEETTEESSCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCEEECCCHHHHHHHHHHH
T ss_conf 99999999988767999999834520024388899999899999999846865520521202302279867889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 240 (375)
T d2fug41 161 EVLPHRIDEYEALFAESPIFYERARGVGVIPPEVAIDLGLTGGSLRASGVNYDVRKAYPYSGYETYTFDVPLGERGDVFD 240 (375)
T ss_dssp TTTTTTTHHHHHHHSSCSCCTTSCSCCCCSSSCSTTTTTTCCSSCCSSCCTTTTTCCSSCCCC-----CCCCCCSSSSHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76088778898740367500002577533451023315765554555642133120067554556565534424776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~g~vEApRG~L~ 320 (375)
T d2fug41 241 RMLVRIREMRESVKIIKQALERLEPGPVRDPNPQITPPPRHLLETSMEAVIYHFKHYTEGFHPPKGEVYVPTESARGELG 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSCCBCCCTTTSCCCTTCTTTCTTHHHHHHHHHHSCCCCCSCCCCCCBCCSSSCBC
T ss_pred CCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEE
T ss_conf 10213444421468999899748898744344110335699997554541013444566776899579999974886799
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------6
Q 001706 633 ------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------~ 633 (1024)
.
T Consensus 321 H~~~~d~~g~i~~~~ii~PT~~N~~~~e~al~G~~i~D~~~iirSfDpC~sC~dr 375 (375)
T d2fug41 321 YYIVSDGGSMPYRVKVRAPSFVNLQSLPYACKGEQVPDMVAIIASLDPVMGDVDR 375 (375)
T ss_dssp EEEECCSSSSCSEEEECCSHHHHTTTHHHHTTTSCGGGTTHHHHTTCCCHHHHHC
T ss_pred EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999989981899999898877999999996799167899998567976447898
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=28259.62 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~i~EG~~~i~vp~~~~~~~~~vFYNp~q~~NRDlsvl~~~~~~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~ 80 (375)
T d2dula1 1 LIEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 80 (375)
T ss_dssp CEEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred CEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 94899586899941787778788242877764107999999973998799868774099999998589978998259989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~v 160 (375)
T d2dula1 81 AYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGV 160 (375)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999986375432211243323554336741004556567515767744578888817999999997044877999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 TaTD~a~L~G~~~~~~~r~Yg~~~~~~~~~~E~glRill~~i~r~Aa~~~~~i~PllS~~~~~y~Rv~vrv~~~~~~~~~ 240 (375)
T d2dula1 161 TATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDE 240 (375)
T ss_dssp EECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEESHHHHHH
T ss_pred EECCCHHHCCCCCHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCHHHHHH
T ss_conf 93686120479917899972876137866501889999999999987429805999999824607999999137677887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~g~~~~C~~c~~~~~~~~~~~~~~~~~GPlW~G~L~d~efl~~~~~~~~~~~~~~~~~~~~ll~~i~eE~~~P~~y 320 (375)
T d2dula1 241 TLEKLGYIYFDDKTGKFELEQGFLPTRPNAYGPVWLGPLKDEKIVSKMVKEAESLSLARKKQALKLLKMIDQELDIPLFY 320 (375)
T ss_dssp HHTTEEEEEECTTTCCEEEEESSSCCSSSCEEEEECSCSBCHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHSCCSSCCE
T ss_pred HHHHCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88744817871898877775588999787867883673369999999998754057540569999999998614998298
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------6
Q 001706 633 ------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~l~~la~~lk~~~P~~~~~~~aL~~~Gy~asrtH~~p~~iKTdAp~~~i~~i~r~ 375 (375)
T d2dula1 321 DTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIKR 375 (375)
T ss_dssp EHHHHHHHHTCCBCCHHHHHHHHHHTTCCEEEETTEEEEEEESSCHHHHHHHHBC
T ss_pred CHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHHHHHHHHC
T ss_conf 5799998739999999999999997898899657899977137999999999709
|
| >d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28259.23 Aligned_cols=1 Identities=100% Similarity=1.766 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 80 (375)
T d1o4sa_ 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGE 80 (375)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 94546548977899999999999977998589989588997889999999999855876889986789999999864332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1o4sa_ 81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 160 (375)
T ss_dssp HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 15655433323346728999999999981899989982586543102321122222233344332356136777775235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~ 240 (375)
T d1o4sa_ 161 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 240 (375)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCC
T ss_conf 76379981899885577999999999986887098124674003001333332112355778978999405142058866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~~ 320 (375)
T d1o4sa_ 241 RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKV 320 (375)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEC
T ss_conf 44543233331012232212344333320002334321121023678889999999987874495685689407999979
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------6
Q 001706 633 ------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l~~ 375 (375)
T d1o4sa_ 321 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 375 (375)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 9997999999998599999976115899969999728999999999999999659
|
| >d1ih7a1 c.55.3.5 (A:1-375) Exonuclease domain of family B DNA polymerases {Bacteriophage RB69 [TaxId: 12353]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage RB69 [TaxId: 12353]
Probab=100.00 E-value=0 Score=28259.41 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~fyt~v~~~gn~i~~rg~d~nG~r~~~~~~f~Py~Yv~~~~~~~t~~ksl~G~~v~~v~f~s~~e~r~~~k~~~~~~~ 80 (375)
T d1ih7a1 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGL 80 (375)
T ss_dssp CCCEEEEEEEETTEEEEEEECTTSCEEEEEECCCCEEEEECCTTSCCSCEETTSCBEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 98644022799999999999679989999954730699988999864534148817666746988999999997155543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~~~~~~~~~~i~d~~~~~~~~~~~~~~~~~~DIE~~~~~~~p~~~~~~~~i~~I~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1ih7a1 81 EALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVE 160 (375)
T ss_dssp CCBSCCCHHHHHHHHHTCSCCCCCGGGSCEEEEEEEECCSSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 11256641201012357654566754220455788970576656864232100011246615880999996377756654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~sE~eLL~~F~~~~~~~dPDiitGwN~~~FD~pYL~~R~~~~~~~~~~~ 240 (375)
T d1ih7a1 161 EWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAK 240 (375)
T ss_dssp CCCHHHHHSCTTTTCCCCCHHHHTTEEEEEESSHHHHHHHHHHHHHHSCCSEEEETTTTTTHHHHHHHHHHHHHCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHH
T ss_conf 32212233311124555655567985999829999999999999876498899871777887099999998640100233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~D~~~~~~~~~~~~~~s~~l~~v~~~~l~~~K~~~~~~~~~~~~~d~~~~ 320 (375)
T d1ih7a1 241 RLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRY 320 (375)
T ss_dssp GGSTTSCEEEEEEECSSCEEEEEEETTCEEEEHHHHHHHHSSCCCSCCSHHHHHHHHTCCCCCCCSSCGGGHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
T ss_conf 44423785079998512554011035640002899998753023210005678888751466557555999987494686
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------6
Q 001706 633 ------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~Y~~~D~~L~~~L~~kl~~i~~~~~~a~~~~v~~~~v~~q~~~~~~li~~~~~~ 375 (375)
T d1ih7a1 321 ISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKE 375 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSCGGGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6520998999999999872899999999987959899738999999999999529
|
| >d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=28260.13 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~k~v~~f~e~~~~d~~lvGGK~AnLgel~~~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~~l~~l~~~~~~~~~ 80 (375)
T d1kbla3 1 AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFG 80 (375)
T ss_dssp CCCEEEGGGCCGGGHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSCBT
T ss_pred CCEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97789887799023643828899899999783998998885099999999826657487999999999866643275446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (375)
T d1kbla3 81 DTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE 160 (375)
T ss_dssp CSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 54320121010013432100014676630350456667651343233211310255542000011015678888876653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~~~~~~~i~~~~glg~~vv~ 240 (375)
T d1kbla3 161 EKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQT 240 (375)
T ss_dssp HTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEC
T ss_conf 04337777767888999999999999875148865553024445530146773146655554420341466666630102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~eLa~~a~~iE~~yG~PqD 320 (375)
T d1kbla3 241 MVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQD 320 (375)
T ss_dssp CCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSSCCEEGGGHHHHCHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 21057774226641245675444321122000013466642431226654431321808999999999999998199614
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------6
Q 001706 633 ------------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------------~ 633 (1024)
=
T Consensus 321 IEWAi~dG~l~ILQaRPv~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T d1kbla3 321 MEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL 375 (375)
T ss_dssp EEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHHSCGGGGGGG
T ss_pred EEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC
T ss_conf 6999999989999766788657869999999998699799999872794211229
|
| >d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: MdoG-like domain: Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28192.90 Aligned_cols=1 Identities=0% Similarity=0.703 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 F~f~~l~~~Ar~lA~~py~~p~~~lP~~l~~L~Yd~yr~Irf~~~~alW~~~~~~f~v~~fh~G~~f~~pV~i~~V~~g~ 80 (374)
T d1txka2 1 FSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA 80 (374)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCCCCCCCC----CHHHHTTCEECGGGCBTTTSSCSCEEEEEECBTTBCSCBEEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf 98799999999985189889876689878729998971636486521105799998787627876679877999970995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~i~fd~~~F~y~~~~~~~~~~~~~GfAGFRl~~pln~~~~~de~~~FlGASYFRavg~g~~YGlSARGLAIdTa~~~g 160 (374)
T d1txka2 81 VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSG 160 (374)
T ss_dssp EEECCCCGGGEECTTSCCCTTTSTTCCEEEEEEEECSSCTTCCEEEEEEESTTEEEECCTTCCCCCEEESCEESTTCTTC
T ss_pred EEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHEEEECCCCCCCCCHHHEECCCCCCCC
T ss_conf 68810188996678877784556678730599963467887443167771620224534897366311010005799987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 EEFP~F~~FWle~P~~~~~~~~vyALLDspSvtGAYrF~i~PG~~t~~dV~a~Lf~R~~v~~lGiAPLTSMf~~ge~~~~ 240 (374)
T d1txka2 161 EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPS 240 (374)
T ss_dssp CBCCEEEEEEEECCCTTCCCEEEEEEEEETTEEEEEEEEEECSSSEEEEEEEEEEESSCCSCEEEEEEEECEEEBTTBCC
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf 67987748996657899976999999239741007999997599889999889980676121350211365306898899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~dD~RPeVHDSDGL~i~~g~GE~iWRPL~NP~~l~~S~f~d~~p~GFGLlQRdR~F~~YqD~ea~Ye~RPSlWVeP~gd 320 (374)
T d1txka2 241 PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE 320 (374)
T ss_dssp SSCCSCSCEESCCEEEEECTTSCEEEEECCCCSSCEEEEEEEESCCEEEEECCCCCGGGTCCTTTCGGGCCEEEEEESSC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEECCCCHHHHCCCHHHHCCCCEEEEEECCC
T ss_conf 88987875525664379737996782368898862175675589863233613777232306413233487378876676
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
+
T Consensus 321 WG~G~V~LvEIPT~~E~~DNIVAfW~P~~~~~~G~~~~f~Yrl~W~~~~p~~h~ 374 (374)
T d1txka2 321 WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHA 374 (374)
T ss_dssp CCEEEEEEEECCCSCTTSCCEEEEEEESCCCCTTCEEEEEEEEEEESCGGGGSC
T ss_pred CCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 778679999768997243658999767887899996989989974789876679
|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28185.75 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 v~rGL~Gv~v~eS~Is~IDg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~LP~~~el~~f~~~l~~~~~lp~~~~~~l 80 (374)
T d1ioma_ 1 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESF 80 (374)
T ss_dssp CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99888998485655636748988899988559998703999999999978969799999999999997047988898999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~p~~~~pm~~l~~~vs~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~s~a~n~l~m~~ 160 (374)
T d1ioma_ 81 KRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMAN 160 (374)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 85343421157777766652125752223310689999998624305788899998469877788603679999877623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~p~~~~~~~l~~~lvl~aDHg~n~St~aaR~~aSt~~d~~~av~agl~al~GplhGga~~~~~~~l~e~~~~~~~~~~ 240 (374)
T d1ioma_ 161 GVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREW 240 (374)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
T ss_conf 89999899999875613452588765122422554058747788888887337866786528999999850675354999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 v~~~l~~~~~i~GfGH~vy~~~DPRa~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~pNvd~~~~~l~~~l 320 (374)
T d1ioma_ 241 VREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDL 320 (374)
T ss_dssp HHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99998678877776764333553237999999998776427722789999998432430266898878689999999984
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 Gip~~~~~~lf~i~R~~Gw~AH~~E~~~~~~~l~RP~~~Y~G~~~r~~~p~~~R 374 (374)
T d1ioma_ 321 GFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 374 (374)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSSCCCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 988565559999999999999999998557985277540069999988676669
|
| >d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NagB/RpiA/CoA transferase-like superfamily: NagB/RpiA/CoA transferase-like family: IF2B-like domain: Initiation factor 2b species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=0 Score=28183.09 Aligned_cols=1 Identities=0% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~l~si~~~~~~v~ilDQ~~LP~~~~~~~~~t~~~v~~AIk~M~VRGAPaIgvaaA~glala~~~~~~~~~~~s 80 (374)
T d2a0ua1 1 MSKPHHATLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKS 80 (374)
T ss_dssp CCCCSSCCCCSEEEETTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99887895016999699999985788998179999699999998856370259429999999999999985222753001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~el~~~L~~a~~~L~~sRPTAVNL~nAv~rv~~~i~~~~~~~s~~e~~~~ll~~A~~i~~eD~~~n~~Ig~~Ga~li~e 160 (374)
T d2a0ua1 81 GREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILA 160 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999985597542256899999999864287778999999999999999999999999999978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~ilThcn~g~Lat~~~gtal~~i~~a~~~gk~~~V~v~EtRP~~qG~rlta~~L~~~gi~~t~i~Dsa~~ 240 (374)
T d2a0ua1 161 AAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAAS 240 (374)
T ss_dssp HHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHH
T ss_conf 88621788732676416753375113224677678997698617998046433464689999998616771899545256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~m~~~~v~~VivGad~v~~nG~v~nkiGT~~~A~~A~~~~vP~~v~a~~~k~~~~~~~~~~i~ie~r~~~ev~~~~~~~ 320 (374)
T d2a0ua1 241 SLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTK 320 (374)
T ss_dssp HHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBCTTTC
T ss_pred HHHHCCCEEEEEECCEEEEECCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66205642589852318984697886246499999999749988999115642767799775646678967734334566
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~v~np~fD~tP~~lIt~~iiTe~G~~~P~~~~~~~~~~~~~~~~ 374 (374)
T d2a0ua1 321 QRVVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAASAPYYDIASIIAQA 374 (374)
T ss_dssp CBCSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSSSSCCCHHHHHHCC
T ss_pred CEECCCCCCCCEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 120257888602486831789699499788889861655467721479896239
|
| >d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase homolog WlaK (PglE, Cj1121c) species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=28182.97 Aligned_cols=1 Identities=0% Similarity=-1.456 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~e~~~~~~~l~~~~~~~~G~~~~~fE~~~~~~~~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~ 80 (374)
T d1o69a_ 1 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY 80 (374)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 93899999999639807899899999999999978295999678799999999986988839999499661743799843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~ 160 (374)
T d1o69a_ 81 LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT 160 (374)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEECCEECCC
T ss_conf 44505734665321012123342100001233201111133310336888987651694410222342145678840688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~gd~~~fSf~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~ 240 (374)
T d1o69a_ 161 FGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLK 240 (374)
T ss_dssp SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 77557894257646534665222133689998530222233333333333458864244624566667777665431004
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~ 320 (374)
T d1o69a_ 241 KREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL 320 (374)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 67899998864024323333456787773140233034433224310000000010001210999999999879987873
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk 374 (374)
T d1o69a_ 321 WKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 374 (374)
T ss_dssp CCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 854342966534787899899999839898969887799999999999999979
|
| >d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Hect, E3 ligase catalytic domain superfamily: Hect, E3 ligase catalytic domain family: Hect, E3 ligase catalytic domain domain: WW domain-containing protein 1, WWP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28182.45 Aligned_cols=1 Identities=0% Similarity=-0.658 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~f~~~~~~~~~~~~~~i~V~R~~l~~d~~~~l~~~~~~~l~~~l~V~F~gE~g~D~GG~~rEff~~l~~el 80 (374)
T d1nd7a_ 1 HMGFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEV 80 (374)
T ss_dssp CCTHHHHHHHHHHHHHHTCCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGSEEEEEETTTCCCCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 96378999999988761689885599976565899999999716989847876999789874478711999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~p~~~lf~~~~~~~~~~~~~p~~~~~~~~~~~f~~lG~lig~al~~~~~~~~~f~~~f~k~Llg~~~t~~DL~~iD~~~ 160 (374)
T d1nd7a_ 81 LNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160 (374)
T ss_dssp TCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHH
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCHHH
T ss_conf 08866875664798855355874436805899998857999999984961387756899988549989899998857898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~sl~~l~~~~~e~~~l~l~f~~~~~~~~~~~~~eL~~~G~~~~VT~~N~~~yv~~~~~~~l~~~~~~~~~afr~Gf~~v 240 (374)
T d1nd7a_ 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEV 240 (374)
T ss_dssp HHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 87499998546410466035787751278742254478997652068789999999999997211789999999869876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ip~~~l~~f~~~eL~~licG~~~id~~~l~~~~~y~gy~~~s~~i~~fw~vl~~~t~ee~~~fL~FvTGs~rlP~~G~~~ 320 (374)
T d1nd7a_ 241 VPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAE 320 (374)
T ss_dssp SCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEESCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGG
T ss_pred CCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCHHH
T ss_conf 79898764889999986279987788999643261367899889999999877069999987446636899889864565
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 l~~~~~~~~~~i~~~~~~~~LP~A~TCfn~L~LP~Yss~e~l~ekL~~AI~~~e 374 (374)
T d1nd7a_ 321 LMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374 (374)
T ss_dssp CEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHSCC
T ss_pred HCCCCCCCCEEECCCCCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 435678875131468999999705440267669898899999999999997149
|
| >d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Morphinone reductase species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=28181.04 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~P~LF~Pl~Ig~~~lkNRiv~apm~~~~~~dg~~t~~~~~yy~~rA~gGlii~e~~~V~~~~~~~~~~~~i~~d~~ 80 (374)
T d1gwja_ 1 TSFSNPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQ 80 (374)
T ss_dssp CCCCCCCTTSCEEETTEEESCSEEECCCCCCCCSSSCCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCBTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 99994999998418998978875874458988999998799999999984878799974798886578889873555554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ 160 (374)
T d1gwja_ 81 EAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDGIPG 160 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 15666689998605862676554168655545588887100035556667655443565544567878860049999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ii~~f~~AA~rA~~AGfDgVEIH~ahGYLl~qFLSp~~N~RtDeYGGSlENR~Rf~~EIi~aIR~~vg~~~v~~r~~~~~ 240 (374)
T d1gwja_ 161 IVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFL 240 (374)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 99999999999998099888732220346778887535764454343121100567889998998838753225553100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~ld~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~ae~~l~~g~aD 320 (374)
T d1gwja_ 241 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD 320 (374)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHTCSEEEEECSCBTTBCCCCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC
T ss_conf 23687653247888876413110472277751576457886524999999998738878997895999999999869974
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 lV~~gR~~iadPd~~~K~~~G~~l~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~ 374 (374)
T d1gwja_ 321 AVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGAEVGYTDYPFLDNGHDRLG 374 (374)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCCCCCCCSSCCCC
T ss_pred EEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 844669998792299999759988888841125799988387888542235319
|
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28179.99 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~s~~~vd~~N~~i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~ 80 (374)
T d1rp4a_ 1 GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM 80 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 97878999899988999986378960434338899898999432574998998803775565861024101046664112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~~~ 160 (374)
T d1rp4a_ 81 KEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGE 160 (374)
T ss_dssp EECCTTCGGGSBHHHHSSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCTTS
T ss_pred HHCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 21145653002204033320355554431101334456777754766300856235888873788999999975789876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~~~~ 240 (374)
T d1rp4a_ 161 TGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240 (374)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHSEEETTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 43107788999988888888999998764167767637899999999736838889899999999999998888886467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~l~~~~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~CeKCrLwGKlQt~GlgtALKIL 320 (374)
T d1rp4a_ 241 FCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKIL 320 (374)
T ss_dssp TTSSTTTTHHHHHHHHHHTTCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77877789999999999871666678888538841399999999999999999716676376756899887799999998
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 f~~~~~~~~~~~~~~~~L~R~ElvALiNt~~rlS~SI~~v~~F~~m~~~~~~~~ 374 (374)
T d1rp4a_ 321 FEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLLER 374 (374)
T ss_dssp HHHHTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 535553346766664554599999999999999999999999999999764129
|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28178.14 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~DPR~iLkk~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T d2bvca2 1 SRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKG 80 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBGGGTTCSBCTTSCBCCCCCBCTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98869999999999997799870357726589997145445566776201363000246787656788887786656566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~~l~~~Gi~~~~~~~E~~~~gQ~Ei~~~~~~~l~aAD~~~~~k~~ik~vA~~~G~~atFmp 160 (374)
T d2bvca2 81 GYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMP 160 (374)
T ss_dssp CSCBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCS
T ss_pred CEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 50002000226899999998787469763763215666825887067630668999999999999999986397477764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 KP~~~~~Gsg~H~h~Sl~~~~~n~~~~~~~~~~lS~~~~~~iaGlL~h~~~l~al~~P~vNSY~Rl~~~~~ap~~~~Wg~ 240 (374)
T d2bvca2 161 KPLFGDNGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ 240 (374)
T ss_dssp CSSTTSCCCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSTTHHHHSSTTSSSCSBCCEEE
T ss_pred EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECC
T ss_conf 31567887660079974158988655566655567999999999985209888987378742653489875644774046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~nR~~~iRi~~~~~~~~~~riE~R~~da~aNPYL~lAailaagl~Gi~~~l~p~~p~~~~~~~~~~~~~~~~~~LP~sl~ 320 (374)
T d2bvca2 241 RNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASIPQTPTQLS 320 (374)
T ss_dssp TCTTSSEEECCCCSCTTSCCEEECSCCSSSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGCCHHHHHTSCBCCSSHH
T ss_pred CCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH
T ss_conf 76655311024468975626885278833107899999999866656412344687778513299657658132501799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
=
T Consensus 321 eAl~~l~~d~~~~~~~~~~g~~~i~~y~~~Kr~~E~~~~~~~vt~wE~~~Y~~~ 374 (374)
T d2bvca2 321 DVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEFALYYDV 374 (374)
T ss_dssp HHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHHHHHTTC
T ss_pred HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
T ss_conf 999999759787876563789999999999999999999689999999604899
|
| >d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Sialidase 2 (Neu2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28174.85 Aligned_cols=1 Identities=0% Similarity=0.303 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~p~~~~~~~f~~g~~~yRiP~lv~~~~g~~l~A~a~~r~~~~d~~~~~iv~~rS~D~G~T~~~~Ws~~~~v~~~~~~~~~ 80 (374)
T d1so7a_ 1 LPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHR 80 (374)
T ss_dssp CCCSEEEEEEECTTCCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEGGGTEEEECCCEECTTSCCTTEE
T ss_pred CCCCCEEEEEECCCCCEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
T ss_conf 99431267768895368647799985999999999687677668987699999637883043466798994778989955
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~p~~~~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~p~~i~~~~~~~~~~~~~~~~~~~~~ 160 (374)
T d1so7a_ 81 SMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGH 160 (374)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEECHHHHHGGGGGGEEEEEECSSC
T ss_pred EEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 56212789899997999998506877653224688885408999688886335686026610145435774366520233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~e~~~~e~~~~~~~~~~~~~~~~~~~r 240 (374)
T d1so7a_ 161 CLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRAR 240 (374)
T ss_dssp CEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCCCSBSEEEEEEEEEEC--CEEEEEEEEESSSEE
T ss_pred CEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE
T ss_conf 12664048868866676516766678971499999358754110156568888422588851456643677425478967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~S~D~G~tW~~~~~~~~l~~~~~~~~~~s~i~~~~~~~~~~~~~~~ll~~~p~~~~~r~~~~l~l~~S~D~G~tW~~ 320 (374)
T d1so7a_ 241 VQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSE 320 (374)
T ss_dssp EEEEESSTTSSCCCCEEEEEEECCTTTCCCCEEEEEECCCC----CSEEEEEEEECCSSSSEEEEEEEESSTTCGGGCCC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEECCC
T ss_conf 99996279966543202333448888885314898335434444688369983788988887608999998889916478
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~i~~g~~~YS~~~~~~dg~~~~~~i~~lyE~~~~~~i~f~~~~l~~~~~~~~ 374 (374)
T d1so7a_ 321 PVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEY 374 (374)
T ss_dssp CEEEEEEEEEEEEEEEEEECTTSSEEEEEEEEETTTTEEEEEEEEHHHHCGGGC
T ss_pred CEEECCCCCCCCHHEECCCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCCC
T ss_conf 548688997684525867998885699999956997657999989999175779
|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Psychrophilic chitinase B species: Arthrobacter sp., tad20 [TaxId: 1667]
Probab=100.00 E-value=0 Score=28173.50 Aligned_cols=1 Identities=0% Similarity=-0.725 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~ 80 (374)
T d1kfwa1 1 PLTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADF 80 (374)
T ss_dssp CCBSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHH
T ss_pred CCCCCCCCCEEEEEECCCEECCCCCCHHHCCCCCCHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98888888789999895400588898634767798524987999123014875532024311134778752347606541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lK~~~p~lKvllSiGGw~~s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l~ 160 (374)
T d1kfwa1 81 GMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLP 160 (374)
T ss_dssp TCCCCTTTSSSSSCCCTTCSCCHHHHHHHHHHTTCTTCEEEEEEECSSSCTTHHHHTSSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33334444456655653321013689999998618997599998189877763111047889999999999999981975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~~~~k~~~Ls~A~~~~~~~~ 240 (374)
T d1kfwa1 161 NFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI 240 (374)
T ss_dssp EETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
T ss_conf 21111232233244663011226514446777777887648999999999999999987563575389999852540011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlGipyd~ 320 (374)
T d1kfwa1 241 DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADN 320 (374)
T ss_dssp HHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEEEESCC
T ss_pred CCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCC
T ss_conf 23473266452004799997144046789987776675779977877777770699999999987999899389846799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------6
Q 001706 633 -----------------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~si~~K~~y~~~~glgG~m~W~~~~D~~g~Ll~a~~~~l~~~~~~~~~~~~p~ 374 (374)
T d1kfwa1 321 IATTKQKTDYIVSKGLGGGMWWELSGDRNGELVGAMSDKFRAAAPGPVTEAAPP 374 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGCTTCHHHHHHHHHHHHSSCCSCCCBCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999998569953999975579997499999998458899987788998
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=28106.82 Aligned_cols=1 Identities=100% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQFP 80 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99899989688999999999868998999958998858668954299899538658727887999999983885212332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1seza1 81 LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPF 160 (373)
T ss_dssp SSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHTTHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCHH
T ss_conf 11233212244333221122134442122211355566788887642000000111000000012223432001011012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~ 240 (373)
T d1seza1 161 VAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKD 240 (373)
T ss_dssp HHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 21010233110025567899987641001445567876404322222101234333203540453034612799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~~~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~D~Vi~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~ 320 (373)
T d1seza1 241 LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVYGH 320 (373)
T ss_dssp SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCCT
T ss_pred HCCCEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50655764987899999678542113552786124789746998899999986577653365557775332330100245
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~t~~pglf~aGd~~~g~~~~~A~~~G~~aA~~i~~~L~~~~ 373 (373)
T d1seza1 321 NYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLESVS 373 (373)
T ss_dssp THHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78867626423478999999972578765399999999999999999875289
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28106.08 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~MkkI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 1 GMKRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99769999873697999999999997189998899992688255637122408886656787888887789999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLK 160 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHH
T ss_conf 66664037640011136753103778898762122241343455433567616666655223443255122156666666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~ 240 (373)
T d1v4va_ 161 EGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVV 240 (373)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHH
T ss_pred HCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 30454213442662155777654311000223445531688426555312789999999986533565035640342221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~ 320 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEG 320 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHH
T ss_pred HHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCEEEECCCCHHHHCCHHHCCCEEEECCCCCCHHHHHCCEEEECCCCHHH
T ss_conf 03555543033320011100078888876430168506412222003205868984887669878962904975899999
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
.
T Consensus 321 I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~~~~~~~~~ 373 (373)
T d1v4va_ 321 VYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLGPRPEDWLP 373 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSSCCCCCCCC
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999719898864024889898987999999999998489989878899
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=100.00 E-value=0 Score=28104.76 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~a~~~~~~~~~a~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l 80 (373)
T d2madh_ 1 SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEF 80 (373)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEE
T ss_conf 90565434310132145678986563018999789997342257876599998999979999957988607986899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~ 160 (373)
T d2madh_ 81 ALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD 160 (373)
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEE
T ss_conf 99960577532124531899997778938889726885136851689708998589937999986987467762368728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 240 (373)
T d2madh_ 161 DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred EEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 99824520699962899199999479939999747742667886300366753043458878994299925896599997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~ 320 (373)
T d2madh_ 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV 320 (373)
T ss_pred CCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 68990789776305647578664136741335771499759995488824786258986999989999698986689982
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~~ 373 (373)
T d2madh_ 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNEA 373 (373)
T ss_pred EEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 58999989998999996799929999999998999988889898189984689
|
| >d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Dextranase, catalytic domain domain: Dextranase, catalytic domain species: Penicillium minioluteum [TaxId: 28574]
Probab=100.00 E-value=0 Score=28104.32 Aligned_cols=1 Identities=100% Similarity=1.666 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~ga~p~~~~d~t~a~~~a~~~~~~~~~~~vvy~PpG~y~~g~~~~~~~~~~~~~g~~l~~~~~~~y~~~G~~~~~~i~ 80 (373)
T d1ogmx2 1 LPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIE 80 (373)
T ss_dssp CCGGGSCCCCTTTEEECCSEEECTTTTCSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESCEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCEEECCCEEEECCCEEECCCCEEEECCCCCEEEEEEE
T ss_conf 98886589898846875310465244689888998994638387430474588738669636743776079857986798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~n~~i~giti~~s~~~~~~~~~~~~v~i~ 160 (373)
T d1ogmx2 81 YFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQ 160 (373)
T ss_dssp ECCSSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEESCCCSSEEEEEESCEEECCSSCCEEECSSSCEEEE
T ss_pred ECCCCEEEEECCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEECCCEEEEEECCCCEEEEE
T ss_conf 63765089971207838866632566543223346776567755899984227999677997899169987268759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~i~~~~~~~~n~dgi~~~~~~~i~~~~~~~gDD~i~~~s~~i~v~n~~~~~~~~~~~~~~g~~g~~i~nv~v~ni~v~ 240 (373)
T d1ogmx2 161 ISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVI 240 (373)
T ss_dssp EEEEEEECCCSTTCCCCBCCTTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 78999668877787005324878999528963887799657988999799978875247883667887631599915998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ni~f~nI~~~~~~~~~i~~~~~~~~~~~~i~nV~i~nI~~~~~~~~ 320 (373)
T d1ogmx2 241 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGT 320 (373)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEEEEEEEEEEECSSBCEEEEECCSEEEEEEEEEEEEETTCBCCSTTCT
T ss_pred CCEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 85611220033434443322112100689869992899919998753676999876788888332189984499804571
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~Ni~i~~~~i~~~n~~~~~~~~~~~~g~~~~~~~~~ 373 (373)
T d1ogmx2 321 GESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS 373 (373)
T ss_dssp TCEEECCCTTCCEEEEEEEEEETTEECCTTTCSTTSSSCEEECGGGTTTCEEC
T ss_pred EEEEEECCCCCCCCEEEECEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 66875014687388578676991969864777777321678777504531229
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Probab=100.00 E-value=0 Score=28103.05 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~D 80 (373)
T d1miqa_ 1 HLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFD 80 (373)
T ss_dssp CEEEEEEEECHHHHHHHHSCHHHHHHHHHHHHHHHTTSCTTCCCCCBTTBCCCGGGTBCEEEECCCEETTTTEECCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEE
T ss_conf 92233303582467787766666889887644331134232122256787687255169789999998799989999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 TGSs~lWv~~~~C~~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1miqa_ 81 TGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPI 160 (373)
T ss_dssp TTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTH
T ss_pred CCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCC
T ss_conf 99625189879999743468982389889853388963899928817999999788897674267668999840356753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~~~~~w~ 240 (373)
T d1miqa_ 161 YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQ 240 (373)
T ss_dssp HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCEEEEEECCCCCEEE
T ss_conf 23566563566444433578854301124443225653278871367888715642677830114424687114552489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~P~itf~f~g~~~~l~p~~y~ 320 (373)
T d1miqa_ 241 IDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYM 320 (373)
T ss_dssp EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSE
T ss_pred EEEEEEECCEECCCCCEEECCCCCEECCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEE
T ss_conf 99998778675487416862677213157899999999839755068970675344688863999999999998889906
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak~ 373 (373)
T d1miqa_ 321 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 373 (373)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCEEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCC
T ss_conf 88996799899999998888999899717943769999999999999998079
|
| >d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Amide receptor/negative regulator of the amidase operon (AmiC) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=28101.55 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~pvIG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~GGi~Gr~i~l~~~D~~~~~~~a~~~a~~Li~~~~V~aiiG~~~S~ 80 (373)
T d1qo0a_ 1 RPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 80 (373)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHTTCBTTBCCEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_conf 98899972886842655299999999999998850996886889999769999999999999999608966998041333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~av~~~~~~~~vp~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~~vaii~~d~~~g~~~~~~~~~~~~~ 160 (373)
T d1qo0a_ 81 TRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQ 160 (373)
T ss_dssp HHHHHHHHHHHHTCEEEECSCCCCCCCCTTEEECSCCGGGTHHHHHHHHHHHSCSEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 24456899997199678223354345687336604671787777888987515742553467764037888653111220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~G~~vv~~~~~~~~~~~~d~~~~~~~i~~~~pd~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (373)
T d1qo0a_ 161 HGGTVLEEIYIPLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDV 240 (373)
T ss_dssp TTCEEEEEEEECSSCCHHHHHHHHHHHHHHTCSEEEEECCSTTHHHHHHHHHHHHCSSCCCCEEESSCCHHHHTTSCHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 36733678971676442046799999875188732320235047779999998457656640125545248776444443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~aY~a~~~~a~Ai~~ag~~d~~~i~~aL~~~~~~~~~G~ 320 (373)
T d1qo0a_ 241 AEGQVVVAPYFSSIDTPASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGNWRVEDVQRHLYDIDIDAPQGP 320 (373)
T ss_dssp HTTCEEEESCCTTCCSHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHSSCCEEETTEE
T ss_pred HCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCEE
T ss_conf 05720102442000027789999999987398788770799999999999999998689999999999855953078365
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
=
T Consensus 321 i~f~~~~~~~~~~~~i~q~~~dg~~~vv~~~~~~v~p~p~~~~~~~~~w~~~~ 373 (373)
T d1qo0a_ 321 VRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASM 373 (373)
T ss_dssp EEECTTTSBEEBCCEEEEECTTSCEEEEEECSSCBCCCTTCCSCCGGGGGGGC
T ss_pred EEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99838998346866999993699589996069836799974888865455569
|
| >d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28100.48 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~s~~~~~~l~~~~~dwa~~hGl~~~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~n~L~~~vS~D~~~~~~f 80 (373)
T d1m0wa2 1 PSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSY 80 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCEECCTTGGGCTTEEEECCEESSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 98799999999999999971947436877789886145787952776888999999999999999999997240426899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 L~~~l~~~~~~D~~Ft~~L~~i~~~v~~~g~~~~q~i~Lgl~RSDYMld~~~~~~~~KQVE~NTIa~sfg~ls~~v~~lH 160 (373)
T d1m0wa2 81 LHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRLGIFRSDYLIDKKKGTEQIKQVEFNTVSVSFAGLSEKVDRLH 160 (373)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHTSCCSSCCCCCEEEEEEEEEEEEEETTEEEEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHH
T ss_conf 99998767405889999999999999854446243258744301321477666523441230020020121888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~l~~~~~~d~~~~~~~d~~~~~~~~~~~le~~~a~~~~~~l~g~KKvQq~La~pgvLe~Fl~d~~~~~~lr~tF~~ly~ 240 (373)
T d1m0wa2 161 SYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYP 240 (373)
T ss_dssp HHHHHTTSSCTTSCSSCGGGBCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTTSHHHHTTTCCCHHHHHHHHTTCCCEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 99985557788775016886545155189886666466776467652672103668898867988999999998504786
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Ld~~~~g~~~~~~Al~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~e~~ayILMerI~Pp~~~~~~~~r~~~~~~~~ 320 (373)
T d1m0wa2 241 LDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEP 320 (373)
T ss_dssp CSSSHHHHHHHHHHHHCGGGEEEEESSCSSCCCEEGGGHHHHHHTSCGGGGGGEEEEECCCCCCBCSCCEEETTEEECCC
T ss_pred CCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECC
T ss_conf 78502128999998619153897455557665401479999987478444113307854179988875997299011277
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------6
Q 001706 633 ----------------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~vSELGifG~~l~~~~~v~~N~~~G~LlRTK~~~~nEGGVaaG~g~lDS~~L~ 373 (373)
T d1m0wa2 321 IISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDSIILY 373 (373)
T ss_dssp BEEEEEEEEEEEECSSCEEEEEEEEEEEEEECCEEETTEEEECCEEECCEEEC
T ss_pred EEECCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCEECCEEECCCHHCC
T ss_conf 32033041899978977997165028896279988876810354223422009
|
| >d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Queosine tRNA-guanine transglycosylase species: Zymomonas mobilis [TaxId: 542]
Probab=100.00 E-value=0 Score=28031.99 Aligned_cols=1 Identities=0% Similarity=-1.723 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~Fei~~~d~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gglh 80 (372)
T d1r5ya_ 1 RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLH 80 (372)
T ss_dssp CCSCEEEEEEEETTEEEEEEEETTEEEEESEEECBCTTSSCTTCCHHHHHHTTCSCEEEEHHHHHHTTCHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCEEEEEEEECCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHCCCHH
T ss_conf 99607999965585004899979977679978754778808847999999728988833188887587617877426513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~f~~~~~~iltdsGg~q~~sl~~~~~~~~~gv~f~s~~~g~~~~ltpe~~i~~q~~ig~DI~~~Ldd~~~~~~~~~~~~~ 160 (372)
T d1r5ya_ 81 SFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAAS 160 (372)
T ss_dssp HHHTCCSCEEEECSHHHHC-CC-CCEEETTEEEC---------CBCHHHHHHHHHHHTCSEEECCCCCCCSSCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 34204565200247654323223455577885353226872111000779999985088467522446653101678899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~rt~~w~~~~~~~~~~~~~~~~~~~lfgivqGg~~~dlR~~s~~~l~~~~~~G~aiGgl~~~~~~~~~~~~v~~~~~~ 240 (372)
T d1r5ya_ 161 SMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPM 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999999999875055667666321131541265688889999986213732122445675067788899850200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 Lp~~kPr~l~Gvg~P~~il~~V~~GvD~FD~~~p~r~Ar~G~alt~~g~~~l~~~~~~~d~~Pl~~~C~C~~C~~~sraY 320 (372)
T d1r5ya_ 241 LPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAY 320 (372)
T ss_dssp SCTTSCEEETTCCSHHHHHHHHTTTCCEEECSHHHHHHHTTEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHHCCHHH
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHH
T ss_conf 12011022047898789888360589954543113111136157259832321232335689869898992325159999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
-
T Consensus 321 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~ 372 (372)
T d1r5ya_ 321 IHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF 372 (372)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9877638836899999999999999999999999985999999999999649
|
| >d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: HDAC homologue species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=28030.27 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~k~~li~~~d~~~~~~g~~HPe~p~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~~ 80 (372)
T d1c3pa_ 1 KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVPKG 80 (372)
T ss_dssp CCEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCCTT
T ss_pred CEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 90899968201587897843959799999999999769987880771898999999871899999999974544467522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~p~~~~~~~~a~~~~g~~~~a~~~~~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiaa~~l~~~~~~R 160 (372)
T d1c3pa_ 81 AREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKGFKR 160 (372)
T ss_dssp HHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 31014688767878889999998753358897653224542241246534421024313640460999999998744674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 V~ivD~DvHhGnGtq~if~~d~~V~~~SiH~~~~~~~p~~tG~~~e~G~~~g~g~~~NiPL~~g~~D~~y~~~~~~~l~p 240 (372)
T d1c3pa_ 161 ILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEI 240 (372)
T ss_dssp EEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 47874345677762577761477543000257777788888772236787665412414488655628999999986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~f~Pd~IvvsaG~D~~~~Dplg~l~lt~~~~~~~~~~~~~~~~~~~~vleGGY~~~~~a~~~~~~~~~l~g~~~~~~ 320 (372)
T d1c3pa_ 241 VKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEK 320 (372)
T ss_dssp HHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99866976899978816677686568868888999999999985899699975878588999999999999829999845
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 372 (372)
T d1c3pa_ 321 LNNKAKELLKSIDFEEFDDEVDRSYMLETLKDPWRGGEVRKEVKDTLEKAKA 372 (372)
T ss_dssp CCHHHHHHHHHSCCCCSSTTCCCGGGGGCSSCCCCCCCCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 6877887631588777424467033200247855535778899999998509
|
| >d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA polymerases {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage T4 [TaxId: 10665]
Probab=100.00 E-value=0 Score=28029.53 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~fytnv~~~gn~il~rg~~~~G~r~~~~~~f~Py~y~~~~~~~~~ksl~G~~v~~v~f~s~~~~r~~~~~~~~~~~~~~ 80 (372)
T d1noya_ 1 DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFPSMKDARDWMKRMEDIGLEAL 80 (372)
T ss_dssp CCEEEEEEEETTEEEEEEECTTSCEEEEEEECCCSEECGGGGTCSSCTTTTCCCCCEECSSHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEE
T ss_conf 98661369999999999996599799999656058999858997858359908877857999999999997256663464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~die~~~~~~~~~~~~~~~i~~I~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (372)
T d1noya_ 81 GMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDA 160 (372)
T ss_dssp HHHHHHHHHHHHHTCSCCCCCGGGCCEEEEEEEECCSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCSSCCCCCCCH
T ss_pred ECCCCCEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 02343413312316545556623225773022002346688631010000222144159879999962656566556555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~E~~lL~~F~~~~~~~dPDii~G~N~~~FD~pYL~~R~~~~~~~~~~~~~~~ 240 (372)
T d1noya_ 161 KLAAKLDCEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSP 240 (372)
T ss_dssp HHHHSCGGGTCCCCCHHHHTTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGST
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 55433222346665545668759998099999999999999872888799970678616799999987456310111221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~sy~L~~v~~~~l~~~K~~~~~~l~~~~~~d~~~l~~Yn 320 (372)
T d1noya_ 241 IGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYN 320 (372)
T ss_dssp TSCEEEEECCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCCCCCCSSCGGGHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCCCCEEEEECCCEEEEEEHHHEECCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCHHHHHEEC
T ss_conf 26521001101356522564033148975101200002330024344310001146777742249999874925702201
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
.
