Citrus Sinensis ID: 001714

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020-
Protein Sequence
MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKNAGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMYMPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHNANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTNSCSVPLGDKPSVNVCELKRNAEEGDCDNKLTVTKKAKTENEPVINC
Secondary Structure (PSIPRED)
cHHHHHccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHcccccccccccEEEEEEccccccccccccccccEEEEEEEEccccccccccccEEccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEccccccccEEEEEEcHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHccccccHHEEEEEccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHccccccccccccHHHcccHHHHHHHHccccccEEEEccEEEEEEcccccEEEEEEccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccccccHccEEEEEEccccccccEEEEEEcccHHHHEcccccccccccEEEEEcccccccccccccccccEEEEEEEEcccccccccccccEcccccccccccccccccccccccEEEEEEEEEEEcccEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccccEEEEEEcHHHHHHHHHHccccEEEEEcccccccccEEEEEEEEEccccccEEEEEEEEccccHHHHHHHHHHHHHHHHcccccccccEEEEcccHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHccccccccEEEcccEEEEEEcccccEEEEEEccccccccccccHHHcccHHHHHEEHHHHHcccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccEcccccccccccccccHHHcccccEEEEEcccccccccccccccccccccccccccccHHHcccccccEEccccccccccHHEEEccccccccccccccEEEccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccEccccccccccccccccccccccEcccccccccccccccccccccccccEEEcccccccccccccccccEHHEHcccccccccccEEEEEEcccccccEEcc
Coil and Loop (DISEMBL)
marwdeilslpvqnpptlefaSVDLVWSkvegwrdkldrvalipfarvddfvrgessnkdcptrfhvearrrrststsckpkvdGILEYILYWCsfgpddhrkggivrpsrttyvpkkknagrpntkrgctcHFIVKRLIAEPSVALIIYndekhvdknglpchgpqdkkaagtramfapYISEDLRLRVLSLLHVGVSVETIMQRHNESverqggpcnrddllthRYVRRQERSIrrstyeldlddaVSINMWVESHQSYVFfyedfseydpftlgiQTEWQLQQMIRFGnrsllasdsrfgtnklkyplhslivfnsdkkaipVAWViapsfssadTHRWMRALYNRvrtkdptwnlagfivddpsadvhtirDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVavddickghgTIALFENCmedfmdgsdfmdYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLlnekdsgvyqrtdwlvdklgtkvhsyfwldeytgkddfarYWKDEWVSGLTCWRKALkildsdvviegrcgkvtdqldgnkvyvvrnpgsqfgicncswAEMGYLCEHLLKVIIVCRkkgsvkpsiSLFQYNKALMDMlhctphdsliRDHAISLAVSIQKQLnasvdfessqiSVASVEKQIVEtneqqtvgtfhadqdrelvneghcvnddvssqkgrnrgeelvasggtanELAGGLINQLVSanslcggtteEEISFAktdveqspiyistpglvsvdelassggfskneqralvsdaeisgythskdaavtdqneaeegisdkdchqdldvepftidmppptmefleqctvspqngissldpqlpvlsnkadadshsdkasrpmympveskavgvsetagivgdnenevgnakggaakspcstdialvsdgscddaannsntchnangvqsvmpsessrnhmsipsdtenqQAVGVVSqktnscsvplgdkpsvnvcelkrnaeegdcdnkltvtkkaktenepvinc
Flexible Loop (DISEMBL)
MARWDEILslpvqnpptlefASVDLVWSKVEGwrdkldrvalipfarvddfvrgessnkdcptrfhvearrrrststsckpkvdgILEYILYWCSFGPddhrkggivrpsrttyvpkkknagrpntkrgcTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRhnesverqggpcnrddllthryvrrqersirrstyeldldDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIapsfssadthRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKildsdvviegrcgkvtdqldgnkvYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVnddvssqkgrnrGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMYMPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHNANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTnscsvplgdkpsvNVCELKrnaeegdcdnkltvtkkaktenepvinc
Low Complexity Region (SEG)
MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKNAGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMYMPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHNANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTNSCSVPLGDKPSVNVCELKRNAEEGDCDNKLTVTKKAKTENEPVINC
Disordered region (IsUnstruct)
******ILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVR***************************PKVDGILEYILYWCSFGPDDHRKGGIV*******************KRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCH*******AGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQ***************DDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDF*****************************************************************ELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSV************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
****DEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPT***********************LEYILYWCSFGPDD*****************************CTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLN*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************VINC
Disordered Region (DISEMBL)
MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTRFH*************KPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYV**********TKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLS************SRPMYMPVESKAVGVSETAGIVGDNENEVGN**********STDIALVSDGSCDDAANNSNTCHNANGVQ**********************************SVPLGDKPSVNVCELKRNAEEGDCDNKLTVTKKAKTENEPVINC
Disordered Region (DISPRO)
*ARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRT*******N**RPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFE****************************************************************************A**********EISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAE*********************ISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKA************************************************PCSTDIALVSDGSCDDAANNS********V***************************V*****SCSVPLGDKPSVNVCELKRNAEEGDCDNKLTVTKKAKTENEPVINC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKNAGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMYMPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHNANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTNSCSVPLGDKPSVNVCELKRNAEEGDCDNKLTVTKKAKTENEPVINC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1021
225449780	965	PREDICTED: uncharacterized protein LOC10	0.940	0.994	0.649	0.0
296085354	962	unnamed protein product [Vitis vinifera]	0.868	0.922	0.682	0.0
356519868	893	PREDICTED: uncharacterized protein LOC10	0.859	0.983	0.655	0.0
255574517	681	conserved hypothetical protein [Ricinus	0.664	0.995	0.794	0.0
449435532	855	PREDICTED: uncharacterized protein LOC10	0.830	0.991	0.634	0.0
449488530	855	PREDICTED: uncharacterized LOC101211068	0.830	0.991	0.634	0.0
357474707	797	hypothetical protein MTR_4g080580 [Medic	0.733	0.939	0.666	0.0
79474118	778	zinc ion binding protein [Arabidopsis th	0.719	0.944	0.664	0.0
297800880	776	zinc ion binding protein [Arabidopsis ly	0.717	0.944	0.665	0.0
224063649	873	predicted protein [Populus trichocarpa]	0.605	0.707	0.739	0.0

>gi|225449780|ref|XP_002271166.1| PREDICTED: uncharacterized protein LOC100264354 [Vitis vinifera]

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/981 (64%), Positives = 744/981 (75%), Gaps = 21/981 (2%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEILSLPVQNPPTLEF+S ++VWSKVEGWRD +DRVALIPFARVDDFVRGES+NKD
Sbjct: 1   MARWDEILSLPVQNPPTLEFSSAEIVWSKVEGWRDNIDRVALIPFARVDDFVRGESANKD 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR      KPKVDGILEYILYWCSFGPDDHRKGGIVRPSR+TYVPKKK+
Sbjct: 61  CPTRFHVEARRRRPPEMPYKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRSTYVPKKKS 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPSVALIIYN +KHVDK GLPCHGPQDKKAAGTRAMFAP
Sbjct: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNQDKHVDKKGLPCHGPQDKKAAGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRVLSLLHVGVSVETIMQRH+ESV+RQGGPCNRDDLLTHRYVRRQERSIRRST
Sbjct: 181 YISEDLRLRVLSLLHVGVSVETIMQRHSESVKRQGGPCNRDDLLTHRYVRRQERSIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DDA+SI MWVESHQS+VFFY+DFS+ +PFTLGIQTEWQLQQMIRFGNRSL+ASDS
Sbjct: 241 YELDTDDAISIRMWVESHQSHVFFYQDFSDSEPFTLGIQTEWQLQQMIRFGNRSLVASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFG+NKLKYP+HSLIVFNSDKKAIPVAW+I+P FSS D H+WMRALYNRV TKDPTW LA
Sbjct: 301 RFGSNKLKYPIHSLIVFNSDKKAIPVAWIISPIFSSGDAHKWMRALYNRVHTKDPTWKLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP ADV TIR+VFQCSVL+ FWRVRHAWHKNLVK+CS I MRAEI R LG AV  
Sbjct: 361 GFIVDDPLADVLTIREVFQCSVLICFWRVRHAWHKNLVKKCSGIEMRAEISRQLGQAVSK 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           +C+GH T+ +FE+ MED +D SDFMDYFKA+WYPR+G WI+ L+TLPLASQET AAMEFY
Sbjct: 421 VCRGHATVGVFEDIMEDLVDSSDFMDYFKAIWYPRMGVWISALQTLPLASQETCAAMEFY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           HNQLK+RLLNEK+  VYQR DWL+DKLGTKVHSYFWLDEY+GKDDF+RYW+DEWVSGLT 
Sbjct: 481 HNQLKLRLLNEKEPSVYQRADWLIDKLGTKVHSYFWLDEYSGKDDFSRYWRDEWVSGLTS 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WRKALKI DSDVV+E R  KV DQ D ++ ++V NPGS++ IC+C WAEMG LCEH+ KV
Sbjct: 541 WRKALKIPDSDVVLERRFAKVIDQQDQDRAHIVWNPGSEYAICDCGWAEMGNLCEHVFKV 600

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
           I VCR  GS   SISLFQY +AL++ML+C P+DSLIRDHA+SLAV +Q QLN  VD ESS
Sbjct: 601 ISVCRNNGSSMSSISLFQYKQALINMLNCPPNDSLIRDHAVSLAVHVQIQLNTLVDPESS 660

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGT 720
           Q         IV+ N+QQ  G   ADQ R++V E +C  ++VSS +           GG 
Sbjct: 661 QT--------IVDVNKQQHNGVASADQQRDIVQESNCPKENVSSSRESGDSVGHEGPGGI 712

Query: 721 ANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSK 780
              L G LI+++ S    CG T  +EI  +  DV+ S I     GL S+D L SS  FS+
Sbjct: 713 GGVLGGDLIDKVASGEGYCGETAGDEIPCSDMDVDPSSICNPPSGLFSLDGLVSSDIFSE 772

Query: 781 NEQRALVSDAEISGYTH--SKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEF 838
           N +R LV DAE+    +  S+  A T +N  E+  SD      +D+EP    +    +E 
Sbjct: 773 NGERCLV-DAELDMPENHPSEGDAFTIRNGFEDDDSDTPLLNMMDMEPH---IHSQMVES 828

Query: 839 LEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMY---MPVESKAVGVSETAGIV 895
            E+C +  QNG  S +    ++SN  D +    +   P      PVE   V + ET+G+ 
Sbjct: 829 PEECNMIHQNGDCSENAGPLIVSNTVDGNPQFSETFPPSISKPSPVEVHPVDMVETSGVT 888

Query: 896 GDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHNANGVQSVMPSESSRNHM 955
            D E      +   +K+   TD A+  +G  D  AN+++      G +     ESS+N++
Sbjct: 889 EDKERTDLEIERSLSKNLPLTDNAVPLNGVQDILANDADKV----GSKISECPESSQNYL 944

Query: 956 SIPSDTENQQAVGVVSQKTNS 976
           S   D E +Q    V+ +T S
Sbjct: 945 SKSGDGEQKQETLPVASETVS 965

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085354|emb|CBI29086.3| unnamed protein product [Vitis vinifera]

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/904 (68%), Positives = 709/904 (78%), Gaps = 17/904 (1%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEILSLPVQNPPTLEF+S ++VWSKVEGWRD +DRVALIPFARVDDFVRGES+NKD
Sbjct: 55  MARWDEILSLPVQNPPTLEFSSAEIVWSKVEGWRDNIDRVALIPFARVDDFVRGESANKD 114

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR      KPKVDGILEYILYWCSFGPDDHRKGGIVRPSR+TYVPKKK+
Sbjct: 115 CPTRFHVEARRRRPPEMPYKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRSTYVPKKKS 174

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPSVALIIYN +KHVDK GLPCHGPQDKKAAGTRAMFAP
Sbjct: 175 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNQDKHVDKKGLPCHGPQDKKAAGTRAMFAP 234

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRVLSLLHVGVSVETIMQRH+ESV+RQGGPCNRDDLLTHRYVRRQERSIRRST
Sbjct: 235 YISEDLRLRVLSLLHVGVSVETIMQRHSESVKRQGGPCNRDDLLTHRYVRRQERSIRRST 294

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DDA+SI MWVESHQS+VFFY+DFS+ +PFTLGIQTEWQLQQMIRFGNRSL+ASDS
Sbjct: 295 YELDTDDAISIRMWVESHQSHVFFYQDFSDSEPFTLGIQTEWQLQQMIRFGNRSLVASDS 354

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFG+NKLKYP+HSLIVFNSDKKAIPVAW+I+P FSS D H+WMRALYNRV TKDPTW LA
Sbjct: 355 RFGSNKLKYPIHSLIVFNSDKKAIPVAWIISPIFSSGDAHKWMRALYNRVHTKDPTWKLA 414

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP ADV TIR+VFQCSVL+ FWRVRHAWHKNLVK+CS I MRAEI R LG AV  
Sbjct: 415 GFIVDDPLADVLTIREVFQCSVLICFWRVRHAWHKNLVKKCSGIEMRAEISRQLGQAVSK 474