T Consensus 321 i~D~~L~~~L~~kl~~i~~~~~la~~~gvp~~~v~~~~~~~~~~~~~~l~~~ 372 (372)
T d1noya_ 321 IIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSLKGE 372 (372)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTCCGGGGGCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 9988999999998757999999999989398993749999999999986259
|
| >d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Antitrypsin, alpha-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28028.93 Aligned_cols=1 Identities=0% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1qlpa_ 1 FNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT 80 (372)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 93220769999999999986129798299878999999999998546799999999709998778689999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~l~~~n~i~~~~~~~l~~~f~~~~~~~f~~~~~~~df~~~~~~~~~iN~wv~~~T~g~i~~~~~~~~~~t~l 160 (372)
T d1qlpa_ 81 LNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVF 160 (372)
T ss_dssp HSCSSCCCCEEEEEEEEEETTCCBCHHHHHHHHHTSCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCSCCCCCCTTCCE
T ss_pred HHCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 53247614451010023316776478999999987275241455444699999999999998579875545678974155
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~f~~~~~~~l~~~~~~lp~~~~~~~~il~~~~~~l~~ 240 (372)
T d1qlpa_ 161 ALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQH 240 (372)
T ss_dssp EEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEECTTCHHH
T ss_pred HHHHHHEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHH
T ss_conf 54323213043113566210445654036885489750000153111014667869995256777259999778679899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~~L~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGl~~~F~~~ad~~~i~~~~~l~vs~v~q~~~i~v~E 320 (372)
T d1qlpa_ 241 LENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDE 320 (372)
T ss_dssp HHHHCCHHHHHHHHHCCCCEEEEEEEECEEEEEEEEHHHHTGGGTCCGGGSTTCCCTTTBSSSCCCCCEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCHHHHHHHCCCHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEEECC
T ss_conf 98764599999998735644789998789985211577877755946554225453176788981566378899999878
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~Gteaaa~t~~~~~~~s~~~~f~~drPFlf~I~~~~t~~iLf~G~v~~Pt~~ 372 (372)
T d1qlpa_ 321 KGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK 372 (372)
T ss_dssp CSSSSCCCCCCCCCCSSCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred CCCCHHHHHEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 8400323210102357899759926998999999899939999992799899
|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Germin/Seed storage 7S protein domain: Oxalate decarboxylase OxdC (YvrK) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28027.63 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~g~~~~gp~~~~~~~~~~d~~~~~~td~g~~~~~~~~f~~~~~~~~~gg~~r~~~~~~lp~~~~~a~~~~~L~ 80 (372)
T d1j58a_ 1 PQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKFSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLK 80 (372)
T ss_dssp CCSEETTEECCCCSCCCHHHHHHCHHHHSCCTTCBSCCCCCEECGGGSCCEEETTEEEEEECTTTCTTCSSCEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHEEEEEC
T ss_conf 98604899998889877666531864458997766755105642133544236797147864443800331100589988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 pga~~~pH~H~~ae~~yVl~G~~~vt~Vd~~G~~~~~~l~~GDv~~~P~G~~H~i~n~~dg~e~l~vf~~~~~~~~~~f~ 160 (372)
T d1j58a_ 81 PGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQ 160 (372)
T ss_dssp TTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEE
T ss_pred CCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEE
T ss_conf 99676873637643899995779999994899489988536988998999779997179995899997788866653043
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~p~evLa~af~v~~~~~~~i~~~e~~i~~~~~p~~~~~~~~~~~~g~~~~~~~~~l~~q~P~~~~gG~~~~~d 240 (372)
T d1j58a_ 161 LTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIAD 240 (372)
T ss_dssp HHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCEECSSEEEEEES
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
T ss_conf 10121359878998761999899863431223312456887423454147788998763230224688415774679926
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~fp~~~~is~~~~~l~PG~~~~~H~Hp~a~E~~yvl~G~g~v~v~~~~g~~~t~~l~~GDv~~iP~g~~H~i~N~g~e 320 (372)
T d1j58a_ 241 STNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDE 320 (372)
T ss_dssp TTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSS
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCC
T ss_conf 33477667506999998899645887799972999999790999998579806899825985899899974999987999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~l~~l~vf~s~~~~~i~~~~~l~~~P~~vv~~~~~~~~e~~~~l~~~k~~vv 372 (372)
T d1j58a_ 321 PLVFLEIFKDDHYADVSLNQWLAMLPETFVQAHLDLGKDFTDVLSKEKHPVV 372 (372)
T ss_dssp CEEEEEEESSSSCCCEEHHHHHHTSCHHHHHHHHTCCHHHHTTCCSSCCSBC
T ss_pred CEEEEEEECCCCCCEEEHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 8899999789996545687876549999999885969999998875687669
|
| >d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28027.15 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~tp~~~gfrmPaEwe~~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~Ia~~e~V~vl~~~~~~~~~~~~~~~nV~~~~ 80 (372)
T d1vkpa_ 1 RESPAEHGYYMPAEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPEDIRVVE 80 (372)
T ss_dssp CCCGGGGTCBCCCTTSCEEEEEECCCCCTTTSTGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTTSEEEE
T ss_pred CCCHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEE
T ss_conf 97935549976898563615999868998621345556899999999997389849999797999999975746728999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~dD~W~RD~GPifv~~~~~~~~~~~~~~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~lvlEGG 160 (372)
T d1vkpa_ 81 MSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGG 160 (372)
T ss_dssp CCCSSCCHHHHSCEEEECCC-------CCSEEEEEEECCTTTHHHHSSBSCCTTHHHHHHHHHHHHTCCEEEEEEECCGG
T ss_pred CCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 15898788614877998088642334678557860201366655555421345677999987412168744567166389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~ie~dG~GtlltTe~clln~nRNP~~sk~~ie~~Lk~~lGv~~viwl~~g~~~~DdTdGHID~~arFi~~~til~~~~~d 240 (372)
T d1vkpa_ 161 SIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDD 240 (372)
T ss_dssp GEEECSSSEEEEEHHHHTCTTTCTTSCHHHHHHHHHHHHCCCEEEEESCCCTTCTTTTCCGGGTEEEEETTEEEEEECCC
T ss_pred CEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCEEEEEECCC
T ss_conf 77989996299756782077889998999999999986297559997670027988765500058971799079873288
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~y~~~~~~~~~L~~~~d~~g~~~~ii~lp~p~~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (372)
T d1vkpa_ 241 ETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAP 320 (372)
T ss_dssp TTSTHHHHHHHHHHHHHTCBCTTSCBCEEEEEECCSCCBCCHHHHHTSCCCSSBCCCCTTCBCCCCTTCCEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEC
T ss_conf 76855899999999999887505884317983034540003200145334666554568988655347999999999995
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~ygd~~~D~~A~~~l~~~fP~r~Vi~Id~~~~i~~~gG~iHCiT~q~Pa~~~ 372 (372)
T d1vkpa_ 321 QFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPT 372 (372)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTSEEEEETTTHHHHTTTCCTGGGEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 7989430799999999988898799827889998579853575777779999
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28024.75 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1teda_ 1 AQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPAT 80 (372)
T ss_dssp CCCCCCCCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSC
T ss_pred CCCCCCCCCCEEEEEEEEEECCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCC
T ss_conf 99897999844899988996799178399999999860678177899999998359863514516543461445414887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 160 (372)
T d1teda_ 81 IRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNA 160 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
T ss_conf 88888877737999999999999997599988998899964689888668899876514687625766004674179999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 L~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (372)
T d1teda_ 161 LGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTE 240 (372)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCT
T ss_pred HHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999998559976521653112002104777613565655413632047750477645567750587035642168876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l 320 (372)
T d1teda_ 241 DGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 320 (372)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 55456778776320014777999998889999987876399878742232247659999999998198978816568888
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------6
Q 001706 633 ---------------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~~ 372 (372)
T d1teda_ 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR 372 (372)
T ss_dssp HHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECCC
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHEEECC
T ss_conf 4047748879999999999838878899889999995899589876325229
|
| >d1mkfa_ b.116.1.1 (A:) Viral chemokine binding protein m3 {Murid herpesvirus 4, MuHV-4 [TaxId: 33708]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Viral chemokine binding protein m3 superfamily: Viral chemokine binding protein m3 family: Viral chemokine binding protein m3 domain: Viral chemokine binding protein m3 species: Murid herpesvirus 4, MuHV-4 [TaxId: 33708]
Probab=100.00 E-value=0 Score=27958.18 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 hssgvstqsvdlsqikrgdeiqahcltpaetevtecagilkdvlsknlhelqglcnvknkmgvpwvsveelgqeiitgRL 80 (371)
T d1mkfa_ 1 HSSGVSTQSVDLSQIKRGDEIQAHCLTPAETEVTECAGILKDVLSKNLHELQGLCNVKNKMGVPWVSVEELGQEIITGRL 80 (371)
T ss_dssp CCSEEEECCCCTTTSTTHHHHHHHHSSSCCSSTHHHHHHHHHHHHHCTTGGGGGCSEEEEEEEECEEEGGGTEEEEEECC
T ss_pred CCCCCCCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCC
T ss_conf 98774343323888445425665207821003677778899987642887751430244468846569884125500676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 P~Ps~~~~~~~~~vrVLV~AEs~tpee~P~~~~~A~~~m~T~~~~~~LsD~N~~F~s~~~~vW~i~i~k~~VD~~mLT~A 160 (371)
T d1mkfa_ 81 PFPSVGGTPVNDLVRVLVVAESNTPEETPEEEFYAYVELQTELYTFGLSDDNVVFTSDYMTVWMIDIPKSYVDVGMLTRA 160 (371)
T ss_dssp CCSSCCCCTTSCEEEEEEEEECCCCSSCCSSCCCEEEEEECSSCEEEECGGGEEEEETTEEEEEEEEEGGGSSTTCEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEECCEEEEEEECCHHEECHHHHHHH
T ss_conf 77755787667648999995179987880788765441044554785024643787400279999646001122143355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~FL~~~P~~k~T~mi~Y~~TFTWCGeigai~e~~~P~PS~~A~~PVC~~~~RY~~~kF~~~DGC~~Et~~~~~s~i~P~~ 240 (371)
T d1mkfa_ 161 TFLEQWPGAKVTVMIPYSSTFTWCGELGAISEESAPQPSLSARSPVCKNSARYSTSKFCEVDGCTAETGMEKMSLLTPFG 240 (371)
T ss_dssp EESSCCTTCEEEEEEEEETTEEEEEEEEEECTTSCCBCCSEEEEETTSSGGGGSSSTTTTTTTCCGGGTSCCEEECSCTT
T ss_pred HHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEECCCC
T ss_conf 67754767608998436565053403254368778997610038542004665347524136743000555640555578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~P~~qa~mNTC~C~~KY~~~~L~~~~~i~i~~ia~~~~~~~P~YVm~~YF~St~~N~~~~s~~L~~C~~~mtsH~G~~~~ 320 (371)
T d1mkfa_ 241 GPPQQAKMNTCPCYYKYSVSPLPAMDHLILADLAGLDSLTSPVYVMAAYFDSTHENPVRPSSKLYHCALQMTSHDGVWTS 320 (371)
T ss_dssp SCSSCEEEESTHHHHHHCSSCCCCCSCEEEEEEECGGGCCSCEEEEEEEECCCCCCTTSCCCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEE
T ss_conf 98440303532058882476577334188876225233467406788750666667668898644899998743673013
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~s~QCP~~~~~G~~q~VL~~~~~pt~~~~iVGvsi~~eGQq~Ri~Y~Gdh 371 (371)
T d1mkfa_ 321 TSSEQCPIRLVEGQSQNVLQVRVAPTSMPNLVGVSLMLEGQQYRLEYFGDH 371 (371)
T ss_dssp CCCSSCCEEEEECSSTTEEEEEECGGGGGGEEEEEEEETTEEEEEESSCCC
T ss_pred EECCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCC
T ss_conf 313557556730676068999982466764056999974700021012589
|
| >d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27957.10 Aligned_cols=1 Identities=100% Similarity=1.566 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 MnsfG~~lr~ttfGESHG~alg~vidG~PaG~~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtGsPI~ 80 (371)
T d1r53a_ 1 MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRPGQSKLSTPRDEKDRVEIQSGTEFGKTLGTPIA 80 (371)
T ss_dssp CCEECSSSEEEEECCTTSSEEEEEEECCCTTCBCCGGGTHHHHHTTCC------------CCCEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEE
T ss_conf 98776534898415478884489980508588838999999996459999998866899984899243208978455207
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~kyg~~d~~gggrsSaReTa~rvaaGaia~~~L~~~~gI~v~s~V~~IG~ 160 (371)
T d1r53a_ 81 MMIKNEDQRPHDYSDMDKFPRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE 160 (371)
T ss_dssp EEEEC-----------------------------------------CCCHHHHHHHHHHHHHHHHTTCCEEEEEEEEETT
T ss_pred EEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC
T ss_conf 88814532310010133324668741776764486533565415688899999999999999998489799999998611
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~~~~~~~d~~~~~~~~~~~~~~~~~~~~vrc~D~~~~~~m~~~I~~ak~~gDSlGGivev~~~gvP~GLG~p~fdkLda 240 (371)
T d1r53a_ 161 IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPCFDKLEA 240 (371)
T ss_dssp EECCCCTTCHHHHHHHHHCCHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEEEESCCTTCSBTTTBCHHH
T ss_pred EECCCCCCCHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH
T ss_conf 77154345612332214465655553196107886888999999999972599755089999970589877720044145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~LA~A~mSIpAVKgVEfG~GF~~a~~~GSe~nD~~~~~~~~g~~~~~tN~aGGi~GGiSnG~pi~~rva~KP~sSi~~~q 320 (371)
T d1r53a_ 241 MLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQ 320 (371)
T ss_dssp HHHHHHHTSTTBCCCEETTTTGGGGSCHHHHHCSBC--------CBCCCCSCSEETTEECSSCEEEEEEECCC-------
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 88887742410025650456117645562247762205788864245688777546764896069999857810046877
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~Tvd~~~~~~~~~~~gRhDpc~vpra~pV~Eam~alvlad~~L~~~~~d~~ 371 (371)
T d1r53a_ 321 KTATYDGEEGILAAKGRHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS 371 (371)
T ss_dssp ----------------CCCSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 547757978776106988981726548999999999999999998516789
|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=27955.05 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~rGL~gv~v~~T~Is~idg~~G~L~YRG~~i~dLa~~~sfEeVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 80 (371)
T d1aj8a_ 1 LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIM 80 (371)
T ss_dssp CCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99777998162686712768988799988769998646999999999977979899999999999997168988999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~p~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~a~~~~i~~~~~~~~~~~~~~~p~~~~~~a~~~l~~~ 160 (371)
T d1aj8a_ 81 EALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYML 160 (371)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHSTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 86114641267777776410110100124310146788899999999999999999837998879860056899987652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~g~~~~~~~~~~l~~~Lvl~aDHg~n~Stfa~r~vaSt~~d~~~a~~ag~~al~G~~hgga~~~~~~~~~~~~~~~~~~~ 240 (371)
T d1aj8a_ 161 HGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEE 240 (371)
T ss_dssp HSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 38878879999999999983677777620656654115775202888888871542011016799999985065420699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~v~~~l~~~~~i~GfGH~vy~~~DPRa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pNvd~~~~~l~~~lg~p 320 (371)
T d1aj8a_ 241 WFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIP 320 (371)
T ss_dssp HHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCC
T ss_pred HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 99998624776544472211466606889999887630003568999999999987421798838188999999983998
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~lf~~~R~~G~~AH~~Eq~~~~~l~RP~~~YvG~~~~~~~~i~~r~ 371 (371)
T d1aj8a_ 321 IELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHCC
T ss_conf 566669999999999999999998679973855401699899987767659
|
| >d1to6a_ c.141.1.1 (A:) Glycerate kinase GlxK {Neisseria meningitidis, (serogroup A) [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerate kinase I superfamily: Glycerate kinase I family: Glycerate kinase I domain: Glycerate kinase GlxK species: Neisseria meningitidis, (serogroup A) [TaxId: 487]
Probab=100.00 E-value=0 Score=27954.79 Aligned_cols=1 Identities=0% Similarity=0.237 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 MkiliApDsFKgslsA~ea~~ai~~g~~~~~p~~~~~~~P~aDGGEGt~dal~~~~~g~~~~~~v~gplg~~v~a~~~~~ 80 (371)
T d1to6a_ 1 MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDGGEGTVDAIRHSLDLEEKCLQVTGSFGQKEVMRYFQK 80 (371)
T ss_dssp CEEEECCCCBTTTBCHHHHHHHHHHHHHHHCTTCEEEECCCCSSSTTHHHHHHTTSCCEEEEEEEECTTSSEEEEEEEES
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECC
T ss_conf 90999943888862899999999999998599988999730648543999999863997999999899998157899637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~tAvIE~A~asGL~l~~~~~r~p~~~tT~G~GelI~~Al~~G~~~iilglGGSAT~DgG~G~L~ALG~~f~D~~g~~l~ 160 (371)
T d1to6a_ 81 EQLALFEVADLVGLGKIPLEKRNPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP 160 (371)
T ss_dssp SSEEEEETHHHHBGGGSCTTSCCTTSCCCHHHHHHHHHHHHTTCCEEEEEECSBCCCSTTHHHHHTTTCEEECTTSCBCC
T ss_pred CCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCC
T ss_conf 87543016663676303887777112246119999999997699769997158636616789999614536888999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~g~~L~~i~~id~~~~~~~l~~v~~~ia~DV~npL~G~~GAa~vfgpQKGa~~~~v~~le~~l~~~a~~~~~~~~~~~g 240 (371)
T d1to6a_ 161 ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFEVVDQAIQDFYEKVSPATLKLKG 240 (371)
T ss_dssp SSGGGGGTCCEEECSSCCCCCTTCEEEEEESCCCCSSSTTSHHHHHSGGGTCCGGGHHHHHHHHHHHHHHHCGGGGGCTT
T ss_pred CCCHHHHHHHCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC
T ss_conf 86153675002662368711342849999556765547878645650445887899999999999999984311015678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~gaAGG~~~~l~~~l~a~~~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~QSl~GK~p~~va~~ak~~~pviai~G~v~ 320 (371)
T d1to6a_ 241 AGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLV 320 (371)
T ss_dssp TTTTTTHHHHHHHHSCCEEEEHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEEESEEC
T ss_pred CCCHHHHHHHHHHHHCCEECCCHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 63102578999999588846509999988599978356998997887552321265767999999767998899977557
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~Gi~~~~si~~~~~~l~~a~~~a~~~L~~~a~~i~r~l~~~~~ 371 (371)
T d1to6a_ 321 EDLPSLPFENIQAAFSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI 371 (371)
T ss_dssp TTCCCSSBTTEEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 886678754962999758899999999998999999999999999842379
|
| >d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: HybD-like family: Germination protease domain: Germination protease species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=0 Score=27954.64 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~l~~y~iRTDLAlEa~E~~~e~~~~~~~~~ei~GV~~~e~~~~~ikiT~V~I~e~Ga~~mgKp~G~YiTiEap~l 80 (371)
T d1c8ba_ 1 MEKELDLSQYSVRTDLAVEAKDIALENQPKPNNQSEIKGVIVKEKEEQGVKISMVEITEEGAEAIGKKKGRYVTLESVGI 80 (371)
T ss_dssp CCCCCCCCCCCCCCCCTTHHHHHHHHHCCC---------CCCSEEEEEEEETTEEEEEEEECHHHHTTTTSCCEEEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCHHHHHHCCCCCCEEEEECCCC
T ss_conf 98655521143537878988998865320113467668769888862986899999782689985899851799846877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~D~~~~~e~~~~v~a~~l~~l~~~~~~~~~~~vLVVGLGN~~VTPDALGP~vv~~l~VTRHL~~~~p~~~~~g~r~Vs 160 (371)
T d1c8ba_ 81 REQDTEKQEEAMEEVFAKELNFFIKSLNIPDDASCLVVGLGNLSVTPDALGPKAVDNLLITRHLFELQPESVQDGFRPVS 160 (371)
T ss_dssp CCCSSSSSSHHHHHHHHHHHHHHHHHTTCCTTCCEEEEECSCSSSGGGCHHHHHHTTCCCCHHHHHHSCCSSCSSCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHEECCEEEEHHHHHHCCHHHCCCCCEEE
T ss_conf 75678899999999999999999863178988817999688877786563701113363343045547254507871256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 aIaPGVmg~TGiET~EIIkgiVek~kPD~VIaIDALAaRs~~Rln~TIQIsDTGI~PGSGVGN~R~~l~~etLGVPVIAI 240 (371)
T d1c8ba_ 161 AIVPGVMGMTGIETSDIIFGVVKKVNPDFIIAIDALAARSIERVNATIQISDSGIHPGSGVGNKRKEISYETLGIPVIAI 240 (371)
T ss_dssp EECSGGGCCCSSCHHHHHHHHHHHHCCSEEEEEEEECCSSGGGSSSEEEEETTCBCSCSSSSCCCCBSSSCCC-------
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
T ss_conf 88587550344249999999987518989999601013752333564786677858887767555637987829988997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 GVPTVVdAatI~~Dtid~~~~~~~~~~~e~~~~s~~l~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ek~~Li 320 (371)
T d1c8ba_ 241 GIPTVVDAVSITSDTIDFILKHFGREMKEQGKPSKSLLPSGMTFGEKKKLTEDDLPNEEQRQTYLGMIGTLPDEEKRRLI 320 (371)
T ss_dssp --CCCEEEEEEECCEESCCCHHHHTTTTTCC---------------------------------CCCCSSCCCTTHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 68806601998789999999987543201346531113332333422222222343112204688776246889999999
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~EvL~P~~~~l~VTPKeID~~I~~~s~iIs~giN~ALhp~i~~e~~~~y~~ 371 (371)
T d1c8ba_ 321 HEVLAPLGHNLMVTPKEVDMFIEDMANVVAGGLNAALHHEVDQENFGAYTH 371 (371)
T ss_dssp HHHTCSSCTTEEEEETTHHHHHHHHHHHHHHHHGGGGSCCCCSCCCCSSCC
T ss_pred HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 997572479655675738999999999999898898677888778764339
|
| >d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27954.44 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~d~y~~lr~~w~~~~~G~~~~~~~d~~~~~~~~~l~~~a~~~~~~~~~~~~~~~lw~dl~~~~~~~~~~~~~~rL~~mA 80 (371)
T d1n7oa1 1 VKDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMA 80 (371)
T ss_dssp CCSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHSCCSSSCSSSCGGGCCTTSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96489999999999863745677687899999999999999999872135677777789987775147999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ay~~pgs~lY~d~~l~~~I~~al~~l~~~~y~~~~~~~gNWw~~~Ig~P~~l~~~lill~~~l~~~~~~~~~~~i~~~~ 160 (371)
T d1n7oa1 81 KQVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFV 160 (371)
T ss_dssp HHHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99859998553699999999999999997089888888898303640758999999988311169999999999999867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG 240 (371)
T d1n7oa1 161 PDPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYG 240 (371)
T ss_dssp CCTTEECTTSSSCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGGSCCSSSSEECTTSCEEETTTEECTTTHH
T ss_pred CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEECCCCEECCCCEECCCCCH
T ss_conf 88212035677866064116999899999999986799999999999887741102688440377601257622167513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~G~~~d~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~ 320 (371)
T d1n7oa1 241 NVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMS 320 (371)
T ss_dssp HHHHHHHHHHHHHHTTSSSCCCHHHHTHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799888897899999999995433010555015557886225788666414899999999985149
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~iK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~i~~~p~ 371 (371)
T d1n7oa1 321 EGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPR 371 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSCGGGGCCSHHHHHHHHHHHHCTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999966875452225345789999999865898898998
|
| >d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus agalactiae [TaxId: 1311]
Probab=100.00 E-value=0 Score=27954.41 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~d~y~~l~~~w~~~~~G~~~~d~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~lw~dl~~~~~s~~~~~~~~rL~~mA~ 80 (371)
T d1f1sa1 1 EDNFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAKNIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAK 80 (371)
T ss_dssp CSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSCGGGCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 97699999999998638766786677899999999999999998612676656667899977752589999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 aY~~pgs~ly~d~~l~~~I~~aL~~l~~~~y~~~~~~~~~~NWW~~eIg~P~~l~~~lill~d~l~~~~~~~~~~~i~~~ 160 (371)
T d1f1sa1 81 QITNPHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTDAEIKTYTDPIEHF 160 (371)
T ss_dssp HHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCTTSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 98499985547999999999999999983899876688989861123175799999998720015999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSfiqH~~v~Y~G~Y 240 (371)
T d1f1sa1 161 VPDAEYFRKTLVNPFKALGGNLVDMGRVKIIEGLLRKDNTIIEKTSHSLKNLFTTATKAEGFYADGSYIDHTNVAYTGAY 240 (371)
T ss_dssp CCCTTEESTTSSCCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCCBSSSSEEBTTSCEEETTTEECTTTH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHCCCCEECCCCC
T ss_conf 78813322567886636522699999999999998289999999999876561103578723047661004670006762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 G~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~g~~~~~v~GR~IsR~~~~~~~~g~~~~~~~~~l~~~ 320 (371)
T d1f1sa1 241 GNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISREAASSHAAAVEVLRGFLRLANM 320 (371)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 39999999999999767988888789999999999700456357643565677622478876632799999999987334
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~vK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~I~~~p 371 (371)
T d1f1sa1 321 SNEERNLDLKSTIKTIITSNKFYNVFNNLKSYSDIANMNKLLNDSTVATKP 371 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHCCSSCGGGGCCSHHHHHHHHHHHHCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 989999999999999984587644100645599999999985578888898
|
| >d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Trichoderma reesei, Endoglucanase I [TaxId: 51453]
Probab=100.00 E-value=0 Score=27948.62 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 QQ~Gt~t~E~HP~ltwq~CT~~ggCt~~~g~vV~Danwrw~H~~~~~~c~~gn~~~~~lCpd~~tCa~nC~ldgaDY~~~ 80 (371)
T d1eg1a_ 1 EQPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDANYNSCTVNGGVNTTLCPDEATCGKNCFIEGVDYAAS 80 (371)
T ss_dssp CEECSSSCCCCCBCCEEEEETTTEEEEECCEEEECGGGSCEECTTCCBSEETTEECTTTCSSSHHHHHHCEECCCCTTTT
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887767548851447515899827723569980573202006986543388655234887566776246557763675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 GVttsG~sltL~~~~~~~~~~~~~vGsRvYLl~~d~~Yqmf~Llg~EftFdVD~S~lpCGlNgALYfveM~adGg~s~~n 160 (371)
T d1eg1a_ 81 GVTTSGSSLTMNQYMPSSSGGYSSVSPRLYLLDSDGEYVMLKLNGQELSFDVDLSALPCGENGSLYLSQMDENGGANQYN 160 (371)
T ss_dssp TEEECSSEEEEESCEECSSSSEECCCCEEEEECTTSSBCCBCCTTSEEEEEECTTSCCTTEEEEEEEECCCTTTTCCSSC
T ss_pred CEEECCCCEEEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 26951884789999824766532023327997588837888726971688864478875223366665226568966667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~aGA~YGtGYCDAQCp~~~w~~g~~~~g~~G~CC~EmDIwEANs~A~a~TpH~C~~~~CD~~GC~~NpYR~g~~~fyG~G 240 (371)
T d1eg1a_ 161 TAGANYGSGYCDAQCPVQTWRNGTLNTSHQGFCCNEMDILEGNSRANALTPHSCTATACDSAGCGFNPYGSGYKSYYGPG 240 (371)
T ss_dssp CCGGGGTCCCCCTTCCBCSEETTEECTTCCBCCCCEEEEEEECSSCBCBEEECBCSSCBCSSCCCBCTTTTTCTTTSSTT
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66663675323166873332136677578753035401015454134202434568741888867774555786211489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~tVDT~k~fTVVTQF~t~~~t~~G~LtEIrR~YVQ~GkvI~n~~~~~~~~~~~~~~~~~ggl~~mg~al~rGmVLv~SlW 320 (371)
T d1eg1a_ 241 DTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQNGVDIPSAQPGGDTISSCPSASAYGGLATMGKALSSGMVLVFSIW 320 (371)
T ss_dssp SSSCTTSCEEEEEEEEETTSSTTSCEEEEEEEEEETTEECCCSSTTCEEECCCSGGGGGTTTHHHHHHHHHCBEEEEEEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEE
T ss_conf 63026897389988665898664434477579997998902776566644454442336889999888608869999979
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 dd~~~~M~WLDs~~~GpC~~~~g~p~~ve~~~p~a~V~~SNIKfG~I~ST~ 371 (371)
T d1eg1a_ 321 NDNSQYMNWLDSGNAGPCSSTEGNPSNILANNPNTHVVFSNIRWGDIGSTT 371 (371)
T ss_dssp ECTTTTTHHHHBGGGCSBCTTTTCHHHHHHHCTTCEEEEEEEEEESTTTCC
T ss_pred ECCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCC
T ss_conf 279998523058988888888898668623289977998727583787889
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=100.00 E-value=0 Score=27947.50 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~p~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G~~n~~~aD~~v~~a~~n 80 (371)
T d1r85a_ 1 KPHISALNAPQLDQRYKNEFTIGAAVEPYQLQNEKDVQMLKRHFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKAN 80 (371)
T ss_dssp CCCCBGGGSCCHHHHHTTTCEEEEEECGGGGGCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99664255664999860578387843755547988999999866900326467634124779925838899999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 gi~vrGH~LvW~~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g~I~~WDVvNE~~~~~~~~r 160 (371)
T d1r85a_ 81 GMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDDIKYWDVVNEVVGDDGKLR 160 (371)
T ss_dssp TCEEEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEESCBCTTSSBC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 99787767786233354101256666444445422333699999999999999999974897528998731106998733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~~~~~i~ 240 (371)
T d1r85a_ 161 NSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIE 240 (371)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf 37522115858999999999986687546665145644440258999999999977997441433412367998889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~~a~~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D~~sW~~~~ 320 (371)
T d1r85a_ 241 KTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDSR 320 (371)
T ss_dssp HHHHHHHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTTSCGGGGG
T ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99999997399237866674167776445766542328999999999999999999638974599986898797446788
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLlfD~~~~pKpAy~ai~d~~ 371 (371)
T d1r85a_ 321 ADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAIIDHK 371 (371)
T ss_dssp CCEEECTTSCEECCTTSCCSEEETTCSCCCCSSBCTTSBBCHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 865435545533222222222235677788734689988977999986349
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27943.16 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp CEEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEE
T ss_conf 95789998838999989999999994889899998889978999995588998889999799999999979993999862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s 160 (371)
T d1k8kc_ 81 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160 (371)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 03321100122322110001111111211000002576302544203343311100101112221111111111100013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 161 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEE
T ss_conf 47679998401576431001221111111101124404766747898751233210000147860588641012100000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (371)
T d1k8kc_ 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 320 (371)
T ss_dssp CSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEE
T ss_conf 14665203654699979999819926787760898628872020676542124622001685065205871245566141
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~~~~~~l~~~ 371 (371)
T d1k8kc_ 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 371 (371)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHHCTTCCCC
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCEECC
T ss_conf 255569889999948998656799999189939999698684653587639
|
| >d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Spore coat polysaccharide biosynthesis protein C species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27951.22 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~~~~~~p~~~~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~ 80 (371)
T d2fnua1 1 KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP 80 (371)
T ss_dssp CCEESCCCCCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred CEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 92067899899999999999981898668977999999999997829399982689999999999544579977052013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga 160 (371)
T d2fnua1 81 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGS 160 (371)
T ss_dssp SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC
T ss_conf 44332200022058632123332223221012333046200001123445653334532121102220011314441586
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~ 240 (371)
T d2fnua1 161 EYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS 240 (371)
T ss_dssp EETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 01030478643222335566534320154578762122200000012101122322222311256510033145555544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~ 320 (371)
T d2fnua1 241 QLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQ 320 (371)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGG
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCC
T ss_conf 43211210334443310001212223333332233333333333322222221067999999999879984144765112
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------6
Q 001706 633 --------------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~ 371 (371)
T d2fnua1 321 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 371 (371)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 898884266689989999984959896888889999999999999999748
|
| >d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Peptidylarginine deiminase Pad4, catalytic C-terminal domain domain: Peptidylarginine deiminase Pad4, catalytic C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27879.77 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 APwimtpnt~~p~eV~v~~~~~n~~Fi~~v~~l~~~a~~~l~i~~~~~~~~DrW~QDe~E~GY~qaP~~~~pVvldspR~ 80 (370)
T d2dexx3 1 APWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRN 80 (370)
T ss_dssp CCCBCCCTTSCEEEEEECCCSSCHHHHHHHHHHHHHTTCEEEECCHHHHTTCCCTTTSEEEEEEEETTEEEEEEEECTTC
T ss_pred CCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCC
T ss_conf 98574689998648999861268999999999999729956746524578980300021130342689974558607220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~gl~~fp~~~llg~dfG~~tr~~~~~~v~~lDSfGNLEvsPPvt~~Gk~YPlGRIliG~s~~~~~~gr~m~~~v~dFL~A 160 (370)
T d2dexx3 81 RGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSA 160 (370)
T ss_dssp SGGGGHHHHTTSBTTBEEEECSCSSSCCCGGGSGGGEEECCCEEETTEEETTCCEEEEECSSCCTTCCCCCHHHHHHHHH
T ss_pred CCCHHCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 33011527774178753387348877642023567734479862588426777488547788876545330899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Q~VQ~Pv~L~sdWL~VGHVDEf~~FvPa~~~kgfrlLlAsP~a~~~Ll~~~q~~GhG~a~~f~g~~~~~~~tI~~iL~d~ 240 (370)
T d2dexx3 161 QQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNK 240 (370)
T ss_dssp SGGGCCEEEECTTBSSCCGGGTEEEEECSSGGGEEEEEEEHHHHHHHHHHHHHTTCTTCEETTTCTTSCCEEHHHHHHCH
T ss_pred HCCCCCCEECCCHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHCCH
T ss_conf 64599802305201057401017876369998538996388999999999987578646504655444221199986387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~l~~~N~~~q~~Id~nr~iLKrELGLte~DIIdiP~LF~~~~~~~A~a~fP~mVNmlVlg~~L~iPkPfGP~inG~c~le 320 (370)
T d2dexx3 241 TLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLE 320 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECCEEECGGGCEEESSCCTTSCEEETTEEEEECCCCCEETTEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHH
T ss_conf 78999999998631789999987099867731253440545878621237641666874033067899788488630799
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
.
T Consensus 321 e~v~~lleplGl~c~FiDD~~sYh~~~GeVHcgTNv~R~pf~~kWW~~~p 370 (370)
T d2dexx3 321 EKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFSFKWWNMVP 370 (370)
T ss_dssp HHHHHHHGGGTCEEEEECCTTTTGGGTCCTTTTEEEEECCCSSCGGGCCC
T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999745478758995473788861772540464441788866702689
|
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=27873.10 Aligned_cols=1 Identities=100% Similarity=1.002 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~p~~~eii~~le~~~P~~lAe~wDnvGL~vg~~~~~V~~I~valD~t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~ 80 (370)
T d2gx8a1 1 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 80 (370)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred CCCHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 99789999999986999671567987379689977649899997699999999997799999979987768964466788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~li~~~I~vys~HTnlD~~~~G~nd~La~~Lgl~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~agag~ 160 (370)
T d2gx8a1 81 AYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGH 160 (370)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHCCCEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCHHCCCCC
T ss_conf 05699999997897699932402105775799999984897533335555555542389817256666653000037875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ig~y~~~~~~~~g~G~~~~~~~~~P~ig~~~~~~~~~e~~~e~~~~~~~~~~v~~al~~ahpy~~~~~~~~~~~~~~~~~ 240 (370)
T d2gx8a1 161 IGNYSHCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETL 240 (370)
T ss_dssp BTTEEEEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 45632131013676541477788875676785664131430220427778889998887288610133421234655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 G~Grig~l~~p~~l~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GSG~s~i~~a~~~gaDv~ITGe~k~h~~~dA~~ 320 (370)
T d2gx8a1 241 GLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMM 320 (370)
T ss_dssp EEEEEEEEEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf 76459993786039999999998719982899588887423799973662789999987799899982886799999997
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~gi~lId~GH~sE~~~~~~l~~~L~~~~~~~~~~i~v~~S~~~~dP~~~i 370 (370)
T d2gx8a1 321 LGLNIVDPGHNVEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV 370 (370)
T ss_dssp HTCEEEECCGGGGGHHHHHHHHHHHHHHHHTTCCCEEEECCCCCCCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEC
T ss_conf 69979978832628999999999999750048856999954778976449
|
| >d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27872.60 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~l~d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D 80 (370)
T d2hgsa4 1 TNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQN 80 (370)
T ss_dssp CCSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99876588889999999999999997483654688888878345578685577687899999999999999999999737
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~fL~~~l~~~~~~D~Ft~~L~~i~~~v~~~g~~q~l~Lgl~RSDYMl~~~~~~~~~~KQVE~NTIS~sfggls~~v~~l 160 (370)
T d2hgsa4 81 AAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAV 160 (370)
T ss_dssp HHHHHHHHHTHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECSSSCEEEEEEEEECSSCCCHHHHHHSHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCCCEEEEEECEEEEECCHHHHHHHHH
T ss_conf 99999999877414799999999999999617866259988200654167777665424786112330002176648999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Hr~l~~~~~~~~~~~~~p~n~~~~~la~gla~a~~~y~~~KKvQQ~La~pgvLe~Fl~~~~~~~~~lr~tFa~ly~LD~~ 240 (370)
T d2hgsa4 161 HRHVLSVLSKTKEAGKILSNNPSKGLALGIAKAWELYGSTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVG 240 (370)
T ss_dssp HHHHHHHTTCHHHHTTSCCCCHHHHHHHHHHHHHHHHCCSHHHHHHTTSTTHHHHHSTTCHHHHHHHHHTCCCEEECSSS
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999862555421348899717999999999999974466778987498779987089889999999962314506887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~g~~a~~~a~~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~~e~~ayILMerI~P~~~~~~~vr~g~~~~~~~~iS 320 (370)
T d2hgsa4 241 EEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVVQCIS 320 (370)
T ss_dssp HHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTTSGGGGGEEEEECCCCCCEEEEEECTTSCCEEEEEEE
T ss_pred CCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCC
T ss_conf 45269999767390227755632477651015488999997688676667899974378776865898896022056132
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
-
T Consensus 321 ElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpylv 370 (370)
T d2hgsa4 321 ELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 370 (370)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred CCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCEECCEECCCCCCCC
T ss_conf 22243799957987997165107886278988887810254206686649
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=100.00 E-value=0 Score=27872.08 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~~~g~~ 80 (370)
T d2iida1 1 RNPLAECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWY 80 (370)
T ss_dssp CCTTGGGGCCTTHHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEE
T ss_pred CCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCE
T ss_conf 98557615881489999987647999999996999898889999999998789988999589988770678764877702
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~d~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iida1 81 ANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGK 160 (370)
T ss_dssp EESSCCCEETTCHHHHHHHHHTTCCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHH
T ss_pred ECCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32575563276489999999838763101025786279618852220233322455433320355543467777887877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (370)
T d2iida1 161 VVEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKL 240 (370)
T ss_dssp HHHHHHHSCHHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHHTTCCCEEEETTCTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88988742125666530100179999873255577887752100121001467776421001212566655404569999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~g~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~aD~VI~A~p~~~l~~i~~~p~l~~~~~~ai~~~~~~~ 320 (370)
T d2iida1 241 PTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVFTPY 320 (370)
T ss_dssp HHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCCTT
T ss_pred HHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 99999864876336864789888099189999964898179990078853898999607048999899999998337863
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~g~v~~aGd~~~~~~~~~~~a~~sG~~aA~~i~~a~~~ 370 (370)
T d2iida1 321 QFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 370 (370)
T ss_dssp HHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 10234504306668779963201378851099999999999999864249
|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27871.72 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~p~~~~~i~vEf~SpN~~kplHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~G~Qi~~l~~~~~~~~~~~~~~~~~ 80 (370)
T d1iq0a2 1 PFPRRPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQAAETLFALRHYGLTWDGKEKY 80 (370)
T ss_dssp CCCCEEEEEEEECCCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTTSHHHHHHHHHHHHTTCCCCSSSCH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999986999863899998864311361799999999999769979899847976499999999999856153346544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~y~~~~~~~~~~~~~~~~~e~~~~le~~~~~~~~~~~l~~~~~~l~~l~v~fD~~~~Es~l~~~~~~~~~i~~l 160 (370)
T d1iq0a2 81 DHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALL 160 (370)
T ss_dssp HHHHHHHHHHHHHCTTTGGGHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHTTCCCSEEEEHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCHHHHHHHH
T ss_conf 56644324666542788888899999999987666999999999888865411331101012202322364146667666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~ga~~~d~~~~~~~~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~~~~~~~~~~~~~~i~i~~ 240 (370)
T d1iq0a2 161 EQSPHVFRPREGKYAGALVMDASPVIPGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSA 240 (370)
T ss_dssp TTSTTEECCSSSTTTTCEEEECTTTSCSCSCCEEEEECTTSCBCHHHHHHHHHHHHTTSSCCCEEEECCCSSCTTCEEEE
T ss_pred HHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEC
T ss_conf 52361441246665447983374355566674003685267725862079987601033222110024467663267632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~d~~~~~~~~d~~iyVvd~~Q~~h~~~v~~~~~~~g~~~~~~~~~hv~~g~v~~~g~kMStR~G~~v~l~dll~ea~~~a 320 (370)
T d1iq0a2 241 PEGEAYTPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLAVSVDEVLEEATRRA 320 (370)
T ss_dssp EEEEECCCCCSEEEEEEESSSCCCHHHHHHHHHHTTCHHHHTTEEEEEECCEEETTBCSCC----CCBHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
T ss_conf 43443202356788887124047999999999981998034111257899983378534356887458999999999999
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~r~~~~~~~~~~a~~vgi~avky~~L~~~~~~~~~Fd~d~~lsfe 370 (370)
T d1iq0a2 321 RAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFE 370 (370)
T ss_dssp HHHHHHHCTTCSCHHHHHHHHHHHHHHHHHHHSCTTSCEEECHHHHHCSS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCEECHHHHCCCC
T ss_conf 99998508982008999987616632225864589998568789921479
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=27871.75 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~v~ipl~k~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs 80 (370)
T d3psga_ 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 98981510735889988728289998761146455305555576464033134687799999986898389999967989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (370)
T d3psga_ 81 NLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAP 160 (370)
T ss_dssp CEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEECCCC
T ss_conf 82897865787332566621787564423679718999578359999999778650101211389999603674021456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~ 240 (370)
T d3psga_ 161 FDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDS 240 (370)
T ss_dssp CSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHCCCCEEEEEECCCCEEEEEEEE
T ss_conf 66644545674345688763453554054442226888605888771386378583330341158864135537998724
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 i~v~g~~~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~ 320 (370)
T d3psga_ 241 ITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYIL 320 (370)
T ss_dssp EESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEE
T ss_pred EEECCEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEEE
T ss_conf 87299677048970179845886275789999999998587260389677744226778619999899999988599399
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a 370 (370)
T d3psga_ 321 QDDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ECSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECCCEEEEEEEECCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECC
T ss_conf 82992899999744589889719998896667999998999999899649
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27870.88 Aligned_cols=1 Identities=100% Similarity=1.467 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d2iw1a1 1 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPA 80 (370)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 98999148899998999999999999977997999956787788886389986765544301158899999999986165
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iw1a1 81 DRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPER 160 (370)
T ss_dssp SEEEESSCCTTCSEEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGG
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCE
T ss_conf 52531036723789987622441046630474200040000067889999742157469982479999999860999642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~ 240 (370)
T d2iw1a1 161 FQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRK 240 (370)
T ss_dssp EEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHH
T ss_pred EEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 89997402222112467656666654304888663699998514554203332011123323322100000112222223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~ 320 (370)
T d2iw1a1 241 FEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEP 320 (370)
T ss_dssp HHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCC
T ss_conf 22222222222222223323344422233334443222234331133214577039993899718885279836998699
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~g~ 370 (370)
T d2iw1a1 321 FSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG 370 (370)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 99999999999997699999999999999999828547999999998485
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=0 Score=27870.43 Aligned_cols=1 Identities=100% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~ 80 (370)
T d1rh9a1 1 NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQM 80 (370)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHH
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99679989999999999999999526675011588999999999999998799199979856766765678887546788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~ 160 (370)
T d1rh9a1 81 FQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVA 160 (370)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986999999624443212687555410025777677521124899999999999999998641666765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (370)
T d1rh9a1 161 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQ 240 (370)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTST
T ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16870365300036666677543688999999999999965899749984221456544656777444565110235688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (370)
T d1rh9a1 241 GIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAK 320 (370)
T ss_dssp TCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 66088753246765567760245667788999999999757975998453676789988889999999999999999998
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 321 SGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp TTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 58980899982154788767799845866897228999999999986249
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=100.00 E-value=0 Score=27869.32 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d3coxa1 1 TLADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 80 (370)
T ss_dssp CCCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888899799978478999999999878793999967899887654533221113455443334544445544543456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vGG~S~~~~~~~~r~~~~df~~~~~~~~~~~~~~~~y~~~e~~lgv~~~~~~~ 160 (370)
T d3coxa1 81 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 160 (370)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67656535664445578862156420356555015865524897885223556873788999999999750876444776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~s~~~~~L~~a~~~g~~~i 240 (370)
T d3coxa1 161 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAAATGKLTI 240 (370)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSTTTTCSTTCCSSSBCCGGGTHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 66788860889999999974986334664345565655444345531224522364443436837877899985898489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~t~~~V~~I~~~~~~~~~V~v~~~~~~~~~~~~~~~~A~~VILaAGai~Tp~LLL~S~~~~~l~~~s~~vG~~~g~~~~~ 320 (370)
T d3coxa1 241 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMKAQGHLPNLSSQVGEGWGVLLNK 320 (370)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTSCTTTTCCBSSCTTT
T ss_pred EECCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
T ss_conf 73673899998499718999999588662322899989999995078885999996789897998877667885664575
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------6
Q 001706 633 -------------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~g~~~~~~~~~~~d~~~~pg~~~~np~~t~~a~a~~~~~~~~~~~~ 370 (370)
T d3coxa1 321 ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 370 (370)
T ss_dssp TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 55666544687774576334366766768205379998878998875029
|
| >d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Renal dipeptidase domain: Renal dipeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27801.15 Aligned_cols=1 Identities=100% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~e~A~~lh~~~pViD~H~D~~~~l~~~~~~~~~~~~~~~~~~~~ghvDlprlr~Ggv~~q~faifv~~~~~~~~~~~ 80 (369)
T d1itua_ 1 DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVR 80 (369)
T ss_dssp CHHHHHHHHHHTTSCEEEEEECHHHHHHHHHTTCTTSGGGCTTTCCSSSCCHHHHHHTTEEEEEEEECCCGGGTTTTHHH
T ss_pred CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 94789999996489989834328999998733333444344355888865799999669987999998078777759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~al~~id~~~~~~~~~~d~~~~~~s~~di~~a~~~gkiavil~iEg~~~l~~dl~~L~~~y~lGvR~i~Lt~n~~N~~a~ 160 (369)
T d1itua_ 81 RTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWAD 160 (369)
T ss_dssp HHHHHHHHHHHHHHHCTTTEEECCSHHHHHHHHHHTCEEEEEEEECGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999999999999688768973157899998743672788414345311256799999986495598722687887777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~g~~~~~~~GLt~~G~~~V~emn~lGmiiDlSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNl~De~l~aI 240 (369)
T d1itua_ 161 NWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp BGGGGGTSSCCSSSSBCHHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 75433577876678867678999998641481666487868899988612577456424026654033338998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~~GGviGi~~~~~fl~~~~~~~~~~~~~hi~~~~~l~G~dhVgiGsDfdg~~~~p~gl~~~~~~p~l~~~L~~rG~se~ 320 (369)
T d1itua_ 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEA 320 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHH
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 96597488850564212330236899999999999870952179865678999998777787788999999998699999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
+
T Consensus 321 ~i~ki~g~N~lRv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (369)
T d1itua_ 321 EVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS 369 (369)
T ss_dssp HHHHHHTHHHHHHHHHHHHHCCSSSCCCCCCCCGGGCCSSSCCCTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 9999998869999999999998613876789984572765441578899
|
| >d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitinase AC species: Arthrobacter aurescens [TaxId: 43663]
Probab=100.00 E-value=0 Score=27799.58 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~d~~~lr~rw~~~l~g~~~~~~~d~~~~~~l~~l~~~a~~~~~~~~~~~~~~~lW~dl~~~~sa~~~~~~~rl~~mA 80 (369)
T d1rwha1 1 PGAAEFAALRNRWVDQITGRNVIQAGDPDFAKAITALNNKAADSLAKLDAAAGRTSVFTDLSLAKDAEMVTTYTRLSQLA 80 (369)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCCCTTCHHHHHHHHHHHHHHHHHHHTBCCCTTCSCSBTTCCTTSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96679999999999997488766657878999999999999999997335677666688887886278999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Ay~~pgs~~y~d~~l~~~I~~al~~l~~~~~~~~~~~~gNWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (369)
T d1rwha1 81 TAWATPTAAVFGDAAVLAAIKAGLADANTLCYNDRKEEVGNWWSWEIGVPRALADAMVLLHAELSAAERTAYCAAIDHFV 160 (369)
T ss_dssp HHHTSTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99819999542699999999999999997188789999999101532858999999998502179899999999999866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 pdp~~~~~~~~~~~~~tGaNrvd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~vt~gdGf~~DgSf~qH~~~~Y~G~YG 240 (369)
T d1rwha1 161 PDPWLQFPPKRGKITSVGANRVDLCQGIIIRSLAGEDPTKLNHAVAGLSQVWQYVTSGDGIFRDGSFIQHSTTPYTGSYG 240 (369)
T ss_dssp SCTTEESCGGGCCEECCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHGGGGGSCBSSSSEEBTTSCEEETTTEECTTTHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCCH
T ss_conf 78643346667752252009999999999999980899999999998641122245897423477636304442166425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~m~~~v~GR~ISR~~~~~~~~g~~~~~~~~~la~~~ 320 (369)
T d1rwha1 241 VVLLTGLSKLFSLLGGTAFEVSDPTRSIFFDAVEGSFAPVMINGAMADAVRGRSISREANTGYDLGASAIEAILLLARAM 320 (369)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCGGGHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799898887899999999995003462577116667887100788776168999999999998519
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~vk~~i~~d~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 369 (369)
T d1rwha1 321 DPATAARWRGLCAGWIARDTYRPILNSASVPRTALVKQLEATGVAPVAE 369 (369)
T ss_dssp CHHHHHHHHHHHHHHHHTCCSSCTTTTCCHHHHHHHHHHHHHTCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999999998718765544676522689999986067783889
|
| >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: HD domain domain: Hypothetical protein aq 1910 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=27797.16 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~k~~~D~i~g~i~~~~~~~rii~s~~fqRL~~~~Ql~~~~~v~p~a~htR~~HSLgV~~lar~l~~~l~~~~~~~v~~A 80 (369)
T d2heka1 1 MIKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLA 80 (369)
T ss_dssp CEEEEEETTTEEEEEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH
T ss_pred CCEEEECCCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 95377359988886488999982997670345773478552338999566211998999999999999743328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~LlHDiGh~PFsH~gE~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~d~ 160 (369)
T d2heka1 81 GLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGS 160 (369)
T ss_dssp HHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHHSHHHHHHHTTSCHHHHHHHHHHHHTCCSSHHHHHHHHHHHSTTCH
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
T ss_conf 99860265022204666620345520468998740179999998521236999999863246675204588775265101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Drldyl~rd~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~~~~~~~e~~~~~R~~m~~~vy~h~~~~~~~~~l~~~~~~~ 240 (369)
T d2heka1 161 DRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKL 240 (369)
T ss_dssp HHHHHHHHHHHHHTCCSSCCCCHHHHHTEEEETTEEEEEGGGHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 03433344465506767730199998877653400013563499999999999999899955478899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~d~~~~~~l~D~~i~~~L~~~~~~~~~~~~i~~R~l~K~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 320 (369)
T d2heka1 241 ISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEV 320 (369)
T ss_dssp TSSCCCSSTHHHHTCCHHHHHHHHHHCSTTHHHHHHHHSSCCCEEEEEESCHHHHHHHHHHHHHHSCGGGEEEEEEEECS
T ss_pred HHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 86589788999973369999999985802519999998340252020167788899999999987442144401343445
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~i~i~~~~~l~~l~~~S~lv~~L~~~~~~riy~~~~v~e~~~~~~~ 369 (369)
T d2heka1 321 YGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK 369 (369)
T ss_dssp CCSCCEEEETTEEEEHHHHCHHHHHCCCEEEEEEEECTTTHHHHHHTTC
T ss_pred CCCCEEEECCCCEEEHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHC
T ss_conf 6777489639855583563699998688666378889999999998629
|
| >d2ewoa1 d.126.1.6 (A:2-370) Agmatine iminohydrolase {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=27796.22 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~tp~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~~~v~~~~~~~a~~~~~~~ 80 (369)
T d2ewoa1 1 AKRIKNTTPKQDGFRMPGEFEKQKQIWMLWPWRNDNWRLGAKPAQKAFLEVAEAISEFEPVSLCVPPLQYENALARVSEL 80 (369)
T ss_dssp CCEECSSCHHHHTCCCCCTTSCEEEEEECCCCCTTTSSGGGHHHHHHHHHHHHHHHTTSCEEEEECGGGHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 98567899301387878872416069998789986303578999999999999985898699998938999999998536
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~i~~~~~~~dD~W~RD~GP~~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~~lvlE 160 (369)
T d2ewoa1 81 GSHNIRIIEMTNDDAWIRDCGPTFLVNDKGDLRAVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLE 160 (369)
T ss_dssp TCCSEEEEECCCSSCCTTTSSCEEEECSSSCEEEEEEECCTTTTTTTCSSSCCTTHHHHHHHHHHTTTCCEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 77777999924797566134645898588988998533367765445545522457799999998736543466354875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 GG~ie~dG~GtlltT~~cll~~nRNp~~s~~~ie~~L~~~LGv~~viwL~~g~~~DdTdGHID~~arFi~~~tvl~~~~~ 240 (369)
T d2ewoa1 161 GGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTD 240 (369)
T ss_dssp GGGEEEETTTEEEEEHHHHTSTTSCTTSCHHHHHHHHHHHHCCSEEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCC
T ss_pred CCCEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 89789889985896445621667899989999999999985994799844766666667773206997289849997148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 d~~~~~y~~~~~~~~~L~~~~d~~G~~~~i~~lp~p~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (369)
T d2ewoa1 241 DKEHPFYQEAKAAYDFLSQQTDAKGRPLKVHKMCVTKEPCYLQEAATIDYVEGSIPREEGEMAIASYLNFLIVNGGIILP 320 (369)
T ss_dssp CTTSTTHHHHHHHHHHHHTCBCSSSCBCEECCBCBCSSCEECCCGGGSCCCCC-------CEECCBTTCCEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE
T ss_conf 87786579999999999987875699753885368975443333455444467664568988654236789999999990
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
=
T Consensus 321 ~yg~~~D~~Al~~l~~~fP~r~Vv~i~~~~l~~~gG~iHCiT~q~Pa~~ 369 (369)
T d2ewoa1 321 QYGDENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIHCITQQQPATL 369 (369)
T ss_dssp CCSCTTHHHHHHHHHHHSTTSEEEEECTHHHHTTSCCTTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCEECCCCCCCCC
T ss_conf 1798678999999998888997999844698864975247164536899
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=100.00 E-value=0 Score=27794.79 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~g~~P~~l~~~y~~~~~~tG~gvtVaIid~G~~~~~~~Dl~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 80 (369)
T d1ga6a_ 1 AGTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGDYSDDQQGQGEW 80 (369)
T ss_dssp CCBCCCBCGGGHHHHTTCTTSCCEEEEEEEEEEESBCHHHHHHHHHHHHHTTCCCCCEEEEECSCTTSCCCBCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEE
T ss_conf 98887749899999739998889887489999617865678899999986599989977651799888888887721133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ld~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~~G 160 (369)
T d1ga6a_ 81 DLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 160 (369)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 24500001015686499999957999865699999999999758986244244322457886168999999999999789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~s~~~ 240 (369)
T d1ga6a_ 161 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYE 240 (369)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 78998179876557678898766543434665688402333100135777765442021356787755335789866656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~P~~~~~~~~~~~~r~~pdv~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~vAGvvALi~~a~~~~~G~~n~~ly~~~~~ 320 (369)
T d1ga6a_ 241 SKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISS 320 (369)
T ss_dssp ECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEETTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEECCEECCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 67543334422578852201102467875048726854666578753113899999999863567668768899998864
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~di~~g~n~~~~~~~~a~~G~d~~tG~G~~d~~~l~~~~~s~~~ 369 (369)
T d1ga6a_ 321 TPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSNGF 369 (369)
T ss_dssp CGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCC
T ss_conf 7665204445888888887678678988956724379999999986699
|
| >d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27793.52 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~~eg~ltvW~~~~~~~~~~~~~~~~fe~~~gv~V~v~~~~~~~~kl~~~~~~g~~pDv~~~~~~~~~~~~~~g~l~~L~ 80 (369)
T d1laxa_ 1 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT 80 (369)
T ss_dssp CCCTTSEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCC
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCC
T ss_conf 98630899996798316999999999865219879999688799999999866999869998908899999879967588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~dG~~ygiP~~~~~~~~~ynkd~~~~~p~Tw~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (369)
T d1laxa_ 81 PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL 160 (369)
T ss_dssp CCHHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCCSSGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHCEECCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 44533455468898653489999897510220135775000112110057899876442037875632577764004899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (369)
T d1laxa_ 161 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV 240 (369)
T ss_dssp HHHTTCEEEEECSSCEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTSEEEEEECGGGHHHHHHHTC
T ss_pred HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
T ss_conf 98717720002355544454455778999999999998752764444552677765515775687416577540011245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
T d1laxa_ 241 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT 320 (369)
T ss_dssp CEEEECCCBBTTBCCCCEEEEEEEEEBTTCSCHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHH
T ss_conf 61376314555677655556435664057855899999999864899999999973898865133200444439489999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------6
Q 001706 633 ------------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~s~~eal~~~~~~it 369 (369)
T d1laxa_ 321 MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT 369 (369)
T ss_dssp HHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 9999608007888568999999999999998399999999999998519
|
| >d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=27720.50 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~k~ltfdDVlLvP~~sti~srdVdls~~~~~~~~l~iPIiss~MDtV~~~~mA~~la~~Gglgvlhr~~~~ 80 (368)
T d2cu0a1 1 KFVEKLEKAIKGYTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGI 80 (368)
T ss_dssp CHHHHHHTCCCCCCGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCH
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCH
T ss_conf 96788998876288000898589776766563653796188314889895798776888999999978996575064898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 e~~~~~v~~v~~~e~~~~~~~d~~~~~~v~~~~~~~~~~r~~~l~~aGvd~ivID~A~Gh~~~~i~~lK~ir~~~~~~vI 160 (368)
T d2cu0a1 81 EEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFI 160 (368)
T ss_dssp HHHHHHHHHHHTCCCCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999887433444324101366763799932572778999999983998798437542012456666554121043132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 aGNVaT~e~~~~l~gaD~VkVGIG~Gs~CTTr~~tGvG~Pq~sAi~e~~~~~~~~~~~iiADGGi~~~Gdi~KAla~GAd 240 (368)
T d2cu0a1 161 VGNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD 240 (368)
T ss_dssp EEEECCHHHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred ECCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEEECCC
T ss_conf 21136799997652276214445675555332112423434789999999875249706845887867721135664132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~VMlG~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~l~~l~ 320 (368)
T d2cu0a1 241 AVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLV 320 (368)
T ss_dssp EEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHH
T ss_pred EEECCCHHCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 35305311142235773671599270135676642211357752223555333444378832885078888899999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
.
T Consensus 321 gglrs~m~y~G~~~l~e~~~~~~f~~vt~a~~~E~~~h~~~~~~~~~~ 368 (368)
T d2cu0a1 321 GGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHPHDIIITNEAPN 368 (368)
T ss_dssp HHHHHHHHHTTCSBHHHHHHHCCEEECCHHHHHHHSCCSSCCSCCCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf 999999876286509998509789999954142467877366356899
|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=27719.75 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~ 80 (368)
T d2ncda_ 1 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQS 80 (368)
T ss_dssp CCSSSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECC
T ss_conf 91589999999999999999999999999999999874899756997999990789901027898579957998699706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf 160 (368)
T d2ncda_ 81 IDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLF 160 (368)
T ss_dssp SCHHHHTTTCCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHH
T ss_conf 88655677686466778587999986214999998898775036513773115787560671366644344667999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~ 240 (368)
T d2ncda_ 161 DSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATA 240 (368)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 45443202455526899999886560201256421354311302666442334430220477788999999987511244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~t~~n~~ssrSh~i~~i~v~~~~~~~~~~~~s~l~~VDLAGse~~~~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPy 320 (368)
T d2ncda_ 241 STAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPY 320 (368)
T ss_dssp SSSCTTTTTTCEEEEEEEEEEECTTSCCEEEEEEEEEECCCCCCC----------CTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 22146545554327899999976698856765444422010233102321024552026499999999998658998997
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
-
T Consensus 321 R~SkLT~lL~dsLggns~t~mI~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 321 RNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp GGSHHHHHHGGGSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998985599870999999798735499999999999997569
|
| >d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamate-cysteine ligase family 2 (GCS2) domain: Carboxylate-amine ligase YbdK species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27719.30 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~f~~~~~~tiGvE~E~~lvd~~~~~~~~~~~~ll~~~~~~~~~~~i~~El~~~qiEl~t~p~~~~~e~~~~l~~~~~~ 80 (368)
T d1r8ga_ 1 LPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKV 80 (368)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEETTTTEECSCCHHHHTTTSSSCSSSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999983489876543679987667757999997222246886310467766998077779999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~~~~~~~~g~hv~~~~~d~~~~~~~~~~~~~~~p~l~ 160 (368)
T d1r8ga_ 81 VLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFI 160 (368)
T ss_dssp HHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSSHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99987655875244575212672215577508999998742707888764256031168999999999999999868998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 aL~anSP~~~G~~tg~~s~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vRp~~~~~~iEiR~~D 240 (368)
T d1r8ga_ 161 ALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMD 240 (368)
T ss_dssp HHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCCCCSSHHHHHHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEE
T ss_pred HHHCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 88528663358677886775267750876565430001120799999998556445677056316876466742124789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~p~~~~~~~~aa~~~~l~~~l~~~~~~~~~~~~~~~~~~n~~~aar~Gl~~~l~~~~~~~~~~~~~~~~~Ll~~~~~~l 320 (368)
T d1r8ga_ 241 TPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSA 320 (368)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 99988999997568887888998617877640448999999998876144411000689967689999999999999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~lg~~~~l~~l~~~v~~g~t~A~~lr~~~~~~gsl~~~v~~~~e~~~ 368 (368)
T d1r8ga_ 321 HKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWA 368 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 978898999999999982999999999999818999999999998739
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=27718.28 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~g~a~~~~a~~~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~ 80 (368)
T d1mdah_ 1 EKSKVAGSAAAASAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFA 80 (368)
T ss_dssp CCCCCCSHHHHHHHTTCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCEECCCCCEEE
T ss_conf 94121200000123445679866645589876126972045788621799708998377888578777513989998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~ 160 (368)
T d1mdah_ 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160 (368)
T ss_dssp EEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE
T ss_pred EECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEE
T ss_conf 97556764010356786999989999383064378542102468864058878998999996899859999899893867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 240 (368)
T d1mdah_ 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240 (368)
T ss_dssp EEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCS
T ss_pred EEECCCCCEECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECC
T ss_conf 86046752374699823999948998899982689626665303111356664660101558689993489779996069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a 320 (368)
T d1mdah_ 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAII 320 (368)
T ss_dssp SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEE
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 93699760246543045540127883568871799879998358973340588649999899994868955899651799
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
.
T Consensus 321 ~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~~~~a 368 (368)
T d1mdah_ 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA 368 (368)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCCC
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCC
T ss_conf 998999899999489996999989999799998799998789973489
|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27717.24 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T d1f52a2 1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF 80 (368)
T ss_dssp TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 98879999999999997699870378854288999421035576777565577322456887666887787655577615
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpKP~ 160 (368)
T d1f52a2 81 PVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPM 160 (368)
T ss_dssp BCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSCSS
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 53001107889999999888622570564223456784322078786577889999999999999997436334741568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~GsG~HiH~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGll~~~~~~~al~~PtvNSYkRl~~~~~aP~~~~Wg~~NR~ 240 (368)
T d1f52a2 161 FGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRS 240 (368)
T ss_dssp TTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEESSCTT
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf 89877532589874159985656555556489999999999986699899977996077652477768743452367655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~iRi~~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~lP~sl~eAl~a 320 (368)
T d1f52a2 241 ASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAGSLEEALNA 320 (368)
T ss_dssp EEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHH
T ss_pred CCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHH
T ss_conf 31464025788662478447880177789999999976542421589999777872448976762320151379999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
=
T Consensus 321 l~~d~~~~~a~~~lGe~~v~~y~~~K~~E~~~~~~~vt~wE~~~Yl~~ 368 (368)
T d1f52a2 321 LDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV 368 (368)
T ss_dssp HHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 964978788765156999999999999999999679999999741689
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27716.69 Aligned_cols=1 Identities=100% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 Tid~~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~ 80 (368)
T d1pyya4 1 TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMM 80 (368)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 93979999999999999997089569999999999939999967988854236766103443265517668863054699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~aaaLe~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vtl~~al~~S~N~~~~~l~~~lg~~~~~~~~~~~G~~~ 160 (368)
T d1pyya4 81 LAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGV 160 (368)
T ss_dssp HHHHHHTTCCCTTCEEECCCEEETTEEECCEETTTEECCSCEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99864023332222222101102444432345544334880456999997532454143210358244789998753487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~e~~g~~p~~~~~~~~~~~~G~~~~~tplq~a~aya~iANgG~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~i 240 (368)
T d1pyya4 161 PTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPV 240 (368)
T ss_dssp CCCCSCSSCCCCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEEGGGTEEEECCCCEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCC
T ss_conf 42245433233467643320000222346655107888867789854876205579888866876410134432344443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~m~~~v~~~~~~~~~~~gtg~~~~~~~g~~vaGKTGTaq~~~~~~~~~~~~~~~~~~~fvg~~P~~~P~~ 320 (368)
T d1pyya4 241 SKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDF 320 (368)
T ss_dssp CHHHHHHHHHHHHHHHHCTTTCTTEETTTTEESSCCTTSCCEEEEEEEECBCSSSSSBCCSTTCEEEEEEEEESSSSCSE
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCE
T ss_conf 27899999999987531145542676046531213799506678822201477788501366565699999957589959
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
+
T Consensus 321 ai~V~v~~p~~~~g~~gg~vAapi~~~i~~~~~~l~~~~~~~~~~~~~ 368 (368)
T d1pyya4 321 ILYVTVQQPEHYSGIQLGEFANPILERASAMKDSLNLQTTAKALEQVS 368 (368)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTGGGCTTSCCSTTTTCC
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999778867887306899999999999997743589999724489
|
| >d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Glutamine aminotransferase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27715.18 Aligned_cols=1 Identities=0% Similarity=0.503 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~la~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~ 80 (368)
T d1v2da_ 1 MRLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPES 80 (368)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGG
T ss_pred CCCCHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 97782345467879999999864399889459889998899999999998602568899867899999997525557741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 160 (368)
T d1v2da_ 81 VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNT 160 (368)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEES
T ss_pred EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 26515307888777650444456532358850134567875177320001354345444788999975335765999769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~ 240 (368)
T d1v2da_ 161 PMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240 (368)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98866666999999999999998498265223333220333333222223344503641455323454322211144223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~~~~~~ 320 (368)
T d1v2da_ 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAF 320 (368)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHH
T ss_conf 32002221012332233333222222333221025788999999865322456876694786688306999968950899
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------6
Q 001706 633 -----------------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------------~ 633 (1024)
=
T Consensus 321 ~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l 368 (368)
T d1v2da_ 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV 368 (368)
T ss_dssp HHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 999969999996233078999899899996499999999999999869
|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27645.37 Aligned_cols=1 Identities=0% Similarity=1.101 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~GL~gv~~~eT~IS~id~~~G~L~YRG~~i~dLa~~~sFEEva~LL~~G~LPt~~el~~f~~~L~~~~~lp~~v~~~ 80 (367)
T d1o7xa_ 1 VVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDT 80 (367)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97977799837588680386898879998874999861599999999997798969999999999999863581999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~~~p~~~hpm~~l~~~vsal~~~d~~~~~~~~~~~~a~~l~A~~p~i~a~~~r~~~g~~~~~p~~~~s~~~~~~~~~~~ 160 (367)
T d1o7xa_ 81 IYLMPKEADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLLASFA 160 (367)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 98601230146788888998765300234321110167789989999999999876489877885034468887654048
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~l~~~lvl~adHg~n~Stfa~r~~aSt~~d~~~~~~aa~~~l~Gplhgga~~~~~~~l~~~~~~~~~~~~~ 240 (367)
T d1o7xa_ 161 REPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDPNRVQNWF 240 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSGGGHHHHH
T ss_pred CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 88506777776567400015788854300001451376422114667776045434673799999999633654237899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~pNvd~~~~~l~~~ 320 (367)
T d1o7xa_ 241 NDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYA 320 (367)
T ss_dssp HHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99986147754167875343566228999999999865046512699999999999998534589986838999999998
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 lG~p~~~~~~lf~~~R~~G~~AH~~Eq~~~~~~l~RP~~~Y~Gp~~~ 367 (367)
T d1o7xa_ 321 LGFPVYMFTALFALSRTLGWLAHIIEYVEEQHRLIRPRALYVGPEYQ 367 (367)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
T ss_conf 09786778899999999999999999985789841866510098999
|
| >d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27645.35 Aligned_cols=1 Identities=0% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~e~ah~~~~~~~~~~~~~~~~~~~~~~L~v~~~Gl~~~nPi~lAsG~~~~~~~i~~~~ 80 (367)
T d1d3ga_ 1 MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLY 80 (367)
T ss_dssp CCSCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHTTCCC---CCCCGGGCEEETTEEESSSEEECTTSSTTSSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHHH
T ss_conf 97770899999999999865898999999999998337553236898777568899866998676848787899999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~G~G~vv~kTit~~~~~gn~~pr~~~~~~~~~~~n~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~pv~vsi~~~~~~~ 160 (367)
T d1d3ga_ 81 KMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSV 160 (367)
T ss_dssp HHTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCS
T ss_pred HCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
T ss_conf 35874786134246632457760322102111211224767754699998888875411343436863899834654507
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~ad~lelNiScPn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~vKlsP~~~~~~i~~~a 240 (367)
T d1d3ga_ 161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp CHHHHHHHHHHHHGGGCSEEEEESCCTTSTTC----CHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88888877777765314400245000321122210111101257888887653202245776301247641000134467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~g~~gi~~~nt~~~~~~~~~~~~~~~~gg~sG~~~~~i~l~~v~~v~~~~~~~ipIig~GGI~s~~Da~e~i~aG 320 (367)
T d1d3ga_ 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC
T ss_conf 88876543102113332234454344211244321121110230889999999738995199988979999999999839
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 As~VQi~Ta~~~~Gp~ii~~I~~~L~~~l~~~G~~si~dl~G~a~~~ 367 (367)
T d1d3ga_ 321 ASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR 367 (367)
T ss_dssp CSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCSSHHHHTTGGGGC
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHCCC
T ss_conf 97887417788239079999999999999984999899962802269
|
| >d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: DmpA-like domain: L-aminopeptidase D-Ala-esterase/amidase DmpA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27641.77 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 r~r~R~lGi~~~~~pGp~N~ITDV~GV~VGH~T~~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~v~ag~~~~~g~~~~~ 80 (367)
T d1b65a_ 1 KPRARDLGLPFTGVTGPYNAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMT 80 (367)
T ss_dssp CCCGGGGTCCCCSCBCTTSSGGGSTTCEEEEEEEECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBC
T ss_pred CCCHHHCCCCCCCCCCCCCCEECCCCCEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 97567539887888799875014798566223644687654679986711799971899756786055561368876678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~v~e~g~~~~aIvLTggsa~Glaa~~~v~~~l~~~~~g~~~~~~~~vvPiV~~~~D~~l~d~~~~~~~~~~~~~A~~ 160 (367)
T d1b65a_ 81 GTHWIEDGGYFLGPVVITNTHGIGMAHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEADVRKALD 160 (367)
T ss_dssp SHHHHHHHCEECSCEEEEEGGGHHHHHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHHHHHHHH
T ss_pred CHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 05653547753677987567248888789999999856888777885210451279980677876678988999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~A~~~~v~~G~VGAGtGa~~~~~KGGiGtASr~~~~~~~~~tVGaLV~~N~g~~~~~~~~g~p~g~~l~~~~~~~~~~~~ 240 (367)
T d1b65a_ 161 NVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRDGTPQSQLQER 240 (367)
T ss_dssp TCBSSCCCCBSCGGGTTCEETTEECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCTTCHHHHC---
T ss_pred HHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 75228877887573211321356787521267887178835999999744788500240775200131445777777889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 nTtI~VVATDApL~~~ql~RlA~~A~~GlARai~p~ht~dGD~vfA~STg~~~~~~~~~~~~~~~~~l~~~~l~~lf~Aa 320 (367)
T d1b65a_ 241 GSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHRSAPFLDVEMVNDEPLDTVYLAA 320 (367)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCCCTTCEEEEEEEECCSCCCCGGGSCSEEEEEEECSGGGHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHH
T ss_conf 98899999598189999999999865315312677779984779994057867766556554441004720008899999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 aea~eeAI~nal~~A~t~~G~~~~~~~~~alp~d~~~~~~~~~~~l~ 367 (367)
T d1b65a_ 321 VDSVEEAVVNAMIAAEDMGGTPFDRLLVQAIDHERLRAVLRQYGRLA 367 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEECSTTCSCEECCCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCC
T ss_conf 99999999999974677657589987741799999999999846679
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=100.00 E-value=0 Score=27640.99 Aligned_cols=1 Identities=0% Similarity=-1.359 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~i~~~~e~~~lp~~~~~~~~~~~~~y~~a~~~s~~~~a~e~~~~~~~~~~~~~~~~~~~p~~ 80 (367)
T d1iuqa_ 1 ASHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFV 80 (367)
T ss_dssp CCCCCGGGGCCSHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98641322266589999999999855789857999999999999999973489995089999999999888741478743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 f~~~h~~~~~~~~~~~~~~~~~~~li~~~~s~v~~~~~l~~~~Ekl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r 160 (367)
T d1iuqa_ 81 FSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAE 160 (367)
T ss_dssp CCSEECCCCSSSCHHHHHHHHHGGGBCGGGCEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHH
T ss_pred CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 67521000578778999999999986478777815789999999860799779987885400389999998512656210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~ 240 (367)
T d1iuqa_ 161 NTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240 (367)
T ss_dssp HCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTT
T ss_pred CEEEEEEHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf 33898545562257789999748878995465444563101002233268899999986168759999456764676666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~ 320 (367)
T d1iuqa_ 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHK 320 (367)
T ss_dssp TCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHCC
T ss_conf 66505665575505899999855799956856044133425887543320001036677861488679735666300022
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~~~~p~~~~~qp~ 367 (367)
T d1iuqa_ 321 NPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW 367 (367)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGGGCCSSCCEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 63889999999999999999999999985689822258888878999
|
| >d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27640.23 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~Y~~~~~lR~~~Pv~~~~~~w~vt~~~di~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (367)
T d1ue8a_ 1 MYDWFKQMRKESPVYYDGKVWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELR 80 (367)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECCHHHHHHHHTCTTTEECCCSSTTTTHHHHHTTCCCCCCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 90899999856998844998998799999999669853537765567542224466432224555552006867875667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~f~~~~l~~~~i~~~~~~ll~~l~~~~d~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ue8a_ 81 NLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALRLGRADEIFSI 160 (367)
T ss_dssp HHHHGGGSGGGSCHHHHHHHHHHHHTTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSSSSSTTTCC
T ss_pred HCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 30133478665144999999999986303345316665543444210110464211026778888877620004799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~~~ 240 (367)
T d1ue8a_ 161 GRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREKGA 240 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999999999986423431012344441347777764133210010111222101023777633000111345556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~ai~E~lR~~p~~~~~~r~~~~~~~l~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~P~R~~~~~l~FG~G~r~C~G~ 320 (367)
T d1ue8a_ 241 LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPHLSFGSGIHLCLGA 320 (367)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECSSCEEEECHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCSTTSCTTH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 77877645205532334432344310221134048754433210035766689722018798999988779987188119
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 ~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~g~~~l~Vr~~r~ 367 (367)
T d1ue8a_ 321 PLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGYRKLVVRVERT 367 (367)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEECSCSSBCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 99999999999999985896634898534587758975236999979
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=100.00 E-value=0 Score=27641.28 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~v~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (367)
T d1n4wa1 1 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 80 (367)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95709996769899999999977959199991689988766565422222344544333334433543321235677766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~g~~lGG~S~i~~~~~~r~~~~~f~~~~~~~~~~~~l~pyy~~ae~~l~~~~~~~~~~~~~ 160 (367)
T d1n4wa1 81 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 160 (367)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 66566740223688652135776378873224360006866742232245738899999999998829877888866667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~k~s~~~~yl~~a~~~gn~~i~~~t 240 (367)
T d1n4wa1 161 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLH 240 (367)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSSBCCTTTTHHHHHHHTTSEEEEESE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC
T ss_conf 78728899999998738642235323224875555655567631246433445654467667623789758980998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~V~~I~~~~~g~~~v~v~~~~~~~~~~~~~~i~Ak~VVLaAGai~Tp~LLl~S~~~g~l~~~s~~lG~~~~~~l~~~~~~ 320 (367)
T d1n4wa1 241 QVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGCVLGKATDD 320 (367)
T ss_dssp EEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTCCTTTTCCBSSCTTTTBCT
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCC
T ss_conf 89998985899889999997777752049998648999906523079999847777999986676667865545644456
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
+
T Consensus 321 ~g~~~~~~~~~~~~g~~i~~~~~~~p~~t~~ala~~~~~~~~~~~~~ 367 (367)
T d1n4wa1 321 YGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 367 (367)
T ss_dssp TSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 66435877730347743568687893340799998799999885459
|
| >d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=100.00 E-value=0 Score=27639.14 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L 80 (367)
T d1ursa_ 1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV 80 (367)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf 97999827884579999999999999879989999848828999999999966999839998582789999987995400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ursa_ 81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYG 160 (367)
T ss_dssp CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCSSCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 24554411479778854638877876420354158887401023431008999999866303667777521068887541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~g~~~~~~~~~~~~~~~~ 240 (367)
T d1ursa_ 161 GYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGV 240 (367)
T ss_dssp CEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCSCCTTCCHHHHHHHHHTTCCSEEEECGGGHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 02211588644543135588889999999999986136564222037788888527741103366665444441156326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~P~~~~g~~~~~~~~~~~~~i~~~s~~~e~A~~fl~~l~s~e~q~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 320 (367)
T d1ursa_ 241 TPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVEQ 320 (367)
T ss_dssp ECCCCCTTSCCCCCEEEEEEEEEBTTCSCHHHHHHHHHHHTSHHHHHHHHHHHCCEESSHHHHTSHHHHTCHHHHHHHHH
T ss_pred EECCCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCHHHHHCHHHHHHHHH
T ss_conf 63365788664310005654010210131688999999850699999999971988873767739553209389999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~t~~~al~~~~~~i~kg 367 (367)
T d1ursa_ 321 LRYAVPMPNIPQMQAVWQAMSILQNIIAGKVSPEQGAKDFVQNIQKG 367 (367)
T ss_dssp GGGCEECCCSTHHHHHHHHTTHHHHHHHTSSCHHHHHHHHHHHHHC-
T ss_pred HHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
T ss_conf 95083178785489999999999999829899999999999998576
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27641.60 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~i~~~i~g~f~E~lg~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~ 80 (367)
T d1qw9a2 1 EIDKRIYGSFIEHLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDL 80 (367)
T ss_dssp ECCGGGGEEECCSSTTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEET
T ss_pred CCCHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98824424406543573207664799998887665999999999639987865886136705212365986778886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~~~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~ 160 (367)
T d1qw9a2 81 AWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMD 160 (367)
T ss_dssp TTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSCCHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf 88876767777899999999809838999837974099999999997068988889999871887888732899635111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~g~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~~~~~iD~is~H~Y~~~~~~~~~~~ 240 (367)
T d1qw9a2 161 GPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGNRDNDTANY 240 (367)
T ss_dssp STTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHHGGGCSEEEEEEEECCTTCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 56555788999999999999998760299836999868877776555289999861311577022347778875512455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~~ 320 (367)
T d1qw9a2 241 LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITL 320 (367)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHHHHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 55677799999999999999874046778851886224564454555555554233755312237699999999999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------6
Q 001706 633 ----------------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------------~ 633 (1024)
.