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           +C+GH T+ +FE+ MED +D SDFMDYFKA+WYPR+G WI+ L+TLPLASQET AAMEFY
Sbjct: 475 VCRGHATVGVFEDIMEDLVDSSDFMDYFKAIWYPRMGVWISALQTLPLASQETCAAMEFY 534

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           HNQLK+RLLNEK+  VYQR DWL+DKLGTKVHSYFWLDEY+GKDDF+RYW+DEWVSGLT 
Sbjct: 535 HNQLKLRLLNEKEPSVYQRADWLIDKLGTKVHSYFWLDEYSGKDDFSRYWRDEWVSGLTS 594

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WRKALKI DSDVV+E R  KV DQ D ++ ++V NPGS++ IC+C WAEMG LCEH+ KV
Sbjct: 595 WRKALKIPDSDVVLERRFAKVIDQQDQDRAHIVWNPGSEYAICDCGWAEMGNLCEHVFKV 654

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
           I VCR  GS   SISLFQY +AL++ML+C P+DSLIRDHA+SLAV +Q QLN  VD ESS
Sbjct: 655 ISVCRNNGSSMSSISLFQYKQALINMLNCPPNDSLIRDHAVSLAVHVQIQLNTLVDPESS 714

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGT 720
           Q         IV+ N+QQ  G   ADQ R++V E +C  ++VSS +           GG 
Sbjct: 715 QT--------IVDVNKQQHNGVASADQQRDIVQESNCPKENVSSSRESGDSVGHEGPGGI 766

Query: 721 ANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSK 780
              L G LI+++ S    CG T  +EI  +  DV+ S I     GL S+D L SS  FS+
Sbjct: 767 GGVLGGDLIDKVASGEGYCGETAGDEIPCSDMDVDPSSICNPPSGLFSLDGLVSSDIFSE 826

Query: 781 NEQRALVSDAEISGYTH--SKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEF 838
           N +R LV DAE+    +  S+  A T +N  E+  SD      +D+EP    +    +E 
Sbjct: 827 NGERCLV-DAELDMPENHPSEGDAFTIRNGFEDDDSDTPLLNMMDMEPH---IHSQMVES 882

Query: 839 LEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMY---MPVESKAVGVSETAGIV 895
            E+C +  QNG  S +    ++SN  D +    +   P      PVE   V + ET+G+ 
Sbjct: 883 PEECNMIHQNGDCSENAGPLIVSNTVDGNPQFSETFPPSISKPSPVEVHPVDMVETSGVT 942

Query: 896 GDNE 899
            D E
Sbjct: 943 EDKE 946

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519868|ref|XP_003528591.1| PREDICTED: uncharacterized protein LOC100819719 [Glycine max]

 Score = 1199 bits (3102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/906 (65%), Positives = 697/906 (76%), Gaps = 28/906 (3%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWD ILSLPVQNPPTLE +S +LVWSKVEGW DKLDRVALIP+ARVDDFVRGES+NK+
Sbjct: 1   MARWDAILSLPVQNPPTLEISSAELVWSKVEGWHDKLDRVALIPYARVDDFVRGESNNKE 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRRS ST  K KVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN
Sbjct: 61  CPTRFHVEARRRRSPSTPFKQKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGC CHFIVKRLIAEPSVALIIYND+KHVDK GLPCHGPQDKKAAGTRAMFAP
Sbjct: 121 AGRPNTKRGCICHFIVKRLIAEPSVALIIYNDDKHVDKKGLPCHGPQDKKAAGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRVLSLL+VGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQER+IRRST
Sbjct: 181 YISEDLRLRVLSLLYVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERAIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DDAVSI+MWVESHQ+ VFFYEDFS+ +PFTLGIQTEWQLQQMIRFGN  +LASDS
Sbjct: 241 YELDDDDAVSISMWVESHQNLVFFYEDFSDSNPFTLGIQTEWQLQQMIRFGNSGMLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTNKL+YP+HSL+VFN DKKAIPVAW+IAP FSS D HRWMRALYNRV TKDPTW LA
Sbjct: 301 RFGTNKLQYPIHSLLVFNLDKKAIPVAWIIAPKFSSLDAHRWMRALYNRVHTKDPTWKLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDPS DV  IRDVFQC+V++SFWR+RH WHKN+VK C E  M+ +I R LG  VD+
Sbjct: 361 GFIVDDPSYDVLAIRDVFQCTVMISFWRIRHLWHKNIVK-CLETDMQIKISRRLGWIVDN 419

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           IC+  G+++LFE  MEDF+D S FMDYFKA W+PRIG WI  L+TLPLASQE+ AAMEFY
Sbjct: 420 ICRHQGSMSLFEEFMEDFIDESKFMDYFKATWHPRIGTWINALQTLPLASQESCAAMEFY 479

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           HNQLK+RLLNEKD  VYQR DWLVDKLGTKVHSYFWLDEY+ KDDFARYWK+EW+SGLT 
Sbjct: 480 HNQLKIRLLNEKDICVYQRADWLVDKLGTKVHSYFWLDEYSEKDDFARYWKNEWMSGLTS 539

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WRKALKI D+DV++E  C KVTDQ   +K +VV N GS   ICNCSWA+ G LCEH+LKV
Sbjct: 540 WRKALKIPDTDVIMEDGCAKVTDQ---DKAFVVWNTGSMLSICNCSWAQDGNLCEHILKV 596

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
           + +CRK+GS+ PS++LFQY++AL +MLHC P DS IRDHA+SLAVS+QKQLN  +D ES 
Sbjct: 597 LSICRKRGSILPSVTLFQYHQALNNMLHCPPFDSFIRDHAVSLAVSVQKQLNTLLDKESD 656

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQ----KGRNRGEELVA 716
           Q  +   EK+I+    Q+       ++D++LV++   +ND +S      + RN   +   
Sbjct: 657 QTVMDPNEKRIIIDIPQEWFKVVSTNRDQDLVSKKRVINDILSEDDNGCEDRNNSNDAPG 716

Query: 717 SGGTANELAGG-LINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASS 775
                N++A   +++  ++ N     +  E+   A  DV+ S   ++ PGL  VD+  S 
Sbjct: 717 CASAMNDIADQEVVDHGIARNGKLFESAGEDSLPADMDVDPSSTCVNPPGLDPVDDTVSG 776

Query: 776 GGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDK---DCHQDLDVEPFTIDMP 832
             F +N++R L   A I     + +      ++ EE ISDK   DC  D       +D P
Sbjct: 777 DAFQENKERGL---ATIGNEISASENGALPNDKIEENISDKGGRDCAMD-------VDTP 826

Query: 833 PPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMYMPVESKAVGVSETA 892
             T E ++ C +  QNG++ + P+  V+S   DADSH    S     P E  AV   E +
Sbjct: 827 SSTTEDVKHCEIH-QNGVNEV-PR--VISCTKDADSHLSPPS--TVTPAEPLAVDTGENS 880

Query: 893 GIVGDN 898
           G + ++
Sbjct: 881 GTIKED 886

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574517|ref|XP_002528170.1| conserved hypothetical protein [Ricinus communis] gi|223532427|gb|EEF34221.1| conserved hypothetical protein [Ricinus communis]

 Score = 1155 bits (2988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/678 (79%), Positives = 593/678 (87%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEILSLPVQNPPTLEF++ DLVWSK+EGWRD +DR+ALIPF RV DFVRGES+NKD
Sbjct: 1   MARWDEILSLPVQNPPTLEFSANDLVWSKIEGWRDNIDRLALIPFDRVADFVRGESANKD 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR T  S K KVDGILEYILYWCSFGPDDHRKGGIVRPSRTT VPKKKN
Sbjct: 61  CPTRFHVEARRRRPTEASYKQKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTNVPKKKN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPSVALIIYN +KHVDK GLPCHGPQDKKA GTRAM+AP
Sbjct: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNQDKHVDKKGLPCHGPQDKKAEGTRAMYAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YIS++LRLRVLSLL+VGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST
Sbjct: 181 YISDELRLRVLSLLYVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DDAVSI+MWVESH ++VFFYEDF+  DPFTLGIQTEWQLQQMI+FGNR LLASDS
Sbjct: 241 YELDTDDAVSISMWVESHHNHVFFYEDFNNSDPFTLGIQTEWQLQQMIQFGNRGLLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTNKLKYP+HSL+VFNS+KK IPVAW+I P F++AD H+WMRALYNRVRTKDPTW LA
Sbjct: 301 RFGTNKLKYPVHSLVVFNSEKKVIPVAWIITPRFATADAHKWMRALYNRVRTKDPTWKLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP  D+HTIRDVF+CSVL+SFWRVRHAWHKNLVKRCSE  MR ++ R LG  VDD
Sbjct: 361 GFIVDDPLTDIHTIRDVFECSVLISFWRVRHAWHKNLVKRCSETEMRVQMSRRLGDVVDD 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           I  GHGT+ LFE  +EDF+DGSDFMDYFKAVWYPRIG W   LK LPLAS ET AAME Y
Sbjct: 421 ISSGHGTLDLFEIFIEDFVDGSDFMDYFKAVWYPRIGIWTAALKALPLASLETCAAMELY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           HNQLKVRLL+EKD GVYQR DWLVDKLGTKVHSYFWLDEY+ KDDF RYWKDEW +GLT 
Sbjct: 481 HNQLKVRLLSEKDPGVYQRADWLVDKLGTKVHSYFWLDEYSEKDDFVRYWKDEWATGLTA 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WR+AL + D DVV+EGRC KV DQLD +KV+VV NPGS F IC+CS AEMG LCEH++KV
Sbjct: 541 WRRALNVPDVDVVMEGRCAKVYDQLDRDKVHVVWNPGSDFAICDCSLAEMGNLCEHVIKV 600

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
             +C +KG  +PSISL QYN AL+DML+C PHDSLI DHA+SLAV++ K+L+A VD  SS
Sbjct: 601 RRICHEKGYRRPSISLLQYNHALIDMLYCPPHDSLIHDHAVSLAVAVNKELDALVDLGSS 660

Query: 661 QISVASVEKQIVETNEQQ 678
             +V  + KQ  ET   Q
Sbjct: 661 HFTVDPILKQAAETRAVQ 678

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435532|ref|XP_004135549.1| PREDICTED: uncharacterized protein LOC101211068 [Cucumis sativus]

 Score = 1139 bits (2945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/868 (63%), Positives = 664/868 (76%), Gaps = 20/868 (2%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEI SLPVQNPPTLEF+S DLVWSKVEGWRD +DRVA+IPFARV DFVRGESSNK+
Sbjct: 1   MARWDEIFSLPVQNPPTLEFSSADLVWSKVEGWRDNMDRVAVIPFARVGDFVRGESSNKE 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR+     K KVDG+LEYILYWCSFGPDDHRKGG+ RPSR+TYVPKKKN
Sbjct: 61  CPTRFHVEARRRRALKAPFKAKVDGVLEYILYWCSFGPDDHRKGGVRRPSRSTYVPKKKN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPS+ALIIYN++KHVDK GLPCHGPQDKKA GTRAMFAP
Sbjct: 121 AGRPNTKRGCTCHFIVKRLIAEPSIALIIYNEDKHVDKKGLPCHGPQDKKAEGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLR+LSLL+VGVSVETIMQRHNESVE+QGGPCNRDDLLTHRYVR QERSIRRST
Sbjct: 181 YISEDLRLRILSLLYVGVSVETIMQRHNESVEKQGGPCNRDDLLTHRYVRIQERSIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           +ELD DDAVS+++WVE HQS VFFYEDF++ D FTLGIQTEWQLQQMIRFGNR LLASDS
Sbjct: 241 HELDEDDAVSLSIWVEGHQSNVFFYEDFTDTDTFTLGIQTEWQLQQMIRFGNRGLLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTNKLKYP+HSL+ FNSD  AIPVAW+I+  F+S D HRWMRAL++RV+TKDP+W LA
Sbjct: 301 RFGTNKLKYPVHSLVAFNSDYNAIPVAWIISTRFASGDAHRWMRALHSRVQTKDPSWRLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GF+VDDP ADV TIR++FQCSVL+SFWRVRHAWHKN++K+CSE   RAEI R L   VD 
Sbjct: 361 GFVVDDPLADVQTIREIFQCSVLLSFWRVRHAWHKNILKKCSENEKRAEILRQLEKTVDG 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           + +G   +  FE  ++D  D  +F+DYFKA W PR+G W T L +LPLAS ET AAMEFY
Sbjct: 421 VRQGDENVDSFEQMIKDQADDPEFVDYFKATWCPRLGMWTTALTSLPLASLETCAAMEFY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           H+QLK+RLLNEKD  VYQRTDWLVDKLGTKVHSYFWLDEY+ K++F+RYWKDEW+SGLT 
Sbjct: 481 HSQLKLRLLNEKDCAVYQRTDWLVDKLGTKVHSYFWLDEYSEKNNFSRYWKDEWMSGLTY 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WR+AL+I DSDV+IEG   KVTDQ+  ++ +VV NPGS FGIC+C WAEMG LCEH+ KV
Sbjct: 541 WRRALRIPDSDVIIEGGIAKVTDQITRDRKFVVWNPGSHFGICDCQWAEMGNLCEHMCKV 600