T Consensus 321 ~R~sD~V~mA~~A~lvNvl~~i~~~~~~~~~~~~~y~v~~~~s~~~r 367 (367)
T d1qw9a2 321 MKHADRVKIACLAQLVNVIAPIMTEKNGPAWKQTIYYPFMHASVYGR 367 (367)
T ss_dssp HHTTTTEEEEEEECSBSSSCSEEECTTSCEEECTTHHHHHHHHHHCC
T ss_pred HHCCCEEEEEEHHHHHHHHCCEEECCCCCEEECCCHHHHHHHHHHCC
T ss_conf 97259556540337664102148659998610751199999998529
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27571.43 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~ 80 (366)
T d1hz4a_ 1 EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQM 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 94430566213999999999999888999999999999854868996799999999999999879999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 160 (366)
T d1hz4a_ 81 ARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 160 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 87501148999999888788788888999998899999986750341256788899888789998145666689999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 240 (366)
T d1hz4a_ 161 EVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTA 240 (366)
T ss_dssp HHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 87663002468999988888887646678888999999999987311572699999999999986044898999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l 320 (366)
T d1hz4a_ 241 KPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 320 (366)
T ss_dssp CCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 76224666777889999999987587999999999999887642667479999999999999878999999999999997
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~e~e~~~a~~ll~~in 366 (366)
T d1hz4a_ 321 ANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREIN 366 (366)
T ss_dssp HHHHCCCHHHHTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 6531829999999999999999998659986999999999987559
|
| >d1moqa_ c.80.1.1 (A:) "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SIS domain superfamily: SIS domain family: double-SIS domain domain: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27567.54 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~m~kEI~eQP~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~I~~vG~GsS~~aa~~~~~~~~~~~~~~v 80 (366)
T d1moqa_ 1 GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPC 80 (366)
T ss_dssp CCCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999861788999889999999999876368620543103068887308889999822899999999999998439204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~sef~~~~~~~~~~~lvI~iSqSG~s~~ti~a~~~a~~~g~~~ti~iT~~~~S~la~~ad~~i~~~~g~E~~~~~T 160 (366)
T d1moqa_ 81 DVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVAST 160 (366)
T ss_dssp EEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCS
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99965445244345699987998620589635899999999749973899989999978986074632356654220000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 k~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~~g~A~E~ 240 (366)
T d1moqa_ 161 KAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEG 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 57899999999999986442032026778779999998876889987777899899997367526996577758999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 aLKl~E~~~~~a~~~~~~Ef~HGP~~~i~~~~~vi~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 320 (366)
T d1moqa_ 241 ALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHII 320 (366)
T ss_dssp HHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEE
T ss_pred HHHHHHHHHHEEEEECHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 99999887674785037776277430230796089846898177999999999997498299996687322445775699
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~p~~~~~l~pl~~~ip~Qlla~~~A~~~G~~PD~Pr~L~K~vtve 366 (366)
T d1moqa_ 321 EMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 366 (366)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHHHHHHHTCCSSSCTTCCSCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
T ss_conf 6699756787999999999999999998198999999998785319
|
| >d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27565.42 Aligned_cols=1 Identities=100% Similarity=1.566 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~y~~~~~lR~~~Pv~~~~~~w~vt~~~~v~~vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (366)
T d1io7a_ 1 MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELR 80 (366)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
T ss_conf 90899999835998873998999689999999659400336764555554433355432235555550117857888987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~f~~~~l~~~~~~i~~~a~~ll~~~~~~~~D~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (366)
T d1io7a_ 81 SMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVAFRLGKPGE 160 (366)
T ss_dssp GGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCTTSCCCTTC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 76145565130677888899999999873135563210000000122011001687345799999999999764030146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~l~ 240 (366)
T d1io7a_ 161 IFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLY 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 78888889887665420222045665542014589999999999999714420377999999874313322233442001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~ee~~r~~~~~~~~~R~~~~d~~i~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G~r~C~G~ 320 (366)
T d1io7a_ 241 LKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGA 320 (366)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCSCCCCTTCCGGGSCTTH
T ss_pred HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 00046553000234300010210024333436789777332010025611258665418898999988788986488369
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
+
T Consensus 321 ~lA~~e~~~~l~~ll~rf~~~~~~~~~~~~~~~~~~~~~lpVrl~~ 366 (366)
T d1io7a_ 321 PLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGYKRLVVRLKS 366 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEEECCCSSBCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9999999999999999779882089865787764787554799969
|
| >d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=27564.58 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~w~d~~r~i~v~aNi~~~~d~~~a~~~GAdGIGL~RtEflfl~~~~~p~~~e~i~~~~~~~~~~~l~ 80 (366)
T d1h6za1 1 RSPDLKGSFQTILQWCQEMKRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALD 80 (366)
T ss_dssp CCSCSTTHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTTHHHHHHHHHSCSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
T ss_conf 98987458999999875378669997089999999999759984503887998618987882898763235577999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 k~~~~~~~~y~~i~~a~~~~pV~iRtlD~g~dk~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~E~NP~LG~RGiR~~L~ 160 (366)
T d1h6za1 81 KLLPIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGIT 160 (366)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCEEEECCCSCGGGGCCSSCSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf 87788999999999970899879996224322357850555543111003543555532025557884123456655414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~p~lf~~QlrAilrA~~~~~~~g~~~~l~iMiP~v~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iG~MiEvPsaal~~ 240 (366)
T d1h6za1 161 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 240 (366)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
T ss_conf 80667999999999999987528865401221206679999989999989999887504876441367641213899869
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 d~~a~~vDF~SIGTNDLtQy~la~dR~n~~v~~~~~~~~~~~~~~p~~~~~~~av~~lI~~a~~~~r~~~~~i~vsiCGE 320 (366)
T d1h6za1 241 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 320 (366)
T ss_dssp HHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99863050899601046567765301551134567765200010556606699999999999998775189981997064
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
.
T Consensus 321 ~a~dp~~~~~Li~lGi~~lSvsp~~ip~vk~a~a~~~~~~~r~~~~ 366 (366)
T d1h6za1 321 HGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRAAMK 366 (366)
T ss_dssp GGGCHHHHHHHHHHTCSEEEECGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 0239999999998699979989277699999999854998787459
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=100.00 E-value=0 Score=27564.23 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 t~~lvd~~At~~t~~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~~~v~~~tG~yPAv~G~D~~~~~~~~~~~~~~ 80 (366)
T d2bvya2 1 TIAIVDADATAETRSLLSYLDGVRGEGILFGHQHTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAE 80 (366)
T ss_dssp CBCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTSCSSSCSCCSSCCHHHHHHSSCBSEEEEETTTTTTSSTTCCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 96665888799999999999985489879986146444666687426799999976888776443114567874433223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~ 160 (366)
T d2bvya2 81 NTRDENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGT 160 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 67311489999999976306997899971377888986557741689873689970689999999999999998750478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG 240 (366)
T d2bvya2 161 LIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG 240 (366)
T ss_dssp BCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEEC
T ss_pred CCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEE
T ss_conf 86089831220379855057889998999999999999999725876169986168778865211665288987478988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~l~~~~~~a~~~~Kp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~~~~~~~~y~~~W~n 320 (366)
T d2bvya2 241 LDTYDSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMETWAN 320 (366)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHSTTTTCCSEEEECCC
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 74457888752278999999999999873699579942002578644678742589999999873721001048988548
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~p~~g~~s~~dF~~~~~dp~~~f~~~l~~~y~~~~~~~~ 366 (366)
T d2bvya2 321 FDAGQHFVPVPGDALLEDFQAYAADPFTLFASEVTGAFDRTVAAAP 366 (366)
T ss_dssp CSSSSCSSCCTTCTTHHHHHHHHHSTTEEBGGGCCSTTCCCCCBCC
T ss_pred CCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCC
T ss_conf 9988761236997469999999759566542227032147666797
|
| >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27562.99 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~f~~P~~~~~G~gal~~l~~~l~~~g~r~lvvtd~~~~~~~~~~l~~~L~~~~i~~~~~~~~~~p~~~~v~~~~~~ 80 (366)
T d1jq5a_ 1 AAERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANI 80 (366)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHH
T ss_pred CCCCEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 99858958963999039999999999974994899989857899999999999877996999981899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~D~IiavGGGs~iD~aK~iA~~~~~p~i~IPTT~gtgse~t~~avi~~~~~~~~~~~~~~~~P~~vi~Dp~l~~t 160 (366)
T d1jq5a_ 81 ARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIAN 160 (366)
T ss_dssp HHHTTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSCCSSCTTCSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHT
T ss_pred HHCCCCCEEEEECCCCCCCCHHEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHH
T ss_conf 62038868998168864422000120466535402434434320013212323567422110114557789998610432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lP~~~~~sg~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T d1jq5a_ 161 APPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTL 240 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32788898677788899999998860654323034479999999999999987468876667635658999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~g~~~~~~~~~~~H~i~h~l~~~~g~~~~~~HG~~va~g~~~~~~l~~~~~~~~~~~~~l~~~lglP~~L~dlgi~~~~ 320 (366)
T d1jq5a_ 241 LSGLGFESGGLAAAHAIHNGFTALEGEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDAS 320 (366)
T ss_dssp HHHHHHHHHCCCHHHHHHHHGGGSCSGGGGSCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCCCSTTTTTCTTCC
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
T ss_conf 60433467876645211012676237764767633779999999998428899999999999986999999994989777
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~l~~ia~~a~~~~~~~~nP~~~t~edi~~il~~a~~~~~~~~~~ 366 (366)
T d1jq5a_ 321 REDILKVAKAATAEGETIHNAFNVTADDVADAIFAADQYAKAYKEK 366 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGGTCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999840874147999999999999999999999987209
|
| >d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SelA-like domain: Hypothetical protein MJ0158 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=100.00 E-value=0 Score=27560.88 Aligned_cols=1 Identities=100% Similarity=1.666 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~r~~~~~~~~~~~i~~~g~~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a 80 (366)
T d2aeua1 1 LRLEKARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSA 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHTSTTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CCHHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 96366788899985633330275432688888864889999998438245689999999987068984479996889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia 160 (366)
T d2aeua1 81 ILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA 160 (366)
T ss_dssp HHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 99999983899979994699862419988976288677799999999736877607999945888867879999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~ 240 (366)
T d2aeua1 161 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIY 240 (366)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 00817899956721432364468987662861787136444545521589706778999999972235568779899888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV 320 (366)
T d2aeua1 241 RALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 320 (366)
T ss_dssp HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHCCE
T ss_conf 89986049999999999999999988604111133566667543457630110477760102456879999999981988
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~~~~~ 366 (366)
T d2aeua1 321 ITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFKS 366 (366)
T ss_dssp ECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 9997898889998799951655411089999999999999998459
|
| >d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Heme-dependent catalase-like superfamily: Heme-dependent catalase-like family: Allene oxide synthase domain: Allene oxide synthase-lipoxygenase protein, N-terminal domain species: Black sea rod (Plexaura homomalla) [TaxId: 47982]
Probab=100.00 E-value=0 Score=27560.50 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~HakG~ga~G~f~v~~d 80 (366)
T d1u5ua_ 1 WKNFGFEIFGEKYGQEELEKRIKDEHTPPPDSPVFGGLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVND 80 (366)
T ss_dssp CCCCHHHHHHHHHCHHHHHHHHHHHTSCCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTSCSSSCSEEEEEEEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 97620778877632577664000457899874223475431189999999865411468756654775645999998079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~f~~G~~~Pv~vRfS~~~G~~D~~~d~RG~AiKf~~~~ge~~~D~v~~n~pvF~~rd~~~F~~~~~a~k~~p~ 160 (366)
T d1u5ua_ 81 PKFPEHEFFTAGRTFPARLRHANLKYPDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEGDAA 160 (366)
T ss_dssp CCSCCCSSSCTTCEEEEEEEEEBSSCSCTTSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHHTTCCTTHHH
T ss_pred CHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 01655876179975679999258888865567877369987658987325786337774304798886888860587637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~f~~~~Pe~~~~~~~~~r~~P~s~~~~~y~s~~tf~fvn~~G~~~yvK~~~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (366)
T d1u5ua_ 161 EEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFS 240 (366)
T ss_dssp HHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCCHHHHTTTTCCS
T ss_pred HHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHCCCHHHHHHHCCC
T ss_conf 89987098999999985577999834475002261787847898899999998457776642444323722344321246
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~d~Lr~dl~~~l~~g~~~~~l~vQl~~~~d~d~~~i~D~Tk~Wpe~~~P~~~vG~ltl~~~~~~~e~EqlaF 320 (366)
T d1u5ua_ 241 RHENEKRPDDYLRKEYVERLQKGPVNYRLQIQIHEASPDDTATIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAF 320 (366)
T ss_dssp CCTTCCSCTTHHHHHHHHHHHHSCEEEEEEEEEEECCTTCCGGGGCTTSCCCTTTSCCEEEEEEEEEEECCHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC
T ss_conf 54102576377899999998679954999999546354789998887516886567637879999799897057576524
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------6
Q 001706 633 ---------------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------------~ 633 (1024)
-
T Consensus 321 ~P~~~~pgi~~~~~~~~~d~~si~~~R~~vY~~s~~~R~~~~~~~~ 366 (366)
T d1u5ua_ 321 NIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLV 366 (366)
T ss_dssp CTTCCCTTSCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8755699837778522243442888999999999998754501569
|
| >d1fn9a_ d.196.1.1 (A:) Outer capsid protein sigma 3 {Reovirus [TaxId: 10891]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Outer capsid protein sigma 3 superfamily: Outer capsid protein sigma 3 family: Outer capsid protein sigma 3 domain: Outer capsid protein sigma 3 species: Reovirus [TaxId: 10891]
Probab=100.00 E-value=0 Score=27496.46 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 MEVRlPNfHSvVE~I~nSYe~rp~~yst~egWd~~~f~~PDVIkVG~AYCCaQCCGVLGapp~~~~~FPHHrCHQq~~R~ 80 (365)
T d1fn9a_ 1 MEVCLPNGHQVVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVCGGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQ 80 (365)
T ss_dssp CCCCCCCHHHHHHHHHHHTTTCCCEEBTTTBTCCSSCCCCSEEEETTEEEETTTTEEEEEGGGTCCSCCCCCCCCCCCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 96446771149999998874577644520131454314876599867587400154336786678607613676776404
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 dtPLLrfvgRvTaH~KRgmLd~~a~~~~~i~D~~~e~~~rv~~egg~lvE~~~~~lD~~s~~~SI~sdWT~PLe~~~dlD 160 (365)
T d1fn9a_ 81 DYVDVQFADRVTAHWKRGMLSFVAQMHEMMNDVSPDDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLD 160 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCCEEEECCGGGSSTTSTTTCTTCCTTSCCCCCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHCCCCCC
T ss_conf 75577655578887765279999999999873077776676636886331333421606653334304677201014420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 tr~D~~~tal~~MIDsSdl~pnf~mrdpshafngvkl~gdarqt~fsrtf~~rsslewgvmvydysele~dp~kgr~yr~ 240 (365)
T d1fn9a_ 161 TKLDQYWTALNLMIDSSDLIPNFMMRDPSHAFNGVKLGGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGRAYRK 240 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTCEESSEESCTHHHHTTSCBCGGGGGCCCCSSCCTTSCCCCCCEEECCHHHHHCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHH
T ss_conf 35789999888600165305332415833322662005740002000025776631444799765663368544502355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 elvtpardfghfglshysrattp~lgkmpavfsgmltgnckmyp~i~gtak~kt~~kl~~avn~~wgvekirya~gpgg~ 320 (365)
T d1fn9a_ 241 ELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCKMYPFIKGTAKLKTVRKLVEAVNHAWGVEKIRYALGPGGM 320 (365)
T ss_dssp HHTSTHHHHCCGGGCCCCEEECCCSTTCCEEECCGGGTSCCEEECCCHHHHHGGGHHHHHHHHHHSCHHHHHHHHCTTHH
T ss_pred HHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
T ss_conf 53673021364441000223671002562565310147621431023620024378899987745403420221168863
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 tgwy~rtmqqapivltpa~ltmfpdt~kfgd~~~pvmigdpmi~g 365 (365)
T d1fn9a_ 321 TGWYNRTMQQAPIVLTPAALTMFPDTIKFGDLNYPVMIGDPMILG 365 (365)
T ss_dssp HHHHHHHHHHHHHHTSCGGGGCCCSSCSSCSSSSCEEECCCEEEC
T ss_pred CHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 324443453088673468850277742135667863317864369
|
| >d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27493.69 Aligned_cols=1 Identities=0% Similarity=1.134 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 Mns~G~~~r~tt~GESHG~~ig~vIdG~PaGl~i~~e~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtG~PI~ 80 (365)
T d1um0a_ 1 MNTLGRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIG 80 (365)
T ss_dssp CCEECSSSEEEECCSCCSSEEEEEEECCCBTCBCCHHHHHHHHHHHTTCCSSCCCHHHHSCEEEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCCE
T ss_conf 98764422788515578884489992408688858999999986679999998766899982799027368826577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~~~v~~IG~i 160 (365)
T d1um0a_ 81 FLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGI 160 (365)
T ss_dssp EEEECCCSCCCCCCCCTTBCCTTSTHHHHHHHHCCCCCCCTTCSTHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEETTE
T ss_pred EEECCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
T ss_conf 55414656751456664257777761111100785367888618899999999999999988875471589999944544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gv~~~~g~P~GlG~P~f~kLda~LA~A~mSI 240 (365)
T d1um0a_ 161 KAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYAKLDAKIAEAMMGL 240 (365)
T ss_dssp ECSSCCHHHHHHSTTCBSCHHHHHHHHHHHHHHHHTTCCBCEEEEEEEEESSTTCCCCSCCSBTTTBCHHHHHHHHHHTS
T ss_pred CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 45431011202444036872667888999999985188768668999855643444786557876421236999877425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 pAvKgVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~aGGi~GGiSnG~pI~~rva~KP~sSI~~pq~Tvd~~~~e~~~~~~ 320 (365)
T d1um0a_ 241 NGVKAVEIGKGVESSLLKGSEYNDLMDQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLK 320 (365)
T ss_dssp TTEEEEEETTGGGGGGSBHHHHCCCEETTEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCEEEEBTTSCEEEECCC
T ss_pred CCEEEEEECCCHHHHHCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEC
T ss_conf 33235641454666652576506732478874567785105767887669999957875567755435779987776016
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 gRhDpCivprA~~V~EAm~alvlaD~~L~~~~~~~~~~k~~~~~~ 365 (365)
T d1um0a_ 321 GRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN 365 (365)
T ss_dssp SCCCSCTHHHHHHHHHHHHHHHHHHHHHHGGGSBHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988970726528999999999999999997563599999874179
|
| >d2pnwa1 b.52.1.4 (A:5-369) Membrane-bound lytic murein transglycosylase A, MLTA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=27492.59 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 f~l~pvsf~~LPGW~~Dd~~~al~Af~~SC~~l~~~~~~~~~~~~~t~~~~~~~c~~a~~~~~~~~~~aR~Ffe~~F~py 80 (365)
T d2pnwa1 1 FSIDEVSFRDLPGWGQDDPRKLFPAMATILSHLRNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPF 80 (365)
T ss_dssp CEEEECCGGGSTTGGGCCCTTHHHHHHHHHHHHTSSCCCCCCTTCCCHHHHHHHHHHHHHCCCCSHHHHHHHHHHHEEEE
T ss_pred CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE
T ss_conf 96337188778894112499999999999998721785545666778999999999998535699899999999718899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~~~~~~~Gl~TGYYEP~l~gS~~~~~~y~~PlY~~P~dLv~vdl~~f~~~l~~~~~~gR~~~~~~~py~~R~~I~~g~ 160 (365)
T d2pnwa1 81 RISPAQGKSGFVTAFYEPELEVSATPDDVWRYPIYRRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGC 160 (365)
T ss_dssp EEEC----CEEEEEEEECEEEEESSCCSSSCEEEEBCCTTEEECCTTTCCTTCCTTCCEEEEETTEEECCCCHHHHHTTT
T ss_pred EECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
T ss_conf 94048987536898667767000378988987744689531006622255434665302443168766777445554465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~g~elaw~~d~vd~fflqIQGSgrv~l~dG~~~rv~yag~NG~pY~sigr~Li~~G~i~~~~~sm~~ir~wl~~nP~ 240 (365)
T d2pnwa1 161 LRGRGLEIAWARSKVDLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWLADHPD 240 (365)
T ss_dssp TTTSSCEEEEESCHHHHHHHHHHTEEEEECTTSCEEEEEEEEECSCCCCCHHHHHHHTTCSCTTTCCHHHHHHHHHHCGG
T ss_pred CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHCHH
T ss_conf 46778623673685777886303617999089998999871678986505679998768878210799999999997969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~ll~~N~syvFFr~~~~~~~~~Gp~Ga~gvpLtp~rSiAvD~~~~plG~p~~l~~~~~~~~~~~~~~~rl~~aqDTG 320 (365)
T d2pnwa1 241 EVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFFIHAPTLTHLDDGKPFARLMLALDTG 320 (365)
T ss_dssp GHHHHHTTCCCCEEEEEC-------CCBCTTSSBCCTTTEEECCTTTCCTTCEEEEEETTCCTTTTTSCEEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999860997599887788776789756137120125035405542578865999656777689987100669997446
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 gAIkG~~R~D~f~G~G~~A~~~Ag~~~~~g~~~~Llpk~~~~r~~ 365 (365)
T d2pnwa1 321 SAIVGPARGDIFTGSGFEAGELAGTVRNEADFYILLPRIAAERYR 365 (365)
T ss_dssp TTCCSTTEEEEEEEESHHHHHHHHTCEEEEEEEEEEEHHHHGGGC
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCHHHHCC
T ss_conf 523689726997408889998860768744799998734354439
|
| >d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Pyruvate dehydrogenase E1-alpha, PdhA species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27492.86 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~p~ls~e~l~~~yr~M~l~R~~e~~~~~l~~qG~ig~~h~~~GqEa 80 (365)
T d1w85a_ 1 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEA 80 (365)
T ss_dssp CCCCCHHHHHHHHHHTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHH
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 98797433321022139769999999999885457999999999999999999999999999997799656008898699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~vg~~~~l~~~D~i~~~yR~hg~~la~G~~~~~~~~~~~G~~~g~~~~~~~~~~~~~~ivG~~~p~AvG~A~a~k~~~~ 160 (365)
T d1w85a_ 81 SQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK 160 (365)
T ss_dssp HHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGGGGCCCTTCCBCCCCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCEEEECCCCHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99999986797687631366112255569999999986279988667888755605533357666412567765643046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~~aist~~~~~~~~~~~~~r~~~~Gi~~~~vDG~D~~~v~~ 240 (365)
T d1w85a_ 161 KAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYA 240 (365)
T ss_dssp SCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf 88146631677643126888887764336674379997024333322202133211111012357617981440687999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~~~A~~~~R~g~gP~lie~~tyR~~gHs~~dd~~~~YR~~eEi~~w~~~DPI~~~~~~L~~~g~~~~~el~~i~~e~~~ 320 (365)
T d1w85a_ 241 AVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKE 320 (365)
T ss_dssp HHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999997423796179974134356667868863124774789998848989999999998799999999999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 eV~~A~~~A~~sP~P~~~~l~~~Vy~e~p~~l~eq~~~~~~~~~~ 365 (365)
T d1w85a_ 321 EIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 365 (365)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999868998989998453238998899999999887469
|
| >d1u1ha2 c.1.22.2 (A:396-760) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27489.91 Aligned_cols=1 Identities=0% Similarity=-0.826 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~lpTT~VGS~PRp~eLk~a~e~~~~G~is~eel~~~~~~ai~~~v 80 (365)
T d1u1ha2 1 EGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVV 80 (365)
T ss_dssp THHHHHTTTTSSCCCSSSCCHHHHHHHHHHHSCCCSSCBBCCSBCCCCSCCC-------------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 96899988089865267983789999999847999986232477889989999999976699999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~Q~~aGidiItDGE~~r~d~~~~f~~~l~G~~~~~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~~~~~~k 160 (365)
T d1u1ha2 81 DLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 160 (365)
T ss_dssp HHHHTTCCSBBCCBCTTCSCTTHHHHTTSTTEECCSSCCEEEETTEEECCCEECSCCCCCSCSSHHHHHHHTTSCSSCBE
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99998479967639813035999999752670000464157469711066041475446676408999998850122234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~i~gp~~l~~~~~~~~y~~~~e~~~dLa~ay~~el~~L~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 240 (365)
T d1u1ha2 161 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN 240 (365)
T ss_dssp EEEECHHHHHHTSEECSSSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTTTTTCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45550368853126668899899999999999999999996699389957628764321242159999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~v~~~~~~g~~~~~~~~l~~l~vd~l~le~~~~~~~~l~~~~~~~p~~K~l~~GVVd~r~~~~E~~e~v~~ri 320 (365)
T d1u1ha2 241 CGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRV 320 (365)
T ss_dssp TTSCTTSEEEEEESCSCCTTTHHHHHTTCCSEEEECCSSSCGGGGGGTSSSSCCCSEEEECCSCTTSSSCCCHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 43566655899732655412478885477420001103586278887775288998899888827999879999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~a~~~v~~erl~lspdCGf~~l~~~~a~~KL~~lv~~a~~vr~e 365 (365)
T d1u1ha2 321 NKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQ 365 (365)
T ss_dssp HHHHTTSCTTTBCBCCSSCCTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999973885539981888999799899999999999999999659
|
| >d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RPA4359-like domain: Hypothetical protein RPA4359 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=100.00 E-value=0 Score=27489.44 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~L~~~i~~~i~~~G~i~f~~fM~~~LY~p~~GYY~~~~~iG~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~~~~ 80 (365)
T d1zkda1 1 IDQTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 80 (365)
T ss_dssp CCSSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 97207899999999956985599999997079986344789978899886788734799999999999999997177766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l~~~~~i~w~~~~~~~~~~~g~iiaNE~fDA 160 (365)
T d1zkda1 81 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFDV 160 (365)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEEEEECCCCCC
T ss_conf 16995188611788866554123311355405898435456778898874166540111474243558759993255755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lPv~~~~~~~~~~~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~G~~l~i 240 (365)
T d1zkda1 161 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRDQGGAALII 240 (365)
T ss_dssp SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHHHCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 00128997475421322232255204776310212467763033443147886323565899998765666405653433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 DYG~~~~~~~~~l~~~~~h~~~d~l~~pG~~DIT~~VnFs~L~~~~~~~g~~~~~~~tQ~~FL~~~GI~~~~~~l~~~~~ 320 (365)
T d1zkda1 241 DYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAKAT 320 (365)
T ss_dssp EEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 10045554444203344443366213898753265118899999987458615234358999997889999999975399
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~Li~p~~~~MGe~FKVl~~~~~~~~~~~gf~~~ 365 (365)
T d1zkda1 321 PQVSEDIAGALQRLTGEGRGAMGSMFKVIGVSDPKIETLVALSDD 365 (365)
T ss_dssp HHHHHHHHHHHHHHHCEETTEETTTEEEEEEECTTCCCCTTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCHHCCHHEEEEEEECCCCCCCCCCCCC
T ss_conf 889999999999726988100211279999817999988898999
|
| >d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=100.00 E-value=0 Score=27489.95 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~k~~r~~l~fdDVllvP~~st~~s~~vdl~~~it~~~~~~iPIIsA~MDtV~~~~mA~~ls~~Gglgvlhr~~~~~ 80 (365)
T d1zfja1 1 SNWDTKFLKKGYTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSIT 80 (365)
T ss_dssp CGGGGSSCCCCCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHH
T ss_pred CCCCHHHHHCCCCCCEEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCHH
T ss_conf 97211223026880108985787776776726237964895268988978988768889999999779916974866789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 e~~~~~~~~~~~~~~~~v~aavGv~~~~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~~~~~~iIaGNV~T~e 160 (365)
T d1zfja1 81 EQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAE 160 (365)
T ss_dssp HHHHHHHHHHHHTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHH
T ss_conf 98877665443037569999944681277899999986998899978865543214788999865887644411343489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~a~~L~~aGaD~VkVGiG~Gs~CTTr~~tGvGvPq~sai~~~~~~~~~~~~~iIADGGi~~~GDi~KAla~GAd~VMlG~ 240 (365)
T d1zfja1 161 GARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 240 (365)
T ss_dssp HHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf 99999866976378640256445676301342242138999999997579569805884762066655321587898642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~lAg~~EsPG~~~~~~g~~~k~~~Gm~s~~a~~~~~~~r~~~~~~~~~~~~~~eG~~~~v~~~G~~~~~~~~l~gglrs~ 320 (365)
T d1zfja1 241 MFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSG 320 (365)
T ss_dssp TTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 21046678974797778475552775557555456644434455443221224684478546787789999999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
-
T Consensus 321 m~y~G~~~l~e~~~~~~fv~vt~~~~~E~~~h~~~~~~~~~~y~~ 365 (365)
T d1zfja1 321 MGYVGAGDIQELHENAQFVEMSGAGLIESHPHDVQITNEAPNYSV 365 (365)
T ss_dssp HHHTTCSSHHHHHHHCCEEECCHHHHHHHSCCSSCCSSCBTTBC-
T ss_pred HHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 762487749999629889999922010258862577157899869
|
| >d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Fe-only hydrogenase superfamily: Fe-only hydrogenase family: Fe-only hydrogenase domain: Fe-only hydrogenase, catalytic domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=100.00 E-value=0 Score=27487.29 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~i~~v~~~l~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~~~ 80 (365)
T d3c8ya1 1 HMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIEN 80 (365)
T ss_dssp CHHHHHHHHHCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97899999968995899998927899999984899430028999999998699999983788899999999999999865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~P~isS~CPg~V~yiEk~~PeLip~ls~v~SP~~~~g~liK~~~~~~~~~~~~~i~~V~I~PC~aKK~Ea~r~e~~~ 160 (365)
T d3c8ya1 81 NGPFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEK 160 (365)
T ss_dssp TCSCCEECCCCHHHHHHHHHHCGGGGGGBCCBCCHHHHHHHHHTTHHHHTTCCCGGGEEEEEEESCSHHHHHHTCTTSEE
T ss_pred CCCCCEEEECCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
T ss_conf 89987598479899999999675653325678888999999999987876099911289999834643224542821245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~dVD~VLT~~El~~~l~~~~i~~~~l~~~~~~~~~~~~s~~g~~~~~sGG~~~~~~~~~~~~~~~~~~~~~~~~~~r 240 (365)
T d3c8ya1 161 DGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVR 240 (365)
T ss_dssp TTEESCSEEEEHHHHHHHHHHTTCCGGGCCCCCCCGGGTCCCHHHHTTTSTTHHHHHHHHHHHHHHHTCCCSCCCCGGGC
T ss_pred CCCCCCCEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECC
T ss_conf 78987488953999999999759992238886668766777866512123663999999998774368865552024306
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~~~i~~~~~~~~~~~~~~~~v~G~~n~~~~l~~~k~~~~~~~fvEvmACpgGCinGgGq~~~~~~~~~~~~~~~~r~~~ 320 (365)
T d3c8ya1 241 GLNGIKEAEVEINNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASV 320 (365)
T ss_dssp SSCSEEEEEEEETTEEEEEEEEESHHHHHHHHHTSGGGSSCCCEEEEESSTTSGGGCTTSCCCCHHHHHHSCHHHHHHHH
T ss_pred CCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87751899997089178999960299999999987459999728998068998707998688896013268999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
.
T Consensus 321 l~~~d~~~~~r~~~en~~~~~ly~~~l~~p~~~~~~~lLHT~y~~ 365 (365)
T d3c8ya1 321 LYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKYKK 365 (365)
T ss_dssp HHHHHHHCSCCSGGGCHHHHHHHHHTTCSTTSHHHHHHSBCCCCC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
T ss_conf 875430377788855999999999986799838999972687029
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=100.00 E-value=0 Score=27485.17 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~ 80 (365)
T d1jofa_ 1 PLHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEEEC
T ss_conf 91199999314999899999858889389845445168999777999489899999938947899990899769876412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~ 160 (365)
T d1jofa_ 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 89986789987899879999932799789986745788742068664033004764675568898115978889999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T d1jofa_ 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEECCCCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCC
T ss_conf 82079987999970688716652511112788740899988998669995158998999995598753778731240245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~ 320 (365)
T d1jofa_ 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCC
T ss_conf 56556665444435776316998999978997135787542279999856887144676766777679986478964899
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------6
Q 001706 633 --------------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------------~ 633 (1024)
+
T Consensus 321 G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~vp~p~~~~~~~w~~ 365 (365)
T d1jofa_ 321 DEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIWYD 365 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEECC
T ss_conf 999999967999499999828867278999889999976879639
|
| >d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=0 Score=27413.08 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~tP~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~v~~~~~~~~~~~~~~~~~ 80 (364)
T d2jera1 1 AKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQNCRRQLPPE 80 (364)
T ss_dssp CCBCCSCCHHHHTCBCCCTTSCEEEEEEECCCCTTTSGGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC
T ss_conf 98456899111387748995500328997689985204677999999999999985887399997928999999757566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 v~~~~~~~dD~W~RD~GPi~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~D~~~~~~ia~~~~~~~~~~~~lvlEGG~i 160 (364)
T d2jera1 81 ITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSF 160 (364)
T ss_dssp SEEEECCCSSSCHHHHSCEEEECTTSCEEEEEEECCTTTHHHHCSSSCCTTGGGHHHHHHHHHTCCEEEEEEEECCGGGE
T ss_pred EEEEECCCCCHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCE
T ss_conf 49999368875764551389991677567633664687655555555410278999999998366544665737748966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~dG~GtlltTe~~ll~~nRNp~ls~~~ie~~Lk~~LGv~~viwl~~gl~~DdTdGHID~~arFi~~~~il~~~~~d~~~ 240 (364)
T d2jera1 161 HVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQNS 240 (364)
T ss_dssp EECSSSEEEEEHHHHTSTTTCTTSCHHHHHHHHHHHHTCSEEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCCTTS
T ss_pred EECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC
T ss_conf 97799639975455514578999899999999999869863677658755677777754448994799569984388878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~L~~~~da~G~~~~i~~lp~P~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP~fg~ 320 (364)
T d2jera1 241 PFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGD 320 (364)
T ss_dssp TTHHHHHHHHHHHHTCBCTTCCBCEEEEECCCSSCEECCTTSCCCCCTTSCCCCTTCEECCCTTCCEEETTEEEEEECSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCC
T ss_conf 35799999999997656534898558862689742333333344534575435689886202578999999999902798
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~D~~Al~~l~~~fP~r~Vv~I~~~~i~~~gG~iHCiT~q~P~~ 364 (364)
T d2jera1 321 ENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIHXITQQEPKR 364 (364)
T ss_dssp TTHHHHHHHHHHHSTTSEEEEEECHHHHTTTCCTGGGCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCC
T ss_conf 77899999999888899799971089875698014463127999
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=27412.43 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a 80 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA 80 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 96999992789936622589875996799758735789985477788564999998999998999999996698503552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 YGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~ 160 (364)
T d1sdma_ 81 YGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMV 160 (364)
T ss_dssp ECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 23478776201656766551367899998865531034655369999888723632233576545554433133146760
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~~~~~~ 240 (364)
T d1sdma_ 161 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGS 240 (364)
T ss_dssp EEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCCCC---
T ss_pred CCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECHHHCCCCCCCCC
T ss_conf 20353000117788978986406600044534354103336359999999703676503567998404100352001466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak 320 (364)
T d1sdma_ 241 AGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVR 320 (364)
T ss_dssp ------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 67502332335643206899999997499757730112138878634999509999996987001899999999999984
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
.
T Consensus 321 ~i~n~p~~n~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~l~~e 364 (364)
T d1sdma_ 321 SIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364 (364)
T ss_dssp TCCCCCCCCEECHHHHHHHTTTTCC-----------CCEECCCC
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 20667835579899999999999999998744027799997559
|
| >d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]
Probab=100.00 E-value=0 Score=27412.16 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~pLFsP~~ig~~~LkNRiv~apm~~~~a~~g~p~~~~~~~y~~rA~gGgliite~~~V~~~g~~~~~~~~l~~d~~ 80 (364)
T d1icpa_ 1 QVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQ 80 (364)
T ss_dssp CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEECCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCEECHHHH
T ss_conf 99898899972489999678427524489858999797999999999983964999710788873357999853134344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 i~~~k~l~~~ih~~g~~~~~QL~H~Gr~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~~f 160 (364)
T d1icpa_ 81 VEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEF 160 (364)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 45677888886237882577640477554554445788875323456531112346565678887311066799999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~aA~rA~~AGfDgVeIH~ahGyLl~QFlSp~tN~RtDeYGGsleNR~Rf~~Eii~aIr~~~g~~~i~~r~s~~~~~~~~ 240 (364)
T d1icpa_ 161 RVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEA 240 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
T ss_conf 99999999839986898305762131200110077675444204320167898765420124886466886043224677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~vi~~g~~~~~~ae~~l~~g~aD~V~~ 320 (364)
T d1icpa_ 241 GDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 320 (364)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEHH
T ss_conf 67516777889987752032245665158655455455447889999986478789978989999999998699765056
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
.
T Consensus 321 gR~~iadPd~~~k~~~g~pi~~~~~~~~~~~~~~~g~~~~p~~~ 364 (364)
T d1icpa_ 321 GRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 364 (364)
T ss_dssp SHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 79999790499999709998988611342799998848798889
|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpX species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27411.94 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvG 80 (364)
T d1um8a_ 1 LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSG 80 (364)
T ss_dssp CCSCCCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSS
T ss_pred CCCCCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 97779887999999589623808999999999998998887788764044443311112233456787532441899863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 KTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~ 160 (364)
T d1um8a_ 81 KTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSG 160 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------C
T ss_pred HHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 78999999864435331112220144316676312103445420245899865463010166653134544555512214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d1um8a_ 161 EGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILH 240 (364)
T ss_dssp HHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGG
T ss_pred HHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 38898645540586122587778767764168996113455411131014566543014454310001100124666530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~G 320 (364)
T d1um8a_ 241 LVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTG 320 (364)
T ss_dssp GCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCC
T ss_conf 24578776530079999872301557402099999999879999999999998757927999899999999956587778
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
+
T Consensus 321 AR~L~riie~~l~~~~f~~p~~~~~~v~I~~~~V~~~~~~~~i~ 364 (364)
T d1um8a_ 321 ARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIA 364 (364)
T ss_dssp GGGHHHHHHHHHHHHHHTGGGGTTSEEEECHHHHTTSSCCEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCCCEEEC
T ss_conf 36789999999999855587789999997778867998881439
|
| >d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 8, HDAC8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27411.92 Aligned_cols=1 Identities=0% Similarity=0.603 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~pvyiy~~~~~~~~~~hP~~P~R~~~~~~ll~~~gl~~~~~~v~p~~At~~el~~vHs~~Yi~~l~~~~~~~~~~~~~~ 80 (364)
T d1t64a_ 1 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS 80 (364)
T ss_dssp CCCEEECCHHHHHHHTCSSSSCCHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHCSSCCTTT
T ss_pred CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98869969888416799898829999999999974996688896889799899998299999999998604026444112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~l~~d~p~~~~~~~~~~~~aG~~l~A~~~~~~g~~~~a~~~~gg~HHA~~~~a~GFC~~NdvaiA~~~~~~~~~RV~ 160 (364)
T d1t64a_ 81 IEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERIL 160 (364)
T ss_dssp TTTTCBTTBCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTCSCEE
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
T ss_conf 01067888887703999999985028999999875986500345754464333444454555689999999985103079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 iiD~DvHhGnGtq~iF~~d~~V~~~SiH~~~~~~~Pgtg~~~e~G~g~g~~~~~NvPL~~g~~d~~y~~~~~~~i~~~~~ 240 (364)
T d1t64a_ 161 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQ 240 (364)
T ss_dssp EEECSSSCCHHHHHHHTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98523577776044420687544533345567778898873105876445632334125565738999999976678862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~~~p~~~~~~GGY~~~~~ar~w~~~~~~l~g~~~~~~~P~ 320 (364)
T d1t64a_ 241 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 320 (364)
T ss_dssp HHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCCCCSBCCC
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 57998899989714778997778727998999999999835998799979888878999999999999859988866898
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~p~~~~~~~~~~~~~~n~~~~~~~i~~~i~~~l~~~~ 364 (364)
T d1t64a_ 321 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 364 (364)
T ss_dssp CTTGGGGTTTCBSCCCCCSCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 50155409973136686656566999999999999999987429
|
| >d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=27410.79 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~waD~~r~~~v~aN~~~~~d~~~A~~~GAdGIGL~RTEflfl~~~~~p~~~~~~~~~~~e~~~~ 80 (364)
T d1kbla1 1 IETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREE 80 (364)
T ss_dssp CCEECCCCCHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHTTCCSEEEECCTHHHHSHHHHHHHHHHHHCCSHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 99768887448999999877467107998289999999999769971548888998727876540566663367266799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~q~~~y~~i~~~~~g~pvtiRtlD~g~dk~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~E~NP~LG~RGiR~ 160 (364)
T d1kbla1 81 ALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRL 160 (364)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTTCCEEEECCCSCGGGGSCCSHHHHHHHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998887877899999860898679851568864467873156899998739987887665424455784224433213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~~p~lf~~QlrAilrA~~~~~~~~g~~~~~~Im~Pmv~~~~E~~~~k~~i~~~~~~l~~~~~~~~~~~iG~MiE~Psa 240 (364)
T d1kbla1 161 AVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRA 240 (364)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHH
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
T ss_conf 42665236888999999999978843875431441131304999999998888899997530387766148775011599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 al~~d~~~~~vDF~SIGTNDLtQy~la~dRd~~~~~l~~y~~~~i~~~dP~~~~~~~av~~lI~~~~~~~~~~~~~i~vs 320 (364)
T d1kbla1 241 ALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCG 320 (364)
T ss_dssp HHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 97189987327679963306878887433253255665554420022375104406999999999999999737998699
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
.
T Consensus 321 iCGE~asdp~~~~~L~~lGi~~lS~sp~~vp~~r~a~aqa~~~~ 364 (364)
T d1kbla1 321 ICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN 364 (364)
T ss_dssp ECSGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 71731159999999998699989978046699999999987439
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27409.42 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 97776851018842889099999999999799999984587542667999999999999985089985889999999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCC
T ss_conf 88999991489838999873255327899999999999999999779622044422167858896798220102333788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 240 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 64331134554216876038999844104677899999985999888899899999998604688878877899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d1omwa3 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 320 (364)
T ss_dssp HHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------------CCCCSSSSGG
T ss_pred HHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHH
T ss_conf 99856698880887435799997491023789879962889959379988888687454665881011379889757899
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~q~~~ 364 (364)
T d1omwa3 321 YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGH 364 (364)
T ss_dssp GTTCCEECHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
T ss_conf 84687657637788888876644526578888642271633389
|
| >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27407.36 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~m~~~~~~P~rii~G~gal~~l~~~l~~~g~r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~v~~~~~~~~~i~~~~~~~ 80 (364)
T d1kq3a_ 1 HMITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLV 80 (364)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHHTTCSEEEEEECHHHHHHTTCTTGGGGCSSSEEEEEECCSSCBHHHHHHHHTTC
T ss_pred CCCCCEECCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 99755778978798059999999999973993899989865564799999998886698699618989807999999975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~D~IIavGGGs~~D~aK~ia~~~~~P~I~IPTTa~tgse~t~~avi~~~~~~~k~~~~~~~~P~~viiDp~l~~t~P 160 (364)
T d1kq3a_ 81 EEETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAP 160 (364)
T ss_dssp CTTCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSCCCSCTTSSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHHSC
T ss_pred HCCCCEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCHHHHHHH
T ss_conf 20576899813675410101223334210124225433332446513786326775311200244533887716666435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 240 (364)
T d1kq3a_ 161 ARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLS 240 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88886217888653777765554214001015555568999999999999988887777640337999999999877875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~~~~~~~~~~~H~~~~~~~~~~~~~~~~HG~~va~~~~~~~~~~~~~~~~~~~i~~l~~~lglP~~L~elGi~~~~~~~ 320 (364)
T d1kq3a_ 241 GLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDED 320 (364)
T ss_dssp HHHHHHHCCCHHHHHHHHHTTSGGGTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCSGGGGTCTTCCHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHH
T ss_conf 34213445566520002254523764202107899889999875406799999999999985999989992999998999
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
=
T Consensus 321 l~~ia~~a~~~~~~~~~~P~~~t~edi~~il~~A~~~~~~~~~~ 364 (364)
T d1kq3a_ 321 LMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL 364 (364)
T ss_dssp HHHHHHHHTCTTSGGGGSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998727775658996899999999999999998875579
|
| >d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SepSecS-like domain: Selenocysteinyl-tRNA synthase (SepSecS) species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=27407.21 Aligned_cols=1 Identities=100% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~n~~~~~~~~~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e~~~~t~g~t~a~~~~~~ 80 (364)
T d2e7ja1 1 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMH 80 (364)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 97566841027968999999999984477510034666411135708999999999998695979997969999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~ 160 (364)
T d2e7ja1 81 SLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVK 160 (364)
T ss_dssp HHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHH
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCH
T ss_conf 98679967974046431110688851211798630356433257999976655410467716999605779984552311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d2e7ja1 161 KIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGC 240 (364)
T ss_dssp HHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTC
T ss_pred HHEECCCCCCCHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 00000023321111144323444320133332213530331012788888999988799999985156657663333310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d2e7ja1 241 TARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRE 320 (364)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHH
T ss_conf 03235799999999988999999987777788999999975986457888876559983541477789753256677988
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
|
T Consensus 321 l~~~~~~~~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~ys 364 (364)
T d2e7ja1 321 LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS 364 (364)
T ss_dssp HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 87658713457876269980567999999999999999999759
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=100.00 E-value=0 Score=27407.11 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~l~~~~~~~f~~G~av~~~~~~~~~~~~~~~~~~~~~~~fn~~t~eN~mKW~~iep~~G~~nf~~~D~~v~~a 80 (364)
T d1us3a2 1 AYSANVDHLRDLAPSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWA 80 (364)
T ss_dssp CCCCCCSCGGGGCSSSCCEEEEEBCTTCTTTBTTTCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 97564358999703689478885276555422246778999999768823165467768855889836838999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~gi~v~GH~lvW~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~ 160 (364)
T d1us3a2 81 TENNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAF 160 (364)
T ss_dssp HHTTCEEEEEEEEECCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHH
T ss_pred HHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 98889899950687865578643235786579999999999999987524688357999860444578876556666437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~~~i~~~ 240 (364)
T d1us3a2 161 YVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAA 240 (364)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 77708833999999999998640343211565334663134678999999986899655532410025799998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D~~sW~~ 320 (364)
T d1us3a2 241 MKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLD 320 (364)
T ss_dssp HHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHHH
T ss_pred HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 99998549905887404741467665444444688875899999999999999998455623455699815874876556
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~~~~~~~lL~d~d~~pKPAy~av~~~L~g~~~~~~~ 364 (364)
T d1us3a2 321 GLYREQFEDEKISWPLLFDNNYNDKPALRGFADALIGTQCTNTH 364 (364)
T ss_dssp HHTTTTTTTCCCCCCSSBCTTSCBCHHHHHHHHHHHTCCCCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 87777666666687866889989988999999997799887889
|
| >d1oc7a_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Humicola insolens, Cel6a [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Humicola insolens, Cel6a [TaxId: 34413]
Probab=100.00 E-value=0 Score=27406.99 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~p~~gNPf~g~~~yvnP~~~~~v~~~a~~~~~d~~~~a~~~~va~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 80 (364)
T d1oc7a_ 1 APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ 80 (364)
T ss_dssp CCCCSCTTTTCEECCCHHHHHHHHHTTGGGCCCHHHHHHHHHHTTSCCCEEECSGGGTTTHHHHHHHHHHHHHHTTCSSC
T ss_pred CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99789988898332474077899999873468988999999985378279711477777522778999999987214788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~lVvY~iP~RDC~a~as~Ge~~~~~~g~~~y~~Yid~I~~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~ 160 (364)
T d1oc7a_ 81 YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST 160 (364)
T ss_dssp EEEEEEECCCTTCSTTSSSCCCCCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECTTSTHHHHHCTTSHHHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 51389994799987320004897545766468899999999999975688634999777622223306880666778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~i~yAi~~l~~pnv~vYlDaGhsgWLgw~~n~~~~a~~~a~~l~~ag~~~~vrGFatNvsNy~~~~~~~~~~~~~~n 240 (364)
T d1oc7a_ 161 YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN 240 (364)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEECCCTTTTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTCCCCSSCSSCCGGGTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999997169973899978877666760001268999999998647864343378704477666667887544578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~dE~~y~~~l~~~l~~~G~~~~fvIDTsRNG~gp~~~~~~g~WCN~~GaglG~rPt~~t~~~~vDA~lWIKpPGESDG 320 (364)
T d1oc7a_ 241 PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG 320 (364)
T ss_dssp SCCSHHHHHHHHHHHHHHTTCCCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 76259999999999997458887448870467889877778888779999826889978999877677887588847788
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~~~~D~~C~~~~a~~~aP~AG~Wf~~~f~~Lv~NA~P~f 364 (364)
T d1oc7a_ 321 TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF 364 (364)
T ss_dssp CCCTTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 88876666676667655789998677752999999997268999
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=27411.11 Aligned_cols=1 Identities=0% Similarity=1.533 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~ripsl~~~~~~~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~ 80 (364)
T d1w0pa3 1 VIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPI 80 (364)
T ss_dssp EEECTTCEEEEEEECSSSTTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE
T ss_conf 93468973547989807899899999623378998655896459999937897589998883158877786534577699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 160 (364)
T d1w0pa3 81 YDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIVNPGPGHGITLTRQQNISGSQNGRLIYPAI 160 (364)
T ss_dssp EETTTTEEEEEEEEEETTCCSGGGCCCTTSCCEEEEEEEETTTTEECCCEEECCSSCCEECCCCTTSTTCCTTCEEEEEE
T ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 97999969999975178877566455355448579986579998512352146420003505797120351992999788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~l~~~~R~~~~~~~~~~~~~~~~~~ 240 (364)
T d1w0pa3 161 VLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQF 240 (364)
T ss_dssp EESSSCEEEEEEEESSSSSSCEECCCCCCCEEESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 50578885037885168857886455676665334544345788722699965865678998157865577688975999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~gR~~~~l~~S~D~G~TW~~~~~l 320 (364)
T d1w0pa3 241 LSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQL 320 (364)
T ss_dssp EESSSSSSCEEEEEEEGGGSTTCCSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEEEC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEE
T ss_conf 97589842235546753335776788632014776057896389996787876577860125999984799679997497
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------6
Q 001706 633 -------------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------------~ 633 (1024)
+
T Consensus 321 ~~g~~~Ys~~~~~~~g~~~~~ye~~~~~i~~~~~~~~~l~~~~~ 364 (364)
T d1w0pa3 321 VNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLT 364 (364)
T ss_dssp CSSBCCSEEEEECSSSEEEEEEECGGGCEEEEEEEHHHHGGGTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEHHHHHCCCC
T ss_conf 28997787327928998999999499838999987999521059
|
| >d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27343.16 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~s~~e~l~~eA~~Fi~~~y~e~~~~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V~D~ 80 (363)
T d1m7va_ 1 GSHMEILWNEAKAFIAECYQELGKEEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDR 80 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
T ss_conf 97678999999999999998648632489999999999974177438999998878998714552323002275725656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 R~v~t~~~m~eal~~Hl~~AtN~G~Ir~~ITVF~p~~~~~~~~RIwN~QLirYAGY~~dg~iiGDP~~vefT~~c~~lGW 160 (363)
T d1m7va_ 81 RDVRTKEDVRDALFHHIETATNNGKIRPSITIFPPEEKGEKQVEIWNHQLIRYAGYESDGERIGDPASRSLTAACEQLGW 160 (363)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHGGGSCCCEEEECCCCSSSCCSEEECCSBSSCBCEEC--CCCEECGGGHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 68999899999999999997079987623898078778999865644888866175889983689526899999997599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~t~FDvLPlviq~~g~~~P~~feiP~~lvlEV~i~HP~~~~f~~LgLkWyavP~iS~M~L~iGGi~y~aaPFNGWYM 240 (363)
T d1m7va_ 161 RGERTDFDLLPLIFRMRGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYM 240 (363)
T ss_dssp CCCCCTTCBCCEEEEETTCSSCEEECCCTTTCCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEECCCHHHEEEECCCCCCCHHHHHCCCCEEECHHHCCCHHHCCCEEECCCCCCCCEE
T ss_conf 99899888403899967999981331887783675157989755776698632032332240310888542456343422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~TEIgaRnl~D~~RYn~L~~VA~~mGlDt~~~~sLWkDrAlvElN~AVLhSF~~~gVtivDHHtas~~F~~f~~~E~~~~ 320 (363)
T d1m7va_ 241 GTEIGARNLADEKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKRFEEQEEEAG 320 (363)
T ss_dssp HHHHHTTTTTCTTTTCCHHHHHHHTTCCCSCGGGTHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHHHHHHHHHHHHHTT
T ss_pred EHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHC
T ss_conf 00230244555777774799999948888997215778899999999999999879647052788999999999999818
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
.
T Consensus 321 r~~~gdW~WlvPP~S~s~tpvfH~~~~~~~~~Pnf~yq~~pw~ 363 (363)
T d1m7va_ 321 RKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDKPYE 363 (363)
T ss_dssp CCCBCCHHHHSCSSSGGGSGGGGSCCBCCCCSSEEECCCCTTC
T ss_pred CCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9999984377788864344277776544445887502788899
|
| >d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
Probab=100.00 E-value=0 Score=27339.41 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGilAADeS~gT~~Krl~~igventeenr~~yR~~lftsp~f~~~~IsGvILfe 80 (363)
T d1zaia1 1 PHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFH 80 (363)
T ss_dssp CCCCCSSCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999980589869982689983777898769999778999999987148512205446897648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLd~L~~rl~~y~~~Ga~faKwRsVi~i~~~~ps~ 160 (363)
T d1zaia1 81 ETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSA 160 (363)
T ss_dssp HHHTCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCSSSCSCH
T ss_pred HHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
T ss_conf 87511225998622566515854467347653336788644135662239999999986686513112102235677740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~v~~~l~~~~V~leg~lLKpnMv~~g~~~~ 240 (363)
T d1zaia1 161 LAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACT 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 24899899999999999865842002353442476315788999999999999876412323467501355666754355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamNk~~~~~pW~lsfSfgRALQ~~~lk~W~g~~~n~ 320 (363)
T d1zaia1 241 QKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENL 320 (363)
T ss_dssp SCCCHHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESHHHHHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCH
T ss_conf 54886675566555654058977772110578765889999999986036899976999751766489999847882258
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
-
T Consensus 321 ~aaQ~~~~~ra~~Ns~A~~G~y~~~~e~~~~~~~~l~v~~~~y 363 (363)
T d1zaia1 321 KAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCSSSCCCCCCCCCCSCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999985468765850787776754455520067659
|
| >d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PEP carboxykinase-like superfamily: PEP carboxykinase-like family: PEP carboxykinase C-terminal domain domain: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27336.86 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 WLAEHMlIlgvt~P~g~~~yvaaAFPSaCGKTnlAMl~p~~pGwkv~~vGDDiawi~~~~dG~l~AiNPE~G~FGVapgt 80 (363)
T d1khba1 1 WLAEHMLVLGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGT 80 (363)
T ss_dssp CEEESCEEEEEECTTSCEEEEEEECCTTSCHHHHHTCCCCSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTC
T ss_pred CHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 92352343032489997799987567443421088718899996778941746777787889678536655753447898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~tnp~am~~l~~~~IFTNValt~DG~vwWeG~~~~~~~~~~~~~w~g~~~~~~~~~paaHpNsRFt~p~~qcp~id~~ 160 (363)
T d1khba1 81 SVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAA 160 (363)
T ss_dssp CTTTCHHHHHHTTBSCEEESCEEETTSCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTT
T ss_pred CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98889999997536852443567789974678898889877524678899888888997778875202137669866843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 wedP~GVpIsaiiFGGRr~~t~PlV~ea~~W~hGV~~GAtm~SE~TAAa~g~~g~vrrdPmAMlpF~gyn~gdY~~hWL~ 240 (363)
T d1khba1 161 WESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLS 240 (363)
T ss_dssp TTCTTCEEEEEEEEECCCSSSCCSEEECSSHHHHHHHHHTCEEEC--------CCEEECGGGCTTTCSSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHCCCCCEECCCHHHHHHCCCCHHHHHHHHHH
T ss_conf 35987514778997565688887248731466607873210104567764146864318066543328898999999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~g~~~~~k~PkIF~VNWFrKd~~GkFLWPGfGeN~RVLkWI~~Rv~G~~~A~eTPIG~vP~~~dLd~~GL~~~~~~el~~ 320 (363)
T d1khba1 241 MAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELFS 320 (363)
T ss_dssp GGGSTTCBCCEEEEECSCCBCTTSCBSSCCGGGGHHHHHHHHHHHTC--CEEEETTEEEECTTCSCCTTCCCCCHHHHTC
T ss_pred HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 51246567984799976534588886578863156999999998649755201676312683446866788666999838
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
=
T Consensus 321 vd~~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~~m 363 (363)
T d1khba1 321 ISKEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRISQM 363 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 7999999999999999998733305099999999999999649
|
| >d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glutaminase/Asparaginase superfamily: Glutaminase/Asparaginase family: Glutaminase/Asparaginase domain: Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27335.78 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~lPkI~ii~TGGTIa~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~~~~~~dS~~~~~~~~~ 80 (363)
T d1zq1a2 1 KPEVHFEALIEGKPGLPEVTIIGTGGTIASRIDYETGAVYPAFTAEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWV 80 (363)
T ss_dssp CCCCCCCSSCCCCTTCCEEEEEECSCCCCEEEETTTTEEEECCCHHHHHHHCGGGGGTSEEEEEECCCCCGGGCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCEEEEEEECCCCCHHCCHHHHH
T ss_conf 98644345688999999799997787314046687783378799999998575455125267999633896247999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~~~~kPVVlTGa~~P~~~~~sDg~~NL~~Al~~A~~~~~~v~v 160 (363)
T d1zq1a2 81 KIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATSEVAEVMV 160 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTSSBCSEEE
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999998632777737983587739999999999724899638996334135677751077899999998565666326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~i~~a~~v~K~~t~~~~aF~sp~~~pLg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pG 240 (363)
T d1zq1a2 161 VMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPG 240 (363)
T ss_dssp EEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECTTSCEEESCSCCCBCCCCCCEECCCCCCCEEEEECCTT
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 75200143145532131012345655444468776744899738879862454468887534554245785799993699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~l~~~~~~g~~GiVl~g~G~Gnvp~~~~~~l~~a~~~gi~VV~~Sqc~~G~v~~~~Y~~g~~l~~~GvI~~gdlt~ 320 (363)
T d1zq1a2 241 ISSEIIDFLVDKGYKGIVIEGTGLGHTPNDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLP 320 (363)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTBCCGGGHHHHHHHHHTTCEEEEEESSSBSCCCCSSSHHHHHHHHTTCEECTTCCH
T ss_pred CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEECCCCCH
T ss_conf 99999999985798369998555888856788999999747926999368787885777654437788699898899899
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
.
T Consensus 321 ekArikLm~lL~~~~~~~eI~~~f~~nl~GE~t~~~~~~~~~~ 363 (363)
T d1zq1a2 321 ETAYVKLMWVLGHTQNLEEVRKMMLTNYAGEITPYTRFDTYLR 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHSCSSTTSCSSCBTTCSCC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999859999999999971366853688766666569
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27334.20 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (363)
T d2c5aa1 1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 80 (363)
T ss_dssp CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHCC
T ss_conf 92231356737878987999788878999999999978298999968985211342356727993515589899876148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~ 160 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 160 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76731023322222222222222222221246777767751752202446654235554456554554346677689888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 161 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 78999999999999999984997899982157616876432222221100000113345543438998578874002778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~t 320 (363)
T d2c5aa1 241 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 320 (363)
T ss_dssp HHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999985788882797168765389999999998689875476899998641455889999986999788999999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
.
T Consensus 321 i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
T d2c5aa1 321 YFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 363 (363)
T ss_dssp HHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 9999998876541454432145331110105312476233789
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=0 Score=27333.61 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 p~~~~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G 80 (363)
T d1onha_ 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARG 80 (363)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC
T ss_conf 98979999999999999998389986999999999999995876006779889999978720559999999999998669
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~llg~i 160 (363)
T d1onha_ 81 EISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIGLFGAL 160 (363)
T ss_dssp SCCTTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHH
T ss_conf 62242021011100244434555065676530467544586455788999999987554148740231256410013555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ie~~tg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~~~~~~l 240 (363)
T d1onha_ 161 AVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAEEAHYAWGYRDGKAVRAVRVSPGMLDAQAYGVKTNVQDMANWVMANM 240 (363)
T ss_dssp HTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCCSSTTHHHHHCCEECHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 56404997004457888861696421446870014652136665974541011024445656614417999999999860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~G~ 320 (363)
T d1onha_ 241 APENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEANTVVEGSDSKVALAPLPVAEVNPPAPPVKASWVHKTGS 320 (363)
T ss_dssp CGGGCCSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCHHHHHHHHSHHHHTSCEECEEEEEEECCCSSEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 68877716788888775321045787566655020366655554445777542113444445677777778747972365
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
.
T Consensus 321 ~~G~~s~~~~~P~~~~~ivvl~N~~~~~~~~~~~a~~i~~al~ 363 (363)
T d1onha_ 321 TGGFGSYVAFIPEKQIGIVMLANTSYPNPARVEAAYHILEALQ 363 (363)
T ss_dssp CSSCEEEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7875299999977997999997489998899999999999639
|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Hypothetical protein YteR domain: Hypothetical protein YteR species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27333.10 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~a~~~~~~~~~~~~~p~~~W~W~~G~~~~gl~~lye~Tgd~~y~~~a~~~~~~~~~~~g~~~~~~~~~d~~ 80 (363)
T d1nc5a_ 1 KSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAI 80 (363)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTSSSTTCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGT
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 97579999999999973665348999982775649999999999883999999999999999844478745778987415
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~l~~ly~~Tgd~~y~~~a~~~~~~l~~~~~~~~g~~~~~~~~~~~~wiD~l~M~~p~l~~~~~~tgd~~y~d~a~~ 160 (363)
T d1nc5a_ 81 QAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 160 (363)
T ss_dssp GGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 88999999998728688999999999862137878878631367887773642067748999999998698789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~l~d~~~gL~~h~~~~~~~~~~~~~~~~~~~~~WsRGngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~ 240 (363)
T d1nc5a_ 161 QESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSI 240 (363)
T ss_dssp HHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999997515889986525455676677788888786501100019999879999867777800999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~q~~d~G~w~~~~d~p~~~~~~~etSata~~~y~l~~g~~~g~l~~~y~~~~~ka~~~l~~~~~~~~~~g~~~v~~~~ 320 (363)
T d1nc5a_ 241 CRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDIC 320 (363)
T ss_dssp HTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 84558878662310567777898633589999999999998758444999999999999999987403899874650357
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
.
T Consensus 321 ~g~~~~~~~~y~~~~~~~~~~~G~g~fllA~~e~~~l~~~~~~ 363 (363)
T d1nc5a_ 321 VGTSAGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK 363 (363)
T ss_dssp CSCCSCCHHHHHTSCEESSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899998200126787578757799999999999999984289
|
| >d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Pentaerythritol tetranirate reductase species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=27332.58 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~e~LF~P~~ig~~~lkNRiv~apm~~~~a~~~g~~~~~~~~~yy~~ra~~Glii~e~~~V~~~~~~~~~~~~l~~d~~i~ 80 (363)
T d1vyra_ 1 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIA 80 (363)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHH
T ss_pred CCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCC
T ss_conf 95047983689989788738763468767798998989999999997086979981268885335799987437735503
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~ 160 (363)
T d1vyra_ 81 AWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVN 160 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 20033445652697046644126765454436787630101223555555344766664557877764566777999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~f~~AA~rA~~aGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~~g~d~i~~r~s~~~~~~ 240 (363)
T d1vyra_ 161 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 240 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
T ss_conf 99999999997513403451467103111446766566654464033444767888765553047887412311323311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~gg~~~~e~~~~~~~l~~~gvd~i~vs~~~~~~~~~~~~~~~~~~~~~~~~~vi~~G~~t~~~ae~~l~~G~~DlV~ 320 (363)
T d1vyra_ 241 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVA 320 (363)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCEEH
T ss_conf 10001330688999999877429806620347766786532888999898658539966899999999999879965115
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
-
T Consensus 321 ~gR~liadP~~~~K~~~g~~~~~~~~~~~~~~~~~~y~~y~~~ 363 (363)
T d1vyra_ 321 FGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL 363 (363)
T ss_dssp ESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCSCCC
T ss_pred HHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 5499987921999998389999998754237999985789898
|
| >d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27332.04 Aligned_cols=1 Identities=0% Similarity=0.503 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 M~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~e~i~~~dail~Gaig~P~ 80 (363)
T d1cnza_ 1 MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPK 80 (363)
T ss_dssp CCCCEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCC
T ss_conf 99986699989888559999999999999866619706999996428799974996889999999850413772257878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~~g~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~~~~~ 160 (363)
T d1cnza_ 81 WENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK 160 (363)
T ss_dssp GTTSCGGGSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECCGGGCE
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEE
T ss_conf 65543456644006799999738825777776125655323576554679842899874135433576531316885203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~t~~~~~ri~r~Af~~A~~r~~kVt~v~KaNv~k~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (363)
T d1cnza_ 161 AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQF 240 (363)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred ECCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCC
T ss_conf 32237764899999999999999966995689813753304487899999986228874975176658999986455777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~~lg~~~~A~ 320 (363)
T d1cnza_ 241 DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAAT 320 (363)
T ss_dssp SEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 66642357777678899887504542111034036407851677765334798864909999999999984189879999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
-
T Consensus 321 ~i~~Av~~~l~~g~~T~Dl~~~~~~~~T~e~~dai~~~l~~~~ 363 (363)
T d1cnza_ 321 AIEQAINRALEEGVRTGDLARGAAAVSTDEMGDIIARYVAEGV 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCGGGTTTTTCCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999769967564689974899999999999987019
|
| >d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: CelA cellulase species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=0 Score=27329.01 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~qa~~~~~~~~~w~~~k~~~~~~~~~~~~~rv~d~~~~~~~t~SEGQgYGMl~Av~~~d~~~ 80 (363)
T d1kwfa_ 1 AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSQGMGYGLLLAVCFNEQAL 80 (363)
T ss_dssp CCSSCCCCCSSSCSCSSSCHHHHHHHHHHHHHHHHHHHEECTTSTTSCEECCCGGGTTCEEHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
T ss_conf 99887788888766778757899999999999999998066798872488717988987312789999999998499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Fd~l~~wt~~~l~~~~L~aW~~~~~~~~~~~~~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~Y~~~A~~ii~~i~~~~v 160 (363)
T d1kwfa_ 81 FDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCV 160 (363)
T ss_dssp HHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999974566888536778999877677888989768999999999999774874088999999999999998510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~v~~~s~~ll~~~~~~~~~tGL~pDw~~~~~~p~~~~~ 240 (363)
T d1kwfa_ 161 EHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQS 240 (363)
T ss_dssp CTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTTTSTTSCCCCSSBCTTSSCCTTSC
T ss_pred CCCCCEECCCCCCCCCCEECHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78984553676568988558032359999999963687338999999999999976405888888400046888588898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~ydA~Rvp~~ia~d~~~~g~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~G~~~~~~~~~~f~A~~~~~~~~~~~~~~ 320 (363)
T d1kwfa_ 241 YDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNF 320 (363)
T ss_dssp CSBSTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCGGGCCSCBCTTSCBCCCCCCTTTHHHHHHHHTTSSCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 87565599999999998750157145899999999998459888750481698446888979899999999873588589
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~~sG~~~~p~~~~ 363 (363)
T d1kwfa_ 321 AKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL 363 (363)
T ss_dssp HHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999987522467777887899999999999749989887679
|
| >d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes family: D-aminoacid aminotransferase-like PLP-dependent enzymes domain: Branched-chain aminoacid aminotransferase species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=0 Score=27328.11 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~ 80 (363)
T d2a1ha1 1 SSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80 (363)
T ss_dssp CCCCGGGCEECCCSSCCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCEEEECCCCEECCCHHHCCCCCEEEEEEEEEE
T ss_conf 97542115999767998898972237777755651799992288300887868412610720111304424353689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~g~i~lFrld~Hl~RL~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~ 160 (363)
T d2a1ha1 81 GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRAL 160 (363)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEE
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 79997899735788777888889757999876899999999998777526654465379997622677644566776662
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~dg~v~E~~~sN 240 (363)
T d2a1ha1 161 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMN 240 (363)
T ss_dssp EEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEE
T ss_conf 14897603456750013644689751011467545534214556422226888761489501100013451489616607
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 iF~v~~~kdG~~~l~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~ 320 (363)
T d2a1ha1 241 IFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320 (363)
T ss_dssp EEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEE
T ss_conf 99998358885799723654334674489999999997399820664779999996765599618998478858999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------6
Q 001706 633 ------------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------------~ 633 (1024)
-
T Consensus 321 I~~~~~~~~i~~g~~g~~it~~L~~~l~~iq~G~~~~~W~~~v 363 (363)
T d2a1ha1 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV 363 (363)
T ss_dssp EEETTEEEECTTGGGTTHHHHHHHHHHHHHHTTSSCCTTEEEC
T ss_pred EEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 9867964893899808899999999999976788899973579
|
| >d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Sulfolobus fructose-1,6-bisphosphatase-like superfamily: Sulfolobus fructose-1,6-bisphosphatase-like family: Sulfolobus fructose-1,6-bisphosphatase-like domain: ST0318 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27267.59 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~TvSvIKADVGg~~GHt~~hp~ll~~a~~~l~~a~~~glliD~~v~~~GDDi~limTH~~G~d~~eiH~lAW~aF~~~t 80 (362)
T d1umga_ 1 KTTISVIKADIGSLAGHHIVHPDTMAAANKVLASAKEQGIILDYYITHVGDDLQLIMTHTRGELDTKVHETAWNAFKEAA 80 (362)
T ss_dssp CEEEEEEEECCCBBTTTTBCCHHHHHHHHHHHHHHHHTTSCSEEEEEEETTEEEEEEEESSCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 94699997236787777768989999999999861138868877667643742578754689894899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~vAK~l~LYGAGQDLL~DaFSGNvkGmGPgvAEmEf~ERpsEp~~vF~aDKTePGAfNlPlY~~FaDPfnt~GLvidp~m 160 (362)
T d1umga_ 81 KVAKDLGLYAAGQDLLSDSFSGNVRGLGPGVAEMEIEERASEPIAIFMADKTEPGAYNLPLYKMFADPFNTPGLVIDPTM 160 (362)
T ss_dssp HHHHHTTCBTTTTTTCTTSSSSSCCCCCCEEEEEEECCCSSCEEEEEEEESBCGGGGHHHHHHHHHCTTTCTHHHHCGGG
T ss_pred HHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCC
T ss_conf 99887256556621211346765257787437887225789857999853888760120689984284578750317101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 h~Gf~FeV~Dv~~~k~i~l~~Pee~Ydllalig~~~RyvI~~V~~k~~~eiaav~St~RL~~iAG~YvGKDDPV~iVR~Q 240 (362)
T d1umga_ 161 HGGFKFEVLDVYQGEAVMLSAPQEIYDLLALIGTPARYVIRRVYRNEDNLLAAVVSIERLNLIAGKYVGKDDPVMIVRLQ 240 (362)
T ss_dssp TTCEEEEEEETTTTEEEEEETTTTHHHHHHHHTSTTTEEEEEEEETTTCCEEEEECCCCCBCC---CBCCCSCEEEEECS
T ss_pred CCCEEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCEECCCCCCEEEEEEC
T ss_conf 36705899970257178851806877899983898735899998668997789976678776406120688866999846
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~gfPA~gEvlepFa~phlVaGwmRGSH~gPlMPV~~~da~~trFdgpPrV~alGFql~~GkL~GP~DlFddpafD~~R~~ 320 (362)
T d1umga_ 241 HGLPALGEALEAFAFPHLVPGWMRGSHYGPLMPVSQRDAKATRFDGPPRLLGLGFNVKNGRLVGPTDLFDDPAFDETRRL 320 (362)
T ss_dssp SSSCCHHHHHHTTSSCCEEEETGGGCEEEECEEECSTTCSCCGGGCSCEEEEEEEEEETTEEEEEEESSCSGGGHHHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCCHHHHHHH
T ss_conf 88996465542244652114434566678743201456887567899768888888627887376324577430689999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 a~~~A~~mR~~Gpf~PhrLp~~emEYttlp~vl~kL~~rf~~ 362 (362)
T d1umga_ 321 ANIVADYMRRHGPFMPHRLEPTEMEYTTLPLILEKLKDRFKK 362 (362)
T ss_dssp HHHHHHHHHTTTTCTTTBCCGGGCSSCCHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 999999998549987655897880211388999999887519
|
| >d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Release factor superfamily: Release factor family: Release factor domain: Polypeptide chain release factor 2 (RF2) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27263.75 Aligned_cols=1 Identities=100% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~eL 80 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGL 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91689999999999999997769798999999999986397144499999999999999999999999999999988877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Ela~ee~deel~~e~~~~l~~l~~~l~~le~~ll~~~~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~r~ae~~gwk~ 160 (362)
T d1gqea_ 81 LELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKT 160 (362)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 87764110588888899999998622467787521367545454379998257606688999999999999999759858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 eiid~~~~e~gG~K~v~~~I~G~~ayg~Lk~EsGvHRvqRvp~~es~gr~hTS~a~V~v~P~~~~~~~~~i~~~dl~i~~ 240 (362)
T d1gqea_ 161 EIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 240 (362)
T ss_dssp EEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEE
T ss_pred EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEECCHHHEEEEE
T ss_conf 99414567766546999999776688999872375048884046777347998778899624787631111767827997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~rs~g~GGQ~vN~t~savri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~i 320 (362)
T d1gqea_ 241 YRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWGSQI 320 (362)
T ss_dssp ECCCCSSCCSTTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCCSCSEE
T ss_pred EECCCCCCCCHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 52699886512033141688744733677764221014789999999999999999999999999887423127576984
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
=
T Consensus 321 RtY~~~~~rv~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 362 (362)
T d1gqea_ 321 RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 362 (362)
T ss_dssp EEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
T ss_conf 676589981500053972578468758877999999987779
|
| >d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27260.85 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~r~l~~~g~~~~~~~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al~ 80 (362)
T d1umda_ 1 HRFETFTEEPIRLIGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIR 80 (362)
T ss_dssp CCCCSSCSSCBCCBCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCC
T ss_conf 99877886764777899989987899979999999999999999999999999977996022278978999999999758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~D~~~~~yR~h~~~la~G~~~~~~~ae~~gk~~g~~~Grggs~H~~~~~~~~~~~~~ivg~~~p~a~G~A~a~k~~~~ 160 (362)
T d1umda_ 81 PGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRT 160 (362)
T ss_dssp TTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 78786873134189999987439999999845568986543542124212367444444223230077777876530344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~~~vDGnDv~~v~~ 240 (362)
T d1umda_ 161 GQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYY 240 (362)
T ss_dssp CCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHH
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHH
T ss_conf 42356522688656773499997764336870366520366644321011145344422232100026744505889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~~~DPi~~~~~~L~~~g~~se~e~~~i~~ei~~~ 320 (362)
T d1umda_ 241 VVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAE 320 (362)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999985689789971334335787655202220014667773299899999999987999999999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
=
T Consensus 321 V~~a~~~A~~~p~P~~~~l~~~VY~~~~~~l~~q~~~~~~~~ 362 (362)
T d1umda_ 321 LERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 362 (362)
T ss_dssp HHHHHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999998679989899971315799963999999999559
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=100.00 E-value=0 Score=27260.11 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~ 80 (362)
T d2pl5a1 1 GSIGIIETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKS 80 (362)
T ss_dssp CCCCBCCCEEEEESCEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSS
T ss_pred CCCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 97673666688518756689887689569999630338889988998788776321155677667883358884599976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~ 160 (362)
T d2pl5a1 81 FDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSI 160 (362)
T ss_dssp EETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
T ss_conf 47553579962335676666675420012345557677520168899999999997186726777403577889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~ 240 (362)
T d2pl5a1 161 AYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPR 240 (362)
T ss_dssp HSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCS
T ss_pred HCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 48367664001346533677799999999999844974236875667836799999999999870926666563333444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~ 320 (362)
T d2pl5a1 241 GNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVK 320 (362)
T ss_dssp SCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 55442067799999998988874078778999986311146333225999996189988999857552759999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
+
T Consensus 321 ~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~p~ 362 (362)
T d2pl5a1 321 SLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENPN 362 (362)
T ss_dssp HHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCCC
T ss_pred HHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCCC
T ss_conf 997579976999948999742105488999999999973999
|
| >d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Tritrichomonas foetus [TaxId: 5724]
Probab=100.00 E-value=0 Score=27258.16 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~e~~ltFdDVlLvP~~Sti~s~r~dVdl~~~l~~~~~~~~~~i~l~iPIIsAnMDTVt~~~mA~~la~~Gglgvih 80 (362)
T d1pvna1 1 AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIF 80 (362)
T ss_dssp CEECSSCBCCGGGEEECCCCBCTTCCGGGCBCCEECSCEETTSCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 95456788785566983798767777101360268774024556663569847846888768999999999888977995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 R~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ag~d~i~IDvAhG~~~~v~~~i~~ir~~~~~~~~IiAGNV 160 (362)
T d1pvna1 81 GSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNI 160 (362)
T ss_dssp CSSCHHHHHHHHHHHHTCCCCCEEEECSSSHHHHHHHHHHHTCSEEEECCSCCCBHHHHHHHHHHHHHHGGGSCEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 05999999998642332023221211013567777777641854775300001015788999999886533103421244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 aT~e~~~~L~~aGaD~vkVGIG~Gs~CTTr~~tGvG~Pq~sAv~e~a~~~~~~~~~~~~~v~iiaDGGi~~~gdi~KAla 240 (362)
T d1pvna1 161 VDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA 240 (362)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHTCBCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEE
T ss_conf 67889999997297579844303434343655503771677999999999875332036875353323474662357888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~GAd~VM~G~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~l~g 320 (362)
T d1pvna1 241 MGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLN 320 (362)
T ss_dssp TTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSTTTCCGGGGCSSSCSSCSSCCBCEEEEECCBCHHHHHHHHHH
T ss_pred EECCCEEEHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 71340021115405565577310103513666622531213322212446521036899737996268777889999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 glrs~~~y~G~~~l~~~~~~~~f~~~t~~~~~E~~~H~~~~~ 362 (362)
T d1pvna1 321 KVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAHDVIVK 362 (362)
T ss_dssp HHHHHHHHTTCSBHHHHHHHCEEEEBCHHHHHHHSCCSSEEC
T ss_pred HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEC
T ss_conf 999987532767599997488999988210211568826739
|
| >d3thia_ c.94.1.1 (A:) Thiaminase I {Paenibacillus thiaminolyticus [TaxId: 49283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Thiaminase I species: Paenibacillus thiaminolyticus [TaxId: 49283]
Probab=100.00 E-value=0 Score=27258.05 Aligned_cols=1 Identities=100% Similarity=1.467 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~tl~~~~~~~~p~~~~~~~~~~~~F~~~~P~V~v~~~~~~~~~~~~~~~pDv~~~~~~~~~~~~~~g~l~~L~~~~~~~~ 80 (362)
T d3thia_ 1 ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQA 80 (362)
T ss_dssp CEEEEECCSCSSCHHHHHHHHHHHHHHHCTTSEEEECCCCTTTCCCCTTCCEEEEEGGGHHHHHHTTCEECBCGGGCTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf 98999966788867999999999999988193899996652544489989699989088999998898233871011110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~dG~~y~vP~~~~~~~~~ynkd~~~~aG~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (362)
T d3thia_ 81 EDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASM 160 (362)
T ss_dssp GGBCHHHHHHTEETTEECCEEEEEECEEEEEETTCHHHHTCCBHHHHHHHHCCCCCCCSSCCEEEEEEECCCSHHHHHHH
T ss_pred CHHHHHHHHCEEECCEEEEEEEECCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
T ss_conf 01113344311569979997651210799961468997389999973789999999751257887246305877526889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~ 240 (362)
T d3thia_ 161 YLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGD 240 (362)
T ss_dssp HHHHHHHHHTCCCCCSSCCCSSSCCHHHHHHHHHHHHHHCHHHHHCCCTTCCTTHHHHHHHHTBEEEEEEETTHHHHHGG
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHHHHHHHH
T ss_conf 99999861885113677633443679999999999997304775334466770122111005818999916587655543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~P~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~fl~s~e~~~~~~~~~g~~~~~~~~~pa~~~~~e~~~~ 320 (362)
T d3thia_ 241 YAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQ 320 (362)
T ss_dssp GGGTEEEECCBSCSSCCCCEEEEEEEEEETTCSCHHHHHHHHHHHHSHHHHHHHHSCCSTTCCCCCCEESBHHHHHHHTT
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 06766546415787789875450231101676479999999999719999999998468876742445057999863310
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~e~lg 362 (362)
T d3thia_ 321 DYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG 362 (362)
T ss_dssp TCTHHHHHHHHHTCTTCEECCCCTTHHHHHHHHTTTHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 398699999999987688761799999999999999998609
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27257.71 Aligned_cols=1 Identities=100% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~i~~~~~~~~~~g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 1 SDLNNAIQGILDDHVARGVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp CHHHHHHHHHHHHHHTTTCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95789999999999775997289999999999999857882056698799998697115689999999999997699877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 dd~v~~ylp~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~llg~ii 160 (362)
T d2drwa1 81 DEPITRWFPDLPKAAQMPVRILLNHRSGLPDFETSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYVLAGMII 160 (362)
T ss_dssp TSBGGGTCTTSTTGGGCBGGGGTTTCSCCCCCTTTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCHH
T ss_conf 76664420354434332335555326899764332223332321026777766406766532201102454311043022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 e~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d2drwa1 161 AHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTEWFPLSGANA 240 (362)
T ss_dssp HHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTCCCCBTTEEECTTTSCHHHHGG
T ss_pred HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32057526666678888502876523357311454533310211556555643233345676566334621134445566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 aGgl~sta~Dla~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~~~yG~G~~~~~~~~~~~~gH~G~~~G~~s~~~~~ 320 (362)
T d2drwa1 241 AGDMVSTPRDIVKFLNALFDGRILDQKRLWEMKDNIKPAFFPGSNTVANGHGLLLMRYGSSELKGHLGQIPGHTSIMGRD 320 (362)
T ss_dssp GTCEEECHHHHHHHHHHHHTTSSSCHHHHHHHHTSCEECCCTTSCEEEECSSCEEEEETTEEEEEEEEEETTEEEEEEEC
T ss_pred CCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEE
T ss_conf 57527189999999999847997899999999974256535799888704369998459941898246578823999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
|
T Consensus 321 p~~~~~iv~l~N~~~~~~~~~~~~~~~~~~~~il~ai~~~~~ 362 (362)
T d2drwa1 321 EETGAALMLIQNSGAGDFESFYLKGVNEPVDRVLEAIKNSRS 362 (362)
T ss_dssp TTTCCEEEEEESEECSSTTSHHHHTTHHHHHHHHHHHHHHTC
T ss_pred ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 879989999994999556899999999999999999975649
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Probab=100.00 E-value=0 Score=27257.31 Aligned_cols=1 Identities=100% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (362)
T d1v8ka_ 1 PNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQ 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHTCCTTTTTCTTSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCE
T ss_conf 96689999999986413489877888888888999980899968863799469998899189981886444655676860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~f~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~ 160 (362)
T d1v8ka_ 81 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ 160 (362)
T ss_dssp EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHC
T ss_conf 67678661999998999999999999998741681388632578888603330577876555687133115567777630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~S 240 (362)
T d1v8ka_ 161 PRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNS 240 (362)
T ss_dssp HHHHTTCCEEEEEEEEEETTEEEETTTTTEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CC
T ss_pred CCCCCCCHHHEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 12346323311021463277487634577544322124577465898899946889989987414545430245674567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 SRSH~i~~i~i~~~~~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~l 320 (362)
T d1v8ka_ 241 SRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQV 320 (362)
T ss_dssp CSSEEEEEEEEESSSSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 51005799999855600136765202566554444453156553332211107789999999856999688746888886
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
+
T Consensus 321 LkdsllGgns~t~~i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 321 LRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp TTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 133047998619999996987010899999999999974379
|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: Papillomavirus large T antigen helicase domain species: Simian virus 40 [TaxId: 10633]
Probab=100.00 E-value=0 Score=27256.95 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~q~~~~~l~e~a~~~~~~d~~lll~~y~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~nA~~fl~~~~Q~k~~k~~~~~v~ 80 (362)
T d1svma_ 1 KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL 80 (362)
T ss_dssp CCCCHHHHHHHHHHTTCCCHHHHHHHHHGGGSCSTTCHHHHTTCCHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97428888988987589739999999998712518889999877789999999860669999873106899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~kr~~~~~ms~~e~i~~~~~~~~~~~p~~~~~~~~~d~~~~~~il~~l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 160 (362)
T d1svma_ 81 AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK 160 (362)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTSTTCCCCHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 99997312699899999999999853863334544467888999999998644325899999999998289976769998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~~~dg~~ 240 (362)
T d1svma_ 161 GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV 240 (362)
T ss_dssp CSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHHHHHCSS
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCC
T ss_conf 99998889999999998599789997742011888875777799899999876541068997288750731134568860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~p~i~ttN~~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~~~~~~L~~li~~~s~ 320 (362)
T d1svma_ 241 KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV 320 (362)
T ss_dssp CEEECCSSSCCEEECCCCEEEEECSCCCCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTTCHHHHHHHHHHHSCG
T ss_pred HHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCH
T ss_conf 13444210024553167724650654300122466736886268974789999999984035788888999987368987
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 ~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk~ile 362 (362)
T d1svma_ 321 AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGVLD 362 (362)
T ss_dssp GGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999987524149999999999976997779
|
| >d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27255.76 Aligned_cols=1 Identities=0% Similarity=-1.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~e~~~~~~G~~~~~~~G~~lp~et~e~~~~~dail~Gai 80 (362)
T d1vlca_ 1 KIHHHHHHMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSV 80 (362)
T ss_dssp CCCCCCSEEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 97768985799998988667999999999999998762997899998457899997789787899999999789871577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~p~~~~~~~~~~~~~~~~~~lR~~ldlyanvRP~r~~~~~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~ 160 (362)
T d1vlca_ 81 GGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEK 160 (362)
T ss_dssp CCGGGTTSCSTTSHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 79986543213477665578899974433220026753034566666555667772379850124675557777788856
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~t~~~~~Riar~Af~~A~~~~k~Vt~v~K~Nv~~~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (362)
T d1vlca_ 161 GFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQF 240 (362)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCC
T ss_conf 99989943478789999999998618980799943775201589999999999667986999730989999998665777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~~fE~~HGSApdiaGk~iaNP~a~ils~ammL~~~lg~~~~A~~i 320 (362)
T d1vlca_ 241 DVILTTNMFGDILSDESAALPGSLGLLPSASFGDKNLYEPAGGSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKI 320 (362)
T ss_dssp SEEEECHHHHHHHHHHHTTSSSCGGGCEEEEESSSEEEEESSCCCTTTTTTTCSCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 58985306666777899998513332101210422323125686201058986480999999999987346986999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
=
T Consensus 321 ~~Av~~~l~~G~~T~Dlg~~~~~~~~T~e~~dav~~~l~~l~ 362 (362)
T d1vlca_ 321 ERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLEEIW 362 (362)
T ss_dssp HHHHHHHHHTTCCCGGGCSSGGGCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999999998599570004699997769999999999999759
|
| >d1nqka_ c.1.16.4 (A:) Alkanesulfonate monooxygenase SsuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Ssud-like monoxygenases domain: Alkanesulfonate monooxygenase SsuD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27255.65 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~AE~lGfd~~w~~eh~~~~dp~~~la~la~~T~rI~lgt~V~~ 80 (362)
T d1nqka_ 1 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRP 80 (362)
T ss_dssp CCBEEEEECCTTCEESSTTSSTTEECCCHHHHHHHHHHHHHHTCSEEEECCSTTSCCHHHHHHTTSTTCSSCEEEEEECT
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
T ss_conf 92479997456899887888888788999999999999998499999968888888899999999997490699999739
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~P~~~A~~~AtLd~lS~GR~~lGlG~G~~~~e~~~~g~~~~~~~~~~~~~E~~~ilr~l~~~e~v~~~G~~~~~~~~ 160 (362)
T d1nqka_ 81 SVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA 160 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHTCCCCTTHHHHHHHHHHHHHHHHTTTCCEEEECSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 98986999999999999749985268863666888852122220245566678989999875025664554124652587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~p~~~p~ppi~~a~~~p~~~~~Aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d1nqka_ 161 KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW 240 (362)
T ss_dssp CCSSCCSSSSSSCEEEECSSHHHHHHHHHHCSEEEEECCCHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEEEESSHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHH
T ss_conf 54234478997016874265789998874265512458999999999999999999709975242343699944689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~V~e~L~~~~ 320 (362)
T d1nqka_ 241 QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYA 320 (362)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHSCC-----------------CTTEEETTEEGGGGSSSSSCSCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
T ss_conf 98765665430889999986542012100466776530340144433467767777506888708858999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
=
T Consensus 321 ~~G~d~~~l~~~~~~~~l~~f~eeV~P~l~~~~~~~~~~~~~ 362 (362)
T d1nqka_ 321 ALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIPEIPQPQPL 362 (362)
T ss_dssp TTTCCEEEEECSSHHHHHHHHHHHTGGGSCBCCCCCCCCCCC
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 729998999489998999999998999870135067899998
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27255.62 Aligned_cols=1 Identities=0% Similarity=0.403 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 f~~RG~mlD~aR~~~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA 80 (362)
T d2gjxa1 1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA 80 (362)
T ss_dssp CSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98558677638888089999999999998299389999874787600147873144337868878863899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~rgI~vIPEiD~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lF~~~~iHiGgDE~~~ 160 (362)
T d2gjxa1 81 RLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDF 160 (362)
T ss_dssp HHTTCEEEEECCCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCS
T ss_pred HHCCCEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 97598798536665046899874833137665788877755665777377899899999999885146537740540124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~w~~~p~~~~~~~~~g~~~~~~~l~~~f~~~~~~~l~~~gk~~i~W~d~~~~~~~l~~d~ii~~W~~~~~~~~~~~~~~ 240 (362)
T d2gjxa1 161 TCWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELEL 240 (362)
T ss_dssp HHHHHCHHHHHHHHHHTCTTCSHHHHHHHHHHHHHHHHTTTCEEEEEHHHHHTTCCCCTTCEEEECCSSSSSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 43336878899998617788999999999999999999739706744410256777899872564314543668989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~G~~~i~s~~~yl~~~~~g~~w~~~y~~~p~~~~~~~~~~~~ilG~e~~lW~E~i~~~~l~~~~~PRl~A~AE~~Ws 320 (362)
T d2gjxa1 241 VTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWS 320 (362)
T ss_dssp HHHTTCEEEECTTCCTTSCBSSCTHHHHHHCCTTCSSCCHHHHTTEEEEEEEECTTSCSTTTHHHHHTTHHHHHHHHHHS
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 97579859981674256567777656545531036766865650550347770107778510688899799999999859
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~d~~~f~~Rl~~~~~rL~~~Gi~~~p~~~~~c~~~~~~ 362 (362)
T d2gjxa1 321 NKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQ 362 (362)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHTTCCCCCSSSCCCSSCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
T ss_conf 987889999999999999999977998769998645420329
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27255.25 Aligned_cols=1 Identities=0% Similarity=-0.295 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~ 80 (362)
T d1q8ya_ 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 80 (362)
T ss_dssp CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 97888888844785799899750778189999999999799999983431336899999999998401455555422767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~ 160 (362)
T d1q8ya_ 81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 160 (362)
T ss_dssp TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE
T ss_conf 64789987631256520234320003542000001223467868999999999999988876405864656770570563
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 161 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 05765644305675314421234454223665210571321466777643201237899999878899898755432102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 68999999983799878862453220001320122024323577644421000156743589999999998779945790
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
.