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
           I +CRKKG+ +PS+SL QY KAL DMLH  PHDSLIRDHA+S A+S+QKQLNA +   + 
Sbjct: 601 INMCRKKGTTRPSVSLLQYQKALTDMLHRPPHDSLIRDHAVSFAMSVQKQLNALISMGND 660

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDREL-VNEGHCVNDDVSSQKGR-NRGEELVASG 718
                  + ++++T E +         DRE+   +     D+V   K + N+ E   ASG
Sbjct: 661 LELRGPFQARMIKTLENKI--------DREVSTGDTESFRDNVLRNKSKLNQNESDCASG 712

Query: 719 GTA-----NELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELA 773
             A     +  +  L++  V+ N + G T EEE    + D++ + I IS P L SV+E+ 
Sbjct: 713 QEASNNITDNSSSELVDLTVTGNRVDGATAEEECPCTEMDIDTTSICISPPRLSSVEEVV 772

Query: 774 SSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPP 833
               F +++    + D E      S DA  +      + + ++  H+ ++V+   ++ P 
Sbjct: 773 GGNSFQQSKNGVQI-DMEFDILPSSYDAVCS----LNKFVDNQHHHEKIEVDSSLMNDPV 827

Query: 834 PTMEFLEQCTVSPQNGISSLDPQLPVLS 861
              +F  QC +  QNGI +  P+  + S
Sbjct: 828 TAADFSVQCMMKSQNGIHNDGPEPTIAS 855

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488530|ref|XP_004158072.1| PREDICTED: uncharacterized LOC101211068 [Cucumis sativus]

 Score = 1138 bits (2943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/868 (63%), Positives = 664/868 (76%), Gaps = 20/868 (2%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEI SLPVQNPPTLEF+S DLVWSKVEGWRD +DRVA+IPFARV DFVRGESSNK+
Sbjct: 1   MARWDEIFSLPVQNPPTLEFSSADLVWSKVEGWRDNMDRVAVIPFARVGDFVRGESSNKE 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR+     K KVDG+LEYILYWCSFGPDDHRKGG+ RPSR+TYVPKKKN
Sbjct: 61  CPTRFHVEARRRRALKAPFKAKVDGVLEYILYWCSFGPDDHRKGGVRRPSRSTYVPKKKN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPS+ALIIYN++KHVDK GLPCHGPQDKKA GTRAMFAP
Sbjct: 121 AGRPNTKRGCTCHFIVKRLIAEPSIALIIYNEDKHVDKKGLPCHGPQDKKAEGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLR+LSLL+VGVSVETIMQRHNESVE+QGGPCNRDDLLTHRYVR QERSIRRST
Sbjct: 181 YISEDLRLRILSLLYVGVSVETIMQRHNESVEKQGGPCNRDDLLTHRYVRIQERSIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           +ELD DDAVS+++WVE HQS VFFYEDF++ D FTLGIQTEWQLQQMIRFGNR LLASDS
Sbjct: 241 HELDEDDAVSLSIWVEGHQSNVFFYEDFTDTDTFTLGIQTEWQLQQMIRFGNRGLLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTNKLKYP+HSL+ FNSD  AIPVAW+I+  F+S D HRWMRAL++RV+TKDP+W LA
Sbjct: 301 RFGTNKLKYPVHSLVAFNSDYNAIPVAWIISTRFASGDAHRWMRALHSRVQTKDPSWRLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GF+VDDP ADV TIR++FQCSVL+SFWRVRHAWHKN++K+CSE   RAEI R L   VD 
Sbjct: 361 GFVVDDPLADVQTIREIFQCSVLLSFWRVRHAWHKNILKKCSENEKRAEILRQLEKTVDG 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           + +G   +  FE  ++D  D  +F+DYFKA W PR+G W T L +LPLAS ET AAMEFY
Sbjct: 421 VRQGDENVDSFEQMIKDQADDPEFVDYFKATWCPRLGMWTTALTSLPLASLETCAAMEFY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           H+QLK+RLLNEKD  VYQRTDWLVDKLGTKVHSYFWLDEY+ K++F+RYWKDEW+SGLT 
Sbjct: 481 HSQLKLRLLNEKDCAVYQRTDWLVDKLGTKVHSYFWLDEYSEKNNFSRYWKDEWMSGLTY 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WR+AL+I DSDV+IEG   KVTDQ+  ++ +VV NPGS FGIC+C WAEMG LCEH+ KV
Sbjct: 541 WRRALRIPDSDVIIEGGIAKVTDQITRDRKFVVWNPGSHFGICDCQWAEMGNLCEHMCKV 600

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
           I +CRKKG+ +PS+SL QY KAL DMLH  PHDSLIRDHA+S A+S+QKQLNA +   + 
Sbjct: 601 INMCRKKGTTRPSVSLLQYQKALTDMLHRPPHDSLIRDHAVSFAMSVQKQLNALISMGND 660

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDREL-VNEGHCVNDDVSSQKGR-NRGEELVASG 718
                  + ++++T E Q V        RE+   +     D+V   K + N+ E   ASG
Sbjct: 661 LELRGPFQARMIKTLENQIV--------REVSTGDTESFRDNVLRNKSKLNQNESDCASG 712

Query: 719 GTA-----NELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSPIYISTPGLVSVDELA 773
             A     +  +  L++  V+ N + G T E+E    + D++ + I IS P L SV+E+ 
Sbjct: 713 QEASNNITDNSSSELVDLTVTGNRVDGATAEKECPCTEMDIDTTSICISPPRLSSVEEVV 772

Query: 774 SSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPP 833
               F +++    + D E      S DA  +      + + ++  H+ ++V+   ++ P 
Sbjct: 773 GGNSFQQSKNGVQI-DMEFDILPSSYDAVCS----LNKFVDNQHHHEKIEVDSSLMNDPV 827

Query: 834 PTMEFLEQCTVSPQNGISSLDPQLPVLS 861
              +F  QC +  QNGI +  P+  + S
Sbjct: 828 TAADFSVQCMMKSQNGIHNDGPEPTIAS 855

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474707|ref|XP_003607638.1| hypothetical protein MTR_4g080580 [Medicago truncatula] gi|355508693|gb|AES89835.1| hypothetical protein MTR_4g080580 [Medicago truncatula]

 Score = 1090 bits (2819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/813 (66%), Positives = 616/813 (75%), Gaps = 64/813 (7%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWD ILSLPVQNP TLE +S +LVWSKVEGW DKLDRVALIPFARV+DFV+GES+NK+
Sbjct: 1   MARWDAILSLPVQNP-TLEISSDNLVWSKVEGWHDKLDRVALIPFARVNDFVKGESNNKE 59

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRRS ST+ K KVDGILEYILYWCSFGPDDHRKGG+VRPSRT+Y PKKKN
Sbjct: 60  CPTRFHVEARRRRSPSTTSKKKVDGILEYILYWCSFGPDDHRKGGVVRPSRTSYAPKKKN 119

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRGCTCHFIVKRLIAEPSVALIIYND+KHVDK GLPCHGPQDKKAAGT A FAP
Sbjct: 120 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDDKHVDKKGLPCHGPQDKKAAGTPAEFAP 179

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRVLSLL+VGVSVETIMQRHNESVE+QGGPCNRDDLLTHRYVRRQER IRRST
Sbjct: 180 YISEDLRLRVLSLLYVGVSVETIMQRHNESVEKQGGPCNRDDLLTHRYVRRQEREIRRST 239

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DD+VSI+MWVES QS VFFY+DFS+ DPF LGIQTEWQLQQMI+FGNR LLASDS
Sbjct: 240 YELDADDSVSISMWVESRQSNVFFYQDFSDSDPFILGIQTEWQLQQMIKFGNRGLLASDS 299

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTN LKYP+HSL+VFNSDKKAIPVAW+I P FS  D HRWMRAL+NRV  KDPTW LA
Sbjct: 300 RFGTNTLKYPVHSLLVFNSDKKAIPVAWIITPKFSCLDAHRWMRALHNRVHNKDPTWKLA 359

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP  DV  IRDVFQCSVL+SFWRVRH WHKN++K C E  M+ +I + LG  +D 
Sbjct: 360 GFIVDDPQYDVPAIRDVFQCSVLISFWRVRHLWHKNIMK-CLETDMQIKISQRLGWIMDS 418

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRI------------------------ 456
           IC+  GT++LFE+ +EDF+D  +FMDYFKA WYPR+                        
Sbjct: 419 ICRRQGTMSLFEDFVEDFIDEFNFMDYFKATWYPRMEIIVCPEPVIVVFVFIALYALRKE 478

Query: 457 ------------GAWITVLKTLPLASQETSAAMEFYHNQLKVRLLNEKDSGVYQRTDWLV 504
                        AW   LKT PLASQE+ AA+E YHNQLK+RLLNEKD   YQR DWLV
Sbjct: 479 ENMSFHIKTGLYRAWADALKTFPLASQESWAAIELYHNQLKIRLLNEKDVDAYQRADWLV 538

Query: 505 DKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKALKILDSDVVIEGRCGKVTDQ 564
           DKLGTKVHSYFWLDE + KD FARYWK+EW SGL  WRKALKI D++V++E    KV D+
Sbjct: 539 DKLGTKVHSYFWLDECSDKDGFARYWKNEWTSGLASWRKALKIPDTNVLMEDGRAKVKDE 598

Query: 565 LDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRKKGSVKPSISLFQYNKALM 624
            D +K Y+V NPGS   IC+C WA+ G LCEH+LKV+ V R +GSV PSISL QY++AL 
Sbjct: 599 DDQDKTYIVSNPGSMLSICDCCWAKDGNLCEHILKVLSVFRSRGSVLPSISLLQYHQALK 658

Query: 625 DMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFH 684
            MLHC P DSLIRDHA+SLAVS+Q+QLN  +D ES   +V   EK+I     Q++     
Sbjct: 659 SMLHCPPFDSLIRDHAVSLAVSVQRQLNTLLDKESVNTAVEPNEKRIFIDIHQESSRVVS 718

Query: 685 ADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTE 744
           A Q++ LV + H VND +S   G   G+         +E+AG         NSL      
Sbjct: 719 AAQNQALVCKMHAVNDLLSWDSGTRYGK--------PSEIAG--------ENSL------ 756

Query: 745 EEISFAKTDVEQSPIYISTPGLVSVDELASSGG 777
                A  DV+QS I++ + GL SVDE  SS  
Sbjct: 757 ----HADMDVDQSSIFVPSSGLYSVDETVSSNN 785

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79474118|ref|NP_193133.3| zinc ion binding protein [Arabidopsis thaliana] gi|332657954|gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana]

 Score = 1055 bits (2727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/758 (66%), Positives = 599/758 (79%), Gaps = 23/758 (3%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWD+I SLPVQNP   EF+S DLVWSKVEG+RD +DR+ALIP+ RVDDFVRGE SNKD
Sbjct: 1   MARWDQIFSLPVQNPTLPEFSSTDLVWSKVEGYRDNIDRLALIPYTRVDDFVRGECSNKD 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPT FHVEARRR++     KPKVDGILEYILYWCSFGPDD+RKGG VRPSR+TYVPKK N
Sbjct: 61  CPTSFHVEARRRKAKGKKYKPKVDGILEYILYWCSFGPDDNRKGGTVRPSRSTYVPKKNN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPN+KRGC CHFIVKRLIAEP+VAL+IYN++KHVD+ G PCHGPQDKKAAGTRAMFAP
Sbjct: 121 AGRPNSKRGCRCHFIVKRLIAEPTVALVIYNNDKHVDEKGFPCHGPQDKKAAGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRV SLL+VGVSVETIMQRHNESVE+QGGP NRDDLLTHRYVRR ERSIRRST
Sbjct: 181 YISEDLRLRVSSLLYVGVSVETIMQRHNESVEKQGGPSNRDDLLTHRYVRRLERSIRRST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YELD DD VSI+MWVESHQS+VFF+E FS+ DPF+LGIQTEWQLQQMIRFGN  LLASDS
Sbjct: 241 YELDEDDDVSISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQMIRFGNCRLLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTN LKYP+HSL+VF+S+ KAIPVAW+IAP FSS D +RWMRAL NRV  KDP+W +A
Sbjct: 301 RFGTNTLKYPIHSLVVFDSENKAIPVAWIIAPRFSSGDAYRWMRALCNRVHAKDPSWKVA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP AD+  IRDVFQC VL SFWR+RHAWHKN++KRC E   R EI R LG AVD 
Sbjct: 361 GFIVDDPFADIIAIRDVFQCPVLFSFWRLRHAWHKNIIKRCRETKTRVEISRHLGQAVDK 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           I +  GT  LF++ +EDF+   +F++YF++VW PRIGAW + L++LPLASQET AAME Y
Sbjct: 421 ISRRQGTATLFDSFVEDFVGSPEFVEYFRSVWSPRIGAWTSALQSLPLASQETCAAMELY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           H QLK RLLNE+DS  YQR DWLVDKLGTKVHSYFWLDEY+GKD+FARYWK+EWVSGLT 
Sbjct: 481 HYQLKCRLLNERDSEAYQRADWLVDKLGTKVHSYFWLDEYSGKDNFARYWKEEWVSGLTS 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           +RKAL I DSDVVI G   K+TD+ DGN+++VV NPGSQFG+C+CSWAE GY+C+H++K+
Sbjct: 541 FRKALSIPDSDVVISGMSAKITDECDGNEIHVVWNPGSQFGVCSCSWAEKGYICKHMIKL 600