T Consensus 321 ta~e~L~Hp~f~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 362 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWFEEVR 362 (362)
T ss_dssp CHHHHHTCGGGTTCTTCTTCCCTTSCTTCBSTTSTTSSSCCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 899996693407898744477998666788899984354409
|
| >d1qjwa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Trichoderma reesei, Cel6a [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Trichoderma reesei, Cel6a [TaxId: 51453]
Probab=100.00 E-value=0 Score=27252.94 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~gNPf~g~~~yvnP~y~a~v~~~a~~~~~~~~~~~~~~ia~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (362)
T d1qjwa_ 1 ATYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQ 80 (362)
T ss_dssp CCCSSCTTTTSEECCCHHHHHHHHHHTGGGCCHHHHHHHHHHTTSCCCEEECSGGGHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 97678998897331473058899998751368788999999846780698237788740689999999998726887228
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 lV~Y~iP~RDC~a~ss~G~~~~~~~g~~~Yk~Yid~Ia~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~~~~~ 160 (362)
T d1qjwa_ 81 FVVFDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQIVVEYSDIRTLLVIEPDSLANLVTNLGTPKCANAQSAYLEC 160 (362)
T ss_dssp EEECCCTTCSTTCSTTCCSCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECSSSHHHHHHCTTSHHHHTTHHHHHHH
T ss_pred EEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99936999971444249986656554688999999999999856897439997776066654057844457789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~yAv~~L~~pnv~vYlDaGhsgWlgw~~n~~~~a~~~a~~l~~ag~~~~~rGFatNVSNy~~~~~~~~~~~t~~n~~~~ 240 (362)
T d1qjwa_ 161 INYAVTQLNLPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYN 240 (362)
T ss_dssp HHHHHHHTCCTTEEEEEECCCTTTTCSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTSCCCSSCSSCCGGGTTCSCCS
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999970899748999788776678743214789999999984667542327898556887766677765445675514
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 e~~Y~~~l~~~l~~~G~~~~~fVIDTsRNG~gp~~~~~~g~WCNp~G~glG~~Pt~~t~~~~vDA~lWIK~PGESDG~~~ 320 (362)
T d1qjwa_ 241 EKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGDSLLDSFVWVKPGGECDGTSD 320 (362)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 89999999999985368899989857888999988767888879999847899988999876016898578826777888
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------6
Q 001706 633 -----------------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~~D~~c~~~~a~~~aP~AG~Wf~~~f~~Lv~nA~P~~~ 362 (362)
T d1qjwa_ 321 SSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANPSFL 362 (362)
T ss_dssp TTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 888777766676567899897777479999999972689779
|
| >d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: E1-beta subunit of pyruvate dehydrogenase (PP module) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27186.08 Aligned_cols=1 Identities=100% Similarity=1.068 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~lske~ll~~yr~M~~~R~~e~~~~~l~~~g~i~g~~h~~~GqEa~~vg~~~~l~ 80 (361)
T d2ozla1 1 FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 80 (361)
T ss_dssp CCSEEEEECCCCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 98876565353302015779988788899999999999999999999999999779875065687877999999998679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~D~~~~~yR~~~~~la~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~~~~~~~~~ivg~~~p~A~G~A~a~k~~~~~~v 160 (361)
T d2ozla1 81 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEV 160 (361)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBTTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCEECCCCCCHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 55785144444210223104610223312687565566554400123466667645445655157899997654058976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~yaist~~~~~~~~~~~~~~~~~~~~~~vdGnD~~av~~a~~~A 240 (361)
T d2ozla1 161 CLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFA 240 (361)
T ss_dssp EEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 99972688766763236555554326765899986786667770110354220001365415996267705799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~R~g~gP~liE~~TyR~~gHs~~D~~~~YR~~~Ei~~~~~k~DPi~~~~~~Li~~g~~se~e~~~i~~ei~~~V~~A 320 (361)
T d2ozla1 241 AAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDA 320 (361)
T ss_dssp HHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99986069888999865568887666652124777888744413899999999999879999999999999999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~A~~sp~P~~~~l~~~VYa~~~p~~~~~~~~~~~~~~~~ 361 (361)
T d2ozla1 321 AQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFKSVS 361 (361)
T ss_dssp HHHHHHSCCCCGGGTTCSSSSSCCCEEEECSBTTCEEEECC
T ss_pred HHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 99998588969899973216899807877689996116789
|
| >d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Deoxyhypusine synthase, DHS domain: Deoxyhypusine synthase, DHS species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27184.38 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~p~~a~~~v~~~s~~~p~~~~~V~g~df~~~~~~~~ll~~~~~~GFqA~~Lg~A~~i~~~Mi~~~~~~~~~~~~~~~~~~ 80 (361)
T d1dhsa_ 1 APAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLT 80 (361)
T ss_dssp CCHHHHHHHSCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC-----------
T ss_pred CCHHHHHCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 95045424341678899999744178778998999999999873930788999999999998752257765422222234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f~~dd~~Lr~~ginRIgd 160 (361)
T d1dhsa_ 81 QSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGN 160 (361)
T ss_dssp ------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTEEEETT
T ss_pred CHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 00125666438986144411465799999999859977898068850399999808641076568848876437651220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 v~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~~Sil~~A~~~~vPVf~Pa~~DssiG~~l~~~ 240 (361)
T d1dhsa_ 161 LLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFH 240 (361)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
T ss_conf 63177999999999999999999985404776464999999974268952499999982997654776516699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~iD~~~D~~~l~~~~~~~~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavqItta~~~dGslSGA~p~EaiSWG 320 (361)
T d1dhsa_ 241 SYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWG 320 (361)
T ss_dssp HHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCTHHHHHHHHHHHTTTSBSEEEEECCCCSTTCCSTTCCHHHHHHHT
T ss_pred HHCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 96189953559999999999987466762699959826378776455317998799970799986766689833013057
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 Ki~~~a~~v~V~~DATIv~PLl~a~~~~k~~~~~~~~~~~~ 361 (361)
T d1dhsa_ 321 KIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHEKNED 361 (361)
T ss_dssp SBCTTCCCEEECSCHHHHHHHHHHHTGGGGHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 61789883799960779999999999975401124322489
|
| >d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=100.00 E-value=0 Score=27182.46 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ 80 (361)
T d2c0ra1 1 SERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF 80 (361)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 99873357988188899999999987632146865434576898999999999999999968999878999788725999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~tg~~~~~~~i~~ 160 (361)
T d2c0ra1 81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKA 160 (361)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEECCEEEE
T ss_conf 99985255689823898404111125555430374012102343333415555542046761489972464125115777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d2c0ra1 161 FPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPP 240 (361)
T ss_dssp CCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30468841899860333320234334325897413345245673799876876627443223324120003331014664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~G 320 (361)
T d2c0ra1 241 SFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred CEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20230115677766502424777789999998756665404654345777431454399997898546999999999788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 I~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~~ 361 (361)
T d2c0ra1 321 FVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG 361 (361)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88736988678698870688999999999999999999659
|
| >d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Xanthan lyase species: Bacillus sp. gl1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=27182.32 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 sdd~~~lr~rw~~~l~g~~~~d~~d~~~~~~l~~l~~~A~~~~~~~~~~~~~~~lW~~l~~~~~~~~l~~~~~rl~~mA~ 80 (361)
T d1x1ia1 1 SDEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMAL 80 (361)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSSGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 91899999999999708876786768999999999999997787458887766767888766630479999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Ay~~pgs~ly~d~~l~~~I~~al~~~~~~~y~~~~~~~~~NWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (361)
T d1x1ia1 81 AATTVGSSLYGNADLKEDILDALDWLYVNSYNSTRSRSAYNWWHWQLGIPMSLNDIAVLLYDDISAARMATYMDTIDYFT 160 (361)
T ss_dssp HHHSTTCTTTTCHHHHHHHHHHHHHHHHHTSSTTSCTTSSSHHHHHTHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 98299985538999999999999999971888888998999125551757999999998514169999999998999857
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 p~~~~TGaN~~d~a~~~~~rglL~~d~~~~~~a~~~i~~~~~~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG~~~l~~~~~ 240 (361)
T d1x1ia1 161 PSIGLTGAARAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTAN 240 (361)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSTTSSSCCSSSSEECTTSCEEETTTEECTTTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCEECCCCEECCCCEECCCCCHHHHHHHHHH
T ss_conf 89886530788789999999998469999999999976401305526888651478634257710167533999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~~~~~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~ 320 (361)
T d1x1ia1 241 LMYLLSGSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFK 320 (361)
T ss_dssp HHHHHTTSTTCCCCGGGGHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHTTTCCTTHHHHHH
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99997799887887899999999996002574377016657764014788654457999999999987229999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~k~~~~~d~~~~~~~~~~~~~~~~~~~ll~d~~i~~~~~ 361 (361)
T d1x1ia1 321 QIAKRVIQEDTFSSFYGDVSTDTIRLAKAIVDDPSIAPAAA 361 (361)
T ss_dssp HHHHHHHHHCCSSCGGGGSCHHHHHHHHHHHTCTTCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999986076654235887889999999856898897879
|
| >d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 2-aminoethylphosphonate transaminase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27181.55 Aligned_cols=1 Identities=0% Similarity=0.270 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~l~~pGP~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~ 80 (361)
T d1m32a_ 1 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVL 80 (361)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 95036999877799999851544698868999999999999999829899988999889789999999998654224653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~ 160 (361)
T d1m32a_ 81 IVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTY 160 (361)
T ss_dssp EEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEE
T ss_pred EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 01101223457777655301233222234678640256899874247662699843002342011234442211452146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (361)
T d1m32a_ 161 IVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 240 (361)
T ss_dssp EEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 75200256745532233445268763034533799866789625554100024566432200111011234566678777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~g 320 (361)
T d1m32a_ 241 THTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
T ss_conf 10446899999999985003566788899887777777622875467856649967999899988779999999999889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 i~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L~~~ 361 (361)
T d1m32a_ 321 FVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 361 (361)
T ss_dssp EECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 28978986889989984788899999999999999975999
|
| >d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Homocysteine S-methyltransferase family: Homocysteine S-methyltransferase domain: Betaine-homocysteine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27179.76 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~llerL~~~~ililDGgmGteL~~rG~~~~~~Ws~~~~l~~Pe~V~~iH~~yi~AGAdiI~TNTy~a~~~~l~~~g~~~ 80 (361)
T d1lt7a_ 1 KGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYV 80 (361)
T ss_dssp CCHHHHHHTTCCEECCTTHHHHHHHHTC-------------CHHHHHHHHHHHHHHTCSEEEEEC---------------
T ss_pred CHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCHHH
T ss_conf 95889862699799978889999977999899988688852959999999999996799998278857879998613266
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~aa~~~a~~~~~~~~~~VaGsigp~~~~~~~~~~~~~~~~~~~q~~~l~~~gvD~il~ETm~~~~Ea~~a 160 (361)
T d1lt7a_ 81 LEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWA 160 (361)
T ss_dssp --------CHHHHHHHHHHHHHTTTCEEEEEECCCHHHHTTCCHHHHHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 78899999999999998510244321010256678631121104788999999899887504322336777568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~a~~~~~~Pv~~s~t~~~~g~l~~g~~~e~~~~~~~~~~~~~g~nc~~~p~~~~~~i~~l~~~~~~~~~~~~~~~~p~~ 240 (361)
T d1lt7a_ 161 VETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 240 (361)
T ss_dssp HHHHGGGSSCEEEEECCBTTBSTTSCCHHHHHHHHHHTTCSEEEEESSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred HHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99986036608898787178863677849999988730620555214554676899999999765541455135404652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~pn~~~~~~~~~p~~~~~~~~~~~~~~~~~~~a~~~~~~Ga~iIGGCCGttP~HI~~la~~l~~~~~~~~p~~~~~~~ 320 (361)
T d1lt7a_ 241 YHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGS 320 (361)
T ss_dssp BCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHTHHHHSSCCC-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 33778776566789887687665647999999999999987990999898798999999999985145899998888877
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 361 (361)
T d1lt7a_ 321 WGSGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPD 361 (361)
T ss_dssp -------------CTTSCHHHHHHCCCCCSCTTSCSCCCCC
T ss_pred CCCCEECCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 36776426875015446599998626678998881024898
|
| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Methionyl-tRNA synthetase (MetRS) species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27177.71 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~v~~~~P~p~G~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~g~~i~~~A~~~g~~~~~~~~~~~~~~~~ 80 (361)
T d1rqga2 1 MVRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKI 80 (361)
T ss_dssp CCEEEEEECCCBTTSCCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 96599944898889873456445629999999999981599267158537650999999998299999999999986000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~~~~~ 160 (361)
T d1rqga2 81 TFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFAICGRPISFRDSAHYYIKMQDF 160 (361)
T ss_dssp HHHHHTCCCSEEEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEBTTTTBCCCGGGTTTCCBCEEEEEEEEEECGGGT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCHH
T ss_conf 00001222233544566002344553443101368533124664100022011033213589954310263478750113
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~d~~isr~~~wg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (361)
T d1rqga2 161 AERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKP 240 (361)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHTTCCCCEECEECCSSSCBCSCCCSSSTTCEECHHHHGGGHHHHHHHHHHHHTTCT
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 54432101335433210345542002023333333346435667654346788278750345546564566676667733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~G~KMSKSlGN~I~~ 320 (361)
T d1rqga2 241 NEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWV 320 (361)
T ss_dssp TTTHHHHBCSSCCEEEEEEEEGGGHHHHHTHHHHHHHTTCCBCSSSCCBCBCCCSBCCEECCEEETTEECBTTTTBSCBH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCH
T ss_conf 57777654016886348734655533100148999998632565542014778978897023975898668779988788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
=
T Consensus 321 ~d~i~~yg~D~lR~~l~~~~p~~~d~dfs~~~~~~~~n~~~ 361 (361)
T d1rqga2 321 HEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEEL 361 (361)
T ss_dssp HHHTTTSCHHHHHHHHHHTCCSSSCEEECHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99998868089999999608888999889999999864589
|
| >d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Modulator in mal gene expression, MalY species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27177.02 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~ 80 (361)
T d1d2fa_ 1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 80 (361)
T ss_dssp CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 92738789799998999999999985788899899898999999999999838999802599908889999987653111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~ 160 (361)
T d1d2fa_ 81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD 160 (361)
T ss_dssp TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 23223233334520368998503437861133332223322211021003677416873044432233320234343200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d1d2fa_ 161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP 240 (361)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 11332200010234332323333456532222233333334454444445420034132267888876510223466510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~ 320 (361)
T d1d2fa_ 241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA 320 (361)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEE
T ss_conf 01247889987503411210133322036778888765310223355567415999983589999999999999869999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr 361 (361)
T d1d2fa_ 321 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 361 (361)
T ss_dssp CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98360018899987999971899999999999999999619
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=0 Score=27176.90 Aligned_cols=1 Identities=0% Similarity=0.901 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 97999888767999999999977997899984798644277787653168847998657898999999975799999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 60166666775999999999999999999999841222101468549999344101177866775434567887566889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECEEHHHHH
T ss_conf 99999899999999999999999968989999138568929985769999999997499817947999689078899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~ 320 (361)
T d1kewa_ 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPL 320 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCC
T ss_conf 99999985698899699899997534777767653001233445676543255689999875531578999998799889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 ~~l~e~i~~ti~w~~~n~~~~~~~k~~~~~~~~~~~y~~~~ 361 (361)
T d1kewa_ 321 ETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGRQ 361 (361)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHSCCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999999999986998887661778999998515699
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=100.00 E-value=0 Score=27174.13 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~q~f~w~~~~~~~~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd 80 (361)
T d1mxga2 1 AKYLELEEGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVE 80 (361)
T ss_dssp CCSSCGGGTCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSS
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 93124455887999452687887855999999789999649998996957407999889998865665567543456778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~Gt~~d~~~LV~~aH~~GikVIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (361)
T d1mxga2 81 TRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFG 160 (361)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSSCSCCSCCCT
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78899999999999999779979998603255577656577666556545665567888766555676666554223456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~giDGfR~Daa~~v~~~f~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (361)
T d1mxga2 161 GFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGA 240 (361)
T ss_dssp TSCBBCTTSHHHHHHHTSSTTSHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHCCCEEECCCCSCHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf 76423677605689999999987655441687604505421199999987775168733256346788998655532688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~R~~~~~~a~a~llt~pGiP~iyYGd~~~~ 320 (361)
T d1mxga2 241 KVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAYAFILTYEGQPVIFYRDFEEW 320 (361)
T ss_dssp EEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSCHHHHHHHHHHSSSEEEEEHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 43041589999999944983789999862521025798781336736678010158999999982899017885897566
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~d~~~f~R~gd~~~ 361 (361)
T d1mxga2 321 LNKDKLINLIWIHDHLAGGSTTIVYYDNDELIFVRNGDSRR 361 (361)
T ss_dssp SCHHHHHHHHHHHHHTCCSCEEEEEECSSEEEEEECCCSSC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf 77079999999999716798478987799899996788889
|
| >d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Erwinia chrysanthemi, type A [TaxId: 556]
Probab=100.00 E-value=0 Score=27172.30 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~s~~~~G~a~~~ggttGG~gg~~g~v~~Vt~l~dL~~al~~~~~p~iI~v~G~I~~~~~~~~~~~~~~~~~ 80 (361)
T d1pe9a_ 1 AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CCCCCTTTTCCCCSSSGGGSSSCCCTTTTCCGGGEEEECSHHHHHHHHTTTTSCEEEEECSEEETTTTCCCCSHHHHHHH
T ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 95212111322477634351799876888848779996999999998747997089998549978887443332220223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~i~v~sn~TI~G~g~~~~i~~~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Dai~i~~~s~~VwIDH~ 160 (361)
T d1pe9a_ 81 SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV 160 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESC
T ss_pred CEEEECCCCEEEEECCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC
T ss_conf 15871898579870688489621699850366426999827865575577765668775667873687517743999852
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 s~s~~~~~~~~~~~~~~~~~~~~Dg~~di~~~s~~vTiS~~~f~~h~~~~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~ 240 (361)
T d1pe9a_ 161 TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE 240 (361)
T ss_dssp EEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEE
T ss_pred EECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 74058766533345567630541025875057431373387546877623735677776555786259997854268757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 R~P~~r~G~~Hv~NNy~~n~~~~~~~~~~y~~~~~~~a~il~E~NyF~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 320 (361)
T d1pe9a_ 241 RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA 320 (361)
T ss_dssp CSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEEESSCCEEEEESCEETTEE
T ss_pred CCCCEECCEEEEECCEEECCCCCCCCCCCEEEECCCCCEEEEECEEEECCCCCCCCCCCEEECCCCCEEECCCEEECCCC
T ss_conf 68873076489989665368676430001565057887799985088899987553220012178877955882520741
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------6
Q 001706 633 ----------------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~~~~~~~py~y~~~~~a~~v~~~V~~~AGaGkl 361 (361)
T d1pe9a_ 321 VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL 361 (361)
T ss_dssp CCCTTSSCBCCCSCCCSCCCCCCCCHHHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 23368765555667875210456257788988744798879
|
| >d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=27109.60 Aligned_cols=1 Identities=0% Similarity=0.969 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 mntfG~~~r~tt~GESHG~~lg~vidG~PaGl~i~~e~I~~~L~RR~pg~~~~t~R~E~D~veilSGv~~G~TtG~PI~~ 80 (360)
T d1sq1a_ 1 MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80 (360)
T ss_dssp CCEECSSSEEEEECCGGGSCEEEEEECCCSSCBCCHHHHHHHHHHTTC-----------CCEEECSSEETTEECSSCEEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCEEEE
T ss_conf 98775523898525578884489993409588609999999996179999889867888717992263689876750078
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~s~v~~IG~~~ 160 (360)
T d1sq1a_ 81 VVFNENAHSKDYDNLKDLFRPAHADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV 160 (360)
T ss_dssp EEC----------------------------------------CCCTHHHHHHHHHHHHHHHHTTTCEEEEEEEEETTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEE
T ss_conf 88716787310466623678750777876553985776887515999999999999999999862100666788996661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gvP~GLG~p~fdkLda~LA~A~mSIpAv 240 (360)
T d1sq1a_ 161 SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEVLYDKLDSKLAHALMGINAV 240 (360)
T ss_dssp CCSCGGGSCHHHHHHSTTCBSCTTTHHHHHHHHHHHHHTTCCCCEEEEEEEESCCBSCSBTTTBCHHHHHHHHHHTSTTE
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHHHHHCCCCC
T ss_conf 47776646877732573347546778999999999854578763189999846997648601365135888777336310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 KGVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~~GGi~GGiSnG~pi~~rva~KP~sSi~k~q~TVd~~~~~~~~~~~gRh 320 (360)
T d1sq1a_ 241 KAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRH 320 (360)
T ss_dssp EEEEETTGGGGGGSCHHHHCCCCSSSSCSCCTTCSEETTEEBSSCEEEEEEECCCC---------------------CCS
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 01530565565420066462222136644456786000235888628999978875567753222178988788557877
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 Dpc~vprA~~V~Eam~a~vlad~~L~~~~~~~~~~~~~~g 360 (360)
T d1sq1a_ 321 DPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG 360 (360)
T ss_dssp CSCTHHHHHHHHHHHHHHHHHHHHHHTGGGSHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 8707165049999999999999999845779999875449
|
| >d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human (Homo sapiens), liver isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Human (Homo sapiens), liver isozyme [TaxId: 9606]
Probab=100.00 E-value=0 Score=27108.85 Aligned_cols=1 Identities=0% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGiLAaDeS~gT~~Krl~~igventeenr~~yR~~l~tt~~~~~~~IsGvILfe 80 (360)
T d1qo5a_ 1 AHRFPALTQEQKKELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFH 80 (360)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHSTTSCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSCGGGGGTEEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999981489879982689983777898769999779999998888518703435656898369
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLdgL~~Rl~~y~~~Ga~faKwRaVi~i~~~~ps~ 160 (360)
T d1qo5a_ 81 ETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSS 160 (360)
T ss_dssp TGGGCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCH
T ss_pred HHHHHHCCCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
T ss_conf 99841423677466899865963578348750007667765335662018899999986474445212200245577745
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~l~~~l~~~~V~LeG~lLKpnMv~pG~~~~ 240 (360)
T d1qo5a_ 161 LAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACT 240 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCBCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999999999999999971976431433245788746889999999999999887652134678742001025511055
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamN~~~~~~pW~lsfSygRALQ~s~Lk~W~g~~~n~ 320 (360)
T d1qo5a_ 241 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANK 320 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCTTCCEEEEBCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESGGGTHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHH
T ss_conf 55787888899887764303667871001688744888999999986157899976899643756189999857881428
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~~aQ~~~~~ra~~Ns~A~~G~y~~~~~~~~~~~~~lfva~ 360 (360)
T d1qo5a_ 321 EATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTAC 360 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCSCCCHHHHSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
T ss_conf 9999999999986068756740788887865443003139
|
| >d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Amidinotransferase domain: L-arginine: glycine amidinotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27106.56 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~vn~~sE~~~Lk~VivGr~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ea~ee~d~l~~~Le~~GV~V~r 80 (360)
T d1jdwa_ 1 CPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRR 80 (360)
T ss_dssp CCCBBCBSSSCEEEEEECBCTTCBCCCCCHHHHTTSCGGGHHHHHHHTTSBSCHHHHHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99722767463739999517767799976221347856665542332146455999999999999999999876967861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~RD~~~~ig~~~i~~~~~~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (360)
T d1jdwa_ 81 PDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELY 160 (360)
T ss_dssp CCCCCTTCEEECSSCEEECCCBCCHHHHEEEEBTEEEECCBSCGGGTTGGGGTHHHHHHHHHTTCEEEECCCCCCCGGGB
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 46233310101000003675545476202663794233333456553524454157887514675304435543345333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~H 240 (360)
T d1jdwa_ 161 NQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMH 240 (360)
T ss_dssp CTTCCCSSHHHHHHHHHHTCCSBCSSSCCBCGGGEEEETTEEEECCCSSCCHHHHHHHHHHHTTTCEEEECCBSSCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCC
T ss_conf 45544544454321112463254055125425420111652120234422135899998644665311102336733327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lD~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~N~LsI~p~~Vi~~~~n~~~~~~L 320 (360)
T d1jdwa_ 241 IDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMF 320 (360)
T ss_dssp STTTEEEEETTEEEECTTSCBTTHHHHHHTTCEEECCCCCCCCTTSCCSSSCGGGGGCCEEEETTEEEEETTCHHHHHHH
T ss_pred CCCEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEEECCCCHHHHHHH
T ss_conf 66226871587189951336355531332585358535223454542153453051589997699999908889999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~Gi~vi~i~~~e~~~~~GG~~CmT~pl~Reg~~e~y~~ 360 (360)
T d1jdwa_ 321 EKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYLD 360 (360)
T ss_dssp HHTTCEEEEECCHHHHTTTCCTTTTEEEEEESCCCCCSCC
T ss_pred HHCCCEEEEECHHHHHCCCCCCEEECCCEEECCCCCCCCC
T ss_conf 9888989992626543159997384725087786554669
|
| >d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27105.89 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a 80 (360)
T d1bjna_ 1 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA 80 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 93774798858899999999998751024686543457678899999999999999996899997799978826888863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~~~i 160 (360)
T d1bjna_ 81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDET 160 (360)
T ss_dssp HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCC
T ss_pred HHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 00102566543330035630344687776417632121012477764035666412577604999655555457652100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1bjna_ 161 PDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPP 240 (360)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred ECCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 01244522565662352424436513305999726665447776267641012211446774112678876532024444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~~~l~~~Gi 320 (360)
T d1bjna_ 241 TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGL 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 30278889999988641068999999999999988755335430125774344523999875885249999999997898
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~~~ 360 (360)
T d1bjna_ 321 HALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG 360 (360)
T ss_dssp ECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 7634877567388983488999999999999999999739
|
| >d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus alcalophilus [TaxId: 1445]
Probab=100.00 E-value=0 Score=27104.96 Aligned_cols=1 Identities=0% Similarity=1.400 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~ 80 (360)
T d1w23a_ 1 VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 98436707988488999999999998753046865434576788999999999999999968999878999478489999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~i~~ 160 (360)
T d1w23a_ 81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQN 160 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEEEE
T ss_conf 99876411467654155324123334788777640201202444453201112200335553213754881665104432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1w23a_ 161 FPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240 (360)
T ss_dssp CCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 21463036986113453432243565542488504434457765046703434313445774200124543100013331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~~~l~~~G 320 (360)
T d1w23a_ 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQG 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20120015778777641004899999999999888887633520036888201640699998599735999999999789
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
-
T Consensus 321 I~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~~ 360 (360)
T d1w23a_ 321 FVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKENA 360 (360)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8665077766717899508999999999999999998559
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=100.00 E-value=0 Score=27103.85 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~~~r~~~l~~~~~~~L~~lGl~~~i~~~~~~~ 80 (360)
T d1pn0a1 1 TKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDM 80 (360)
T ss_dssp CCEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCC
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 99888788989989598999999998705332489868998689998868859998989999999869838999626776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~dg~~s 160 (360)
T d1pn0a1 81 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 160 (360)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCC
T ss_conf 31599722667741112455543333344320253188999999999986165411356732563688638999605776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1pn0a1 161 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMI 240 (360)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCE
T ss_pred CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
T ss_conf 35999998404566542331113787058866327765512456865302368888777631754332001011221110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~al~Da~~La~~l~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 320 (360)
T d1pn0a1 241 VTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRL 320 (360)
T ss_dssp ECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14444646928983675432050457887520889999999888876589738999999999999999999999999998
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~G~~~~y~~ 360 (360)
T d1pn0a1 321 FSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDE 360 (360)
T ss_dssp HHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 7799368888860335587899999865554330766688
|
| >d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: AF1104-like superfamily: AF1104-like family: AF1104-like domain: Hypothetical protein At2g17340 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27103.16 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~v~~pll~~~~~~~y~~~tv~~~~~~~~~~~~~~~~~~Wl~~f~~~i~~~~~~A~s~~~~~da~~Ra~~f~~~y~~~L~ 80 (360)
T d1xfia_ 1 EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILE 80 (360)
T ss_dssp CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97566466774213766887788887555221526677999999977889999985089999889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~vr~aiAGNif 160 (360)
T d1xfia_ 81 DLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIF 160 (360)
T ss_dssp HHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99848765576017889999999999976999800999999999999987999999753016079999999999987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 D~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~rell~~g~~V~ 240 (360)
T d1xfia_ 161 DLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV 240 (360)
T ss_dssp ---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEE
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 30220021444046426999999854589753669999998735775407999358734999887899999965898499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~KGMGr~~~ 320 (360)
T d1xfia_ 241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIE 320 (360)
T ss_dssp EEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHCCCEEEECCCCCHHH
T ss_conf 99888752336249999999998751205765202135189657999887185768999999983699999828751132
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
-
T Consensus 321 tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~ 360 (360)
T d1xfia_ 321 TNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV 360 (360)
T ss_dssp BSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCHHHCCCCEEHHHHHCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 0101322788103334258999999499611279982479
|
| >d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: Patatin domain: Patatin species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
Probab=100.00 E-value=0 Score=27100.50 Aligned_cols=1 Identities=0% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~ 80 (360)
T d1oxwa_ 1 LGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVP 80 (360)
T ss_dssp CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99700899989878999999999999997497234667997142099999963999999999869970318999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~f~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 160 (360)
T d1oxwa_ 81 FYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDIS 160 (360)
T ss_dssp HHHHHHHHHTCCCCCSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHH
T ss_pred HHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99861210100123346764546999999999958701332167532673015888748973644356886322698861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l~~~~~~~~~~~~~~~~~~~~~s~gtg~~~ 240 (360)
T d1oxwa_ 161 YSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTS 240 (360)
T ss_dssp HHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCCGGGEEEEEECCCCBC
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 15513887778779732247787326774033542256726778999987624675322245677663155314666664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~R~~~~~~~~~~~~lDd~s~~~l~~l~~ 320 (360)
T d1oxwa_ 241 EFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQ 320 (360)
T ss_dssp TTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 33333212442001167689999999876559999999999987447988479974886656541146899999999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~~~~ 360 (360)
T d1oxwa_ 321 VGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRANKA 360 (360)
T ss_dssp HHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999996330343066799999999999999998763059
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=27100.27 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 t~YD~IIVGsG~aG~v~A~rLae~g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (360)
T d1kdga1 1 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDI 80 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95778998968899999999801879699998168987666543454422215764246763212211488755478655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~G~~lGGsS~in~~~~~r~~~~D~~~~~gwp~~~~~l~py~~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 160 (360)
T d1kdga1 81 TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQG 160 (360)
T ss_dssp SSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCHHHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCHHCCCCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 43101220111011333112244022100246653333013444333202332110037886344422589999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~G~R~s~~~~yl~~a~~r~nl~i~t~~~V~rI~~d~~ra~GV~~~~~~~~~~~~~ 240 (360)
T d1kdga1 161 YNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFI 240 (360)
T ss_dssp CEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCCEEE
T ss_conf 16787455788544321000120135322322211356664266300104867999997299899999985236762489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~v~a~~eVILsAGai~SP~LLl~SGIGp~~~L~~~gi~p~v~~~l~~~~~~~~~p~g~~~~~~~~~~~v~~~~~~~~g~~ 320 (360)
T d1kdga1 241 PVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVFGTN 320 (360)
T ss_dssp EEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTCBCSCTTTCSBCTTCBBTTCS
T ss_pred EEEECCEEEEECHHHHCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEECCCCEEECCC
T ss_conf 99979999993656747299986589955666775328643445546453133663200017897562777531463368
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~l~~~~a~~~p~~~~~~~~~~~~~~ae~aa~~il~~~~~~ 360 (360)
T d1kdga1 321 NLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 360 (360)
T ss_dssp SEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 8368854036545789977556588999998875204899
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=0 Score=27101.17 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~W~~~w~~~a~~~~~~a~~~~~~g~~~~A~~~~~~A~~~~~~a~~~~~ 80 (360)
T d2jbwa1 1 KPEDEMDNWGRLILDGVSYSDMVGARDRPKEITWFDYWMSLANEYEQEAERKVALGHDLSAGELLMSAALCAQYAQFLWF 80 (360)
T ss_dssp CHHHHHCCHHHHHHHTCCHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 92658888776761797589998630689942799999999999999999999769987899999999999997356557
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~ 160 (360)
T d2jbwa1 81 DERRQKGQARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMA 160 (360)
T ss_dssp STHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 93677899999999999986479873996357677666239993699999529999379876477899999999966998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~ 240 (360)
T d2jbwa1 161 TATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDY 240 (360)
T ss_dssp EEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTT
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHH
T ss_conf 99971642223576555656699999999999996600155553423331050999987515987554999746555777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g 320 (360)
T d2jbwa1 241 WDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDG 320 (360)
T ss_dssp GGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGGGEEEEEETTC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 75433456677777506873577889877406645467527999899972999928999999999657998599997999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
.