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
             +C    + + S SL QY + L+D+L C PHDSL RD+A+SLAVS++KQ+NA    + S
Sbjct: 601 TQLCLGNRAARQSASLLQYYQTLIDLLRCPPHDSLFRDYAVSLAVSVEKQINALGYLQKS 660

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGT 720
             +  +++K+I  +  + + G    + D    +EGH                     G  
Sbjct: 661 DANEGNLQKEIAFS--EPSSGKSLDESDLLDKHEGH---------------------GEV 697

Query: 721 ANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSP 758
           A +L GGL    +S   +C G  E+ IS ++ ++  SP
Sbjct: 698 ATDLDGGLSKMPMSCLRVCSGNAEDIISGSEMEIGLSP 735

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800880|ref|XP_002868324.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297314160|gb|EFH44583.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score = 1052 bits (2720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/757 (66%), Positives = 598/757 (78%), Gaps = 24/757 (3%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWD+I SLPVQNP   EF+S DLVWSKVEG+RD +DR+ALIP+ RVDDFVRGESSNKD
Sbjct: 1   MARWDQIFSLPVQNPTLPEFSSADLVWSKVEGYRDNIDRLALIPYTRVDDFVRGESSNKD 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPT FHVEARRR++     KPKVDGILEYILYWCSFGPDD+RKGG VRPSR+TYVPKK N
Sbjct: 61  CPTSFHVEARRRKAKGKKYKPKVDGILEYILYWCSFGPDDNRKGGAVRPSRSTYVPKKNN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPN+KRGC CHFIVKRLIAEP+VAL+IYN++KHVD+ GLPCHGPQDKKAAGTRAMFAP
Sbjct: 121 AGRPNSKRGCRCHFIVKRLIAEPTVALVIYNNDKHVDEKGLPCHGPQDKKAAGTRAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRV SLL+VGVSVETIMQRHNESVE+QGGP NRDDLLTHRYVRR ERSIRRS+
Sbjct: 181 YISEDLRLRVSSLLYVGVSVETIMQRHNESVEKQGGPSNRDDLLTHRYVRRLERSIRRSS 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           YEL+ DD +SI+MWVESHQS+VFF+E FS+ DPF+LGIQTEWQLQQMIRFGN  LLASDS
Sbjct: 241 YELNEDDDISISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQMIRFGNCRLLASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTN LKYP+HSL+VF+S+ KAIPVAW+IAP FSS D +RWMRAL NRV  KDP+W +A
Sbjct: 301 RFGTNTLKYPIHSLVVFDSENKAIPVAWIIAPRFSSGDAYRWMRALCNRVHAKDPSWKVA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVDDP AD+ TIRDVFQC VL SFWRVRHAWHKN++KRC E   R +I R LG AVD 
Sbjct: 361 GFIVDDPFADIITIRDVFQCPVLFSFWRVRHAWHKNIIKRCPETETRVDISRHLGQAVDK 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           IC+  GT  LF+   EDF+   +F++YF++VW PRIGAW + L++LPLASQET AAME Y
Sbjct: 421 ICRRQGTATLFDTFAEDFVGSPEFVEYFRSVWSPRIGAWTSALQSLPLASQETCAAMELY 480

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           H QLK RLLNE+DS  YQR DWLVDKLGTKVHSYFWLDEY+GKD+FARYWKDEWVSGLT 
Sbjct: 481 HYQLKCRLLNERDSEAYQRADWLVDKLGTKVHSYFWLDEYSGKDNFARYWKDEWVSGLTS 540

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           +RKAL I DSDVVI G   K+TD+ DGN+++V  NPGSQFG+C+CSWAE GYLC+H++K+
Sbjct: 541 FRKALSIPDSDVVISGMSAKITDECDGNEIHVW-NPGSQFGVCSCSWAEKGYLCKHMIKL 599

Query: 601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
             +C    + + S SL QY + L+D+LHC PHDSL RD+AISLAVS++KQ+NA  + + S
Sbjct: 600 TQLCLGNRAARQSASLLQYYQTLIDLLHCPPHDSLFRDYAISLAVSVEKQINAPGNLQKS 659

Query: 661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGT 720
             +  +++K+I  ++     G    + +    +EGH                     G  
Sbjct: 660 DANEGNLQKEIAFSDPSN--GKSLDESNLLDKHEGH---------------------GEV 696

Query: 721 ANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQS 757
           A  L G L    +S   +C    ++ IS ++ ++E S
Sbjct: 697 ATNLDGALSKMPMSCLRVCSENVKDIISGSEMEIEPS 733

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063649|ref|XP_002301246.1| predicted protein [Populus trichocarpa] gi|222842972|gb|EEE80519.1| predicted protein [Populus trichocarpa]

 Score =  996 bits (2575), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/653 (73%), Positives = 526/653 (80%), Gaps = 35/653 (5%)

Query: 1   MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
           MARWDEILS+PVQNPPTLEF++ D+VWSKV GWRD LDR+ALIPFARVDDFVRGE +NKD
Sbjct: 1   MARWDEILSIPVQNPPTLEFSASDIVWSKVGGWRDNLDRLALIPFARVDDFVRGEPANKD 60

Query: 61  CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
           CPTRFHVEARRRR   TS K KVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN
Sbjct: 61  CPTRFHVEARRRRPPQTSYKQKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120

Query: 121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
           AGRPNTKRG TCHFIVKRLIAEPSVALIIYN +KHVDK GLPCHGPQDKKA GT AMFAP
Sbjct: 121 AGRPNTKRGYTCHFIVKRLIAEPSVALIIYNQDKHVDKKGLPCHGPQDKKAEGTHAMFAP 180

Query: 181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
           YISEDLRLRVLSLL+VGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQE+SIR ST
Sbjct: 181 YISEDLRLRVLSLLYVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQEKSIRCST 240

Query: 241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
           +ELD DDAVSINMWVESH + VFF+EDFS+ +PFTLGIQTEWQLQQMIRFGNRSL+ASDS
Sbjct: 241 FELDTDDAVSINMWVESHLNQVFFFEDFSDSEPFTLGIQTEWQLQQMIRFGNRSLVASDS 300

Query: 301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
           RFGTNKLKYP+HSL+VFNSD KAIPVAW+I P F++AD HR MRALYNRVRTKDP+W LA
Sbjct: 301 RFGTNKLKYPVHSLVVFNSDNKAIPVAWIITPRFANADAHRRMRALYNRVRTKDPSWKLA 360

Query: 361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
           GFIVD P  D+ TIRDVFQCSVL SFWRVRHAW KN +KRC E  +R +I + LG  V D
Sbjct: 361 GFIVDHPLTDILTIRDVFQCSVLTSFWRVRHAWLKNRIKRCMETELRVQISKWLGQTVYD 420

Query: 421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
           IC+G  T                            +G+W T +KTLPLASQ T AAMEFY
Sbjct: 421 ICRGQAT----------------------------VGSWTTAIKTLPLASQGTCAAMEFY 452

Query: 481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
           HNQLKVRLLNEK  GVYQR DWLVDKLGTKVHSYFWLDEY+ KDDFARYWKDEWVSGLT 
Sbjct: 453 HNQLKVRLLNEKKPGVYQRADWLVDKLGTKVHSYFWLDEYSEKDDFARYWKDEWVSGLTS 512

Query: 541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
           WRKALKI DSDVV++GRC KVTDQL  ++VYVV NPGSQF IC+C WAEMG LC    K 
Sbjct: 513 WRKALKIPDSDVVMDGRCAKVTDQLYRDRVYVVWNPGSQFAICDCRWAEMGNLCTTWRKA 572

Query: 601 I-----IVCRKKGSVKPSISLFQYNKAL-MDMLHCTPHDSLIRD-HAISLAVS 646
           +     +V R   S      L   N  +  DM     +D   RD H +S  ++
Sbjct: 573 VNSLEQLVVRGTNSSNQDRELVNENHHIDKDMSSPNENDYQERDRHGLSRGIT 625

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1021
TAIR|locus:2129271	778	AT4G13970 [Arabidopsis thalian	0.710	0.931	0.681	2.5e-278
TAIR|locus:2036541	703	AT1G60560 [Arabidopsis thalian	0.626	0.910	0.435	3e-156
CGD|CAL0003874	1404	PGA55 [Candida albicans (taxid	0.325	0.236	0.190	8.7e-05
UNIPROTKB|Q59SG9	1404	PGA55 "Flocculin-like protein"	0.325	0.236	0.190	8.7e-05

TAIR|locus:2129271 AT4G13970 [Arabidopsis thaliana (taxid:3702)]

 Score = 2675 (946.7 bits), Expect = 2.5e-278, P = 2.5e-278
 Identities = 496/728 (68%), Positives = 587/728 (80%)

Query:     1 MARWDEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKD 60
             MARWD+I SLPVQNP   EF+S DLVWSKVEG+RD +DR+ALIP+ RVDDFVRGE SNKD
Sbjct:     1 MARWDQIFSLPVQNPTLPEFSSTDLVWSKVEGYRDNIDRLALIPYTRVDDFVRGECSNKD 60

Query:    61 CPTRFHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKN 120
             CPT FHVEARRR++     KPKVDGILEYILYWCSFGPDD+RKGG VRPSR+TYVPKK N
Sbjct:    61 CPTSFHVEARRRKAKGKKYKPKVDGILEYILYWCSFGPDDNRKGGTVRPSRSTYVPKKNN 120

Query:   121 AGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAP 180
             AGRPN+KRGC CHFIVKRLIAEP+VAL+IYN++KHVD+ G PCHGPQDKKAAGTRAMFAP
Sbjct:   121 AGRPNSKRGCRCHFIVKRLIAEPTVALVIYNNDKHVDEKGFPCHGPQDKKAAGTRAMFAP 180

Query:   181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST 240
             YISEDLRLRV SLL+VGVSVETIMQRHNESVE+QGGP NRDDLLTHRYVRR ERSIRRST
Sbjct:   181 YISEDLRLRVSSLLYVGVSVETIMQRHNESVEKQGGPSNRDDLLTHRYVRRLERSIRRST 240

Query:   241 YELDLDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDS 300
             YELD DD VSI+MWVESHQS+VFF+E FS+ DPF+LGIQTEWQLQQMIRFGN  LLASDS
Sbjct:   241 YELDEDDDVSISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQMIRFGNCRLLASDS 300

Query:   301 RFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLA 360
             RFGTN LKYP+HSL+VF+S+ KAIPVAW+IAP FSS D +RWMRAL NRV  KDP+W +A
Sbjct:   301 RFGTNTLKYPIHSLVVFDSENKAIPVAWIIAPRFSSGDAYRWMRALCNRVHAKDPSWKVA 360

Query:   361 GFIVDDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDD 420
             GFIVDDP AD+  IRDVFQC VL SFWR+RHAWHKN++KRC E   R EI R LG AVD 
Sbjct:   361 GFIVDDPFADIIAIRDVFQCPVLFSFWRLRHAWHKNIIKRCRETKTRVEISRHLGQAVDK 420

Query:   421 ICKGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFY 480
             I +  GT  LF++ +EDF+   +F++YF++VW PRIGAW + L++LPLASQET AAME Y
Sbjct:   421 ISRRQGTATLFDSFVEDFVGSPEFVEYFRSVWSPRIGAWTSALQSLPLASQETCAAMELY 480

Query:   481 HNQLKVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTC 540
             H QLK RLLNE+DS  YQR DWLVDKLGTKVHSYFWLDEY+GKD+FARYWK+EWVSGLT 
Sbjct:   481 HYQLKCRLLNERDSEAYQRADWLVDKLGTKVHSYFWLDEYSGKDNFARYWKEEWVSGLTS 540

Query:   541 WRKALKILDSDVVIEGRCGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKV 600
             +RKAL I DSDVVI G   K+TD+ DGN+++VV NPGSQFG+C+CSWAE GY+C+H++K+
Sbjct:   541 FRKALSIPDSDVVISGMSAKITDECDGNEIHVVWNPGSQFGVCSCSWAEKGYICKHMIKL 600

Query:   601 IIVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQKQLNASVDFESS 660
               +C    + + S SL QY + L+D+L C PHDSL RD+A+SLAVS++KQ+NA    + S
Sbjct:   601 TQLCLGNRAARQSASLLQYYQTLIDLLRCPPHDSLFRDYAVSLAVSVEKQINALGYLQKS 660

Query:   661 QISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHC-VNDDVSSQKGRNRGEELVASGG 719
               +  +++K+I  +  + + G    + D    +EGH  V  D+     +     L    G
Sbjct:   661 DANEGNLQKEIAFS--EPSSGKSLDESDLLDKHEGHGEVATDLDGGLSKMPMSCLRVCSG 718

Query:   720 TANELAGG 727
              A ++  G
Sbjct:   719 NAEDIISG 726

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2036541 AT1G60560 [Arabidopsis thaliana (taxid:3702)]

 Score = 1523 (541.2 bits), Expect = 3.0e-156, P = 3.0e-156
 Identities = 282/647 (43%), Positives = 422/647 (65%)

Query:     5 DEILSLPVQNPPTLEFASVDLVWSKVEGWRDKLDRVALIPFARVDDFVRGESSNKDCPTR 64
             + +  +PVQNP   +F+  DL W+K  G  +  D+VAL+P+ARVD+F+ GE SN +CPTR
Sbjct:     5 ESLEEIPVQNPQVEDFSWADLTWTKF-GTSEHHDQVALVPYARVDEFIIGECSNAECPTR 63

Query:    65 FHVEARRRRSTSTSCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKNAGRP 124
             FH+E  R+RS  +  + K D  LEY LYWCSFGP+++ +GG V PSR   +  +  A RP
Sbjct:    64 FHIERGRKRSRGSLKEYKSDEYLEYRLYWCSFGPENYGEGGGVLPSRKYRLNTRNRAARP 123

Query:   125 NTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISE 184
              + RGCTCHF+VKRL A PS+AL+IYN+ +HV+K G  CHGP D+ A G  A   PYI  
Sbjct:   124 QSMRGCTCHFVVKRLYARPSLALLIYNERRHVNKAGFVCHGPLDRDAIGPGAKKIPYICN 183

Query:   185 DLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELD 244
             +++ + +S++++G+  E ++++H E ++R  G     D L  +YV +    I+RST+ELD
Sbjct:   184 EIQQQTMSMIYLGIPEENVLEKHIEGIQRYCGSDATVDSLASQYVHKLGMIIKRSTHELD 243

Query:   245 LDDAVSINMWVESHQSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGT 304
             LDD  SI +W E ++  +FFY++ SE D F LGIQTEWQLQQ++RFG+ SL+A+DS FG 
Sbjct:   244 LDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQLVRFGHCSLVAADSTFGI 303

Query:   305 NKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIV 364
              +LKYPL +L+VF+S   A+PVAW+I+ S+  +D  +WM+ L  R ++ +P + + GFI+
Sbjct:   304 KRLKYPLCTLLVFDSRHHALPVAWIISRSYLKSDVEKWMKILLQRAQSVEPGFKINGFII 363

Query:   365 DDPSADVHTIRDVFQCSVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKG 424
             DD + +   IRD F C +L S WRVR +W +N+VK+C  I ++ ++F+CLG  V  I  G
Sbjct:   364 DDAATETDPIRDTFCCPILFSLWRVRRSWLRNVVKKCDSIEVQRDLFKCLGELVYSIWDG 423

Query:   425 HGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQL 484
               T    E   +DF+D + FM YF + W P+IG W++ +K+LPLASQE   A+E YH +L
Sbjct:   424 VDTTKALEKLTQDFVDQTAFMQYFTSTWLPKIGMWLSTMKSLPLASQEACGAIEAYHIKL 483

Query:   485 KVRLLNEKDSGVYQRTDWLVDKLGTKVHSYFWLDEYTGKDDFARYWKDEWVSGLTCWRKA 544
             KV+L ++   G  QR DWLV KL T++HS +WLD Y  + D  +  K+E+++  T W +A
Sbjct:   484 KVKLFDDTHLGALQRVDWLVHKLTTELHSSYWLDRYADESDSFQNVKEEYIAS-TSWYRA 542

Query:   545 LKILDSDVVIEGR---CGKVTDQLDGNKVYVVRNPGSQFGICNCSWAEMGYLCEHLLKVI 601
             ++I DS V ++       KV  Q D +   VV NPGS+F  C+C+W+  G LC+H++KV 
Sbjct:   543 MEIPDSAVTLDENNILLAKVQSQRDSDVTRVVWNPGSEFAFCDCTWSLQGNLCKHIIKVN 602

Query:   602 IVCRKKGSVKPSISLFQYNKALMDMLHCTPHDSLIRDHAISLAVSIQ 648
              +C  +     S+SL  + + L ++      DS+  D  +S+A+++Q
Sbjct:   603 TMCENREGYGDSMSLRSFKEKLRNIKMKPMDDSIALD--LSMALTLQ 647

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

CGD|CAL0003874 PGA55 [Candida albicans (taxid:5476)]

 Score = 136 (52.9 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 65/341 (19%), Positives = 140/341 (41%)

Query:   642 SLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDD 701
             S  VS   ++++S +  SS   + S   ++V ++ Q T  +       E+V+    V+  
Sbjct:   153 SEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSS 212

Query:   702 ---VSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSP 758
                VSS    +   E+ +S   ++       +++VS++S    ++ E +S +      S 
Sbjct:   213 SEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 272

Query:   759 IYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDC 818
             +  S+  + S  E++SS   S + + +  S+   S    S    V+  +E     S+   
Sbjct:   273 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSS 332

Query:   819 HQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMY 878
               ++      +          E  + S  +  S +     ++S+ ++  S S +      
Sbjct:   333 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS- 391

Query:   879 MPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHN 938
               V S +  VS ++ +   + +EV ++   ++ S  S+  + VS  S     ++S    +
Sbjct:   392 SEVSSSSEVVSSSSEV--SSSSEVSSSSEVSSSSEVSSS-SEVSSSS--QVISSSEVVSS 446

Query:   939 ANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTNSCSV 979
             ++ V S     SS + +S  S+  +   V   SQ T+S  +
Sbjct:   447 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEI 487

GO:0009986 "cell surface" evidence=ISS

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59SG9 PGA55 "Flocculin-like protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 136 (52.9 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 65/341 (19%), Positives = 140/341 (41%)

Query:   642 SLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFHADQDRELVNEGHCVNDD 701
             S  VS   ++++S +  SS   + S   ++V ++ Q T  +       E+V+    V+  
Sbjct:   153 SEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSS 212

Query:   702 ---VSSQKGRNRGEELVASGGTANELAGGLINQLVSANSLCGGTTEEEISFAKTDVEQSP 758
                VSS    +   E+ +S   ++       +++VS++S    ++ E +S +      S 
Sbjct:   213 SEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 272

Query:   759 IYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSKDAAVTDQNEAEEGISDKDC 818
             +  S+  + S  E++SS   S + + +  S+   S    S    V+  +E     S+   
Sbjct:   273 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSS 332

Query:   819 HQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPVLSNKADADSHSDKASRPMY 878
               ++      +          E  + S  +  S +     ++S+ ++  S S +      
Sbjct:   333 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS- 391

Query:   879 MPVESKAVGVSETAGIVGDNENEVGNAKGGAAKSPCSTDIALVSDGSCDDAANNSNTCHN 938
               V S +  VS ++ +   + +EV ++   ++ S  S+  + VS  S     ++S    +
Sbjct:   392 SEVSSSSEVVSSSSEV--SSSSEVSSSSEVSSSSEVSSS-SEVSSSS--QVISSSEVVSS 446

Query:   939 ANGVQSVMPSESSRNHMSIPSDTENQQAVGVVSQKTNSCSV 979
             ++ V S     SS + +S  S+  +   V   SQ T+S  +
Sbjct:   447 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEI 487


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1021      1021   0.00080  123 3  11 22  0.41    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  634 (67 KB)
  Total size of DFA:  536 KB (2244 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  91.71u 0.11s 91.82t   Elapsed:  00:00:04
  Total cpu time:  91.72u 0.11s 91.83t   Elapsed:  00:00:04
  Start:  Tue May 21 20:45:03 2013   End:  Tue May 21 20:45:07 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009986 "cell surface" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00001687001 SubName- Full=Chromosome chr13 scaffold_120, whole genome shotgun sequence; (965 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1021
PLN03097	846	FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provis	100.0
PF10551	93	MULE: MULE transposase domain; InterPro: IPR018289	99.59
PF00872	381	Transposase_mut: Transposase, Mutator family; Inte	99.09
COG3328	379	Transposase and inactivated derivatives [DNA repli	97.54
PF03101	91	FAR1: FAR1 DNA-binding domain; InterPro: IPR004330	97.11
PF15299	225	ALS2CR8: Amyotrophic lateral sclerosis 2 chromosom	96.03
smart00575	28	ZnF_PMZ plant mutator transposase zinc finger.	94.5
PF04434	40	SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc f	93.44
PF01610	249	DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Aut	92.45
PF03050	271	DDE_Tnp_IS66: Transposase IS66 family ; InterPro:	86.6

>PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional

Probab=100.00  E-value=4.6e-42  Score=416.37  Aligned_cols=477  Identities=15%  Similarity=0.162  Sum_probs=329.0

Q ss_pred             hcccCCCCCCCCccccceEEEEEEeeccCCCcc----CCCC---ccc---c--Ccccc------------------cccc
Q 001714           69 ARRRRSTSTSCKPKVDGILEYILYWCSFGPDDH----RKGG---IVR---P--SRTTY------------------VPKK  118 (1021)
Q Consensus        69 ~~r~~~~g~~~~~~~d~~ley~~Y~Cs~Gp~~~----~~gg---~~r---p--s~~~~------------------~~~k  118 (1021)
                      ..-.|-+||.|++.+++|.||+.|+...|+...    +++.   .+.   .  ++-..                  .+++
T Consensus        70 ~~~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~~~~~  149 (846)
T PLN03097         70 TNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQDPEN  149 (846)
T ss_pred             CCccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCcccccccccccccccccCccc
Confidence            334699999999999999999999999999974    1111   110   0  11000                  0000


Q ss_pred             cCCCCCCCCCCceeEEEEEEeecCCcEEEEEEecccccCCCCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHcCC
Q 001714          119 KNAGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGV  198 (1021)
Q Consensus       119 ~r~~Rp~~k~GC~A~f~Vkrl~~~gsv~vii~~~~~Hvh~~~~~cH~p~d~~a~gp~a~~~p~ISde~R~~I~~LL~~GI  198 (1021)
                      .+++|+.+++||+|+++|++. .++. |+++-...+|+|+..     |.+            .++...|           
T Consensus       150 ~~~rR~~tRtGC~A~m~Vk~~-~~gk-W~V~~fv~eHNH~L~-----p~~------------~~~~~~r-----------  199 (846)
T PLN03097        150 GTGRRSCAKTDCKASMHVKRR-PDGK-WVIHSFVKEHNHELL-----PAQ------------AVSEQTR-----------  199 (846)
T ss_pred             ccccccccCCCCceEEEEEEc-CCCe-EEEEEEecCCCCCCC-----Ccc------------ccchhhh-----------
Confidence            112455689999999999983 4554 555555556988743     100            1111111           


Q ss_pred             ChhHHHHHhhhhhhhcCCCCCCCCcccHHHHHHHHHHhhccccccCCchHHhHHHHHHhhC--CceEEeecCCCCCCeee
Q 001714          199 SVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQ--SYVFFYEDFSEYDPFTL  276 (1021)
Q Consensus       199 s~~~Il~~ire~~~k~gG~~~R~~llT~qDVrNi~r~~~r~~~~L~~dD~~SV~~WVee~q--~~vF~yqd~sd~d~Fvl  276 (1021)
                         .|+..+...+   + ..... ..+..|.+|..+..++.  .+...|...+..++++++  +|.|||.-..|++.-+.
T Consensus       200 ---~~~~~~~~~~---~-~~~~v-~~~~~d~~~~~~~~r~~--~~~~gD~~~ll~yf~~~q~~nP~Ffy~~qlDe~~~l~  269 (846)
T PLN03097        200 ---KMYAAMARQF---A-EYKNV-VGLKNDSKSSFDKGRNL--GLEAGDTKILLDFFTQMQNMNSNFFYAVDLGEDQRLK  269 (846)
T ss_pred             ---hhHHHHHhhh---h-ccccc-cccchhhcchhhHHHhh--hcccchHHHHHHHHHHHHhhCCCceEEEEEccCCCee
Confidence               1222111111   1 11111 23445667666554433  456789999999998886  89999997777776666