T Consensus 321 ~H~~~~~~~~~~~~i~dWl~~~L~~g~~~apt~~~~p~~~ 360 (360)
T d2jbwa1 321 DHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGWPLEH 360 (360)
T ss_dssp CGGGGGGTTHHHHHHHHHHHHHHTSSCCCCCCEESCSCC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9677767579999999999998314897899877788889
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=0 Score=27101.01 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 1 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCCHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 98601005146889999999989969999899994899169998888999899999999992899899999899994887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~ 160 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160 (360)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred EECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCC
T ss_conf 50897127741211454321000111110000012221000000135520230121322566521233121100025654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 240 (360)
T d1k32a3 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 240 (360)
T ss_dssp EEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCC
T ss_conf 26630455713530354322110012577999999959985575333544023203641179852469601206877767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~ 320 (360)
T d1k32a3 241 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDL 320 (360)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred CCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
T ss_conf 15531136526654001012476752675413898569999735997069996489987999979997498864886879
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------6
Q 001706 633 ---------------------------------------S 633 (1024)
Q Consensus 633 ---------------------------------------~ 633 (1024)
-
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~~ 360 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCEE
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCC
T ss_conf 9999898999997899499999999985459984162259
|
| >d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Bacteriochlorophyll A protein superfamily: Bacteriochlorophyll A protein family: Bacteriochlorophyll A protein domain: Bacteriochlorophyll A protein species: Prosthecochloris aestuarii, strain 2k [TaxId: 1102]
Probab=100.00 E-value=0 Score=27037.02 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 tTtA~~Dyeiileggssswg~vk~rakvNVP~a~pllp~dc~iKi~~Kpl~~~kgvVR~t~~ieSiVDstknkl~vE~DI 80 (359)
T d4bcla_ 1 TTTAHSDYEIILEGGSSSWGQVKGRAKVNVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVDI 80 (359)
T ss_dssp CCEEEEEEEEEECCTTCCCEEEEEEEEECSCCCCSSCCEEEEEEEEEEECC---CCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHCCEEEEEEEE
T ss_conf 94212334789707876531023567603898777766666227620205776786999864045776401404899862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ANEtkdrRiavGEG~vsVGdFSH~FsfEGsVvnl~YyRsdavrrNvpnp~ymqGrqfHDi~mkVPldn~dlIdTWe~~~~ 160 (359)
T d4bcla_ 81 ANETKDRRIAVGEGSLSVGDFSHSFSFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVDTWEGFQQ 160 (359)
T ss_dssp EESSSSEEEEEEEEEEEETTEEEEEEEEEEEEEEESCCCHHHHTTCSSCCCCCEEEEEEEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCEEEECCCEEEEEEEEEEEEEEEECCHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHHHHHHH
T ss_conf 35787640673243387602224578620488999950146763599865552731100478558995568899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 a~~~~~~nF~dwIrdfWfIGPa~~al~egGQ~is~I~v~~~~~e~g~k~pvgv~rwrfsh~gsgivdsisrw~elfp~d~ 240 (359)
T d4bcla_ 161 SISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGEKGPVGVTRWKFSHAGSGVVDSISRWTELFPVEQ 240 (359)
T ss_dssp HC---CCSHHHHHHHHHSTTTHHHHHHHTTEEECCCEEEEEEEECC---CEEEEEEEEEEEESSCCHHHHTTTTTCCGGG
T ss_pred HHHCCCCCHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH
T ss_conf 87538974566556514522778888752730330799741025688787553267863787510226777887477634
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~~pa~ieg~frsdsqgievkvdg~lpgvsvdaggg~rrilnhpliplvHHGmvgk~n~f~vd~q~kv~lPkGyK~ryaA 320 (359)
T d4bcla_ 241 LNKPASIEGGFRSDSQGIEVKVDGNLPGVSRDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDTQLKIVLPKGYKIRYAA 320 (359)
T ss_dssp CSSCEEEEEEEEECSSCEEEEEEEEETTSEEEEETTEEEECCCCHHHHHHHTTTTTSSCCEEEEEEEEECCTTCEEEEEE
T ss_pred CCCCCEECCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHCCCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEECC
T ss_conf 39850441454456774489982456860442788722441688620031230312577613368999726871676516
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
.
T Consensus 321 pqf~sqn~eey~wsGG~Ya~W~EhvCKGg~gqF~ilyaq 359 (359)
T d4bcla_ 321 PQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ 359 (359)
T ss_dssp SCCSEEETTEEEEESHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred CHHHHCCHHHEEECCCHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 301001254368637147888875414887754788429
|
| >d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Glycolate oxidase species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=100.00 E-value=0 Score=27033.72 Aligned_cols=1 Identities=0% Similarity=1.001 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~i~d~~~~A~~~lp~~~~~y~~gga~~~~t~~~N~~~Fd~i~l~pr~L~d~~~iDlst~~lG~~~~~P~~IspMtg 80 (359)
T d1goxa_ 1 MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAM 80 (359)
T ss_dssp CCCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSC
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
T ss_conf 95467999999999868888889870567741999999999984626331246887798755678835578615265323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~~~~~~~e~~lA~aA~~~gi~~~~~s~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~vd~~~ 160 (359)
T d1goxa_ 81 QKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 160 (359)
T ss_dssp GGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 46677864787656688629722334554565023677469984112222106778999999888754033442224102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~kg~~~~~da~~ 240 (359)
T d1goxa_ 161 LGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 240 (359)
T ss_dssp CCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 22344412442357853314566553036676556411799998513788999999999861566532200244688899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~~~g~~~~~vsnhggr~ld~~~~~~~~l~~i~~~~~~~~~iiadGGIR~G~Di~KALaLGAd~vgigrp~L~~la~~g~ 320 (359)
T d1goxa_ 241 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320 (359)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHCCCCCEECCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCH
T ss_conf 98706653220321110000000025445566503478621465057575778999998489989876899999984349
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
+
T Consensus 321 ~gv~~~i~~l~~EL~~~M~l~G~~~i~~L~~~~l~~~~~ 359 (359)
T d1goxa_ 321 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCC
T ss_conf 999999999999999999985899978959954657899
|
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=0 Score=27029.96 Aligned_cols=1 Identities=0% Similarity=1.001 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98417603379998533999999999999998999999999624677899865999727899965799999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHWLS~vP~~l~ 160 (359)
T d1m6ex_ 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIE 160 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCC
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCC
T ss_conf 98638999972899847888526799998463012678875898657722320178874577642003344303885445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~dmv~eG 240 (359)
T d1m6ex_ 161 SNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEG 240 (359)
T ss_dssp CCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 78886797479998999999999999999999999998357857999985567898888863518999999999999859
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~a~~~RA~~e~~l~~hf 320 (359)
T d1m6ex_ 241 LIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF 320 (359)
T ss_dssp CSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98899997316842668889999885148975655447654154201223444565889999999999999999999985
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
.
T Consensus 321 g~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~~ 359 (359)
T d1m6ex_ 321 GEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKSD 359 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
T ss_conf 828899999999999996076549953999999996689
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=27028.60 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~gPL~girVld~~~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i 80 (359)
T d1x74a1 1 AGPLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLI 80 (359)
T ss_dssp CCTTTTCEEEEECCSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEE
T ss_conf 98999989998278308999999999839979998999999813456651898599972859899999999986689988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~n~~pg~~~~lgl~~~~l~~~nP~lI~~sisgfG~~Gp~~~~~~~D~~~qA~sG~~~~~g~~~~~P~~~~~~~~d~~~g~ 160 (359)
T d1x74a1 81 EGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGS 160 (359)
T ss_dssp ECSCTTHHHHHTCSHHHHHHHCTTCEEEEEESSCSSSTTTTSCCCHHHHHHHTSTGGGSSCTTSCCCCCTTCCCCCCTTH
T ss_pred ECCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH
T ss_conf 66888736541898788776347816999968988898666565654455556622212789999878732189876799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~y~t~DG~~i~~~~~~ 240 (359)
T d1x74a1 161 MFLLVGILAALWERQSSGKGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIE 240 (359)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCSSTTCSTTTTCSTTEEEEECTTSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECC
T ss_conf 99999999999999856997486311167788877799999980798865688867666765476254788368996277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~el~~~l~~~~~~~t~~e~~~~l~~~gvp~~pV~~~~ev~~dpq~~~r~~~~~ 320 (359)
T d1x74a1 241 PQFYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAFGEVHNEPHIIERNTFYE 320 (359)
T ss_dssp HHHHHHHHHHHTCCGGGSCCTTCGGGHHHHHHHHHHHHHTSCHHHHHHHTSSSSSCEEECCCHHHHTTCHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCHHHHHHCCEEE
T ss_conf 78777654121201344321101444688899998776666489999999767970895289999874978897199998
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~p~~s~tp~~~~~~P~lGeht~eIL~e~lG 359 (359)
T d1x74a1 321 ANGGWQPMPAPRFSRTASSQPRPPAATIDIEAVLTDWDG 359 (359)
T ss_dssp CSSSEEECCSSEESSSCCCCCCCCCCCCCHHHHHHHHTC
T ss_pred ECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 689114578878899998899999999789999997279
|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V alpha chain (RecD) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27027.20 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~l~~~~~~~~~r~~d~~fa~~~~~~~~~~~~l~~al~s~~~~~Gh~cl~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1w36d1 1 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNW 80 (359)
T ss_dssp CTHHHHHHHHHTTSSCHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHTTCSEEETTTTTTGGGGSSSCCCCSSCCTTCSTH
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHCCCCCHHHH
T ss_conf 96899999998183568999999998558985899999999999839997627999751200244430222155558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~l~~~~~v~~~~~~~p~vl~~~~lyl~~~~~~E~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~A~~~a 160 (359)
T d1w36d1 81 EECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVA 160 (359)
T ss_dssp HHHHHHSTTEESSSSCCSEEECSSEEEEHHHHHHHHHHHHHHTSCCBCCCCCHHHHHHHHHTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99987276656777888658778884047899999999999998637799983789999997465765663899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (359)
T d1w36d1 161 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 240 (359)
T ss_dssp HTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSCCCCSCSCCCBTTT
T ss_pred HCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 70885999768988752169999999999875269828984375999999998887777645810445542013455789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~~~~~~lILvGD~~QLppV~~G~vl~dl~~~~~~~~ 320 (359)
T d1w36d1 241 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGF 320 (359)
T ss_dssp SCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTCCTTCEEEEEECTTSGGGTSTTBCHHHHGGGGTTCC
T ss_pred HHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCC
T ss_conf 98763100067777543666541346533214489999999987259998999777221668788818999999773477
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~l~r~~~~~~~~~~~~~~~~i~d~l~~L~knyR 359 (359)
T d1w36d1 321 TAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR 359 (359)
T ss_dssp CHHHHHHHHHHSSSCCCCCSTTTTHHHHTTEEECCCCCC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHCCCCCCC
T ss_conf 899999999985410001333334202172112545789
|
| >d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TROVE domain-like family: TROVE domain-like domain: 60-kda SS-aARo ribonucleoprotein species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Probab=100.00 E-value=0 Score=27026.50 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~q~~p~~~~qv~N~aGg~a~~~~~~~~L~rfl~~Gt~~~tyY~~~~~l~~e~~~~l~~l~~~~~~~~~v~~l~~~~~~g 80 (359)
T d1yvra1 1 MDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEG 80 (359)
T ss_dssp CCTTSCSSTTCEECTTSCEEEECCHHHHHHHHHHHCCTTCCSSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 98777698211556667720369989999999961368986745826526889999999997278278999999998437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~r~~p~l~aLal~a~~~d~~~r~~a~~~~~~v~r~~~~L~~fv~~~~~~~~~~~~~~~gr~lrkav~~Wy~~~~~~~L 160 (359)
T d1yvra1 81 RAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNL 160 (359)
T ss_dssp CSSCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
T ss_conf 88784269999999986898889999999999996682189999999998536768786258999999999864998999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 A~~~~Ky~~r~gwShkDlLrl~Hpkp~~~~~~~l~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 240 (359)
T d1yvra1 161 AMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEI 240 (359)
T ss_dssp HHHHTSCCCSSSCCHHHHHHHTTCCCSSHHHHHHHHHHHTCHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998517778997999999808999847899999999638511111134433660379999999999998715878889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~lI~~~~Lt~E~~p~~~~~~~~vWeaLi~~mp~~ALLRNL~~l~~~gvl~~~~~~~~~V~~rL~D~~~l~~arihP~~~ 320 (359)
T d1yvra1 241 IHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHI 320 (359)
T ss_dssp HHHHHHHCCCGGGSCTTGGGCHHHHHHHHHTCCHHHHHHHHHHHHHTTTTCTTCHHHHHHHHHHTCHHHHHHTTCCHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHH
T ss_conf 99999728989870144316899999998718899999978877452567877278999999847999999725582999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
=
T Consensus 321 L~A~~~Y~~g~~~~~~~~w~p~~~i~~AL~~A~~~sf~~ 359 (359)
T d1yvra1 321 LVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKL 359 (359)
T ss_dssp HHHHHHHHHCC-----CCCCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999984478666677788599999999999987079
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27024.63 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~K~K~aVLl~n~G~P~s~~dv~~yL~~~~~d~~vi~~P~~~~l~~~i~~~r~~~~~~~Y~~igg~SPL~~~t~~q~~~l~ 80 (359)
T d2hrca1 1 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMV 80 (359)
T ss_dssp CCCCEEEEEEECCCCSSGGGHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99966999974799999789999999974799721163488888887411008899999863899922999999999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~L~~~~~~~~~~~v~~amry~~P~i~~~l~~l~~~G~~~iv~lPLyPqyS~sTtgs~~~~~~k~l~~~~~~~~~~~~~i 160 (359)
T d2hrca1 81 KLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTI 160 (359)
T ss_dssp HHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHHTSCCSSEEEEE
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 89876347665437998514355305889999985587440010155423412003226899999998541013566434
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~p~yi~a~a~~i~~~~~~~~~~~~~~~~llfS~HglP~~~~~~gdpY~~q~~~t~~~i~~~l~~~~~~~~~fQSr 240 (359)
T d2hrca1 161 DRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSK 240 (359)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSCGGGTTTCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECC
T ss_conf 67788188999999999999972553357772699961123131454189517889999999998734430333244447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~g~~~Wl~P~~~~~l~~l~~~G~k~v~v~p~gFvsD~lETl~Eidie~~e~~~~~~G~~~~~~vp~lN~~p~fi~~la~l 320 (359)
T d2hrca1 241 VGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADL 320 (359)
T ss_dssp CSSSCBSSSBHHHHHHHHHHTTCCEEEEEECSCSSCCHHHHTTTTTHHHHHSCSSSCCSEEEECCCSTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 79976679858999999997499739998986566534679988899999999975996489827999998999999999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
-
T Consensus 321 v~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 359 (359)
T d2hrca1 321 VHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 359 (359)
T ss_dssp HHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTCCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 999864788777556888999887103888850053779
|
| >d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type B [TaxId: 5061]
Probab=100.00 E-value=0 Score=27024.17 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 a~v~g~a~Gfa~~ttGG~~g~v~~Vtt~~eL~~al~~~~PriI~~~gtid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1qcxa_ 1 AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLHS 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98776676055688788897489938999999986289974999886681344556322334245554322222325332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~Dai~i~~ 160 (359)
T d1qcxa_ 81 WCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD 160 (359)
T ss_dssp HHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEES
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEEEECCCCEEEECEEEECCCCCCCCCCCEEEEEC
T ss_conf 22344556762035530267650784798749851588189746568886784489969098558777787897478617
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 s~nvwIDH~s~s~~~d~~~~~~~~~s~~vTvs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~~~R~P~~ 240 (359)
T d1qcxa_ 161 SDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV 240 (359)
T ss_dssp CCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEECCCCCCCCEEEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 88789982564456887537602677756865307616754101256567787400279861999925615887778606
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~ 320 (359)
T d1qcxa_ 241 QGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSG 320 (359)
T ss_dssp CSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEECSSCSSEEECCCSHHHHGGGHHHHSSCCCCCEEESCC
T ss_pred CCCCEEEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 07844899941796767778824775189998158889887665564320304687554531245556400011335676
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~t~~~a~~v~~~V~~~AG~GK 359 (359)
T d1qcxa_ 321 SMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQGK 359 (359)
T ss_dssp CCCCBCGGGGGGGTTSCCCCCCCGGGHHHHHHHHSSTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 314688530046677663576899999987775289999
|
| >d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type A [TaxId: 5061]
Probab=100.00 E-value=0 Score=27021.91 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~v~~~a~Gfa~~ttGG~~g~~~~Vtt~~eL~~al~~~~PriI~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1idka_ 1 VGVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQDD 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97565574144578788897379938999999986289974999863480356644112333234565431101114443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~DaI~i~~ 160 (359)
T d1idka_ 81 WCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDD 160 (359)
T ss_dssp HHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECS
T ss_pred CCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCEEECCCCCCCCCCCEEEEEC
T ss_conf 22235556763014532167770572799608861588499657468874682199979599568777787887588517
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 s~nVwIDH~s~s~~~d~~~~~~~~~s~~vTis~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~~~R~P~~ 240 (359)
T d1idka_ 161 CDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV 240 (359)
T ss_dssp CEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEEECCCCCCCEEEECCCCCCEEEECEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEE
T ss_conf 86489980060357788635610578726620406523312234566556687332289862899924981577888401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 320 (359)
T d1idka_ 241 QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGEVCSTYLGRDCVINGFGSSGT 320 (359)
T ss_dssp CTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEEEESSEEECCSSTTGGGGGHHHHSSCCCCCEEESSCC
T ss_pred CCCCEEEEECCEEECCCCEEEECCCCEEEEEECEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34305999876997762557835775158996618867767754467723733567777421244476443113354664
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~nAG~Gkl 359 (359)
T d1idka_ 321 FSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGNL 359 (359)
T ss_dssp CCCBCCTTGGGGTTSCCCCCCCGGGHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 366776521355665545768878977766434898879
|
| >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Alcohol dehydrogenase TM0920 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27024.22 Aligned_cols=1 Identities=0% Similarity=0.703 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~f~f~~P~~i~fG~g~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~ 80 (359)
T d1o2da_ 1 VWEFYMPTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVE 80 (359)
T ss_dssp CCCCCCCCEEEESTTHHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHH
T ss_pred CEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 93737999899948999999999997599589998586888740999999999876984999757468979899987642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~~avi~~~~~~~k~~ 160 (359)
T d1o2da_ 81 RYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGC 160 (359)
T ss_dssp HHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCCEEEEECTTSCEEEE
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHCCCCC
T ss_conf 00135775688516642001899999998489971331167534457787588426455422114214545675500102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~a~~ai~~~~~~l~~~~~~~~~a~~~l~~as 240 (359)
T d1o2da_ 161 TLMFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEGNREARKKMFVAS 240 (359)
T ss_dssp ECCCCSEEEECGGGGGGCCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 35778768860754058534445665317999988876400255156688999999999876532104699999877899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~g~a~~~~g~g~~Hai~h~l~~~~~i~HG~~~ai~lp~v~~~~~~~~~ek~~~ia~~lg~~~~~~~~~lglp~~lg~~ 320 (359)
T d1o2da_ 241 CLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVS 320 (359)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTTCHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99987551678644410245213303877412578879999999998759999999999889999999985991005979
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------6
Q 001706 633 --------------------------------------S 633 (1024)
Q Consensus 633 --------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~i~~~~~~a~~~~~~~~np~~~t~e~i~~il~~alg~ 359 (359)
T d1o2da_ 321 SEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGV 359 (359)
T ss_dssp HHHHHHHHHHHTTCGGGGGSSSCCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999987385021899468999999999987669
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=0 Score=26949.12 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~p~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l 80 (358)
T d2hdsa1 1 APQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEI 80 (358)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 96789999999999999838998699999999999999688602566988999997863045999999999999755986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~llg~iie 160 (358)
T d2hdsa1 81 KLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAV 160 (358)
T ss_dssp CTTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
T ss_conf 42300010000002321101455665026768980430121222089999876175335898426743541110013231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~tg~~~~~~~~~~i~~PLgm~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~f~~~~l~~~~~ 240 (358)
T d2hdsa1 161 KPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDI 240 (358)
T ss_dssp GGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCTTHHHHTCCEECHHHHHHHHHHHHCGGGC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCC
T ss_conf 13699821202667775059642527898467315102433686412344545578764623899999999998589987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~G~~~G~~ 320 (358)
T d2hdsa1 241 NEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFG 320 (358)
T ss_dssp SSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCTHHHHTSTTSSSSCCCEECEEEEEEECCCSSEEEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
T ss_conf 86888888877632302368766555402035667753234676655211234444556777777850797345267425
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
.
T Consensus 321 s~~~~~Pe~~~~ivvltN~~~~~~~~~~~~~~il~al~ 358 (358)
T d2hdsa1 321 SYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ 358 (358)
T ss_dssp EEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 89999987997999997799998789999999999759
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=100.00 E-value=0 Score=26948.90 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 GFID~HtH~D~~~~~~p~~~~~~~~GVTT~v~GncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~~~~~N 80 (358)
T d1m7ja3 1 GFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVN 80 (358)
T ss_dssp CEEESSCCCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSE
T ss_pred CCEECCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 92522788845532597986414699764888177777145775442005778504777686789999999973587654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 va~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~ 160 (358)
T d1m7ja3 81 AACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHM 160 (358)
T ss_dssp EEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEEC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 03541455554415583023578899999999999999658765235775441035898999999988886098346653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 r~~~~~~~~~~~e~~~~a~~~g~~~~ish~~~~~~~~~~~~~~~~~~~~~a~~G~~i~~d~yPy~ag~t~l~~~~~~~~~ 240 (358)
T d1m7ja3 161 RDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQDVSLDAYPYVAGSTMLKQDRVLLAG 240 (358)
T ss_dssp SCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHSCEEEEECSCSCEEEECCCCTTTTSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 25663178888999999997298657513345777652568999999999863798641215854134522234444133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~G~~l~eiA~~~g~~p~d~~~dl~~~~~~~~~~~e~~v~~~l~~p~~~igSDgga~~~~~hpr~~gt 320 (358)
T d1m7ja3 241 RTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGT 320 (358)
T ss_dssp CEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHH
T ss_pred CHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 30110266676542574999998839987887888742210010589999999983999228767665789958888661
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
.
T Consensus 321 f~r~L~~~vRe~~~lsLeeAI~k~T~~pA~~~Gl~dRG 358 (358)
T d1m7ja3 321 FPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERG 358 (358)
T ss_dssp HHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCS
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999567881789999999987999983987899
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=100.00 E-value=0 Score=26946.80 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~dpr~dP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~ 80 (358)
T d1jkma_ 1 PGRLGDESSGPRTDPRFSPAMVEALATFGLDAVAAAPPVSASDDLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETS 80 (358)
T ss_dssp CHHHHCTTCCTTTCTTSCHHHHHHHHTTTTTSCCCCCSSCTTSCHHHHHHHHHHHHHHHHHHHHHSCCCCTTCCCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 99888987786779998999999997536665677998783315599999987647999988755454269988885079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~ 160 (358)
T d1jkma_ 81 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS 160 (358)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH
T ss_pred EEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
T ss_conf 99996789988899999417888898749996387104066542221067888875100133000001246565677733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 240 (358)
T d1jkma_ 161 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 240 (358)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCH
T ss_conf 56777888889987232468754034444672679999999976527876542223455211366576411110234210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~ 320 (358)
T d1jkma_ 241 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLRDEGIAFARRLARAGVDVAARV 320 (358)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 00234445516666677642775577457300234530110258999899987887787999999999998799589999
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
.
T Consensus 321 ~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 358 (358)
T d1jkma_ 321 NIGLVHGADVIFRHWLPAALESTVRDVAGFAADRARLR 358 (358)
T ss_dssp ETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 79896463542466697899999999999999897569
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=0 Score=26945.70 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~ 80 (358)
T d1ecea_ 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSIN 80 (358)
T ss_dssp CCCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCC
T ss_pred CCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCC
T ss_conf 99970996099799999989999987667411345666667724799999999976998899347688746877777755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~ 160 (358)
T d1ecea_ 81 FYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLH 160 (358)
T ss_dssp CSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECS
T ss_pred CCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 33368111011699999999999997899066401356666888655688277999999999998864476536755320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y 240 (358)
T d1ecea_ 161 NEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDY 240 (358)
T ss_dssp SCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
T ss_conf 33456776775413455899999999999850899589996546676665322566430432776678667658986414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~W~ 320 (358)
T d1ecea_ 241 ATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWS 320 (358)
T ss_dssp CTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSHHHHHHHHHHHHHTCCHHHHTTSSCEEEESC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 78767753456630356677788889999998459709992678888999869999999999999998540181699973
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
-
T Consensus 321 ~k~~~~~~~G~~~~dw~~~~~~~~~~i~~~~~~~~~~~ 358 (358)
T d1ecea_ 321 WNPDSGDTGGILKDDWQTVDTVKDGYLAPIKSSIFDPV 358 (358)
T ss_dssp SCSCCTTTCCSBCTTSSSBCHHHHHHHGGGCCCCCCCC
T ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCC
T ss_conf 77777887640169888878366532030213568989
|
| >d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class II FBP aldolase domain: Fructose-bisphosphate aldolase (FBP aldolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26945.41 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~v~t~~nlk~~L~~A~~~~yAV~AfNv~n~e~~~Aii~AAee~~sPvIlq~s~g~~~y~gg~~~~~~~~~~ 80 (358)
T d1dosa_ 1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQG 80 (358)
T ss_dssp CCGGGTCCSEECCTHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTH
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHH
T ss_conf 94663346776757999999999998795699878698999999999999968998999061688770764156668767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~a~~v~~~a~~~~VPV~lHLDHg~~~~~~~i~~~idag~~~~~~~~~~gfsSVMiDgS~l~~eeNi~~Tk~v 160 (358)
T d1dosa_ 81 AAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKY 160 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88888898999999999837997899657652146778887788899999982777776556778857789999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ve~Ah~~gv~VEaElG~igg~Edg~~~~~~~~~~~~T~peea~~~~~ef~~~tgvD~LAvaiGt~HG~Yk~~~~~l~p~l 240 (358)
T d1dosa_ 161 LERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCCHH
T ss_conf 99985537768984336404567753210102330599899999999876467651565432614553478876677014
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~i~~~~~vp~~~~~LVlHGgSGip~e~i~~ai~~GV~KiNi~Tdlr~a~~~~ir~~~~~n~~~~~~~~~~~~~~ 320 (358)
T d1dosa_ 241 LRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGE 320 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHGGGSSSSEEETTEE
T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
T ss_conf 69999999987289986534120588897688999999819848961719999999999999984846541113675444
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~k~~fDPrk~l~~a~~am~~~v~~~~~~fgs~nkl 358 (358)
T d1dosa_ 321 DQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358 (358)
T ss_dssp EEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 57777767908889999999999999999982897779
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26947.89 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 dRv~P~C~~f~~CGGC~~qh~~y~~Ql~~K~~~l~~~~~~~~~~v~~~~p~~YR~r~~~~v~~~~~~~~~~~Gf~~~~s~ 80 (358)
T d1uwva2 1 ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSS 80 (358)
T ss_dssp TBCCCSCTTTTTBTTCSCTTBCHHHHHHHHHHHHHHHHTSCCCEEECCCSSSCBSEEEEEEEEETTTTEEEEEEEBTTSS
T ss_pred CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
T ss_conf 98898999999485861008999999999999999862765676657888777415999845765889569989735884
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~iV~i~~C~i~~~~i~~~l~~lr~~l~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (358)
T d1uwva2 81 DIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAP 160 (358)
T ss_dssp CEEECSCCTTBCHHHHHHHHHHHHHHTTCGGGGGEEEEEEEEETTEEEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 06614125145577999999988754033445520399999831880899995266677789999975311363899940
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~g~~~~~~~~g~~~~i~p~sFfQ~N~~~~e~l~~~v~~~~~~~~~~~vlDLycG~G~fsl~La~~~~~V~gv 240 (358)
T d1uwva2 161 DSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV 240 (358)
T ss_dssp SSSCCEEEECCCCEEEETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEE
T ss_pred CCEEEEEECCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEC
T ss_conf 43367762487248960888999877133003303446779889875246788449995366665521003565279822
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 E~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~l~~~~~~~ivYVSCnp~Tl 320 (358)
T d1uwva2 241 EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL 320 (358)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 47499999999848755324621342204543234455404675599679973479999999974999899992898998
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
=
T Consensus 321 aRDl~~l~~~gy~l~~i~~~D~FP~T~HvE~v~~l~Rv 358 (358)
T d1uwva2 321 ARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRV 358 (358)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC-
T ss_pred HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEEEC
T ss_conf 87799998779767599997359998618999999969
|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase A, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26944.51 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~p~~~~~~~~~~~~~~~~~~~v~~Yy~~W~~y~~~~~~~~I~~~~~THi~YAFa~v~~~~~~~~~~~~~~~~~~ 80 (358)
T d1edqa2 1 TDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQ 80 (358)
T ss_dssp TTCTTSCCCCCCCCTTCCCBCCCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99754688779778889888789998999995952023899992469986797699950772698874654222333222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~LK~~~p~lKvllSiGGw~~s~~~~~~a~~~~R~~ 160 (358)
T d1edqa2 81 ALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDR 160 (358)
T ss_dssp HHHHHTTTCCTTSBCCSCHHHHHTSCBTTBCSTTCSSCHHHHHHHHHHHHCTTCEEEEEEECSSSCGGGGGTTSHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 22224466777615612714432033467664344344289999999974899769999989987888602358789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 Fi~svv~~l~~y~~fDGIDIDWEyP~~~g~~~~~~~~~D~~nf~~Ll~eLR~~l~~~~~~~~~~~~ls~a~~~~~~~~~~ 240 (358)
T d1edqa2 161 FVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDK 240 (358)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECSHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 99999999998353786131124323345778778978998999999999999887643317742025650476445413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~l~~~vD~inlMtYD~~G~w~~~~~g~~t~l~~~~~~~~~~~~v~~~v~~~~~~Gvp~~KlvlGip~YGRs~~~K~ 320 (358)
T d1edqa2 241 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQAKG 320 (358)
T ss_dssp SCHHHHGGGCSEEEEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHH
T ss_conf 21777863378898860245577787887877888887667877652999999999878998896999685479999887
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------6
Q 001706 633 -------------------------------------S 633 (1024)
Q Consensus 633 -------------------------------------~ 633 (1024)
.
T Consensus 321 ~y~~~~~lgG~~~W~~~~D~g~ll~a~~~~l~~~~~~~ 358 (358)
T d1edqa2 321 KYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ 358 (358)
T ss_dssp HHHHHHTCCEEEEECGGGCCSHHHHHHHHHTTCCBSCC
T ss_pred HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 78862897439887156786289999998647854679
|
| >d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26877.83 Aligned_cols=1 Identities=100% Similarity=1.766 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~w~Fd~f~l~~~~~~~~L~~~~~~if~~~~l~~~f~i~~~~l~~Fl~~v~~~Y~~~~nPYHN~ 80 (357)
T d1taza_ 1 VGPTYSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKYKNPYHNQ 80 (357)
T ss_dssp CCCCCCHHHHHHHTTTTSTTCCHHHHHHHTTSCHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHHHHTTTCCSSSSH
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99889899999986455699980130101389829999999999878376439899999999999998457789875359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HD~~HpG~~N~flv~s~~~LA~lYnd~SvLEnhH~~~~~~lL~ 160 (357)
T d1taza_ 81 IHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISSVFRLMQ 160 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999635632338999999999999988248899635799863887888639987789999999999980
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~i~~~l~~~~~~~~r~~ii~~ILaTDm~~H~~~l~~~~~~~~~~~~~~r~~~~~~lik~ADis~~~rp~~~~~~W~ 240 (357)
T d1taza_ 161 DDEMNIFINLTKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWT 240 (357)
T ss_dssp SGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTCGGGSCHHHHHHHH
T ss_pred CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 61000103899899999999999998222267689999999999974114109999999998623554236779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~l~~Ef~~Qgd~E~~~gl~~sp~~dr~~~~~~~~QigFi~~iv~Plf~~l~~~~p~~~~p~~~~~~~n~~~~~~~~~~~ 320 (357)
T d1taza_ 241 KALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADEDSKSKNQPSFQWRQP 320 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998899845999987668754320788999999999999999998770653688899999999899987641
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~en~~~~~~~~a~ 357 (357)
T d1taza_ 321 SLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAAS 357 (357)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 2234557876234321314556545438999987439
|
| >d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=100.00 E-value=0 Score=26877.45 Aligned_cols=1 Identities=0% Similarity=1.001 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~el~~~a~~~~~~GKGilAADeS~gT~~Krl~~iGventEenr~~~R~~l~tsp~~~~ 80 (357)
T d2qapa1 1 MSRVTVLQSQLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQ 80 (357)
T ss_dssp CCEEEEEGGGSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGG
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 96121111037775445847899999999998079986998358998277789876999978999999998847987555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~IsGvILfeeTm~q~~~~g~~~~~ll~~kGIVPgIKVDkGl~~~~~G~~~ek~t~gLD~L~~R~~ey~~~Ga~faKwRsV 160 (357)
T d2qapa1 81 YISGVILHDETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNV 160 (357)
T ss_dssp TEEEEEECHHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEEECHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHC
T ss_conf 44689812898732302799779999847981544247751478789974642625677999877754233300310100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 i~i~~~~ps~~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vte~vl~~~~~~l~~~~V~Leg~lLKp 240 (357)
T d2qapa1 161 YKIQNGTVSESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKP 240 (357)
T ss_dssp ECCBTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 43666775044466568999999999997497631051233224564688899999999999998875314445776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 nMv~~G~~~~~~~~~e~va~~tv~~l~~tvP~~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~lsfSfsRALQ~s~L 320 (357)
T d2qapa1 241 NMVVPGAESGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSAL 320 (357)
T ss_dssp CCCCCCTTSSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
T ss_conf 42224543345688556302356665214797787113147886789999999997424578998589863397608999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
.
T Consensus 321 k~W~g~~env~~aQ~~~~~Ra~~ns~A~~G~y~~~~e 357 (357)
T d2qapa1 321 KAWGGKESGLAAGRRAFLHRARMNSMAQLGKYKRSDD 357 (357)
T ss_dssp HHHTTSGGGHHHHHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9857974639999999999999868986688687789
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=26875.25 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~f~~~~f~l~~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyf 80 (357)
T d2b61a1 1 SVQNVVLFDTQPLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYF 80 (357)
T ss_dssp CCEEEEESSSSCEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCE
T ss_pred CCCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEE
T ss_conf 97428998479825689986589569999623337889988998488776653335678887588712799766777518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 VI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~ 160 (357)
T d2b61a1 81 FISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMD 160 (357)
T ss_dssp EEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99855667766667767889888997776422110689999999999871866488884040788899999874267774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~ 240 (357)
T d2b61a1 161 NIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWG 240 (357)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 33244456433235788878899999828777788755688830689999999886404789999874522234433236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~ 320 (357)
T d2b61a1 241 DYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQ 320 (357)
T ss_dssp CCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 53569999999889887607999999999986632654333338999862699889998477506598999999999986
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~~ 357 (357)
T d2b61a1 321 SGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN 357 (357)
T ss_dssp TTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 6998699997999875554769899999999997359
|
| >d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=100.00 E-value=0 Score=26872.36 Aligned_cols=1 Identities=0% Similarity=0.869 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 M~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~dail~Gai~~p~~~~ 80 (357)
T d1a05a_ 1 MKKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDA 80 (357)
T ss_dssp CCEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTT
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 97899977678669999999999999987708985999997552425441994899999999973065406656887567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~lR~~ldlyanvRP~k~~pg~~~~~pl~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~a~~~~ 160 (357)
T d1a05a_ 81 YPPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVIDGKRRGFNTM 160 (357)
T ss_dssp SCGGGSHHHHHHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEE
T ss_conf 78555666477889975695588777640367666789886667761399987455643357753221267764899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~t~~~~~ri~~~Af~~a~~r~k~vt~v~K~ni~~~~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (357)
T d1a05a_ 161 VYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETTRLWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLT 240 (357)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 96289999999999988645786488885366411368999999999865898278751799999998745456567851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~Av 320 (357)
T d1a05a_ 241 GNMFGDILSDEASQLTGSIGMLPSASLGEGRAMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAV 320 (357)
T ss_dssp CHHHHHHHHHHHHHTTSCGGGCEEEEECSSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 17888878899988735765410300068730102456878000589865949999999999972089879999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~i~~g~~T~Dlgg~~t~~~~T~e~~daV~~~l~~~ 357 (357)
T d1a05a_ 321 QRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALNLK 357 (357)
T ss_dssp HHHHHTTCCCGGGCCTTSCCCCHHHHHHHHHHTTTCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 9999769967566999998768999999999987469
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=100.00 E-value=0 Score=26872.21 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~p~~~~~~y~~~~G~tG~Gv~VaViDtGvd~~H~dl~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 80 (357)
T d1t1ga_ 1 AAPTAYTPLDVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVE 80 (357)
T ss_dssp CCCEEECHHHHHHHTTCCTTCCCTTCEEEEEESSCCCCHHHHHHHHHHTTCCCCCEEEEESTTCCCCCCSCTTSTHHHHH
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99874789999998787889898897899997688778688987775058878998633799999887876556443005
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~d~~~~~GvAp~A~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~g~~vv~ 160 (357)
T d1t1ga_ 81 LDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLA 160 (357)
T ss_dssp HHHHHHHHHSTTSEEEEEECCSSHHHHHHHHHHHHHCTTTCCSEEEECCCEEGGGSCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 77643125414676998741247884589999998741149808965666576766543489998766532157867999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~p~~~~~~~~~~~~ 240 (357)
T d1t1ga_ 161 AAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSA 240 (357)
T ss_dssp ECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECSSCEEEEEECBCHHHHCBCCCEECSSSCCCGGGTTSCCCCCS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84168743211344544201135776236654023678775445201266666433447744121367523354234556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~~~dit~g 320 (357)
T d1t1ga_ 241 NPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEG 320 (357)
T ss_dssp STTCCCCCEECSEEEECCTTEEEEEEETTEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGGEECCCSC
T ss_pred CCCCCCCCEECCEECCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCC
T ss_conf 67777773313321135787742774699666168831687999999999976405886765999986260133124326
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~~~~a~~G~d~~tG~G~~n~~~~~~~l~p 357 (357)
T d1t1ga_ 321 NNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLP 357 (357)
T ss_dssp BCCCSSSSCCSBCCSSSBTTTBTCEECHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 7788888776567668988846741549999874088
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=100.00 E-value=0 Score=26870.88 Aligned_cols=1 Identities=0% Similarity=-1.822 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lPK~eLH~HL~Gsi~~~~l~~la~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 80 (357)
T d2amxa1 1 EIKFLKKEDVQNIDLNGMSKKERYEIWRRIPKVELHCHLDLTFSAEFFLKWARKYNLQPNMSDDEILDHYLFTKEGKSLA 80 (357)
T ss_dssp SCCCCCHHHHTTCCGGGCCHHHHHHHHHHSCEEECCBBGGGCCCHHHHHHHHHHTTCCTTSCHHHHHHHHCCCSTTCCHH
T ss_pred CCCHHHHCCCCCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHH
T ss_conf 93455522555687000470789999983908898667878999999999999729799999499999874567626599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~f~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~v~y~Elr~~p~~~~~~~g~~~~~v~~~i~~g~~~a~~~~~~~~~~~ 160 (357)
T d2amxa1 81 EFIRKAISVSDLYRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVA 160 (357)
T ss_dssp HHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999878778733899999999999999998415161133454324545676457799999999999987439845898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~a~~~~~~vvGidl~g~e~~~~~~~~~f~~ar~~gl~it~HaGE~~~~~~~~~i~~ai~~l 240 (357)
T d2amxa1 161 LICISDTGHAAASIKHSGDFAIKHKHDFVGFDHGGREIDLKDHKDVYHSVRDHGLHLTVHAGEDATLPNLNTLYTAINIL 240 (357)
T ss_dssp EEEECCCCCSHHHHHTTTHHHHHTTTTEEEEECCSSCCCCGGGHHHHHHHHHTTCEEEEEESCCTTCSSSHHHHHHHHTS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 63210266125557999999996388657312467766623469999999831876443455458999747899999704
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~RIgHGv~~~~d~~l~~~l~~~~I~leiCPtSN~~~~~~~~~~~HP~~~l~~~Gv~v~l~TDDp~~f~t~ls~ey~~~ 320 (357)
T d2amxa1 241 NVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMFLSNINDNYEKL 320 (357)
T ss_dssp CCSEEEECGGGGGCHHHHHHHHHHTCEEEECHHHHHHTTSSSCSTTCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHH
T ss_pred CCCCCCCCHHEECCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHCCCHHHHHHHH
T ss_conf 97313652430058788998887185389887500242358970028999999889959995899412178879999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~ls~~el~~l~~nsi~~sF~~~~~K~~l~~~~~ 357 (357)
T d2amxa1 321 YIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELKALYF 357 (357)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHC
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9981989999999999999986899999999998659
|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Fungal peroxidase (ligninase) species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=26869.36 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 a~c~~g~~~~na~cc~~~~v~~dlq~~~~~~~c~~~A~~~lRL~FHDcfv~~~~~g~~~~gGcDgSill~~~~E~~~~~N 80 (357)
T d1yyda1 1 AVCPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSAN 80 (357)
T ss_dssp CBCTTSCBCSCGGGTTHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTTTGGGSGGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 92899753677435467999999999985587507899999999824105103567678999781302178644678665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~Gld~i~~~~~~~~~~~~~VScADiialAardAV~~~~GGP~~~v~~GR~Da~~a~~~~~LP~p~~~~~~l~~~Fa~~~G 160 (357)
T d1yyda1 81 NGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGG 160 (357)
T ss_dssp TTTHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCTTCSCCTTCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88799999999999637998999999999999997306897204248888642234446789864569999999766512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 lt~~dmVaLsGAHTIG~ah~~~~~~~~~~~~~tp~~fDn~~f~~ll~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~L~ 240 (357)
T d1yyda1 161 FTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQ 240 (357)
T ss_dssp CCHHHHHHHGGGGGGCEESSSSTTCSCEESSSCTTSCSSHHHHHHTBCCCBCSSCSCCTTEECBSCCCCBTTBCCCCEEH
T ss_pred CCHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88377611323331000245677754333466656301799999986368988888887601377744440102466248
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 SD~~L~~D~~T~~~V~~yA~n~~~F~~~Fa~AmvKms~lG~~~~~l~dcs~v~p~~~~~~~~~~~~p~~~~~~d~~~~~~ 320 (357)
T d1yyda1 241 SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNSLIDCSDVVPVPKPATGQPAMFPASTGPQDLELSCP 320 (357)
T ss_dssp HHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHTTTTSCGGGSEECGGGSCCCCCCCCCCCCBCTTCCGGGBCCCCT
T ss_pred HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 99988419889999999965999999999999999997699953144577657899887788876789998676553055
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (357)
T d1yyda1 321 SERFPTLTTQPGASQSLIAHCPDGSMSCPGVQFNGPA 357 (357)
T ss_dssp TSCCCCCCBCSCSSCCCCCSSTTSCSCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999887789985334457899877689756678999
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Probab=100.00 E-value=0 Score=26868.91 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~y~~ 80 (357)
T d1mppa_ 1 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 80 (357)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CCCCCCCEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 95445525458798899999982899599999948975428714899998553589878874587622679445886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 g~~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 160 (357)
T d1mppa_ 81 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 160 (357)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred CCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 71789998350212660488688999994045423215655433211235545776422244688788789999861565
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ilDSGts~~~ 240 (357)
T d1mppa_ 161 SSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFI 240 (357)
T ss_dssp SSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEE
T ss_pred CCCEEEEEECCCCCCCEEECCCCCHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCEEEEECCCCCCEEEECCCCCCC
T ss_conf 55169998336899963987531766727730578721477874368998706998875765328973148613674236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 lp~~~~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~c~~~~~~~~ 320 (357)
T d1mppa_ 241 APSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG 320 (357)
T ss_dssp EEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEECHHHEEEEECCCCCEEEEEECCCC
T ss_conf 98999999999856775346885102420144568507999811565356679998659928996589988999984799
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~ 357 (357)
T d1mppa_ 321 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND 357 (357)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred CCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 9999945697397999998999999999998678998
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=100.00 E-value=0 Score=26868.65 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~g~~~~~~~f~w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~ 80 (357)
T d1gcya2 1 DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFW 80 (357)
T ss_dssp CCCCCCTTCCCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCH
T ss_conf 95556898605358987788624468788777747999999789999739999996947547866777777888788470
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T d1gcya2 81 HDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGD 160 (357)
T ss_dssp SSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTST
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30656866799999999999999638737898700354788875100465688765456677778888878555445665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~dln~~np~v~~~~~~~~~~~~~~~giDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T d1gcya2 161 ADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQ 240 (357)
T ss_dssp TBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSCTTSGGGGSCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf 54477987999999999998777528987999515308999999998501788234543225763011011210110456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~~~~~la~a 320 (357)
T d1gcya2 241 IIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYA 320 (357)
T ss_dssp HHHHHHHHHTSCEECHHHHHHHHHSCGGGGGGSGGGCSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66767640344310035554300456999999985076656645257740477755424457864334287999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
-
T Consensus 321 lllt~pGiP~IyyGde~d~g~~d~i~~li~iRk~~~i 357 (357)
T d1gcya2 321 YILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGV 357 (357)
T ss_dssp HHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9995799127970785467886999999999976879
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26868.31 Aligned_cols=1 Identities=100% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC
T ss_conf 98899968886899999999997869899997897555556688887403303897599982067979988887525987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89985203553446559999999999999999999998489988689999845651889888958999999988699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCEEECHHHHHHHHHH
T ss_conf 99999999999996997899996454599877677714789999999838972699799980444443044878999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred HCCCCCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 27899759978998164599999999983976321455331000233211222433566760376155357886446404
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
|
T Consensus 321 ~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~kk~~ 357 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (357)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 4889999997998689899999999999999970129
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=0 Score=26867.50 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~p~~a~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~ 80 (357)
T d1g01a_ 1 PAGMQAVKSPSEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGY 80 (357)
T ss_dssp CTTCTTCCCHHHHCSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSST
T ss_pred CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 98544567965346788599738589999999999999885676200465568999999998649977988636557887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~ 160 (357)
T d1g01a_ 81 ATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGP 160 (357)
T ss_dssp TTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTSGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 44989999999999999978988998613268888880355666779999999975476237999987516353567654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~ 240 (357)
T d1g01a_ 161 GLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSS 240 (357)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 56676136899999999999999853993499804876665200013557999779998872675677667777566447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~isw~~W~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T d1g01a_ 241 ERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNKNEISGAFTPFELGRTDAT 320 (357)
T ss_dssp GCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCHHHHHHHHHHHHHTTCCEEEEEECCSSSTTCSBCCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78999999999997699889983377678887876789999999999974993589957588776433067665566754
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------6
Q 001706 633 ------------------------------------S 633 (1024)
Q Consensus 633 ------------------------------------~ 633 (1024)
.