Q ss_pred             ecc--cHHHHHHHHHhCCCceEEEecCCCCCccCCceEEEEEEcCCCCeEEEEEEEecCCChhhHHHHH-HHHHHHhhcc
Q 001714          277 GIQ--TEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWM-RALYNRVRTK  353 (1021)
Q Consensus       277 gIq--T~~Q~~~L~rfG~~gVV~lDSThgtNky~~PL~TLlV~D~~G~giPVAf~Its~ET~edi~~WL-r~f~~~v~~k  353 (1021)
                      .|+  ....+..+..||+  ||++|+||.||+|++||..++|+|+||+.+++|++|+.+|+.+ .+.|| +.|+..|.++
T Consensus       270 niFWaD~~sr~~Y~~FGD--vV~fDTTY~tN~y~~Pfa~FvGvNhH~qtvlfGcaLl~dEt~e-Sf~WLf~tfl~aM~gk  346 (846)
T PLN03097        270 NLFWVDAKSRHDYGNFSD--VVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDESAA-TYSWLMQTWLRAMGGQ  346 (846)
T ss_pred             eEEeccHHHHHHHHhcCC--EEEEeceeeccccCcEEEEEEEecCCCCeEEEEEEEcccCchh-hHHHHHHHHHHHhCCC
Confidence            654  5567778999998  9999999999999999999999999999999999999999985 67797 7777776543


Q ss_pred             CCCcceeEEEecCchhhHHHHHHhcCC-CceeehHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHhhhcCCCChHHHHH
Q 001714          354 DPTWNLAGFIVDDPSADVHTIRDVFQC-SVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFE  432 (1021)
Q Consensus       354 ~p~~~Pk~fMTD~d~Ae~nAI~~VFp~-~~LLC~WHV~KAW~knL~kk~~~~e~r~eVyk~L~~Lv~~tte~~~~~e~~e  432 (1021)
                          .|++||||.+.|+.+||.+|||. .|.+|.|||+++..+++...+.   ....+...+...++.....++|+..|.
T Consensus       347 ----~P~tIiTDqd~am~~AI~~VfP~t~Hr~C~wHI~~~~~e~L~~~~~---~~~~f~~~f~~cv~~s~t~eEFE~~W~  419 (846)
T PLN03097        347 ----APKVIITDQDKAMKSVISEVFPNAHHCFFLWHILGKVSENLGQVIK---QHENFMAKFEKCIYRSWTEEEFGKRWW  419 (846)
T ss_pred             ----CCceEEecCCHHHHHHHHHHCCCceehhhHHHHHHHHHHHhhHHhh---hhhHHHHHHHHHHhCCCCHHHHHHHHH
Confidence                68999999999999999999999 5999999999988888864322   234566778888887766668888999


Q ss_pred             HHHHHhc-CchHHHHHHHHhcccchhhhhhhh-ccCCCCCCCCChHHHHhhHHHhhhhcCCccC-cccchHHHHHHHhcc
Q 001714          433 NCMEDFM-DGSDFMDYFKAVWYPRIGAWITVL-KTLPLASQETSAAMEFYHNQLKVRLLNEKDS-GVYQRTDWLVDKLGT  509 (1021)
Q Consensus       433 ~f~e~f~-d~~~F~~YFks~Wlpr~e~WA~~y-R~~P~ag~~TNN~iES~H~~LK~~yL~~~kn-~~~~RlD~LV~~L~~  509 (1021)
                      .+++.|. ...+   |+...|- .+++||.+| |..+.+++.|+++.||+|+.||.++-..... .|+.++|.++..+..
T Consensus       420 ~mi~ky~L~~n~---WL~~LY~-~RekWapaY~k~~F~agm~sTqRSES~Ns~fk~yv~~~tsL~~Fv~qye~~l~~~~e  495 (846)
T PLN03097        420 KILDRFELKEDE---WMQSLYE-DRKQWVPTYMRDAFLAGMSTVQRSESINAFFDKYVHKKTTVQEFVKQYETILQDRYE  495 (846)
T ss_pred             HHHHhhcccccH---HHHHHHH-hHhhhhHHHhcccccCCcccccccccHHHHHHHHhCcCCCHHHHHHHHHHHHHHHHH
Confidence            9999985 3333   4444443 258999988 7788899999999999999999754333333 356778877764322


Q ss_pred             -cccccc---------c-----hhcccC--cchhhhhhhhhhccccchhhhhhcc-cCccEEEcCceeEEeecCCCceEE
Q 001714          510 -KVHSYF---------W-----LDEYTG--KDDFARYWKDEWVSGLTCWRKALKI-LDSDVVIEGRCGKVTDQLDGNKVY  571 (1021)
Q Consensus       510 -eV~s~y---------~-----lde~s~--~~~~~r~~r~E~~s~~ts~~kal~I-p~s~V~ie~~~~kV~Sq~d~~~~y  571 (1021)
                       +....|         +     ..+.+.  +..+|+.||.|.... ...+ +..+ .+..+    ..|.|........+.
T Consensus       496 kE~~aD~~s~~~~P~l~t~~piEkQAs~iYT~~iF~kFQ~El~~~-~~~~-~~~~~~dg~~----~~y~V~~~~~~~~~~  569 (846)
T PLN03097        496 EEAKADSDTWNKQPALKSPSPLEKSVSGVYTHAVFKKFQVEVLGA-VACH-PKMESQDETS----ITFRVQDFEKNQDFT  569 (846)
T ss_pred             HHHHhhhhcccCCcccccccHHHHHHHHHhHHHHHHHHHHHHHHh-hheE-EeeeccCCce----EEEEEEEecCCCcEE
Confidence             221111         0     111121  566677788877542 1111 1000 11100    346776655445567


Q ss_pred             EEecCCCcceeeecc-CcccCccchhHHHHHHhhc
Q 001714          572 VVRNPGSQFGICNCS-WAEMGYLCEHLLKVIIVCR  605 (1021)
Q Consensus       572 VV~n~gse~~~CsC~-~~~~G~lCkHilkV~~~~~  605 (1021)
                      |+|+...+...|+|. |.+.|+||+|+|+|+.+..
T Consensus       570 V~~d~~~~~v~CsC~kFE~~GILCrHaLkVL~~~~  604 (846)
T PLN03097        570 VTWNQTKLEVSCICRLFEYKGYLCRHALVVLQMCQ  604 (846)
T ss_pred             EEEecCCCeEEeeccCeecCccchhhHHHHHhhcC
Confidence            779998889999999 5999999999999998765

>PF10551 MULE: MULE transposase domain; InterPro: IPR018289 This entry represents a domain found in Mutator-like elements (MULE)-encoded tranposases, some of which also contain a zinc-finger motif [, ]

Probab=99.59  E-value=3.2e-15  Score=136.90  Aligned_cols=89  Identities=20%  Similarity=0.282  Sum_probs=76.0

Q ss_pred             cCCCCCccCCceEE---EEEEcCCCCeEEEEEEEecCCChhhHHHHHHHHHHHhhccCCCcceeEEEecCchhhHHHHHH
Q 001714          300 SRFGTNKLKYPLHS---LIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRD  376 (1021)
Q Consensus       300 SThgtNky~~PL~T---LlV~D~~G~giPVAf~Its~ET~edi~~WLr~f~~~v~~k~p~~~Pk~fMTD~d~Ae~nAI~~  376 (1021)
                      +||+||+| .+|++   +++.|+.|+++|+||+++++|+.+.+..+|+.+.+.    .+.. |..||+|.+.++++||++
T Consensus         1 ~T~~tn~~-~~l~~~~~~~~~d~~~~~~~v~~~l~~~e~~~~~~~~l~~~~~~----~~~~-p~~ii~D~~~~~~~Ai~~   74 (93)
T PF10551_consen    1 GTYKTNKY-GPLLYLMIAVGIDGNGRGFPVAFALVSSESEESYEWFLEKLKEA----MPQK-PKVIISDFDKALINAIKE   74 (93)
T ss_pred             Cccccccc-cccceeceEEEEcCCCCEEEEEEEEEcCCChhhhHHHHHHhhhc----cccC-ceeeeccccHHHHHHHHH
Confidence            59999999 77775   999999999999999999999998766444544443    3334 999999999999999999


Q ss_pred             hcCC-CceeehHHHHHHHH
Q 001714          377 VFQC-SVLVSFWRVRHAWH  394 (1021)
Q Consensus       377 VFp~-~~LLC~WHV~KAW~  394 (1021)
                      +||. .+++|.||+.|+|+
T Consensus        75 vfP~~~~~~C~~H~~~n~k   93 (93)
T PF10551_consen   75 VFPDARHQLCLFHILRNIK   93 (93)
T ss_pred             HCCCceEehhHHHHHHhhC
Confidence            9998 69999999999873

This domain is also found in a transposase for the insertion sequence element IS256 in transposon Tn4001 [].

>PF00872 Transposase_mut: Transposase, Mutator family; InterPro: IPR001207 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element

Probab=99.09  E-value=2.5e-11  Score=139.16  Aligned_cols=244  Identities=16%  Similarity=0.189  Sum_probs=173.3

Q ss_pred             CCCHHHHHHHHHHHHcCCChhHHHHHhhhhhhhcCCCCCCCCcccHHHHHHHHHHhhccccccCCchHHhHHHHHHhhCC
Q 001714          181 YISEDLRLRVLSLLHVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQS  260 (1021)
Q Consensus       181 ~ISde~R~~I~~LL~~GIs~~~Il~~ire~~~k~gG~~~R~~llT~qDVrNi~r~~~r~~~~L~~dD~~SV~~WVee~q~  260 (1021)
                      +..++.-+.|.+|-..|+|..+|-+.+.+..    |+.    -+...-|.++...+.           ..+..|-.+-  
T Consensus        98 r~~~~l~~~i~~ly~~G~Str~i~~~l~~l~----g~~----~~S~s~vSri~~~~~-----------~~~~~w~~R~--  156 (381)
T PF00872_consen   98 RREDSLEELIISLYLKGVSTRDIEEALEELY----GEV----AVSKSTVSRITKQLD-----------EEVEAWRNRP--  156 (381)
T ss_pred             hhhhhhhhhhhhhhccccccccccchhhhhh----ccc----ccCchhhhhhhhhhh-----------hhHHHHhhhc--
Confidence            3466778889999999999999988765553    311    145555666544332           2344554331  


Q ss_pred             ceEEeecCCCCCCeeeecccHHHHHHHHHhCCCceEEEecCCCCCc-----cCCceEEEEEEcCCCCeEEEEEEEecCCC
Q 001714          261 YVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNK-----LKYPLHSLIVFNSDKKAIPVAWVIAPSFS  335 (1021)
Q Consensus       261 ~vF~yqd~sd~d~FvlgIqT~~Q~~~L~rfG~~gVV~lDSThgtNk-----y~~PL~TLlV~D~~G~giPVAf~Its~ET  335 (1021)
                                                |....- -+|.+|+||-.-+     -+-.+++++|+|..|+-.++++.+...|+
T Consensus       157 --------------------------L~~~~y-~~l~iD~~~~kvr~~~~~~~~~~~v~iGi~~dG~r~vLg~~~~~~Es  209 (381)
T PF00872_consen  157 --------------------------LESEPY-PYLWIDGTYFKVREDGRVVKKAVYVAIGIDEDGRREVLGFWVGDRES  209 (381)
T ss_pred             --------------------------cccccc-cceeeeeeecccccccccccchhhhhhhhhcccccceeeeecccCCc
Confidence                                      111100 1689999986443     35688999999999999999999998887


Q ss_pred             hhhHHHHHHHHHHHhhccCCCcceeEEEecCchhhHHHHHHhcCC-CceeehHHHHHHHHHHHhhhccchhhHHHHHHHH
Q 001714          336 SADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRDVFQC-SVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCL  414 (1021)
Q Consensus       336 ~edi~~WLr~f~~~v~~k~p~~~Pk~fMTD~d~Ae~nAI~~VFp~-~~LLC~WHV~KAW~knL~kk~~~~e~r~eVyk~L  414 (1021)
                      ...   |. .||..+++++ --.|..|++|.......||+++||. ++..|.+|..|+..+++.+     ..+.++...|
T Consensus       210 ~~~---W~-~~l~~L~~RG-l~~~~lvv~Dg~~gl~~ai~~~fp~a~~QrC~vH~~RNv~~~v~~-----k~~~~v~~~L  279 (381)
T PF00872_consen  210 AAS---WR-EFLQDLKERG-LKDILLVVSDGHKGLKEAIREVFPGAKWQRCVVHLMRNVLRKVPK-----KDRKEVKADL  279 (381)
T ss_pred             cCE---ee-ecchhhhhcc-ccccceeeccccccccccccccccchhhhhheechhhhhcccccc-----ccchhhhhhc
Confidence            653   43 3445554432 1257889999999999999999997 6999999999876666643     3456777888


Q ss_pred             HHHHhhhcCCCChHHHHHHHHHHhc-CchHHHHHHHHhcccchhhhhhhhccCCC---CCCCCChHHHHhhHHHhhhh
Q 001714          415 GVAVDDICKGHGTIALFENCMEDFM-DGSDFMDYFKAVWYPRIGAWITVLKTLPL---ASQETSAAMEFYHNQLKVRL  488 (1021)
Q Consensus       415 ~~Lv~~tte~~~~~e~~e~f~e~f~-d~~~F~~YFks~Wlpr~e~WA~~yR~~P~---ag~~TNN~iES~H~~LK~~y  488 (1021)
                      ..+....+.+ .+.+.+++|.+.|. .+|.+.++++..|-.....    |+ +|.   ..+.|||.+|++|+.||+..
T Consensus       280 k~I~~a~~~e-~a~~~l~~f~~~~~~kyp~~~~~l~~~~~~~~tf----~~-fP~~~~~~i~TTN~iEsln~~irrr~  351 (381)
T PF00872_consen  280 KAIYQAPDKE-EAREALEEFAEKWEKKYPKAAKSLEENWDELLTF----LD-FPPEHRRSIRTTNAIESLNKEIRRRT  351 (381)
T ss_pred             cccccccccc-hhhhhhhhcccccccccchhhhhhhhccccccce----ee-ecchhccccchhhhccccccchhhhc
Confidence            8877766654 56778999999886 6899999999888653322    22 232   36789999999999999743