T Consensus 321 ~~~~~~~~~w~~~~l~~sG~~v~~~l~g~~~~~~~~~ 357 (357)
T d1g01a_ 321 DLDPGANQVWAPEELSLSGEYVRARIKGIEYTPIDRT 357 (357)
T ss_dssp CSSCCTTCCCCGGGBCHHHHHHHHHHHTCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 5566667888765615467999998536778885789
|
| >d16vpa_ d.180.1.1 (A:) Conserved core of transcriptional regulatory protein vp16 {Herpes simplex virus type 1 [TaxId: 10298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Conserved core of transcriptional regulatory protein vp16 superfamily: Conserved core of transcriptional regulatory protein vp16 family: Conserved core of transcriptional regulatory protein vp16 domain: Conserved core of transcriptional regulatory protein vp16 species: Herpes simplex virus type 1 [TaxId: 10298]
Probab=100.00 E-value=0 Score=26803.84 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~r~psPp~~~sp~~Ly~rLl~eL~F~eGp~Lls~le~wNeDLFSclP~n~dLY~~~~~LSt~~~eVi~~~~~~~p~~~~i 80 (356)
T d16vpa_ 1 SRMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSALPTNADLYRECKFLSTLPSDVVEWGDAYVPERTQI 80 (356)
T ss_dssp CCSCCCCCCCCHHHHHHHHHHHHTCTTHHHHHHHHHHCCCCCSTTSCCCGGGGTTCGGGCSCHHHHHHHHHHCCCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf 99998988789799999999873998517899999984205550377874676531055389899999876179987750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 dL~ahG~~~~P~~Pa~~eeLP~Yv~avq~fF~sELrAREe~Y~~Ll~~YC~AL~~yLr~sa~~~~r~~~~~~~~~~~~~~ 160 (356)
T d16vpa_ 81 DIRAHGDVAFPTLPATRDGLGLYYEALSRFFHAELRAREESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRDRDLGEM 160 (356)
T ss_dssp CTTCCCSSCCCCCCSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 01478998899999882353899999999999999998999999999999999999999887751310344541679999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~rq~i~~rYYRE~arLArllylHLYls~tRevswrl~A~Q~~~q~vF~~L~y~W~q~RQf~ClFhPvlfnhGvV~leg~p 240 (356)
T d16vpa_ 161 LRATIADRYYRETARLARVLFLHLYLFLTREILWAAYAEQMMRPDLFDCLCCDLESWRQLAGLFQPFMFVNGALTVRGVP 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEESCSHHHHSSCCSCSBCCSEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCEEEECCEEEECCCC
T ss_conf 99999999999999999999999999999999999999986132634605740113432367535335417635667987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 L~a~~Lr~~Ny~R~eLGLPlvR~~lvEE~~~pL~~~P~fs~~~pRssGyl~~~IraKmeaYS~~hp~~~~~~~~dH~YaR 320 (356)
T d16vpa_ 241 IEARRLRELNHIREHLNLPLVRSAATEEPGAPLTTPPTLHGNQARASGYFMVLIRAKLDSYSSFTTSPSEAVMREHAYSR 320 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCTTTSCTTSCSCCCCCCCTTSCCHHHHHHHHHHHHHTSTTC-----------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 88899988889998718840110100468987425886556785305689999999864420368888875444576447
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
-
T Consensus 321 ~~~~~nYGst~eaml~~~~~~~p~~~~~~~~r~~~~ 356 (356)
T d16vpa_ 321 APTKNNYGSTIEGLLDLPDDDAPEEAGLAAPRLSFL 356 (356)
T ss_dssp ----------------------------CCCEEEEC
T ss_pred CCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 888888773232101699999635532234321359
|
| >d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Uroporphyrinogen decarboxylase, UROD domain: Uroporphyrinogen decarboxylase, UROD species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26798.35 Aligned_cols=1 Identities=0% Similarity=0.403 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~ne~~l~al~g~~~dr~PVw~MrqAGRylpey~~~r~~~~f~e~~~~pe~~ae~tl~p~~~~~~DaaiifsDil~~ 80 (356)
T d1r3sa_ 1 FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVV 80 (356)
T ss_dssp CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTSCHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCTTHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 99764489999975998999998888445425889999871289999855999999998448986795425622442101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~ealG~~v~f~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~l~~v~eai~~~~~~l~~~~pliGf~ggP~Tla~yli~~~~ 160 (356)
T d1r3sa_ 81 PQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGG 160 (356)
T ss_dssp HHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSC
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC
T ss_conf 34228635644889866776433202332101100002144899999999998735565663032031888999872134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~pe~~~~ll~~lt~~~~~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 240 (356)
T d1r3sa_ 161 SSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 240 (356)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 21378898876303577889999999988999999860566540203520121357888888899999999999875101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~i~~~~~~~~~l~~~~~~g~d~is~D~~~~l~~~~~~~~~~i~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~ 320 (356)
T d1r3sa_ 241 AGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGP 320 (356)
T ss_dssp TTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 24777302101044787888874248561254235799999998489832882888899859999999999999998189
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 ~~~I~nlGhGI~p~tp~env~a~v~~vr~~~k~~~~ 356 (356)
T d1r3sa_ 321 HRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ 356 (356)
T ss_dssp SSEEEEESSCCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCC
T ss_conf 994896999759899999999999999996887459
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=100.00 E-value=0 Score=26796.08 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~g~~g~~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G~TWs~~~~v~~~~~~~~~ 80 (356)
T d1w8oa3 1 GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI 80 (356)
T ss_dssp CCCCEEEEEEEETTSTTCSCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEEEECCBCSSSC
T ss_pred CCCCCCEEECCCCCCCCCEEEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 99741200110057688383670789998999999999646489988887329999906899787788873238887764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~v~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1w8oa3 81 KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS 160 (356)
T ss_dssp BEEEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECGGGSCCSTTCCEEEECS
T ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34466248996899839999964035774443336787787479999983687652104652056655434432123466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 240 (356)
T d1w8oa3 161 GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV 240 (356)
T ss_dssp EECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEE
T ss_pred CCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 32046000244664045553012236632577752688752001446675543316899257620255642555540577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~S~D~G~tw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~~S~D~G~tW~~~~~i~~~ 320 (356)
T d1w8oa3 241 AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG 320 (356)
T ss_dssp EEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCEECCC
T ss_conf 88426887543022014335788787326743665346789809999799998897316999990799155886081799
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 ~~~Ys~~~~~~dg~i~~~ye~g~~~~~~~~~l~~~~ 356 (356)
T d1w8oa3 321 SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAWLG 356 (356)
T ss_dssp ECCCEEEEECTTSCEEEEECCSSEEEEEEECHHHHT
T ss_pred CCCCCEEEECCCCEEEEEEECCCCCEEEEEEHHHCC
T ss_conf 976863689589989999988997389996289979
|
| >d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Bacillus coagulans [TaxId: 1398]
Probab=100.00 E-value=0 Score=26795.30 Aligned_cols=1 Identities=0% Similarity=1.134 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 m~~rI~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~et~e~i~~~dail~Gav~~p~~~ 80 (356)
T d1v53a1 1 MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAGTPLPEETLDICRRSDAILLGAVGGPKWD 80 (356)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHTTSSCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 97079998878765999999999999998624997499999556899997499288999999986082799256798867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~lR~~ldlyanvRPv~~~~gi~~~~p~~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~~~~~ 160 (356)
T d1v53a1 81 HNPASLRPEKGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERRGPGENEVVDTL 160 (356)
T ss_dssp SSCGGGCHHHHHHHHHHHHTCCEEEEEEECCGGGTTTSSBCHHHHTTCEEEEEEECSSBTTTCSCEEEESSTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCCC
T ss_conf 78988583021689998708725566665430344579977667788239996046766065305330224652002200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~t~~~~~ri~r~af~~A~~r~kkVt~v~K~nv~~~~~~~~~~~~eva~eyp~I~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (356)
T d1v53a1 161 AYTREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVDSTSMQLIANPGQFDVIVT 240 (356)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCEEEC
T ss_conf 02321430034577767874598465775254102450586999999836898699998836678898722344664532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~A 320 (356)
T d1v53a1 241 ENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKA 320 (356)
T ss_dssp CHHHHHHHHHHHTTTTSCTTSCEEEEECSSSCEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 67888888899988736763111200268731463378887234448996592999999999998637987999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
+
T Consensus 321 v~~~l~~g~~T~Dl~~~~gg~~~T~e~~dav~~~L~ 356 (356)
T d1v53a1 321 VDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKLN 356 (356)
T ss_dssp HHHHHHTTEESSSSCCTTCEECCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHCC
T ss_conf 999998599473556679970379999999998429
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=100.00 E-value=0 Score=26794.82 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~p~~~~~~~~~~~~~~~~~Rl~~R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~eg~~~~~~ 80 (356)
T d1l0wa3 1 TPPFPVDAGWRGEEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLV 80 (356)
T ss_dssp CCSSCCSSGGGTCCCCCCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHH
T ss_conf 96962685445654456698887413365117887999999999999999999988898999898124677764432002
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~yL~~Spel~lk~ll~~g~~~Vf~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~~~~~m~~~E~li~~v~~~ 160 (356)
T d1l0wa3 81 PYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFRE 160 (356)
T ss_dssp ECTTSTTEEEECCSCSHHHHHHHHHTTCSEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22113201117772856777775232368679982123522268754045668877666788878999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~f~r~~~~~a~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~ 240 (356)
T d1l0wa3 161 ALGVELPLPFPRLSYEEAMERYGSDKPDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 240 (356)
T ss_dssp HTCCCCCSSCCEEEHHHHHHHHSSSSCCCSCCSCCEEEEECCBSBCCCTTTSCCCBSSCTTBCBCSTTTTHHHHCGGGCB
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEEECCCCCCCHHHHCHHHCCCCCCE
T ss_conf 72877778977511776677870474767777566542036653113110012233437743687665100103888620
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 a~~FdL~~~G~ElanG~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~yl~a~~~G~PP~~G~glGldRLlm~l~g~~~Ird 320 (356)
T d1l0wa3 241 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIRE 320 (356)
T ss_dssp BSEEEEEETTEEEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTCCCEEEEEEEHHHHHHHHHTCSSGGG
T ss_pred EEEEECCCCCEEEECCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHH
T ss_conf 21230233878862107871748999999999767832357789999999667989962377709999999809995885
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 vi~FPR~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1l0wa3 321 VIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP 356 (356)
T ss_dssp GSSSCCCTTSCBTTTTBSEECCHHHHHHHTEEECCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCC
T ss_conf 346899999998667899989999998668462185
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=0 Score=26794.76 Aligned_cols=1 Identities=100% Similarity=1.367 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~ 80 (356)
T d1rkxa_ 1 INNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQP 80 (356)
T ss_dssp CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHH
T ss_conf 97344188989997888779999999999779989999789986177776640146876998405685760023430202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44444421565653246775353322334035666643045543222222212234565433322234568988432432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a 240 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCH
T ss_conf 33204566776521342010355733774267776488855143799999999718996688621342122123342200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~ 320 (356)
T d1rkxa_ 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWN 320 (356)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHHHHHHHCCCCCCC
T ss_conf 23455540345654444332222223322110245666787489862797179999875765686999999879986888
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 l~egi~~ti~wyk~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1rkxa_ 321 LNTTLEYIVGWHKNWLSGTDMHEYSITEINNYMNTK 356 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 999999999999998748998998999999971589
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=26794.71 Aligned_cols=1 Identities=100% Similarity=1.766 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~e~DVlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~~~gg~s~~~g~~~~~~~~~~~~ 80 (356)
T d1jnra2 1 VYYPKKYELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTG 80 (356)
T ss_dssp CCCCSSCCCCCGGGSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSS
T ss_pred CCCCCCHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 97775033213556776687649899898889999999999978867697999967889997359877899974233323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~Ds~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1jnra2 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAA 160 (356)
T ss_dssp SBSCCCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 56766899999999998606876188999988741123556876097742013323322333100246640788999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~i~~~~~~~~l~~~~~~~~~v~~~~~~~~~~G~~~~i~Ak~VILATGG~~~~~~~~~~~~~~~~~~~~~~~tG 240 (356)
T d1jnra2 161 KMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTG 240 (356)
T ss_dssp HHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBS
T ss_pred HHHHCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86304517899999887653024665214568877404837984078799917875331357777644564447987577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 dG~~ma~~aGa~l~~~~~~q~~p~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~~~~~~g~rf~~~~~~~g~~a~~~~~~~ 320 (356)
T d1jnra2 241 SGYYMGLKAGAMLTQAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRF 320 (356)
T ss_dssp HHHHHHHHHTCCEESCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 09999998534524787247616645782432456567664004352121420017766557355655412328999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
+
T Consensus 321 i~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~~~~~ 356 (356)
T d1jnra2 321 ILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLS 356 (356)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 972899887788999999988776899998507999
|
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26794.68 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa~~l 80 (356)
T d1lbqa_ 1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 80 (356)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99659999878899986899999999758986446878899998656475687999999998189881089999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~~~~ 160 (356)
T d1lbqa_ 81 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 160 (356)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 98850233435772168873146320888999998579864378844234427888899999999988750102566426
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~~gdpY~~q~~~t~~~v~~~l~~~~~~~~~fQS 240 (356)
T d1lbqa_ 161 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVWQS 240 (356)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 44644312279999999999999767544567379995477653333327874689999999876430566645777640
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 r~g~~~WL~P~t~~~le~l~~g~k~v~v~p~gFvsD~lETL~Eidie~~~~~~gg~~f~~vp~lN~~p~fi~~La~lV~~ 320 (356)
T d1lbqa_ 241 QVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDKFKRCESLNGNQTFIEGMADLVKS 320 (356)
T ss_dssp CCSSSCBCSCBHHHHHHHHGGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGGEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 45677777875599999840489748998885242234449887777999971887499868998998999999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 ~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1lbqa_ 321 HLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 356 (356)
T ss_dssp HHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 865685567446644334768871118698616899
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=100.00 E-value=0 Score=26793.39 Aligned_cols=1 Identities=0% Similarity=0.270 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 f~~RG~mlD~aR~f~~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~i 80 (356)
T d1jaka1 1 YAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEI 80 (356)
T ss_dssp CSEEEEEEECSSSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98438678767998599999999999998299079999864887610016873465436756667788885289999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 v~ya~~rgI~viPEid~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~Hi 160 (356)
T d1jaka1 81 VRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHI 160 (356)
T ss_dssp HHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEEC
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999729868644777304679987584002568998644466778865566856789999999999987515507986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 GgDE~~~~~~~~~~~f~~~~~~~v~~~gk~~~~W~e~~~~~~~~~~vV~~W~~~~~~~~~~~~~~~~~~~G~~vI~s~~~ 240 (356)
T d1jaka1 161 GGDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGAEPVEGALVQYWGLDRTGDAEKAEVAEAARNGTGLILSPAD 240 (356)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEGGGGGSCCCTTCEEEECCCTTSCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 00244444078999999999999998599458740013678988867887730356763267999999809969977870
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~Yld~~~~~~~~~~~~w~~~~~~~~~y~~~P~~~~~~~~~~~ilG~e~~lWtE~i~~~~~~~~~~~PR~~AlAEr~Ws~ 320 (356)
T d1jaka1 241 RTYLDMKYTKDTPLGLSWAGYVEVQRSYDWDPAGYLPGAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSP 320 (356)
T ss_dssp TTCTTBCSSTTCSSSBCTTCCCCHHHHHSCCGGGSSTTCCGGGEEEEEEEECCTTCCSHHHHHHHHTTHHHHHHHHHHSC
T ss_pred HHEECCCCCCCCCCCCCCCCEEEHHHEEECCCCCCCCCCCHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 12020366789987753345122311450366567874521056478855054777998999988775599999998688
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~d~~~f~~RL~~~~~~l~~~Gv~y~r~p~~pw~ 356 (356)
T d1jaka1 321 ASTHDWDTYKVRLAAQAPYWEAAGIDFYRSPQVPWT 356 (356)
T ss_dssp GGGCCHHHHHHHHHTTHHHHHHHTCCCCCCTTSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 867999999999999999999779980679999999
|
| >d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=100.00 E-value=0 Score=26793.32 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~w~~~~~g~ee~~~~~l~spp~g~~l~s~~gd~~gf~~~dl~~p~~~~~~p~~~~~~~id~a~~~p~~ivr~G~~~~ 80 (356)
T d2ebsa2 1 WAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGNISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGH 80 (356)
T ss_dssp CCCCEEECCTTCBCCBEEEEECCSSSSSEEEEESSSBCBEESCTTSCCCBCCSSCCSEEEEEEECSSCTTCEEEEEECCC
T ss_pred CCCCCEECCCCEEHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHEEEHHHCCCEEEEEECCCC
T ss_conf 99854576578010000015758999810688864785597458887535268885640120104118956999967788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~StDgG~TW~~~~~~~~g~~~~~~~~g~ia~s~dg~~ivw~~~~~~~~~gv~~StD~G~TW~~~~~~~~~ 160 (356)
T d2ebsa2 81 EYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKA 160 (356)
T ss_dssp CBTTBCTTEEEESSSSSSEEECSCCCTTCSTTCCSCCEEEECTTSCCEEEECCCTTCCSCCEEESSTTSCCBCCEESCCS
T ss_pred CCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCEEECCCCCCC
T ss_conf 78888872799840522442787688886566446646999458993078731467886449970797113876777888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~i~~d~~~~~~~Ya~~~g~ly~StDgG~TW~~~~~~~~~~~~~~~~v~p~~~g~v~v~~~~~Gl~~StDgG~TWt~i 240 (356)
T d2ebsa2 161 QTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRV 240 (356)
T ss_dssp CCSCEEECSSSTTCEEEEETTEEEEESSTTSEEEECCBTCCCCCCCCCEECTTSTTCEEEEETTTEEEEESSTTSBCEEE
T ss_pred CCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEC
T ss_conf 73189996767965785046319994787654532256775454036888741699502112445259922776348981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~g~~~~~~~~GvyrS~D~G~TW~~Ind~~~~~g~~~~i~~Dp~~~grvYv 320 (356)
T d2ebsa2 241 GTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYL 320 (356)
T ss_dssp SSCEEEEEEEEEEC---------CCEEEEEEEESSTTSCSEEEEESSTTSSCEECCCTTSCTTCEEEEEECTTSTTCEEE
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEE
T ss_conf 47888764013333566454678875599999864798076999969997934995997777752289718976998999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
-
T Consensus 321 gT~GrGi~y~~~~~~~s~~~~~~~~~~~~~~~~~~~ 356 (356)
T d2ebsa2 321 GTNGRGIVYADLTNKKSNEEKSTAKCANGQKGTHCY 356 (356)
T ss_dssp EEBSSCEEEEECCC----CCCCEEEETTCCSSSCCC
T ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 968876799967788577887420127888887679
|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26792.09 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~yy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lTHi~yaFa~i~~~g~~~~~~~~~~~~~~~~~~~~~~lK 80 (356)
T d1goia2 1 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALK 80 (356)
T ss_dssp CCCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTSSEECCTTCCHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 98579999867745767624467766776720088404752994999879977996488258765267788999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~p~lKvllSiGGW~~s~~~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~ygfDGIDIDWE~P~~~~~~~~~~l~~el~ 160 (356)
T d1goia2 81 AHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIR 160 (356)
T ss_dssp GGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 87889869999837767788765543067885899999999999999999829982446420135444455336899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~w~~~tg~~spLy~~~~~p~~~~~ 240 (356)
T d1goia2 161 TLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNA 240 (356)
T ss_dssp HHHHHHHHHTTCTTSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTSSSCCCTTCSSBCTTSCCBCCG
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 98778888746545543058840577777752104799863215746787302367888887887745477889733212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~vsydd~~Si~~K~~y~~~~~LgGv~iW~l~~Dd~ 320 (356)
T d1goia2 241 LREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320 (356)
T ss_dssp GGGSSCCCCHHHHHHHCCSSBCCCHHHHHHHHHTSTTCCGGGEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECGGGSCT
T ss_pred CCCCCCCCCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 55444566765456566887522225899977986599843405882149999999999999957998999981488899
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
.
T Consensus 321 ~gsLl~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1goia2 321 NGDLLAALDRYFNAADYDDSQLDMGTGLRYTGVGPG 356 (356)
T ss_dssp TCHHHHHHHHHHHCTTCCCTTCCCCSCBCCCCCCTT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 967999987762687899653506788154178999
|
| >d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=26791.46 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~ad~~r~i~i~aNi~~~~e~~~a~~~gadGVGL~RtEflfl~~~~~~~~~~~~i~~p~~ee~~~~~~~~~~ 80 (356)
T d1vbga1 1 SGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLP 80 (356)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCCSEEEEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 93488999987537764899858999999999847997171777888741886304678987629999999999998788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~q~~~y~~i~~~~~g~pvtiRtlD~~~dk~lp~~~~~~~~~~l~~~~g~dk~~~~~~~~~~~E~NP~LG~RGiR~~l~~p 160 (356)
T d1vbga1 81 YQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYP 160 (356)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSCGGGGSCCSCHHHHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHCEEEEECHHHH
T ss_conf 78999999999748996699984278776676630567999999871998024554321334688432020455010211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~f~~ql~Ail~A~~~~~~~~~~~~~~IMiPmV~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iGiMiEvPsaal~~d~ 240 (356)
T d1vbga1 161 ELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADE 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 21357899999898744545756536550058763999999998887757888873066667435552357289997999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~DF~SIGTNDLtQytla~DRdn~~~~~~~y~~~~~~~~dp~~pav~~~i~~lI~~a~~~~k~~~~~i~vsiCGE~a 320 (356)
T d1vbga1 241 IAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG 320 (356)
T ss_dssp HTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG
T ss_pred HHHEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 96567899953038999999861310000026888630122587547789999999999999988507999699706434
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------6
Q 001706 633 -----------------------------------S 633 (1024)
Q Consensus 633 -----------------------------------~ 633 (1024)
-
T Consensus 321 sdp~~~~~L~~lGi~~iS~sp~~ip~~k~a~aq~~~ 356 (356)
T d1vbga1 321 GEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV 356 (356)
T ss_dssp GSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCC
T ss_conf 799999999987999899890778999999977509
|
| >d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FucI/AraA N-terminal and middle domains superfamily: FucI/AraA N-terminal and middle domains family: L-fucose isomerase, N-terminal and second domains domain: L-fucose isomerase, N-terminal and second domains species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26721.48 Aligned_cols=1 Identities=0% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 ~~~~~~pkiGirp~~Dgr~~~~re~le~~t~~~ak~~a~~l~~~l~~~~g~~ve~V~~d~~i~~~~eA~~~aekf~~~~v 80 (355)
T d1fuia2 1 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNV 80 (355)
T ss_dssp CCSCSCCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTE
T ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 98678980677853356504432038999999999999999987412689976999467516886999999999866598
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 d~~i~v~p~w~~~~~~~~~~~~~p~~vw~fn~~erpG~vgl~a~~aa~~q~Gip~~~iyg~~vqd~~d~~~p~dv~ekll 160 (355)
T d1fuia2 81 GLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL 160 (355)
T ss_dssp EEEEEEESSCCCHHHHSCCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEEECSSCCCTTCCCCCHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77999825546615545314799866882689999868999999999986598734760776668754226699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~faRAa~av~~Lrg~~ig~iG~~~mGm~~~~~d~~~l~~~fGi~ve~iDm~El~rr~e~~i~D~eEv~~Al~w~k~~~~~ 240 (355)
T d1fuia2 161 RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY 240 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCSTTCGGGSCCHHHHHHHHCCEEEEECTHHHHHHHHTTCSCHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999998658927887785677441257999999983995278759999999974689999999999999973302
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 g~d~n~~~~~~~~~~~~e~~e~~vkm~~~~rdlm~~n~~l~~~~~~ee~~g~~aia~gfqgqr~wtd~~p~~d~~ea~LN 320 (355)
T d1fuia2 241 GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILN 320 (355)
T ss_dssp CCCCSCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHTTCHHHHTCCCEEEEEECCTTTTTTTSCCSHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHC
T ss_conf 41357512477776759899999999999999985081034414157656888425531245202103655107899857
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
.
T Consensus 321 s~~dwnG~rep~~~AtE~D~~~altMl~~~lLTgt 355 (355)
T d1fuia2 321 SSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGT 355 (355)
T ss_dssp SSEETTEECCCCCEEETTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 84444787686336633340108999999875089
|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Gentisate 1,2-dioxygenase-like domain: Gentisate 1,2-dioxygenase species: Silicibacter pomeroyi [TaxId: 89184]
Probab=100.00 E-value=0 Score=26721.25 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~plw~~~~~~~p~~p~~~~~p~~w~~~~~~~~l~~~~~~~~~~~~~rr~~~l~np~~~~~~~ 80 (355)
T d3bu7a1 1 RDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVLRAIDLVRPEDAGRRVVYLRNPQRKDVSA 80 (355)
T ss_dssp CCCHHHHHHHHHHHHTTCCCGGGSCGGGSCSSCCCSSCCCEECHHHHHHHHHHHHHHSCSSCSSCCCEECCCGGGGGGTC
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCC
T ss_conf 98578999999998768945110046778999998862216009999999998741168311770599960798778777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~t~~l~~~~q~l~PGe~~~~HrH~~~~~~~vi~G~g~~t~v~ge~~~~~~GD~~~~P~~~~H~h~n~~~~~~~~~l~~~D 160 (355)
T d3bu7a1 81 ACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 160 (355)
T ss_dssp SBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCCHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECC
T ss_conf 67204532076689983730115442048999898079989998877667999995899528622478997489998125
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~Pl~~~l~~~f~e~~p~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~~~sp~~~ypw~~~~~al~~~~~~~~~~~~~g~~ 240 (355)
T d3bu7a1 161 IPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI 240 (355)
T ss_dssp HHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEE
T ss_pred HHHHHHCCCEECCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
T ss_conf 67876326300125840014555787602455344565443456776668533366442167789898547888778559
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 l~y~nP~tg~~~~~ti~~~~~~l~pG~~~~~hrH~~~~v~~v~~G~g~~~i~g~~~~~~~GDv~~vP~~~~h~~~N~s~~ 320 (355)
T d3bu7a1 241 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQER 320 (355)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSS
T ss_pred EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEEECCCEEEECCCCCEEEECCCCC
T ss_conf 99646655577752016789997899705883735707999997849999999998862899899499984785558998
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
.
T Consensus 321 e~~~Lf~~~D~P~~~~Lg~~~e~~~~~~~~~q~~~ 355 (355)
T d3bu7a1 321 DDACLFSFNDFPVMEKLGFWAEQALEDNGGHQIVA 355 (355)
T ss_dssp CCEEEEEEESHHHHHHTTCCCEEECCSTTTCCCCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 86899995475999876167775411047976569
|
| >d1luca_ c.1.16.1 (A:) Bacterial luciferase alpha chain, LuxA {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Bacterial luciferase (alkanal monooxygenase) domain: Bacterial luciferase alpha chain, LuxA species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=0 Score=26719.51 Aligned_cols=1 Identities=0% Similarity=0.901 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
+
T Consensus 1 M~fg~f~~~~~~~~~~~~~~~~~~~~~a~~ae~~Gf~~~~~~ehh~~~~~~~~~p~~~~a~~a~~T~~I~lgt~v~~~~~ 80 (355)
T d1luca_ 1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPT 80 (355)
T ss_dssp CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEECCCCSBTTBCCSCHHHHHHHHHHHCSSCEEEEEEEEGGG
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 91357668879999799999999999999999879989996235788877767999999999996791068542367887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~P~~~A~~~atLd~ls~GR~~lGig~G~~~~~~~~~G~~~~~~~~~~~E~~~il~~l~~~~~~~~~G~~~~~~~~~~~P 160 (355)
T d1luca_ 81 AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNP 160 (355)
T ss_dssp SCHHHHHHHHHHHHHHHTSCEEEEEECCCCHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHSEEEEESSSCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 65999999998887626997146542034300343210121001101578888887520243322222344444322366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~p~q~~~~Pi~~a~~sp~~~~~Aa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~v~~~~e~A~ 240 (355)
T d1luca_ 161 SAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAK 240 (355)
T ss_dssp CCSSTTSSCEEECCCSHHHHHHHHHTTCCBEECSSSCHHHHHHHHHHHHHHHHHTTCCGGGCCCEEEEECEECSSHHHHH
T ss_pred CCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 43567888620120322789999985067644354203331127899999887622454333210010011467799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~v~~~l~~~~e~~Gv 320 (355)
T d1luca_ 241 DICRNFLGHWYDSYVNATKIFDDSDQTKGYDFNKGQWRDFVLKGHKDTNRRIDYSYEINPVGTPEECIAIIQQDIDATGI 320 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----------------------------CCSGGGGGSSEESHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCC
T ss_conf 99999999999986421013576132125421102344555403501678887427741564899999999999997599
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
.
T Consensus 321 d~~~l~~~~~~~~~~~~~sl~lfae~V~P~lr~~~ 355 (355)
T d1luca_ 321 DNICCGFEANGSEEEIIASMKLFQSDVMPYLKEKQ 355 (355)
T ss_dssp CEEEEECGGGCSHHHHHHHHHHHHHHTGGGCCCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 97999788999999999999999984101124899
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26718.34 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
-
T Consensus 1 ~~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80 (355)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCEEEEECCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99879995894045337759988962175859999999999989999998823369799999999999998648987648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl 160 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99897025643457626999841446778765038999999999999999998865221124567763211365443132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 240 (355)
T d2b1pa1 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_dssp CCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ECHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 01023211466655332214655558133147777877433356625789865989988897788999999720589879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~ 320 (355)
T d2b1pa1 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320 (355)
T ss_dssp HHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 99876566777764175435666421264333543210133379999999999876994579089999669420878881
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (355)
T d2b1pa1 321 AEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355 (355)
T ss_dssp HHHTCCCC-------CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
T ss_conf 00458999877702332415999999999998629
|
| >d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Archaeosine tRNA-guanine transglycosylase, N-terminal domain species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=26717.19 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~m~~F~i~~~d~~AR~G~l~~~~g~i~TP~fmpv~t~~~v~~~p~~l~~~g~~iil~NtYhl~~~p~~~~~~~~gGLh~F 80 (355)
T d1iq8a1 1 KMLKFEIKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQMVVEPKELEKMGFEIIITNSYIIYKDEELRRKALELGIHRM 80 (355)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEESEEEEBCCSSSCSSCHHHHHHTTCCEEEEEHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCEEEEEECCEEEECCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCCHHHH
T ss_conf 95689998611772248999699666089155654587401489999983899892111306789873443124770443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~w~~~ilTDSGgfQv~sl~~~~~~~e~~i~~q~~lgsDI~m~lD~~~~~~~~~~~~~~s~~rt~~~~~~~~~~~~~~~~ 160 (355)
T d1iq8a1 81 LDYNGIIEVDSGSFQLMKYGSIEVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAVKELEITLSRAREAEEIKEIPMN 160 (355)
T ss_dssp HTCCSEEEEECSTTHHHHSSCCSSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHCCSCBB
T ss_pred HCCCCCEECCCCCCEEECCCHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02789623055663121120011244566201204576179840346787777999999999999988887653205642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 givqGG~~~dLR~~sa~~l~~~~~dG~aiGG~~~~~~~~~~~~~~~~i~~~~~~Lp~~kPrylmGvG~P~di~~~v~~Gi 240 (355)
T d1iq8a1 161 ATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPDRPVHLFGAGHPIVFALAVAMGV 240 (355)
T ss_dssp CCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSCTTSCEEETTCCCGGGHHHHHHTTC
T ss_pred CEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCC
T ss_conf 00012257317699986654178103201166765204789999998864101486336444137887567999998558
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 D~FD~~~p~r~ar~g~~~t~~g~~~l~~~d~~pC~C~~C~~~srayl~HL~~~~e~~LltiHNl~~~~~l~~~iR~aI~~ 320 (355)
T d1iq8a1 241 DLFDSASYALYAKDDRYMTPEGTKRLDELDYFPCSCPVCSKYTPQELREMPKEERTRLLALHNLWVIKEEIKRVKQAIKE 320 (355)
T ss_dssp CEEEESHHHHHHHTTEEEETTEEEEGGGCSSCCCCSTTTTTCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96520588887640332157885235411013457852140589999976346488999999999999999999999985
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
.
T Consensus 321 g~f~~~~e~~~~~~p~~~~~~~~l~~~~~~~~~~~ 355 (355)
T d1iq8a1 321 GELWRLVDERARSHPKLYSAYKRLLEHYTFLEEFE 355 (355)
T ss_dssp TCHHHHHHHHHTTCHHHHHHHHHHHHCHHHHHHHS
T ss_pred CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999869999999999998888875019
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26717.24 Aligned_cols=1 Identities=100% Similarity=1.068 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~ 80 (355)
T d1nexb2 1 FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 80 (355)
T ss_dssp CCCEEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEE
T ss_pred CCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCC
T ss_conf 98875888983788699999889999999189909999899993999997899988999986999999996452443211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEEC
T ss_conf 11111111110011111111111112322045543888689998567730012465200010000011234012101100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 240 (355)
T d1nexb2 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC
T ss_conf 22210000256334421144204443013110001100012332111111210021012456368763012211111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~ 320 (355)
T d1nexb2 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320 (355)
T ss_dssp CCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCT
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEE
T ss_conf 11111111123210033320111111111111110001246882299998499989999809979999999997988884
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
+
T Consensus 321 ~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~dfs 355 (355)
T d1nexb2 321 LKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDFS 355 (355)
T ss_dssp TTTCSEEEEEEEETTEEEEEEESSSCEEEEEEECC
T ss_pred CCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECC
T ss_conf 58999899999839919999989890999999588
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26717.08 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRg 80 (355)
T d1jbqa_ 1 WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRI 80 (355)
T ss_dssp CCCTTSCCCCCCCTTSCGGGCCSCCCCCCCCCSEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 98899998865548986888997666776556410318775489973788643277599977999977889755979999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 a~~~i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~ 160 (355)
T d1jbqa_ 81 SLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPES 160 (355)
T ss_dssp HHHHHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
T ss_conf 99999999972886667669972555400488999986257708996123168899999844976999216643101555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 161 HVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 34699999973356513444576532001005650034441389998568622587037788888752487536986325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~gs~~~~~~~~~~~~~~~~~i~gi~~~~~~~~~~~~~~~~~~~v~D~ea~~~~~~L~~~eGi~vepSsaa~laa~l~~~~ 320 (355)
T d1jbqa_ 241 EGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ 320 (355)
T ss_dssp TTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
T ss_conf 67720133333322334522355456620111100120220358989999999999998095982899999999999977
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
=
T Consensus 321 ~~~~g~~VVvvlcd~G~kY~s~~~~d~~~~~~~~~ 355 (355)
T d1jbqa_ 321 ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL 355 (355)
T ss_dssp GCCTTCEEEEEECBBGGGGTTTTTCHHHHHHTTCC
T ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 60896989999777976235642689999877899
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| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=26716.30 Aligned_cols=1 Identities=0% Similarity=-1.123 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 6-------------------------------------------------------------------------------
Q 001706 632 I------------------------------------------------------------------------------- 632 (1024)
Q Consensus 632 ~------------------------------------------------------------------------------- 632 (1024)
.
T Consensus 1 ~~p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 99717476589999999982664777671999999999499999899998569948999999996777642015899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058740473069963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 240 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 240 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
T ss_conf 69993899989998347873799962433300011061021538997388746998299996589907998445784412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001706 633 -------------------------------------------------------------------------------- 632 (1024)
Q Consensus 633 -------------------------------------------------------------------------------- 632 (1024)
T Consensus 241 ~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~ 320 (355)
T d2bbkh_ 241 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 320 (355)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET
T ss_pred EEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 68543303510899980799767887406871265179975999867888498996689987799992899969999978
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------6
Q 001706 633 ----------------------------------S 633 (1024)
Q Consensus 633 ----------------------------------~ 633 (1024)
.
T Consensus 321 ~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp TTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCC
T ss_conf 99989999999998999992869796589969999
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