Transposases have been grouped into various families [, , ]. The mutator family of transposases consists of a number of elements that include, mutator from maize, IsT2 from Thiobacillus ferrooxidans, Is256 from Staphylococcus aureus, Is1201 from Lactobacillus helveticus, Is1081 from Mycobacterium bovis, IsRm3 from Rhizobium meliloti and others. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated

>COG3328 Transposase and inactivated derivatives [DNA replication, recombination, and repair]

Probab=97.54  E-value=0.00053  Score=79.25  Aligned_cols=177  Identities=11%  Similarity=0.036  Sum_probs=119.7

Q ss_pred             ceEEEecCCCCCc--cCCceEEEEEEcCCCCeEEEEEEEecCCChhhHHHHHHHHHHHhhccCCCcceeEEEecCchhhH
Q 001714          294 SLLASDSRFGTNK--LKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADV  371 (1021)
Q Consensus       294 gVV~lDSThgtNk--y~~PL~TLlV~D~~G~giPVAf~Its~ET~edi~~WLr~f~~~v~~k~p~~~Pk~fMTD~d~Ae~  371 (1021)
                      .++.+|++|---+  -+-.+|..++++..|+--..++.+...|. .-...||..|..+  .+   .....+++|.-...-
T Consensus       146 ~~v~~D~~~~k~r~v~~~~~~ia~Gv~~eG~reilg~~~~~~e~-~~w~~~l~~l~~r--gl---~~v~l~v~Dg~~gl~  219 (379)
T COG3328         146 PYVYLDAKYVKVRSVRNKAVYIAIGVTEEGRREILGIWVGVRES-KFWLSFLLDLKNR--GL---SDVLLVVVDGLKGLP  219 (379)
T ss_pred             eEEEEecceeehhhhhhheeeeeeccCcccchhhhceeeecccc-hhHHHHHHHHHhc--cc---cceeEEecchhhhhH
Confidence            3789999996655  45688889999999999999999999988 4333344444333  11   134557779999999


Q ss_pred             HHHHHhcCC-CceeehHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhc-CchHHHHHHH
Q 001714          372 HTIRDVFQC-SVLVSFWRVRHAWHKNLVKRCSEIGMRAEIFRCLGVAVDDICKGHGTIALFENCMEDFM-DGSDFMDYFK  449 (1021)
Q Consensus       372 nAI~~VFp~-~~LLC~WHV~KAW~knL~kk~~~~e~r~eVyk~L~~Lv~~tte~~~~~e~~e~f~e~f~-d~~~F~~YFk  449 (1021)
                      +||..+||. .+..|..|..++....+..     ..+.++...+..+....+.+ .....|..+.+.|. ..|.-.....
T Consensus       220 ~aI~~v~p~a~~Q~C~vH~~Rnll~~v~~-----k~~d~i~~~~~~I~~a~~~e-~~~~~~~~~~~~w~~~yP~i~~~~~  293 (379)
T COG3328         220 EAISAVFPQAAVQRCIVHLVRNLLDKVPR-----KDQDAVLSDLRSIYIAPDAE-EALLALLAFSELWGKRYPAILKSWR  293 (379)
T ss_pred             HHHHHhccHhhhhhhhhHHHhhhhhhhhh-----hhhHHHHhhhhhhhccCCcH-HHHHHHHHHHHhhhhhcchHHHHHH
Confidence            999999997 6999999999865555543     34455555555544444332 34556777776664 4556555555


Q ss_pred             HhcccchhhhhhhhccCCCC---CCCCChHHHHhhHHHhhh
Q 001714          450 AVWYPRIGAWITVLKTLPLA---SQETSAAMEFYHNQLKVR  487 (1021)
Q Consensus       450 s~Wlpr~e~WA~~yR~~P~a---g~~TNN~iES~H~~LK~~  487 (1021)
                      +.|.....    .+. +|..   .+.|+|.+|++|+.+++.
T Consensus       294 ~~~~~~~~----F~~-fp~~~r~~i~ttN~IE~~n~~ir~~  329 (379)
T COG3328         294 NALEELLP----FFA-FPSEIRKIIYTTNAIESLNKLIRRR  329 (379)
T ss_pred             HHHHHhcc----ccc-CcHHHHhHhhcchHHHHHHHHHHHH
Confidence            55544221    222 3332   478999999999988864

>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants

Probab=97.11  E-value=0.0013  Score=60.48  Aligned_cols=70  Identities=26%  Similarity=0.394  Sum_probs=46.4

Q ss_pred             CCCccccceEEEEEEeeccCCCccCCCCccccCcccccccccCCCCCCCCCCceeEEEEEEeecCCcEEEEEEecccccC
Q 001714           78 SCKPKVDGILEYILYWCSFGPDDHRKGGIVRPSRTTYVPKKKNAGRPNTKRGCTCHFIVKRLIAEPSVALIIYNDEKHVD  157 (1021)
Q Consensus        78 ~~~~~~d~~ley~~Y~Cs~Gp~~~~~gg~~rps~~~~~~~k~r~~Rp~~k~GC~A~f~Vkrl~~~gsv~vii~~~~~Hvh  157 (1021)
                      ..+.+.++...+..|.|++       +|..++..+.  ..+++..++.+++||+|+|.|++.. ++ -|++.-...+|+|
T Consensus        19 s~~~~~~~~~~~~~~~C~r-------~G~~~~~~~~--~~~~~r~~~s~ktgC~a~i~v~~~~-~~-~w~v~~~~~~HNH   87 (91)
T PF03101_consen   19 SRKSKKNGEIKRVTFVCSR-------GGKYKSKKKN--EEKRRRNRPSKKTGCKARINVKRRK-DG-KWRVTSFVLEHNH   87 (91)
T ss_pred             eEeCCCCceEEEEEEEECC-------cccccccccc--cccccccccccccCCCEEEEEEEcc-CC-EEEEEECcCCcCC
Confidence            3344678888999999994       3333333211  2234557788999999999999854 44 4555544456988


Q ss_pred             C
Q 001714          158 K  158 (1021)
Q Consensus       158 ~  158 (1021)
                      +
T Consensus        88 ~   88 (91)
T PF03101_consen   88 P   88 (91)
T ss_pred             C
Confidence            6

It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain.

>PF15299 ALS2CR8: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8

Probab=96.03  E-value=0.041  Score=59.74  Aligned_cols=138  Identities=23%  Similarity=0.365  Sum_probs=84.1

Q ss_pred             EEEEeeccCCCccCCCCccccCc----c-cccccccCCCCCCCCCCceeEEEEEEeecCCcEEEEE--------------
Q 001714           89 YILYWCSFGPDDHRKGGIVRPSR----T-TYVPKKKNAGRPNTKRGCTCHFIVKRLIAEPSVALII--------------  149 (1021)
Q Consensus        89 y~~Y~Cs~Gp~~~~~gg~~rps~----~-~~~~~k~r~~Rp~~k~GC~A~f~Vkrl~~~gsv~vii--------------  149 (1021)
                      ...|.|++|++.+.....-+-.+    . ...+++++...+.++.+|||.|.++....-|.+.+..              
T Consensus        34 ~~~~~Cq~G~dr~~~~~~k~~~~~~~~~~~~~~~~~~~~~~skK~~CPA~I~Ik~I~~FPdykv~~~~~~~~~~~r~~~~  113 (225)
T PF15299_consen   34 TKVYECQHGKDRNKKRKKKRKSQKNRDEEDKSKKKRRRSKPSKKRDCPARIYIKEIIKFPDYKVPTNSQKDTRRERRKAS  113 (225)
T ss_pred             ceEEEeeCCCccchhhhhhhhhhccccccccccccccccccccCCCCCeEEEEEEEEEcCCcccccchhhhhHHHHHHHH
Confidence            35677999999994221111111    0 1112344455677899999999999877777666653              


Q ss_pred             -------------------E----ecccccCCCCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHcCCCh-hHHHH
Q 001714          150 -------------------Y----NDEKHVDKNGLPCHGPQDKKAAGTRAMFAPYISEDLRLRVLSLLHVGVSV-ETIMQ  205 (1021)
Q Consensus       150 -------------------~----~~~~Hvh~~~~~cH~p~d~~a~gp~a~~~p~ISde~R~~I~~LL~~GIs~-~~Il~  205 (1021)
                                         |    ...+|.+|.       ....++    .....|.+...+.|.+|+..|++. .+|.+
T Consensus       114 ~~lk~~l~~~~~~~~~~r~yv~lP~~~~H~~H~-------~~~~~~----~~~q~~~~~v~~ki~eLv~~gv~~v~e~k~  182 (225)
T PF15299_consen  114 KKLKKALLSGKSIEGERRFYVQLPSPEEHSGHP-------IGQEAA----GLKQPLDPRVVEKIHELVAQGVTSVPEMKR  182 (225)
T ss_pred             HHHHHHHhcCCCCCceEEEEEECCChHhcCCCc-------cccccc----cccccCCHHHHHHHHHHHHcccccHHHHHH
Confidence                               1    112232221       000011    244568888999999999999886 45666


Q ss_pred             Hhhhhhhhc-------CCCCCCCCcccHHHHHHHHHHhh
Q 001714          206 RHNESVERQ-------GGPCNRDDLLTHRYVRRQERSIR  237 (1021)
Q Consensus       206 ~ire~~~k~-------gG~~~R~~llT~qDVrNi~r~~~  237 (1021)
                      .++..+...       .-..+|...+|.+||+|.+....
T Consensus       183 ~l~~fV~~~lf~~~~~p~~~n~~y~Pt~~di~n~~~~~~  221 (225)
T PF15299_consen  183 HLKKFVEEELFKDQEPPPPTNRRYFPTDKDIRNHMYSAK  221 (225)
T ss_pred             HHHHHhhhhccCCCCCCCCCccccCCchHHHHHHHHHHH
Confidence            554443331       22346778899999999987654

>smart00575 ZnF_PMZ plant mutator transposase zinc finger

Probab=94.50  E-value=0.022  Score=42.38  Aligned_cols=24  Identities=29%  Similarity=0.631  Sum_probs=20.8

Q ss_pred             eeecc-CcccCccchhHHHHHHhhc
Q 001714          582 ICNCS-WAEMGYLCEHLLKVIIVCR  605 (1021)
Q Consensus       582 ~CsC~-~~~~G~lCkHilkV~~~~~  605 (1021)
                      +|+|. |...|++|.|+++|+...+
T Consensus         2 ~CsC~~~~~~gipC~H~i~v~~~~~   26 (28)
T smart00575        2 TCSCRKFQLSGIPCRHALAAAIHIG   26 (28)
T ss_pred             cccCCCcccCCccHHHHHHHHHHhC
Confidence            69998 6899999999999988643

>PF04434 SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.44  E-value=0.071  Score=42.24  Aligned_cols=26  Identities=23%  Similarity=0.653  Sum_probs=21.5

Q ss_pred             CcceeeeccC-cccCccchhHHHHHHh
Q 001714          578 SQFGICNCSW-AEMGYLCEHLLKVIIV  603 (1021)
Q Consensus       578 se~~~CsC~~-~~~G~lCkHilkV~~~  603 (1021)
                      .....|+|.. .+.|.+|+|+++|+..
T Consensus        12 ~~~~~CsC~~~~~~~~~CkHi~av~~~   38 (40)
T PF04434_consen   12 IEQASCSCPYFQFRGGPCKHIVAVLLA   38 (40)
T ss_pred             ccccEeeCCCccccCCcchhHHHHHHh
Confidence            4557999995 6699999999998763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the SWIM (SWI2/SNF2 and MuDR) zinc-binding domain, which is found in a variety of prokaryotic and eukaryotic proteins, such as mitogen-activated protein kinase kinase kinase 1 (or MEKK1). It is also found in the related protein MEX (MEKK1-related protein X), a testis-expressed protein that acts as an E3 ubiquitin ligase through the action of E2 ubiquitin-conjugating enzymes in the proteasome degradation pathway; the SWIM domain is critical for MEX ubiquitination []. SWIM domains are also found in the homologous recombination protein Sws1 [], as well as in several hypothetical proteins. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>PF01610 DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element

Probab=92.45  E-value=0.2  Score=54.15  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=63.0

Q ss_pred             EEecCCCCCccCCceEEEEEEcCCC-CeEEEEEEEecCCChhhHHHHHHHHHHHhhccCCCcceeEEEecCchhhHHHHH
Q 001714          297 ASDSRFGTNKLKYPLHSLIVFNSDK-KAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSADVHTIR  375 (1021)
Q Consensus       297 ~lDSThgtNky~~PL~TLlV~D~~G-~giPVAf~Its~ET~edi~~WLr~f~~~v~~k~p~~~Pk~fMTD~d~Ae~nAI~  375 (1021)
                      +||=+.....++.  |..++.|-.. .+-++  .++.+.+.+.+..||..++.   . ...-.+++|.+|...++..|++
T Consensus         2 giDE~~~~~g~~~--y~t~~~d~~~~~~~il--~i~~~r~~~~l~~~~~~~~~---~-~~~~~v~~V~~Dm~~~y~~~~~   73 (249)
T PF01610_consen    2 GIDEFAFRKGHRS--YVTVVVDLDTDTGRIL--DILPGRDKETLKDFFRSLYP---E-EERKNVKVVSMDMSPPYRSAIR   73 (249)
T ss_pred             eEeeeeeecCCcc--eeEEEEECccCCceEE--EEcCCccHHHHHHHHHHhCc---c-ccccceEEEEcCCCcccccccc
Confidence            4566555554553  5556666522 23333  36677777777777655421   1 1123789999999999999999


Q ss_pred             HhcCC-CceeehHHHHHHHHHHH
Q 001714          376 DVFQC-SVLVSFWRVRHAWHKNL  397 (1021)
Q Consensus       376 ~VFp~-~~LLC~WHV~KAW~knL  397 (1021)
                      +.||+ .+.+-.|||.+...+.+
T Consensus        74 ~~~P~A~iv~DrFHvvk~~~~al   96 (249)
T PF01610_consen   74 EYFPNAQIVADRFHVVKLANRAL   96 (249)
T ss_pred             ccccccccccccchhhhhhhhcc
Confidence            99998 68999999999776644

Transposases have been grouped into various families [, , ]. This family includes the IS204 [], IS1001 [], IS1096 [] and IS1165 [] transposases. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated

>PF03050 DDE_Tnp_IS66: Transposase IS66 family ; InterPro: IPR004291 Transposase proteins are necessary for efficient DNA transposition

Probab=86.60  E-value=0.91  Score=49.94  Aligned_cols=82  Identities=16%  Similarity=0.140  Sum_probs=49.2

Q ss_pred             eEEEecCCCC-----CccCCceEEEEEEcCCCCeEEEEEEEecCCChhhHHHHHHHHHHHhhccCCCcceeEEEecCchh
Q 001714          295 LLASDSRFGT-----NKLKYPLHSLIVFNSDKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDDPSA  369 (1021)
Q Consensus       295 VV~lDSThgt-----Nky~~PL~TLlV~D~~G~giPVAf~Its~ET~edi~~WLr~f~~~v~~k~p~~~Pk~fMTD~d~A  369 (1021)
                      ++++|-|.-.     +.-+.-+.+  +.+..    .+.|.+..+...+.+..+|..           +. .++++|.-.+
T Consensus        69 ~~~~DET~~~vl~~~~g~~~~~Wv--~~~~~----~v~f~~~~sR~~~~~~~~L~~-----------~~-GilvsD~y~~  130 (271)
T PF03050_consen   69 VVHADETGWRVLDKGKGKKGYLWV--FVSPE----VVLFFYAPSRSSKVIKEFLGD-----------FS-GILVSDGYSA  130 (271)
T ss_pred             eeccCCceEEEeccccccceEEEe--eeccc----eeeeeecccccccchhhhhcc-----------cc-eeeecccccc
Confidence            6777777644     222222333  22222    566667666666655555422           22 4689998877


Q ss_pred             hHHHHHHhcCCCceeehHHHHHHHHHHHh
Q 001714          370 DVHTIRDVFQCSVLVSFWRVRHAWHKNLV  398 (1021)
Q Consensus       370 e~nAI~~VFp~~~LLC~WHV~KAW~knL~  398 (1021)
                      +.. +.   +..+..|+-|++|.+.+-+.
T Consensus       131 Y~~-~~---~~~hq~C~AH~~R~~~~~~~  155 (271)
T PF03050_consen  131 YNK-LA---GITHQLCWAHLRRDFQDAAE  155 (271)
T ss_pred             ccc-cc---cccccccccccccccccccc
Confidence            644 22   55799999999987766554

This family includes the bacterial insertion sequence (IS) element, IS66, from Agrobacterium tumefaciens []. IS66 may cause genetic and structural variations of the T region and the vir region of the octopine Ti plasmids []. More information about these proteins can be found at Protein of the Month: Transposase [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1021
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 72.6 bits (177), Expect = 5e-13
 Identities = 70/502 (13%), Positives = 137/502 (27%), Gaps = 152/502 (30%)

Query: 432 ENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHNQLKVR---- 487
           +  +++F D  D  D  K++                L+ +E    +              
Sbjct: 27  DAFVDNF-DCKDVQDMPKSI----------------LSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 488 LLNEKDSGVYQR---------TDWLVDKL---------GTKVHSYFWLDEYTGKDDFARY 529
            L  K   + Q+           +L+  +          T+++       Y     FA+Y
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129

Query: 530 --WKDEWVSGLTCWRKALKILDSD--VVIEGR--CGK---VTDQLDGNKVYVVRNPGSQF 580
              + +    L   R+AL  L     V+I+G    GK     D     KV   +     F
Sbjct: 130 NVSRLQPYLKL---RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV-QCKMD---F 182

Query: 581 GICNCSWAEMGY-------------LCEHLLKVIIVCRKKGSVKPSISLFQYNKALMDML 627
            I    W  +               L  + +      R   S    + +      L  +L
Sbjct: 183 KI---FWLNLKNCNSPETVLEMLQKLL-YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 628 HCTPH-DSLI--RDHAISLAVSIQKQLNASVDFESSQISVASVEKQIVETNEQQTVGTFH 684
              P+ + L+   +      V   K  NA  +            K ++ T  +Q      
Sbjct: 239 KSKPYENCLLVLLN------VQNAKAWNA-FNLSC---------KILLTTRFKQ------ 276

Query: 685 ADQDRELVNEGHCVNDDVSSQKGRNRGEELVASGGTANELAGGLINQL-VSANSL----C 739
                        V D +S+    +   +  +   T +E+   L+  L      L     
Sbjct: 277 -------------VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 740 GGTTEEEISFAKTDVEQSPIYISTPGLVSVDELASSGGFSKNEQRALVSDAEISGYTHSK 799
                            +P  +S       D LA+   +       L         T   
Sbjct: 324 TT---------------NPRRLSIIAESIRDGLATWDNWKHVNCDKL---------TTII 359

Query: 800 DAAVTDQNEAEEGISDKDCHQDLDVEPFTIDMPPPTMEFLEQCTVSPQNGISSLDPQLPV 859
           ++++     AE     +     L V P +  +P   +  +          +   D  + V
Sbjct: 360 ESSLNVLEPAEY----RKMFDRLSVFPPSAHIPTILLSLI-------WFDVIKSDVMVVV 408

Query: 860 --LSNKADADSHSDKASRPMYM 879
             L   +  +    +++  +  
Sbjct: 409 NKLHKYSLVEKQPKESTISIPS 430

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 64.9 bits (157), Expect = 1e-10
 Identities = 62/504 (12%), Positives = 144/504 (28%), Gaps = 168/504 (33%)

Query: 82  KVDGILEYILYWCSFG----PDD---------HR--KGGIVRPSRTTYVPKKKNAGRPNT 126
           KV   +++ ++W +      P+          ++       R   ++ +  + ++ +   
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE- 233

Query: 127 KRGCTCHFIVKRLIAEPSV--ALIIYND---EKHVDKNGLPC------------------ 163
                    ++RL+        L++  +    K  +   L C                  
Sbjct: 234 ---------LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284

Query: 164 ---HGPQDKKAAG-----TRAMFAPYIS---EDLRLRVL--SLLHVGVSVETIMQRHNES 210
              H   D  +        +++   Y+    +DL   VL  +   + +  E+I       
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI------- 337

Query: 211 VERQGGPCNRDDLLTHRYVRRQERSIRRSTYELDLDDAVSINMWVESHQSYVFFYEDFS- 269
              + G     D   H    +    I  S   L+  +          ++     ++  S 
Sbjct: 338 ---RDGL-ATWDNWKHVNCDKLTTIIESSLNVLEPAE----------YRKM---FDRLSV 380

Query: 270 -EYD----PFTLGI---QTEWQLQQMI--RFGNRSLLASDSRFGTNKLKYPLHSLIVFNS 319
                      L +           ++  +    SL+         +    + S+ +   
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP----KESTISIPSIYL--- 433

Query: 320 DKKAIPVAWVIAPSFSSADTHRWMRALYNRVRTKDPTWNLAGFIVDD----------PSA 369
           + K            +    HR +   YN  +T D   +L    +D            + 
Sbjct: 434 ELK--------VKLENEYALHRSIVDHYNIPKTFDS-DDLIPPYLDQYFYSHIGHHLKNI 484

Query: 370 DVHTIRDVFQCSVLVSF-W---RVRH---AWHKNLVKRCSEIGMRAEIFRCLGVAVDDIC 422
           +      +F+  V + F +   ++RH   AW  N          + + ++        IC
Sbjct: 485 EHPERMTLFR-MVFLDFRFLEQKIRHDSTAW--NASGSILNTLQQLKFYK------PYIC 535

Query: 423 KGHGTIALFENCMEDFMDGSDFMDYFKAVWYPRIGAWITVLKTLPLASQETSAAMEFYHN 482
                     N + DF+              P+I   +       + S+ T        +
Sbjct: 536 DNDPKYERLVNAILDFL--------------PKIEENL-------ICSKYT--------D 566

Query: 483 QLKVRLLNEKDSGVYQRTDWLVDK 506
            L++ L+ E D  +++     V +
Sbjct: 567 LLRIALMAE-DEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 4e-09
 Identities = 69/582 (11%), Positives = 158/582 (27%), Gaps = 211/582 (36%)

Query: 201 ETIMQRHNESVERQGGPCNRDDLLTHRYVRRQE--RSIRRSTYELDLDDAVSINMWVESH 258
             + + + E  +R     N + +     V R +    +R++  EL               
Sbjct: 106 SMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLRQALLELR-------------P 149

Query: 259 QSYVFFYEDFSEYDPFTLGIQTEWQLQQMIRFGNRSLLASDSRFGTNKLKYPLHSLIVFN 318
              V              G         ++  G ++ +A D       L Y +   + F 
Sbjct: 150 AKNVLID-----------G---------VLGSG-KTWVALDV-----CLSYKVQCKMDFK 183

Query: 319 SDKKAIPVAWVIAPSFSSADTHRW-MRALYNRVRTKDPTWNLAGFIVDDPSADVHTIRD- 376
                  + W+   +  + ++    +  L   +   DP W        +    +H+I+  
Sbjct: 184 -------IFWL---NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 377 --------VFQCSVLVSFWRVRHAWHKNLVK----RC--------------------SEI 404
                    ++  +LV    + +  +          C                    + I
Sbjct: 234 LRRLLKSKPYENCLLV----LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 405 GMR-----------AEIF-RCLGVAVDD----ICKGH----GTIA--------------- 429
            +              +  + L     D    +   +      IA               
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349

Query: 430 --------LFENCMEDFMDGSDFMDYFK--AVWYPRIGAWIT--VLKTL--PLASQETSA 475
                   + E+ +    + +++   F   +V +P   A I   +L  +   +   +   
Sbjct: 350 VNCDKLTTIIESSLNVL-EPAEYRKMFDRLSV-FPP-SAHIPTILLSLIWFDVIKSDVMV 406

Query: 476 AMEFYHNQLKVRLLNEKDS--------GVYQRTDWLVDKLGTKVHSYFWLDEYTGK---- 523
            +    N+L    L EK           +Y      ++     +H    +D Y       
Sbjct: 407 VV----NKLHKYSLVEKQPKESTISIPSIYLELKVKLENE-YALHRSI-VDHYNIPKTFD 460

Query: 524 -DDFARYWKDEWVSGLTCWRKA--LKILDSDVVIEGRCGKVTDQLDG-NKVYV------- 572
            DD    + D++            LK ++             +++     V++       
Sbjct: 461 SDDLIPPYLDQYF----YSHIGHHLKNIEH-----------PERMTLFRMVFLDFRFLEQ 505

Query: 573 -VRNPGSQFGICNCSWAEMGYLCEHLLKVIIVCRK-KGSVKPSISLF-QYNKALMDMLHC 629
            +R+  +       +W   G +    L  +   +  K  +  +   + +   A++D L  
Sbjct: 506 KIRHDST-------AWNASGSI----LNTLQQLKFYKPYICDNDPKYERLVNAILDFLP- 553

Query: 630 TPHDSLIRDHAISLAVSIQKQLNASVDFESSQISVASVEKQI 671
              ++LI      L   ++  L      E   I      KQ+
Sbjct: 554 KIEENLICSKYTDL---LRIALM----AEDEAI-FEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00